mRNA_Ecto-sp6_S_contig88.17900.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI) HSP 1 Score: 573 bits (1476), Expect = 7.670e-203 Identity = 327/361 (90.58%), Postives = 331/361 (91.69%), Query Frame = 1
Query: 34 ILYESSRRRCRLRLDHFAGCCEAFERPEDRHHYAGEHRRGLDEGGPEEANDLHGSERSEPSGPSWRRTATRWQDKSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQDLAEIDSASVEISLFAAERPNEGNFRASATCGCSEAGRERLLGFPRGGSGDVEGGAGGRADRVRVGASGGGGVGARAAKIREARMTAGQKKAELDALGVSY---------------AEDEKKEKEEEAASPAGEDAADEVSAMRVSAIKKELDERGVRCRGLFEKSEFVDLLVDARAKGITAP 1068
+ ESSRRRCRLR+DHFAGCCEAFERPEDRH Y GEHRRGLDE GPEEANDLHGSERSEPSGPSWRRTATRWQDKSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVRE LES EQDLAEIDSASV+ISLFAAERPNEGN RASATCGCSEAGRERLLGFPRGGSGDVEGGAGGRADR RVGASGGGGVGARAAKIREARMTAGQ KAELDALGVSY AEDEKKEK EEAASPAGEDAADE SAM VSAIK+ELDERGVR RGLFEKSEFVDLLVDARAKGITAP
Sbjct: 10 VEQESSRRRCRLRVDHFAGCCEAFERPEDRHRYDGEHRRGLDEDGPEEANDLHGSERSEPSGPSWRRTATRWQDKSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQQLATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREGLESCEQDLAEIDSASVDISLFAAERPNEGNLRASATCGCSEAGRERLLGFPRGGSGDVEGGAGGRADRFRVGASGGGGVGARAAKIREARMTAGQIKAELDALGVSYVSLLEKSEFVMKLAEAEDEKKEKXEEAASPAGEDAADEASAMLVSAIKEELDERGVRYRGLFEKSEFVDLLVDARAKGITAP 370
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7FUJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ2_ECTSI) HSP 1 Score: 153 bits (387), Expect = 6.780e-39 Identity = 94/133 (70.68%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 262 FREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQDLAEIDSASVEISLFAAERPNEGNFRASATC 657
REE ALRA ID+VEE+AASDRET ARTEGD V L TAEG IAALTETV EQ LA QRESERS L+LRLV + S QEAA +RASTLAVRE+LES+EQDL++ DSASV++SLFAAER NEG+F TC
Sbjct: 94 LREEAGALRATIDYVEESAASDRETWARTEGDLVEKLDTAEGAIAALTETVAEQQLAAQRESERSQLALRLVVGELDVSQQEAAMSRASTLAVREELESWEQDLSDTDSASVDVSLFAAERTNEGHFLEPVTC 226
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G5N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N0_ECTSI) HSP 1 Score: 110 bits (274), Expect = 5.250e-23 Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 256 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQ 564
K FR+EVEALRA +D+V ETAASD ETSARTEGD V L TAEG +AALT+TV EQ LA Q+ESERS+LSLRLVE QEAA ARASTLAV E+L EQ
Sbjct: 92 KYFRDEVEALRATVDYVLETAASDHETSARTEGDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSELSLRLVE-------QEAATARASTLAVEEELSEAEQ 188
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI) HSP 1 Score: 110 bits (276), Expect = 9.110e-23 Identity = 71/104 (68.27%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 256 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQ 564
K FR+EVEALRA +D+V ETAASD ETSARTEGD + L TAEG +AALT+TV EQ LA Q+ESERSDLSLRLVE QEAA ARASTLA+ E+L EQ
Sbjct: 314 KYFRDEVEALRATVDYVLETAASDHETSARTEGDLIAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVE-------QEAAMARASTLAIEEELSEAEQ 410
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.770e-22 Identity = 100/183 (54.64%), Postives = 102/183 (55.74%), Query Frame = 1
Query: 781 VGARAAKIREARMTAGQKKAELDALGVSYA-------------------------EDEKKEKEEEAASP----------------------------AGEDAADEVSAMRVSAIKKELDERGVRCRGLFEKSEFVDLLVDARAKGITAPXXXXXXXXXXXXXXXXXASAQAQDKAGAANKDVE 1170
V A+AAKIREARMTAGQ KAELDALGV Y E E + E AGEDAADEVSAMRVSAIKKELDERGV RGLFEKSEFVDLLVDARAKGITAP XXXXXXXXXXXX QDKA AA KDVE
Sbjct: 525 VDAQAAKIREARMTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEDAADEVSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAPPPSSSXXXXXXXXXXXXXXXXXQDKADAAYKDVE 707
