mRNA_Ecto-sp6_S_contig88.17899.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig88.17899.1
Unique NamemRNA_Ecto-sp6_S_contig88.17899.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI)

HSP 1 Score: 735 bits (1897), Expect = 1.360e-260
Identity = 455/528 (86.17%), Postives = 461/528 (87.31%), Query Frame = 1
Query:    1 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTCHMSDASTTXXXXXXXXXXXXXXXDRSISDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDAASDRTVTGVDTVENDTDTAGASEAVDGKEVDDDGGEGDVGIEEDDAYSSGISPPTLDGV 1584
            DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVL FFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKL NTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTE DL+AKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAA ARASTLA+EEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDV+EKA  +ESLAHVAE AVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVED+LTTCHMSDASTT                 S  D XXXXXXXXXXXXXXXXXXXX                                   TVTGVDTVENDTDTAGA EAVD KEV+DDGGEG  GIEEDDAYSSG SPPTLDGV
Sbjct:  178 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLAFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLRNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEGDLIAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAAMARASTLAIEEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVAEKASTVESLAHVAEGAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDELTTCHMSDASTTHA---------------STPDDXXXXXXXXXXXXXXXXXXXX-----------------------------------TVTGVDTVENDTDTAGAGEAVDRKEVNDDGGEGGFGIEEDDAYSSGTSPPTLDGV 655          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7G5N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N0_ECTSI)

HSP 1 Score: 650 bits (1676), Expect = 1.730e-230
Identity = 407/483 (84.27%), Postives = 415/483 (85.92%), Query Frame = 1
Query:  136 MVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTCHMSDASTTXXXXXXXXXXXXXXXDRSISDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDAASDRTVTGVDTVENDTDTAGASEAVDGKEVDDDGGEGDVGIEEDDAYSSGISPPTLDGV 1584
            MVVAKQEQQERVL FFRSLPGAV DYVSTTSLDAARRSNALKAEIVKL NTVKDLTRTVHEKELISTAQASALTA+QAKS+ADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTE DLVAKLDTAEGIVAALTDTVAEQQLAAQKESERS+LSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDT KELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADD++EKA  +ESLAHVAE AVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVED+LTTCHMSDASTT                 S  D XXXXXXXXXXXXXXXXXXXX                                   TVTGVDTVENDTDTAGA EAVD KEV+DDGGEG  GIEEDDAYSSG SPPTLDGV
