mRNA_Ecto-sp6_S_contig88.17898.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig88.17898.1
Unique Name	mRNA_Ecto-sp6_S_contig88.17898.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 2.430e-109
Identity = 167/180 (92.78%), Postives = 170/180 (94.44%), Query Frame = 1

Query:   82 MLLAFGAHGKGINAPANA-TPDNQCCSALLVEDEAGSLDAFGQYRLPPSCGGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKE-QDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 615
            MLLAFGAHGKGINAPANA TP ++CCSALLVE EAGSLD FG+YRLPP CGGELAVACPRLGFNSAAMNDGSMTPSW AFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGE NDNKE QDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGK  K
Sbjct:    1 MLLAFGAHGKGINAPANAITPQDKCCSALLVEGEAGSLDDFGKYRLPPPCGGELAVACPRLGFNSAAMNDGSMTPSWLAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGEPNDNKEEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKDEK 180

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 2.590e-99
Identity = 154/191 (80.63%), Postives = 171/191 (89.53%), Query Frame = 1

Query:   49 MRAWMLLVVLSMLLAFGAHGKGINAPANATPDNQCCSALLVEDEAGSLDAFGQYRLPPSCGGELAVACPRLGFNSAAM-NDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASKM 618
            MRAWMLL+ LS+LL FGAHG  IN PANATP+++CC+ALLVE EAGSLDAFG+YRLP  CGGELAVACP+LGFN+A + NDGSMT SW AFRQQADLRLAPSC  +EWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELND  + D++EILRAVTAQQTALL+AAKPA PK+FYQHV G+QRAYGKA KM
Sbjct:    1 MRAWMLLL-LSVLLTFGAHGMAINGPANATPEDKCCAALLVEGEAGSLDAFGKYRLPTPCGGELAVACPKLGFNAATLHNDGSMTASWLAFRQQADLRLAPSCSPMEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELND--DNDDNEILRAVTAQQTALLKAAKPAMPKSFYQHVAGRQRAYGKARKM 188

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D7FRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE6_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.950e-60
Identity = 101/129 (78.29%), Postives = 108/129 (83.72%), Query Frame = 1

Query:  229 GGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 615
            GGE AVACP+LGFN+AA+ND +MT SW AF+QQ+ LR A SCP  EWE RCPPGA MLLAEKRRGGCRAAGCVAVGGELNDN + DE EILR VTAQQTALLQAAKP  PKTFYQHV GQQRAY K  K
Sbjct:    7 GGESAVACPKLGFNAAAINDDAMTASWLAFQQQSGLRAAESCPPAEWEDRCPPGAIMLLAEKRRGGCRAAGCVAVGGELNDNNKDDEWEILRVVTAQQTALLQAAKPTMPKTFYQHVAGQQRAYAKDEK 135

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: A0A6H5KGK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK1_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.920e-59
Identity = 99/150 (66.00%), Postives = 107/150 (71.33%), Query Frame = 1

Query:  229 GGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELND----------------------NKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKAS 612
            GGE AVACP+LGFN+AA++D +MT SW AF+QQ+ LR A SCP  EWE RCPPGATMLL EKRRGGCRAAGC+A GGELND                      N E DE EILRAVTAQQTALLQAAKP  PKTFYQHV GQQRA G  S
Sbjct:    7 GGEPAVACPKLGFNAAAIHDDAMTASWLAFQQQSGLRAAESCPPTEWEDRCPPGATMLLVEKRRGGCRAAGCIAAGGELNDVRDGSAFPLAVLVCYALVDHGQNNEDDEWEILRAVTAQQTALLQAAKPTLPKTFYQHVAGQQRACGXVS 156

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D8LCE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE6_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 4.670e-49
Identity = 102/196 (52.04%), Postives = 125/196 (63.78%), Query Frame = 1

