mRNA_Ecto-sp6_S_contig89.17918.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: D8LKG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG6_ECTSI) HSP 1 Score: 868 bits (2242), Expect = 2.080e-310 Identity = 449/465 (96.56%), Postives = 454/465 (97.63%), Query Frame = 1
Query: 598 MNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVLLAASAVTTREAFRMERPRALATKRGGSPSYTVIEGGGNGEWQERQRPQLLQHIQLGGPHDAAVSRSTGDTAVVTNTAGIVDNGGESADVCAVDRGQEEEDVGPRSHLEEEIPKQMATDEQESNNSDLKVFGGVRGGQPAPLRGEVRRINATEDVDGTGSLEEELWGGGSAEMAAVLPPSRTSFKGKLLDMALFYSVPPWLLPVCLLLFFSWVGWFAIFIFGSDWVGVDIFGGDPSAAKGEEGHQAYEDGVSWASVGLAAQAVVITGMGCGPVTLLVRSSGLRGAFLAAVVFQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGAIAAAVGVAF 1992
MNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVLLAASAVTTREAFRMERPRALATKRGGSP YTVIEGGGNGEWQERQRPQLLQH QLGGPHDAAVSRSTGDTAVVTNTA IV NGGESADVC VDRGQEE DVGPRSHLEEEIPKQMAT+E+ESNNSDLK FGGVRGGQPAPLRGEV +I+AT DVDGTGSLEEE WGGGSAEMAAVLPPSRTSFKGKLLDMALFYSVPPWLLPVCLLLFFSWVGWFAIFIFGSDWVGVDIFGGDPSAAKGEEGHQAYEDGVSWASVGLAAQAVVITGMGCGPVTLLVRS+GLRGAFL AVVFQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGAIAAAVGVAF
Sbjct: 1 MNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVLLAASAVTTREAFRMERPRALATKRGGSPPYTVIEGGGNGEWQERQRPQLLQHFQLGGPHDAAVSRSTGDTAVVTNTASIVVNGGESADVCTVDRGQEEGDVGPRSHLEEEIPKQMATNERESNNSDLKAFGGVRGGQPAPLRGEVGKISATVDVDGTGSLEEESWGGGSAEMAAVLPPSRTSFKGKLLDMALFYSVPPWLLPVCLLLFFSWVGWFAIFIFGSDWVGVDIFGGDPSAAKGEEGHQAYEDGVSWASVGLAAQAVVITGMGCGPVTLLVRSAGLRGAFLTAVVFQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGAIAAAVGVAF 465
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: A0A6H5KWC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWC8_9PHAE) HSP 1 Score: 762 bits (1968), Expect = 6.460e-269 Identity = 409/455 (89.89%), Postives = 422/455 (92.75%), Query Frame = 1
Query: 1 MVQAMSSSVSDGGGDVGNRWQQGGHRRQDSRAPRQAGRHGHAGGADARADAPPELTKGQLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQGQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVLLAASAVTTREAFRMERPRALATKRGGSPSYTVIEGGGNGEWQERQRPQLLQHIQLGGPHDAAVSRSTGDTAVVTNTAGIVDNGGESADVCAVDRGQEEEDVGPRSHLEEEIPKQMATDEQESNNSDLKVFGGVRGGQPAPLRGEVRRINATEDVDGTGSLEEELWGGGSAEMAAVLPPSRTSFK 1365
MVQAMSS VSD GGDVGNRWQQGGH RQDSRA RQAGRHGHAGGADA ADA PELTKGQLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLL PVVGVISDHREGQGQRSFFFAVGTIIMAASLALLPAAGAVCRHLTG XXXXXXXXXX SHSEEA GTGLAVFALWALDLAMNASLVAIRA+VADCAPPQQQP+ANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVL+AASAVTTREAFRMERPRALA KRGGSPSYTV+EGG NGEWQERQRPQLLQHIQLGGPHDAAVSRSTGDTA+ TNTA IV GGESADV AVDRGQE+ED+ PRSHLEEEIP QMAT E++SNNSDLK FGGVRGGQPAPLR +VRRI+ATEDVDG GSLEEELWGGGSAEMAA+LPP+ TSFK