Sbjct:    1 MVVAKQEQQERVLAFFRSLPGAVFDYVSTTSLDAARRSNALKAEIVKLRNTVKDLTRTVHEKELISTAQASALTAQQAKSEADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEGDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSELSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTSKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDIAEKASTVESLAHVAEGAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDELTTCHMSDASTTHA---------------STPDDXXXXXXXXXXXXXXXXXXXX-----------------------------------TVTGVDTVENDTDTAGAGEAVDRKEVNDDGGEGGFGIEEDDAYSSGTSPPTLDGV 433          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE)

HSP 1 Score: 647 bits (1668), Expect = 8.760e-225
Identity = 437/529 (82.61%), Postives = 463/529 (87.52%), Query Frame = 1
Query:    1 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTCHMSDASTTXXXXXXXXXXXXXXXDRSISDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDAASDRTVTGVDTVENDTDTAGASEAVDGKEVDDDGGEGDVGIEEDD-AYSSGISPPTLDGV 1584
            DEKRF K+LAKA KSS SG V+T+R LVEEAATKGFRSVAI+EAA  V KQEQQERVL FFRSLPGAVVDYVSTTSLDAARRSNALKA+IVKL NTV+DLTRT+H+KELISTAQA A  AE+AKS+ADRNEAAAEAKYFRDEVEALR TVDYVLETAASDHETSARTE DLV KLDTAEGIVAALTDTVAEQQLAAQKESE+SDLSLRLVEQEAA ARASTLAV EELSEAEQREIELQCLLDVGTDTRKELEDELALC+TNV+EARAIAESYGADIEDLDSRALAVALALADDVSEKA I+ESLAHVA+ AVLGATPPF++ DRWGSHAGYPMIRSHLEA+QRLVLTTTSTL+EEVSCCEHDKAEAVNR A+TQ+RMKEVEDDL TC M++ S                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SDAAS    T V+T ENDTDTAGA EAVDGK VDDDGGEGDV  EED   +S G +PPTLDGV
Sbjct:  210 DEKRFGKRLAKAIKSSSSGDVETVRELVEEAATKGFRSVAIDEAATAVFKQEQQERVLAFFRSLPGAVVDYVSTTSLDAARRSNALKAKIVKLKNTVEDLTRTLHKKELISTAQAGAFRAERAKSEADRNEAAAEAKYFRDEVEALRVTVDYVLETAASDHETSARTESDLVEKLDTAEGIVAALTDTVAEQQLAAQKESEQSDLSLRLVEQEAAKARASTLAVGEELSEAEQREIELQCLLDVGTDTRKELEDELALCQTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFNDADRWGSHAGYPMIRSHLEAMQRLVLTTTSTLMEEVSCCEHDKAEAVNRAAKTQERMKEVEDDLATCDMNNDSAPGGSSTD-----------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDAASXXXXTDVNTGENDTDTAGAGEAVDGKGVDDDGGEGDVDGEEDAYVFSRGTNPPTLDGV 727          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7FUJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ2_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 2.330e-136
Identity = 258/421 (61.28%), Postives = 297/421 (70.55%), Query Frame = 1
Query:  136 MVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLV-------EQEAATARASTLAVEEEL-----------------------------------------------------------------SEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTCHMSDAS 1182
            MVVAKQ+QQERVLVFFR LPG VVDYVSTTSLDAARRSNALKAEIV L NT ++L RTVH K++ S+AQA  +  E+AKS+ADRN A A+ +Y R+E  ALRAT+DYV E+AASD ET ARTE DLV KLDTAEG +AALT+TVAEQQLAAQ+ESERS L+LRLV       +QEAA +RASTLAV EEL                                                                 S+A  RE+ELQCLLDVG D R ELED+L LCR+NV+EARAI ESYGADIEDLDSRALAVALALA++VSEKA +I+SLAHVA+ AVL  TP FD++DRWGS AGYPM+RSHLEAVQRLVLTT+STLVEEVS CE  KAEA  REA T++R+  V+DDL  C+ SD S