Query:   49 MRAWMLLVVLSMLLAFGAHGKGINAPANATPDNQCCSALLVEDEAGSLDAFGQYRLPPSCGGELA-VACPRLGFNSAAMNDGSMT--PSWN-AFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKEQD---ESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 615
            MRAW L++   + L   AHG   N     TP+  CC+ALLVE E GSLDA G+YRLP  C G  + V C  LGF     ND +M   P+W  A+R QAD+R  PSC  VEWE+RCPPGATMLL+ K+RGGC AAGCVA   + + N  QD   ++ ILRAVT Q TA L+A KP  P++FY HV G +RA+ K  K
Sbjct:    1 MRAWTLVLACVLPLVL-AHGTEDNP--TITPEGDCCAALLVEGEEGSLDAAGKYRLPAICRGVPSPVTCTPLGFT----NDHNMVEEPAWLLAYRSQADIRQHPSCSPVEWEQRCPPGATMLLS-KKRGGCPAAGCVAATAQESVNVGQDVGDDAAILRAVTGQVTARLRAEKPDLPRSFYWHVRGLRRAFDKGPK 188

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D7G3D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D5_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 6.240e-38
Identity = 86/162 (53.09%), Postives = 108/162 (66.67%), Query Frame = 1

Query:   49 MRAWMLLVVLSMLLAFG-AHGKGINAPANATPDNQCCSALLVEDEAGSLDAFGQYRLPPSCGGELA--VACPRLGFNSAAMNDGSM-TPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVG--GELNDNK-EQDESEILRAVT 513
            MR+W LL+V ++LL  G AHGKG     + T +  CC+ALLVE E GSLDA G+Y LP  C GE A  +ACP+L F S A++D  +  P+  AF+QQ+DLR   SC  +EWE+RCPPGATMLL+ K+RGGCRAAGCVA    GEL     + DE    R +T
Sbjct:    2 MRSWTLLLVCAVLLVLGQAHGKG----RDPTKEEDCCTALLVEGEEGSLDAAGKYVLPTICRGEPAPAMACPQLWFQSPAISDNDIGEPARLAFQQQSDLRADESCSPLEWEQRCPPGATMLLS-KKRGGCRAAGCVAAAMEGELTAQLIDVDEKRFTRKLT 158

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: A0A6H5JU04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU04_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 6.860e-36
Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 1

Query:  229 GGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADL---RLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELND 471
            GGE AVACP+LGFN+AA++D +MT SW AF+QQ+ L   R A SCP  EWE RCPPGATMLLAEKRRGGCRAAGC+A GGELND
Sbjct:    7 GGEPAVACPKLGFNAAAIHDDAMTASWLAFQQQSGLFGLRAAESCPPTEWEDRCPPGATMLLAEKRRGGCRAAGCIAAGGELND 90

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D7G532_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G532_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 4.640e-30
Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1

Query:  163 LLVEDEAGSLDAFGQYRLPPSCGGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASK 615
            LL+E   GS    G+Y+LP +C     V CP LGF+  A     + P+    RQQ+ LR  PSC R EWE RCPP +TMLLA +  G C A GCV    E      +DE E+LR +T++ T  LQA K    K+FY HV G +R++GKA K
Sbjct:   34 LLLEGPVGSKGHDGKYQLPVAC--RDLVGCPSLGFSPQASEHIDIDPASETLRQQSALREDPSCTRAEWEGRCPPSSTMLLASRMAGSCIAEGCVH--RETQSMAGEDEDELLRVITSEVTQRLQAEKRNMTKSFYAHVRGLRRSFGKAQK 180

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: D7FRR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR6_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.140e-28
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1