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: A0A6H5KUZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ2_9PHAE) HSP 1 Score: 108 bits (270), Expect = 6.680e-22 Identity = 71/87 (81.61%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 910 PAGEDAADEVSAMRVSAIKKELDERGVRCRGLFEKSEFVDLLVDARAKGITAPXXXXXXXXXXXXXXXXXASAQAQDKAGAANKDVE 1170
PAGEDA DEVSAMR+SAIKKELDERGV RGLFEKSEFVDLLVDARAKGITAP XXXXXXXX SAQAQDKA AA KDVE
Sbjct: 684 PAGEDATDEVSAMRISAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAPPPSSSGDTXXXXXXXXGVSAQAQDKADAAYKDVE 770
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.080e-21 Identity = 71/104 (68.27%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 256 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQ 564
K FR+EVEALR +D+V ETAASD ETSARTE D V L TAEG +AALT+TV EQ LA Q+ESE+SDLSLRLVE QEAAKARASTLAV E+L EQ
Sbjct: 346 KYFRDEVEALRVTVDYVLETAASDHETSARTESDLVEKLDTAEGIVAALTDTVAEQQLAAQKESEQSDLSLRLVE-------QEAAKARASTLAVGEELSEAEQ 442
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G5M8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M8_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 1.190e-15 Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 934 EVSAMRVSAIKKELDERGVRCRGLFEKSEFVDLLVDARAKGITAPXXXXXXXXXXXXXXXXXASAQAQDKAGAANKDVE 1170
+VSAMRVSAIK+ELDERGV RGLF+KSEFVDLLVDARA+GITAP XXXXX QDKA AA KDVE
Sbjct: 18 QVSAMRVSAIKEELDERGVGYRGLFDKSEFVDLLVDARAEGITAPPLSSSGDTDGGAXXXXXXXXXXQDKADAAYKDVE 96
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: A0A6H5JBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW0_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 2.090e-15 Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 265 REEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQDLAEIDSASVEISLFAAERPNEGNFRASATCGCSE 669
R+++ AL+ + V TAASD+E SARTEG+ + L TAE TIA+LT+TV EQ LA ESER D +LR +++ + S Q A R +LE E+DLAE+DSASV +SLF AE+ + G+ A TC ++
Sbjct: 130 RKKILALQLTNNKVLSTAASDKERSARTEGELLAKLDTAEYTIASLTDTVAEQQLAAAMESERFDQALRQLDNELQTSRQ----------AARAELELCERDLAEVDSASVSLSLFTAEKSHHGDHLAPTTCSVTQ 255
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 2.820e-13 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 256 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQ-LATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREDLESFEQDLAEIDSASVEISLFAAERPNEGNFRASATCGCSE 669
K R+++ AL+ + V TAASD+E SARTEGD + L TAE TIA LT+TV EQ LA ESER D +LR +++ + + S A R +LE E+DLAE+DSASV +S F E+ + + A TC +E
Sbjct: 232 KKQRKKILALQLTNNKVLSTAASDKERSARTEGDLLAKLDTAEDTIAFLTDTVAEQQLAAAMESERFDQALRQLDN----------ELKTSRRAARAELEFCERDLAEVDSASVSLSRFTVEKTHHEDPLAPMTCPVTE 360 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig88.17900.1 >prot_Ecto-sp6_S_contig88.17900.1 ID=prot_Ecto-sp6_S_contig88.17900.1|Name=mRNA_Ecto-sp6_S_contig88.17900.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=390bp RQTGPARESSRILYESSRRRCRLRLDHFAGCCEAFERPEDRHHYAGEHRRback to top mRNA from alignment at Ecto-sp6_S_contig88:627402..631216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig88.17900.1 ID=mRNA_Ecto-sp6_S_contig88.17900.1|Name=mRNA_Ecto-sp6_S_contig88.17900.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3815bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:627402..631216- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:627402..631216- >mRNA_Ecto-sp6_S_contig88.17900.1 ID=mRNA_Ecto-sp6_S_contig88.17900.1|Name=mRNA_Ecto-sp6_S_contig88.17900.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1170bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:627402..631216- (Ectocarpus species6 EcLAC_371)back to top |