Sbjct:    1 MVVAKQDQQERVLVFFRRLPGVVVDYVSTTSLDAARRSNALKAEIVMLRNTFENLQRTVHRKDVFSSAQADVIRTERAKSEADRNLAGAQMQYLREEAGALRATIDYVEESAASDRETWARTEGDLVEKLDTAEGAIAALTETVAEQQLAAQRESERSQLALRLVVGELDVSQQEAAMSRASTLAVREELESWEQDLSDTDSASVDVSLFAAERTNEGHFLEPVTCPAVDVAKLGVNDRSASHEAAERTWCQVDESKARHREMELQCLLDVGNDMRNELEDDLTLCRSNVDEARAITESYGADIEDLDSRALAVALALANNVSEKALVIDSLAHVAQGAVLRVTPAFDSEDRWGSLAGYPMVRSHLEAVQRLVLTTSSTLVEEVSRCEAAKAEAAGREAETEERVNWVKDDLIACY-SDVS 420          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 2.130e-48
Identity = 165/473 (34.88%), Postives = 219/473 (46.30%), Query Frame = 1
Query:    1 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAATAR------------------------------------------------------------------------------ASTLAVEEE-----LSEAE--QREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTC 1164
            DEKRF +KL KA KSSP   ++ +R LV+EA TKGFRS A++EA   V + + Q +     RSLPGA+   VS +SL  AR S   + +I+                                                     AL+ T + VL TAASD E SARTE DL+AKLDTAE  +A LTDTVAEQQLAA  ESER D +LR ++ E  T+R                                                                              AST   E++     L EAE   RE+EL  LLD G   RK+LED+LAL    ++E +   ++  ADIED+ SR++ +   L +DV++ A  +  LA  A  A          +D  GS   Y MIR+ LEAVQRLVLT TSTL  E+  C+ +KA+A +REA  +++ +E+ED+L  C
Sbjct:  149 DEKRFTRKLTKAMKSSPPSDIELVRALVDEATTKGFRSAAMDEATKAVTRHDDQAKAFAVLRSLPGALARQVSKSSLAVARHSKKQRKKIL-----------------------------------------------------ALQLTNNKVLSTAASDKERSARTEGDLLAKLDTAEDTIAFLTDTVAEQQLAAAMESERFDQALRQLDNELKTSRRAARAELEFCERDLAEVDSASVSLSRFTVEKTHHEDPLAPMTCPVTEVAALGMHDRSAAHEAAQWTCARLHAVQRMVDASTSRWEDDKATYQLQEAEGRDREVELNRLLDAGEKMRKDLEDDLALSEEELDETQTELDACAADIEDISSRSVDLVRTLQEDVAKTAVRVGGLASAAPEA----------EDLDGSD--YDMIRTRLEAVQRLVLTATSTLEAEIFTCQGEKADAGDREAEIEEQRQELEDELAVC 556          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7FRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE6_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 5.830e-47
Identity = 159/473 (33.62%), Postives = 213/473 (45.03%), Query Frame = 1
Query:    1 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAATARASTLA----VEEELSE---------------------------------------------------------------------------------AEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESLAHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVEEVSCCEHDKAEAVNREARTQQRMKEVEDDLTTC 1164
            DEKRF  KL KA KSSP   ++ +R LV+EA TKGFRS A +EA   V K + Q+  +  FRSLPGA V  V+  SL   R SN  + +I+                                                     AL+ T + VL TAASD E SAR E DL AKLDTA   +A+LTDTVAEQQ+AA  E ER + +LR ++ E  T+R +  A     E +L+E                                                                                 A  RE+EL  LLD G + RK+LED+LAL    +++ +  A+S  AD ED+ SR++ +   L +DV + A  +  LA  A  A          +D  GS   Y MIR+ LEAVQRLVLT TSTL  E+  C+ +KA+A +REA  +++ +E+ED+L  C