Query:  166 LVEDEAGSLDAFGQYRLPPSCGGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAPSCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCV------AVGGELNDNKEQDESEILRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKAS 612
            L+E   GS    G+Y+LP +C     V CP LGFN  A  D  + P+  A RQQ+ LR   SCPR EWE RCPP +TMLLA +  G C AAGCV       VGG+          E+LR +T++ T  LQA KP   ++FY HV G +R + K++
Sbjct:   35 LLEGPVGSKGHDGKYQLPVAC--RDLVGCPSLGFNPQAHID--IDPASEALRQQSALREDSSCPRAEWEGRCPPSSTMLLASRMGGSCIAAGCVHRETQSMVGGD---------DELLRVITSEVTERLQAEKPYLTRSFYAHVRGLRRFFAKSN 176

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BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Match: A0A6H5KH23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH23_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.030e-18
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 1

Query:   49 MRAWMLLVVLSMLLAFGAHGKGINAPANATPDNQCCSALLVEDEAGSLDAFGQYRLP 219
            MRAWMLL+ L +LLAFGAHG+ +N P NATP+++CCSALLVE EA SLDA G+YRLP
Sbjct:    1 MRAWMLLL-LFVLLAFGAHGQ-VNGPTNATPEDKCCSALLVEGEAASLDASGKYRLP 55

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig88.17898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D7G4D4_ECTSI	2.430e-109	92.78	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5KMQ6_9PHAE	2.590e-99	80.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRE6_ECTSI	1.950e-60	78.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KGK1_9PHAE	3.920e-59	66.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LCE6_ECTSI	4.670e-49	52.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G3D5_ECTSI	6.240e-38	53.09	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JU04_9PHAE	6.860e-36	73.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G532_ECTSI	4.640e-30	45.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FRR6_ECTSI	1.140e-28	43.87	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5KH23_9PHAE	3.030e-18	71.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig88	contig	Ecto-sp6_S_contig88:608980..619169 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	621
Hectar predicted targeting category	signal peptide
Exons	3
Cds size	573

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350505.5858738-UTR-Ecto-sp6_S_contig88:608979..609027	1682350505.5858738-UTR-Ecto-sp6_S_contig88:608979..609027	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig88 608980..609027 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350505.596105-CDS-Ecto-sp6_S_contig88:609027..609206	1682350505.596105-CDS-Ecto-sp6_S_contig88:609027..609206	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig88 609028..609206 +
1682350505.606084-CDS-Ecto-sp6_S_contig88:609475..609719	1682350505.606084-CDS-Ecto-sp6_S_contig88:609475..609719	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig88 609476..609719 +
1682350505.6164098-CDS-Ecto-sp6_S_contig88:619019..619169	1682350505.6164098-CDS-Ecto-sp6_S_contig88:619019..619169	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig88 619020..619169 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig88.17898.1	prot_Ecto-sp6_S_contig88.17898.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig88 609028..619169 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig88:608980..619169+
coding sequence from alignment at Ecto-sp6_S_contig88:608980..619169+

protein sequence of mRNA_Ecto-sp6_S_contig88.17898.1

>prot_Ecto-sp6_S_contig88.17898.1 ID=prot_Ecto-sp6_S_contig88.17898.1|Name=mRNA_Ecto-sp6_S_contig88.17898.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=191bp
MRAWMLLVVLSMLLAFGAHGKGINAPANATPDNQCCSALLVEDEAGSLDA
FGQYRLPPSCGGELAVACPRLGFNSAAMNDGSMTPSWNAFRQQADLRLAP
SCPRVEWEKRCPPGATMLLAEKRRGGCRAAGCVAVGGELNDNKEQDESEI
LRAVTAQQTALLQAAKPATPKTFYQHVVGQQRAYGKASKM*