Sbjct: 1 MVQAMSSPVSDDGGDVGNRWQQGGHCRQDSRAMRQAGRHGHAGGADAGADARPELTKGQLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLL--------PVVGVISDHREGQGQRSFFFAVGTIIMAASLALLPAAGAVCRHLTG-XXXXXXXXXXXGTSHSEEAVGTGLAVFALWALDLAMNASLVAIRAVVADCAPPQQQPKANTVIIISYGAGTFLGYGFGAVDAAALLGFPPGAFWKSCVDFWVAALVLIAASAVTTREAFRMERPRALAAKRGGSPSYTVVEGGSNGEWQERQRPQLLQHIQLGGPHDAAVSRSTGDTALATNTASIVYIGGESADVSAVDRGQEKEDLAPRSHLEEEIPNQMATSERQSNNSDLKFFGGVRGGQPAPLRRDVRRISATEDVDGAGSLEEELWGGGSAEMAAMLPPTPTSFK 446
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: A0A7S2UUK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUK4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.310e-32 Identity = 86/205 (41.95%), Postives = 120/205 (58.54%), Query Frame = 1
Query: 1390 FYSVPPWLLPVCLLLFFSWVGWFAIFIFGSDWVGVDIFGGDPSAAKGEEGHQAYEDGVSWASVGLAAQAVVITGMGCGPVTLLVRS-SGLRGAFLAAVVFQATCLLIAAFLRPG-----PAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGAIAAAVGV 1986
F+ VP W+ P+C+L+F SWVGW+++ IF S+WVG +FGG G Y+DGV W+S+G A QAVV+ +G GP+ +++ GL A +V QA + FL P P+A AL LV L LG+P AL ++PY+MV S HG LLG+LNV++VLA+L +TL VHPI +L G + A G+
Sbjct: 155 FWDVPRWMAPICILMFCSWVGWYSLLIFSSNWVGAGVFGG-------LAGSGVYQDGVRWSSIGWAVQAVVVILLGAGPLERMIKGVGGLVPALGWSVRSQAALTCMVLFLPPVTRLALPSAKALVLVQLGLLGLPFALIHTVPYVMVAKSSGPSQHGHLLGRLNVYVVLAELFITLTVHPISSIFPGNTLVEILLGIVVTASGL 352
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: Q7KWK4_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q7KWK4_DICDI) HSP 1 Score: 97.8 bits (242), Expect = 3.640e-17 Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 178 LLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGF 756
L+ + LG+ FGWA + +TPLF ++ GV+ + ++WLAGP+SGL+VQ P+VGVI+D E + G+R F +G++ ++ L L+ A T GS S +++ +A+ W LDL+ NA RA++ D A P QQ +++ + G G LGY G++D ++ F
Sbjct: 206 LICLTICFLGVQFGWALQIAFSTPLFLEL-GVEQKWVSYIWLAGPISGLIVQ------PLVGVITDRSECRFGRRKPFILIGSVFISIGLVLISNAE------TFGSYFGD--------SEQKKSIAISIAIVGFWILDLSNNAVQAPCRALLVDIAAPSQQSLGSSLFSLMLGTGNLLGYMMGSIDLVRMVPF 378
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: F0ZL05_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZL05_DICPU) HSP 1 Score: 97.1 bits (240), Expect = 5.070e-17 Identity = 61/197 (30.96%), Postives = 101/197 (51.27%), Query Frame = 1
Query: 178 LLRIAC---GMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGF 756
L R+ C LG+ FGWA + +TPLF ++ GV + ++WLAGP+SGL+VQ P+VGV++D E + G+R F +G+I ++ L L+ A ++ S +++ +A+ W LDL+ NA RA++ D A P QQ +++ + G G LGY G+++ ++ F
Sbjct: 170 LFRLICLTISFLGVQFGWALQIAFSTPLFLEL-GVSQNVVSYIWLAGPISGLIVQ------PLVGVLTDRSESKFGRRKPFILIGSIFISVGLILISNAESI--------------GTWVGDSEGQKSFAIAVAIIGFWILDLSNNAVQAPCRALLVDVAAPSQQSLGSSLFSLMLGIGNLLGYMMGSINLVKVVPF 345
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: D3B0C1_POLPP (Suc1-sucrose proton symporter n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B0C1_POLPP) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-16 Identity = 65/204 (31.86%), Postives = 100/204 (49.02%), Query Frame = 1