Sbjct:  133 DEKRFAGKLVKAMKSSPPSDIELVRALVDEATTKGFRSAATDEATKAVTKHDDQQSAIAIFRSLPGAFVRQVAEASLVVTRHSNKQRKKIL-----------------------------------------------------ALQLTNNKVLSTAASDKERSARREGDLRAKLDTAGDTIASLTDTVAEQQMAAAMECERFEQALRQLDNELKTSRQAARAELEFCERDLAEVDSASVSLSLFTAEKSHHGDLLAPKTCPVTHVAALGMHDRSAAHEAAQWTCARLDAVQRMVDASASRWEQDQATCLLKEAGARDREVELNRLLDAGEEIRKDLEDDLALSEEELDDTQTAADSCAADFEDISSRSVDLVRTLQEDVEKTAVRVGGLASAAPEA----------EDLDGSD--YDMIRARLEAVQRLVLTATSTLEAEIFTCQGEKADAGDREAEIEEQRQELEDELAVC 540          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 3.260e-22
Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 1
Query:  409 KYFRDEVEALRATVDYVLETAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVE-------QEAATARASTLAVEEELSEAEQ 699
            K FR+EVEALRA +D+V ETAASD ETSARTE D V  L TAEG +AALT+TV EQQLA Q+ESERSDLSLRLVE       QEAA ARASTLAV E L   EQ
Sbjct:   84 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQQLATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREGLESCEQ 187          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7FUJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ8_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.790e-17
Identity = 60/121 (49.59%), Postives = 66/121 (54.55%), Query Frame = 1
Query:    1 DEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIE-----------------------------------------EAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAA 240
            DEK F KKLA+A K  PSG VDTIR LVEEA TKGFRS+AI+                                          A  VVAKQ+QQE++  FF SLPGAVVDYVSTTSLDAA
Sbjct:   18 DEKCFRKKLAEAMKRCPSGDVDTIRELVEEADTKGFRSIAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATTVVAKQDQQEKIFAFFTSLPGAVVDYVSTTSLDAA 138          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7FIQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.020e-16
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1
Query:   49 PSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRS 249
            PSG V+ +R LVEEA TKGFRS  I+EAA  VAKQ+QQ++V  FFRSLP AVVD+V++TSLD A RS
Sbjct:   36 PSGDVEAVRELVEEATTKGFRSATIDEAANDVAKQDQQKKVFAFFRSLPCAVVDHVTSTSLDIAERS 102          
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Match: D7FRC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC7_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.640e-15
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 1
Query:   49 PSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLVFFRSLPGAVVDYVSTTSLDAARRS 249
            PSG V+ +R LVEEA TKGFRS  I+E A  VAKQ+QQ+ VL FFRSLP AVVD+V++TSLD A RS