mRNA from alignment at Ecto-sp6_S_contig88:608980..619169+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig88.17898.1 ID=mRNA_Ecto-sp6_S_contig88.17898.1|Name=mRNA_Ecto-sp6_S_contig88.17898.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10190bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:608980..619169+ (Ectocarpus species6 EcLAC_371)
GAAAAATAACGCATTGGTTTCTCATGTCTTCCGTTGTCAGAAGAAAAGAT
GAGGGCTTGGATGCTGCTGGTGGTGCTGTCAATGCTCCTCGCGTTCGGAG
CACACGGCAAGGGCATCAACGCGCCCGCCAACGCCACGCCAGACAACCAA
TGCTGCTCTGCTCTGCTGGTGGAGGACGAGGCCGGCTCTCTCGACGCCTT
TGGGCAATACCGCCTGCCGCCTTCTTGGTGAGCGATTGTTGAATTGATTG
CCGCGCTCAGTTGGTCCCGCAGGTATCTAGGTGATCTGTCGGAGTATGAG
AAATACTAGACTACTGTGTAGAGAACGGTAGAGACGTTCAAATGCGTTTG
TTTTGTCGTTGTTTCTGGATGTAAGGGTGCCTGCCGCGCCCTGTCCAACC
AGCCGTCGTCAGTAGATTCTGGTGCAGTCCATGACATGTTCTACACTGCA
CTGTCCGCGTTGTTCCCTGCGGATGTCGCGTGCGTGACTTCTACAGCGGT
GGAGAACTTGCCGTGGCCTGCCCCAGGCTCGGGTTCAACTCGGCGGCAAT
GAACGACGGGTCAATGACCCCTAGCTGGAACGCGTTCCGGCAACAGGCCG
ACCTCCGCCTGGCCCCTTCCTGCCCGCGGGTGGAATGGGAGAAGAGGTGC
CCGCCCGGGGCCACCATGCTCCTGGCGGAGAAGAGGAGGGGCGGGTGCCG
CGCGGCCGGCTGCGTTGCGGTGGGCGGCGAGCTGAACGACGTGAGAGGTT
TTCAGCATTTGTATCTCGCCCGATGTGTGTACAGTGTACAGCCTGCTGTG
ATGATGGGTTTTTTGTTTCGCTCTGCTTCATCTATCTTGAGATTTCATTG
TAGAAGGATGTTTGTGTACTGTAGACGACCGCAGTTCTAGACTATAGCAC
AGTACTCCTACATTTATGGACGTTGCAGGTGGCTTGTGTGGTAGGTGGCA
TGGTGCCTGCTCAACATGAGAGTGTGTACTAGACAAGCCTCTCGTTAGTT
ATCAACGCCTGATGATGCTCGGTCTGCCTGGGTTGTCACACCGCTCAAGA
AATACTGGGTTTGCTCCTTGCACCGCAAGAAAAAATGTTTGAAGTCTGCA
TATCGTACAAAGTAGCTGCACCAGCAAATCAATATACCGTGATTTGTGAA
TGCCACCTCAGACTGTAGTAGATGGTGACGTCAGATGACCTGTCGGAGAT
CTACCTTCGGGGTGTTGCCACAGATAGAGTCAGTTCGGGTGGATGCTGAA
CCTTGCTTCAACACAAGGTCGCTCCCCCCCCTGACTCACAACACAACTAT
CCGTACTCTTCAGCCTCTCCACCAGAGGCTGAACCGGTGTGTATCCACAC
CACACATCCCAAGGGGAACTTGCTCACACGCGAACCTGGATACAACAGTC
TCATAGTGGCGTCAGCGGCGTGCCGTGTGCTGGTTGAGTTCCTGGCACAG
TGGTGGCATTACCTTGCCATCATAATGCCGAAGAAAAAGAAAAAATCGTC