Query: 148 DAPPELTKGQLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGF 756
D P ++ +L+ + LG+ FGWA + +TPLF ++ GV + F+W+AGP+SGLLVQ P+VGVISD E + G+R F GT + L L+ A ++ L G S + + +A+ W LDL+ N RA++ D A P QQ +++ + G G +GY G+V + F
Sbjct: 259 DTPSDIPLYKLIALTLSFLGVQFGWALQIAFSTPLFLEL-GVPSFAVSFIWMAGPISGLLVQ------PIVGVISDRLECRYGRRRPFILFGTFFIVVGLMLISNATSI-GELFG-------------DSEASKKMAIIIAIIGFWVLDLSNNTVQSPCRALLVDVASPAQQGLGSSLFSLMLGLGNLIGYFMGSVHLIGVFPF 441
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: A0A2U8N519_BOENI (Sucrose transporter 2 n=1 Tax=Boehmeria nivea TaxID=83906 RepID=A0A2U8N519_BOENI) HSP 1 Score: 95.5 bits (236), Expect = 1.440e-16 Identity = 145/597 (24.29%), Postives = 236/597 (39.53%), Query Frame = 1
Query: 205 GLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTG-----LAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGFP---PGAFWKSCVDFWVAALVLLAASAVTTREAFRMERPRALATKRGGSPSYTVIEGGGNGEWQERQRPQLLQHIQLGGPHDAAVSRSTGDTAVVTNTAGIVDNGGESADVCAVDRGQEEEDVGPRSHLEEEIPKQMATDEQESNNSDLKVFGGVRGGQPAPLRGEVRRINATEDVDGTGSLEEELWGGGSAEMAAVLPPSRTSFKGKLLDMALFYSVPPWLLPVCLLLFFSWVGWFAIFIFGSDWVGVDIFGGDPSAAKGEEGHQAYEDGVSWASVGLAAQAVVITGMGCGPVTLLVRSSGLRGAFLAAVVFQATCLL---IAAFLRPGPAAPAL-------------SLVLLAALGVPLALAESLPYMMVGMFSPRETHGQ--LLGKLNVWIVLAQLALTLCVHP 1914
G+ FGWA + L TP + + G+ A F+WL GP++GL+VQ P VG+ SD + G+R F G+++++AS+ L+ + V +L G + H GT + + W LDLA N RA++AD A P Q+ AN V + G LG+ GA FP A ++C + A LV + + T + L K P + LL + Q G + V +++ A+D G + D M E+++N ++R+NA +EE+ G S AVL TS + +PP + V +++ SW+ WF F+F +DW+G +++ GDP E +AY+ GV + GL +VV+ G+ + + + G R + + C+ I + + G + L SLV+ A LG PLA+ S+P+ + + GQ +G LN+ IV+ Q+ ++L P
Sbjct: 90 GVQFGWALQLSLLTPYIQTL-GIGHAFSSFIWLCGPITGLVVQ------PCVGIWSDKCTSKFGRRRPFILAGSLLISASVVLIGFSADV-GYLLGDTN-----------EHCRTFKGTRTRAAFVFIIGFWLLDLANNTVQGPARALLADLAGPDQRNTANAVFCLWMAVGNILGFSSGA-SGKWHKWFPFLLSRACCEACGNLKAAFLVAVVFLTLCTLVTLYFAKEVPLTAK---EPHHLSDSA------------PLLNNQQQNGLEFSKVK----------------------SEMLAMDGGNGKSD--------------MDGCERDTN---------------------LKRMNA--------KVEEDHNNGFSDSPGAVLVNLLTSLR----------HLPPAMHSVLIVMALSWLSWFPFFLFDTDWMGREVYHGDPKGNSSEV--EAYDQGVREGAFGLLLNSVVL-GISSFLIEPMCQRMGARVVWALSNFIVFACMAGTAIISLISVGEYSKGLEHVIGGNDTIKIASLVVFALLGFPLAITYSVPFSLTAQLTADSGGGQGLAIGVLNLSIVVPQMIISLGAGP 573
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: UPI000644A00F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A00F) HSP 1 Score: 94.0 bits (232), Expect = 1.850e-16 Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 1
Query: 157 PELTKGQLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGF 756
P L +L+ ++ LG+ FGWA + +TP+F + GV + F+W+AGP+SGL+VQ P+VGVISD + G+R F G+I + L L+ A ++ + + ++ LA+ W LDL+ NA RA++ D APP QQ +++ I G G LGY G++ LL F