Sbjct:   82 PSGDVEAVRELVEEATTKGFRSATIDEDANDVAKQDQQKMVLAFFRSLPCAVVDHVTSTSLDIAERS 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G4D4_ECTSI1.360e-26086.17Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G5N0_ECTSI1.730e-23084.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMQ6_9PHAE8.760e-22582.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUJ2_ECTSI2.330e-13661.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3D5_ECTSI2.130e-4834.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRE6_ECTSI5.830e-4733.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D2_ECTSI3.260e-2270.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUJ8_ECTSI1.790e-1749.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIQ9_ECTSI1.020e-1667.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRC7_ECTSI1.640e-1567.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig88contigEcto-sp6_S_contig88:620155..623312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1587
Hectar predicted targeting categoryother localisation
Exons5
Cds size1572
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig88.17899.1prot_Ecto-sp6_S_contig88.17899.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig88 620170..623312 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350505.645715-UTR-Ecto-sp6_S_contig88:620154..6201691682350505.645715-UTR-Ecto-sp6_S_contig88:620154..620169Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig88 620155..620169 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350505.6565764-CDS-Ecto-sp6_S_contig88:620169..6203391682350505.6565764-CDS-Ecto-sp6_S_contig88:620169..620339Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig88 620170..620339 +
1682350505.6662405-CDS-Ecto-sp6_S_contig88:620874..6209291682350505.6662405-CDS-Ecto-sp6_S_contig88:620874..620929Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig88 620875..620929 +
1682350505.6768696-CDS-Ecto-sp6_S_contig88:621463..6220091682350505.6768696-CDS-Ecto-sp6_S_contig88:621463..622009Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig88 621464..622009 +
1682350505.6866262-CDS-Ecto-sp6_S_contig88:622196..6224171682350505.6866262-CDS-Ecto-sp6_S_contig88:622196..622417Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig88 622197..622417 +
1682350505.6954641-CDS-Ecto-sp6_S_contig88:622732..6233121682350505.6954641-CDS-Ecto-sp6_S_contig88:622732..623312Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig88 622733..623312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig88.17899.1

>prot_Ecto-sp6_S_contig88.17899.1 ID=prot_Ecto-sp6_S_contig88.17899.1|Name=mRNA_Ecto-sp6_S_contig88.17899.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=524bp
MKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQE
RVLVFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLSNTVKDLTRTVH
EKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLE
TAASDHETSARTEDDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSDL
SLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTRKELEDE
LALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVSEKACIIESL
AHVAERAVLGATPPFDNDDRWGSHAGYPMIRSHLEAVQRLVLTTTSTLVE
EVSCCEHDKAEAVNREARTQQRMKEVEDDLTTCHMSDASTTDASTPDDGA
TDDGTTDRSISDSTTDRSISDSTTDRSISDSTTDRSISDSTTDPSISDST
TDPGTSDSTSTSDAASDRTVTGVDTVENDTDTAGASEAVDGKEVDDDGGE
GDVGIEEDDAYSSGISPPTLDGV*
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mRNA from alignment at Ecto-sp6_S_contig88:620155..623312+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig88.17899.1 ID=mRNA_Ecto-sp6_S_contig88.17899.1|Name=mRNA_Ecto-sp6_S_contig88.17899.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3158bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:620155..623312+ (Ectocarpus species6 EcLAC_371)
GACGAGAAGCGCTTCATGAAGAAGCTGGCAAAGGCGACCAAGAGCTCCCC CTCTGGTAGCGTCGACACTATCCGTGGGCTGGTGGAGGAGGCCGCCACGA AGGGCTTCCGCTCCGTCGCCATTGAAGAGGCGGCGATGGTAGTAGCAAAG CAGGAGCAGCAAGAGAGGGTCCTCGTATTCTTTAGGTGAGAGATGTGTGC AGACGCTGCTCGTCTTCCGTCACGTGTATGTTGGTTTGTATTGCCTTCAC ACTGATGGCATGTGGTGTGAGACCCAGTAGTCATCCGTCGCCCCGAAAAG AAGCGGGCAATGAATACCATACGCCAGTGGGGTGCTTCCTGCATGCTTGG GTCTCTCTCTGTTAAAGGGCTGTGGAACAGATGCATTTTCACTGTGCCTT CTCGCTGTGTCTTTTTTTTCCCGTGCAGCACCCCCTCCCCCCCCCGCCCC CAAGTCTTGAGCATGGCTTTGACAGGTTGTTCGTGTATGGTATGTGGTGA ATTCTTCCCGCAGAAGTCCAACAACGGGGTTCGTATTCCGACGAGAGATG GTGCCACGGGCCATCCCCTCCCGTGTGTGCAGTCAGGTCTTGATTCTCCC CCGTACAACTGGAGCACTTTCGTTTCTTACATACTAATACAGCGTCTCAC AACATTTGTCCGTGCTTTCTTGCATGCATCCTGTTTCGGTTTTCATATTA TTATCATTATTTTCGGACAGGAGTCTTCCCGGCGCCGTTGTCGACTACGT CTCGACCACTTCGCTGGATGCTGCGGTAAGTGCTACCTCGCCTGTCATAT GCCGAATGATGCATTGATGATATACAATAGTATAAGGAGGGACAACTGTT GTTGAGAAAAGTACTGAGACACGTGTCCTCCACAGTTCTCGAGAACGCCT CGAGTGGTTGACCTCGCTTGGTGTGTTAGAGTACGGGGTTATTTTCGTTG ATTCGCTGAGTCCTGATACTTATCGTCGGCAAGAGAGCCGAGCAGCCTGC GTTATTGTCCCGTGTGCTGTAGGGTGAGGGAGTGAGCTCAGCGGTTGTAA CAGTGCCAAACCCCTGGGGTAATGTCGACGATGTATCGTGAGATTCCGCT GTATTCAGTTGTGCCCGATGCGTGGAAGCGTTGGAGCGATGTTGCGCCTG AAGTCTTGGTTGGTTACATCGAGAGCATTTTGTTCCCTTGTGGCTGCACC GAAAATCGTTCTTTCGACGTGTCTCCCCTACTAGATACCCCGAACATTCA CCCCATCCTCCCACACCCTCTCCCCCGCGCTGCCTCTCGTCCACCCACCT TACCACCAGAGGCGCTCGAACGCCTTGAAGGCGGAAATTGTCAAGCTGAG CAACACCGTCAAGGACCTCACGAGGACTGTGCACGAGAAGGAGCTCATCT CCACGGCTCAAGCGAGCGCGCTCACGGCGGAGCAGGCCAAGTCCAAGGCG GACCGCAACGAGGCGGCTGCCGAGGCAAAGTACTTCCGTGACGAGGTGGA GGCGCTCCGAGCCACCGTCGATTACGTGCTGGAAACGGCCGCCTCCGACC ACGAGACGTCCGCGAGGACCGAGGACGACCTCGTCGCAAAGCTCGACACC GCCGAGGGCATCGTCGCCGCCCTCACCGACACCGTCGCCGAGCAGCAACT GGCGGCCCAGAAGGAGTCTGAGCGATCGGACCTCTCCCTCCGCCTGGTCG AGCAAGAAGCGGCCACGGCTCGAGCGTCCACGCTCGCTGTAGAAGAGGAG CTGTCTGAAGCTGAGCAGCGCGAGATTGAGCTCCAGTGCCTCCTGGACGT GGGCACGGACACGAGGAAGGAGCTGGAGGATGAACTGGCCTTGTGCCGGA CGAACGTAAGCAGCCGACAAGGGAGTTTTGACAGCAATTCACGCTTGGCA CTGCTACTGATGTCTGTATCGTAGCCTGGCACAACGAGAGCCATACATAC GGCAACCCTTTTTATCCGCCACCAATCTCTCGCTCATCCTCCCTACCCCC GCTGCAACGTCTCGACTGTCGCCACTCGATGTACCGACGTAGGTGAACGA GGCTCGCGCAATCGCTGAGTCCTACGGTGCCGACATCGAGGACCTGGACT CCCGTGCTCTCGCGGTCGCCCTCGCTCTGGCCGACGACGTCTCCGAGAAG GCGTGCATCATCGAAAGCCTGGCCCACGTCGCGGAGAGAGCGGTGCTCGG CGCCACGCCCCCGTTCGACAACGACGACCGTTGGGGCTCGCACGCGGGCT ATCCAATGATCCGGTGCGTGCTGGCGTGCCTTCGATTGCAAATGCAAAGC ACAGGAGTAGCACGTTTCCGTTGGCGTGGTATTGGTGATTGCCGTTAGTT