Sbjct: 34 PLLPLYKLIALSISFLGVQFGWALQMAYSTPMFLQL-GVSRFWVSFIWIAGPVSGLIVQ------PIVGVISDRLVSKYGRRKPFIFFGSICIVLGLMLISNAPSIGAKM--------------GDTPDKQTKAIILAIIGFWILDLSNNAVQSPCRALLVDVAPPAQQGLGSSLFSIMLGIGNLLGYFMGSLSLVGLLPF 213
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: F0XLI8_GROCL (Sucrose transport protein n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XLI8_GROCL) HSP 1 Score: 95.1 bits (235), Expect = 1.900e-16 Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 1
Query: 175 QLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLG 753
+++ + C +G+ F W + TP + G+ FVWLAGP+SG++VQ PVVGVISD G+ G+R F VG I++ +L L + + G H + LAV AL+ +D A+NA++ +R++V D P ++Q E + G +GYG GAVD A LG
Sbjct: 85 RMMLLTCASIGIAFTWGVEMTYCTPYMLSL-GLTKGQASFVWLAGPISGMIVQ------PVVGVISDQWTGKWGRRRPFIVVGNILVVGALLTLGFTSEIVTAVLGNEGFTLGQGTTAPIPHRKIVIT--LAVLALYVVDFAINAAMSCVRSLVVDTLPIEKQQEGSAWSSRMASFGHLIGYGAGAVDLVAALG 269
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Match: F4PLG0_CAVFA (Sucrose proton symporter n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PLG0_CAVFA) HSP 1 Score: 94.4 bits (233), Expect = 3.920e-16 Identity = 67/195 (34.36%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 175 QLLRIACGMLGLMFGWATKTVLTTPLFRDVYGVDPADLGFVWLAGPLSGLLVQARGHAAPVVGVISDHREGQ-GQRSFFFAVGTIIMAASLALLPAAGAVCRHLTGGSXXXXXXXXXXXXSHSEEAAGTGLAVFALWALDLAMNASLVAIRAIVADCAPPQQQPEANTVIIISYGAGTFLGYGFGAVDAAALLGF 756
+L + LG+ FGWA + +TPLF ++ GV + F+W+AGP+SGL+VQ P+VGV+SD E + G+R F GTI +A L L+ A ++ GS S S++A+ +A+ W LDL+ N RA++ D AP QQ +++ I G G LGY G+++ L F
Sbjct: 251 KLFALTVSFLGVQFGWALQIAFSTPLFLEL-GVPSFWVSFIWMAGPISGLIVQ------PIVGVVSDVSESKHGRRRPFIFFGTIFIAVGLLLVSNAQSI------GSIFG---------SDSKDAS-IFIAIIGFWILDLSNNVVQAPCRALLVDVAPTSQQGLGSSLFSIMLGIGNLLGYFMGSLNLVKALPF 422 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17918.1 >prot_Ecto-sp6_S_contig89.17918.1 ID=prot_Ecto-sp6_S_contig89.17918.1|Name=mRNA_Ecto-sp6_S_contig89.17918.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=708bp MVQAMSSSVSDGGGDVGNRWQQGGHRRQDSRAPRQAGRHGHAGGADARADback to top mRNA from alignment at Ecto-sp6_S_contig89:122748..132394+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17918.1 ID=mRNA_Ecto-sp6_S_contig89.17918.1|Name=mRNA_Ecto-sp6_S_contig89.17918.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9647bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:122748..132394+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:122748..132394+ >mRNA_Ecto-sp6_S_contig89.17918.1 ID=mRNA_Ecto-sp6_S_contig89.17918.1|Name=mRNA_Ecto-sp6_S_contig89.17918.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2124bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:122748..132394+ (Ectocarpus species6 EcLAC_371)back to top |