TCGTTGCACGTGCTTGGTGATGGCGATGTTGGTTGTGGTCAATGTTGGGG TGGTCACGTGCCGTCTCGATGACGTGTACAATATGGCAACTACACCGGAT TTTCATGCAGAAACGCATTTTTTTTATGACGTGATTTAATGCTGAACAGT CGCAACCCCCCCCCTCGCCACCGCCGCCGCCGTGCACGCCTCGGCTGCTC TAATGCCGCGCCTTTTACTGTACTGCAGATCCCACTTGGAGGCCGTGCAG CGACTGGTGTTGACGACTACGTCTACCCTTGTGGAGGAGGTATCATGCTG CGAGCACGACAAGGCGGAGGCGGTGAATCGCGAGGCCAGAACGCAACAGA GGATGAAGGAGGTCGAGGACGACCTCACAACCTGCCACATGAGCGACGCC AGCACTACGGACGCCAGCACCCCCGACGACGGCGCCACCGACGACGGCAC CACCGATCGCAGCATCAGCGACAGCACCACCGATCGCAGCATCAGCGACA GCACCACCGATCGCAGCATCAGCGACAGCACCACCGATCGCAGCATCAGC GACAGCACCACCGATCCCAGCATCAGCGACAGCACCACCGATCCCGGCAC CAGCGACAGCACCAGCACCAGCGACGCCGCAAGCGACCGCACCGTGACGG GCGTGGACACCGTTGAGAACGACACGGACACGGCCGGCGCGAGCGAAGCG GTGGACGGAAAGGAGGTCGACGATGACGGCGGCGAGGGGGATGTCGGCAT TGAAGAGGATGACGCCTACAGCAGTGGCATCAGCCCGCCTACCCTAGACG GGGTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:620155..623312+

>mRNA_Ecto-sp6_S_contig88.17899.1 ID=mRNA_Ecto-sp6_S_contig88.17899.1|Name=mRNA_Ecto-sp6_S_contig88.17899.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1572bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:620155..623312+ (Ectocarpus species6 EcLAC_371)
ATGAAGAAGCTGGCAAAGGCGACCAAGAGCTCCCCCTCTGGTAGCGTCGA
CACTATCCGTGGGCTGGTGGAGGAGGCCGCCACGAAGGGCTTCCGCTCCG
TCGCCATTGAAGAGGCGGCGATGGTAGTAGCAAAGCAGGAGCAGCAAGAG
AGGGTCCTCGTATTCTTTAGGAGTCTTCCCGGCGCCGTTGTCGACTACGT
CTCGACCACTTCGCTGGATGCTGCGAGGCGCTCGAACGCCTTGAAGGCGG
AAATTGTCAAGCTGAGCAACACCGTCAAGGACCTCACGAGGACTGTGCAC
GAGAAGGAGCTCATCTCCACGGCTCAAGCGAGCGCGCTCACGGCGGAGCA
GGCCAAGTCCAAGGCGGACCGCAACGAGGCGGCTGCCGAGGCAAAGTACT
TCCGTGACGAGGTGGAGGCGCTCCGAGCCACCGTCGATTACGTGCTGGAA
ACGGCCGCCTCCGACCACGAGACGTCCGCGAGGACCGAGGACGACCTCGT
CGCAAAGCTCGACACCGCCGAGGGCATCGTCGCCGCCCTCACCGACACCG
TCGCCGAGCAGCAACTGGCGGCCCAGAAGGAGTCTGAGCGATCGGACCTC
TCCCTCCGCCTGGTCGAGCAAGAAGCGGCCACGGCTCGAGCGTCCACGCT
CGCTGTAGAAGAGGAGCTGTCTGAAGCTGAGCAGCGCGAGATTGAGCTCC
AGTGCCTCCTGGACGTGGGCACGGACACGAGGAAGGAGCTGGAGGATGAA
CTGGCCTTGTGCCGGACGAACGTGAACGAGGCTCGCGCAATCGCTGAGTC
CTACGGTGCCGACATCGAGGACCTGGACTCCCGTGCTCTCGCGGTCGCCC
TCGCTCTGGCCGACGACGTCTCCGAGAAGGCGTGCATCATCGAAAGCCTG
GCCCACGTCGCGGAGAGAGCGGTGCTCGGCGCCACGCCCCCGTTCGACAA
CGACGACCGTTGGGGCTCGCACGCGGGCTATCCAATGATCCGATCCCACT
TGGAGGCCGTGCAGCGACTGGTGTTGACGACTACGTCTACCCTTGTGGAG
GAGGTATCATGCTGCGAGCACGACAAGGCGGAGGCGGTGAATCGCGAGGC
CAGAACGCAACAGAGGATGAAGGAGGTCGAGGACGACCTCACAACCTGCC
ACATGAGCGACGCCAGCACTACGGACGCCAGCACCCCCGACGACGGCGCC
ACCGACGACGGCACCACCGATCGCAGCATCAGCGACAGCACCACCGATCG
CAGCATCAGCGACAGCACCACCGATCGCAGCATCAGCGACAGCACCACCG
ATCGCAGCATCAGCGACAGCACCACCGATCCCAGCATCAGCGACAGCACC
ACCGATCCCGGCACCAGCGACAGCACCAGCACCAGCGACGCCGCAAGCGA
CCGCACCGTGACGGGCGTGGACACCGTTGAGAACGACACGGACACGGCCG
GCGCGAGCGAAGCGGTGGACGGAAAGGAGGTCGACGATGACGGCGGCGAG
GGGGATGTCGGCATTGAAGAGGATGACGCCTACAGCAGTGGCATCAGCCC
GCCTACCCTAGACGGGGTTTGA
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