AAGAGGCCACCCGCCCAGAGGAGTGGCAAGATGGAGAACAGCTGGTAGAT
TACGAGCCGGCGTCGTCCGCCGGCCCGCCGTCGCCGTCTCCATCGTCGTC
GTCGTCCCCGTCGTCGAACGACGGGGGGCACCAGTCCGACCACTCATCGG
GAGATGATGATGGGTTGGACCAGATGTCATCCTTGGAGTTGCTTGAAGCA
ACTTGCAAGGCGGAGGTAAAAAATTACCTCCGAGCGTTGAAGCAGGGGCG
GACGCCGCCGGAGCTTTCGCCAGCGACCATCGCTTGGCAACAGCGTCTCC
TGACGGAGTCGGTGGGAAGCTCATCGTCGGTCGCCTCCGCATCGTCGTCG
TCGTCGTCGTCTCGTGGAGCCTCGTCTCGTGGCGCGGATACATCTGCGCG
TACCGTGGTAAGTTCAAGCGTTCCGTTTTTGGCTCCGTCGTTGCCCGGGC
AGACACCGTTGTCCCCCGGAGCACAATCGTTCGTTCCGTCCGCGCAGGCA
ACGAGTGGATCAAATCCCTCGCCGAGTCCGTCGCTCCCTGTGCCCGTAAA
CACGTCTACTTCGGTGTCGTGTACGTCTGGTAGTGCAACCCTCGATAGTT
CAACATCACAGGTTGCACCTGCTAGTGCGCAATCGTCCGTCGTAGAGTCA
CCTGTTACTTCAACATCACAGGTTGAACCTACGCATGCGCAATCGTCCGT
CGTAGCACCGCCTGTTACTTCAACGTCGCAGGTGGCGCCTACTGCTGTAA
CAACCGAACCCCCGTTCGTACGTTTCTACAAGCAGCTACCGTTTCCGTAT
CCGCGGCTGATCTCCGCAGCGTTCCTAAACTCACAGGAGACCGCACCGAA
AATGTCATAGAAATATTGAACCATTTTCGTACCGTGGTTGGGTTGAAAGC
TGCAGCCATCAACCCGGATTCGTCGTTTGCTGATGGGGTCGCCCTTAAAC
ACGTTGCCCTTGTGGGAACAGGGAGGTGTTGACTCTGATTCAGCAGATCT
TGTCGGGACAGATTGACTGTTCTAAGGCAAGTACGTTCACGGAGCCGGAG
GAAAAAGGGTCGTTTCCCTCTCCGACCACGTGGGATGCCATGTGTTCCGT
GTTGCTTGATTCCCTCCTCCCGGCAAATTCCGTCGAGGAGGAGGCACACA
ATCTTGCAACGTTCGTCCAAGGGCCGCAGGAATCTGTTTCCTCGTATGCT
CTTCGTTTCCGTACTGTCATGGCACGGTTCCAAGCTGCCGTCGGTCGTGA
GGGTAGTCGTACTGCTGGGAACTGCATGACAGTGGCTCTGTGGCAAAATG
GGTTGACACCTGAAGTTCGTAAACTTCAACGGGGGTACACTCCCGTAAAG
TCGCTCAAAAGGCCATAGACCGAGCGCGTCGTCTGGAGGAGTCGGAACCC
GTTTTAACTGTTTCGGCAACTCACTCCGTACCGTCTGCCACCGCTCGCCC
CCGGCTGTGTTTCAGGCGCGGCCTACTCAAACGGTGACTTTTAAGAAGTC
ACCTGCCCGCGTCCGTCAACAGCTCGCCGTGGAACGCCCGCCGCTCGTGG
TCGAGGTTCGGGTGGGAGGGGGTCAGCGTCGTCCGTCCTTCGACCCCTGC
ACCCACCCACCTGCCGGTCCCACAAGACCCACCCTATCGAGCGTTGCTGG
GTGCGGCTTGCGGAGGAAGAAGATCGTCAAGGCCGTTCTGCGTCCAAGCG
GTCGAAGAAAAACCGTCGTCCCAAGAAGAAGGACGATTCGTCGGACTCGA
ATAGGGGTGCCCAGGTGTTGTGCCCGCAATGCTTGGGAAGGAATCTGCTG
TTGCCGTCGCAAGTAGCAGTAAGGGCGTGAAAAGATCTTTTGATCGTTTT
GCGTCACTTGCACGTTCGTCCATATCGTCTAGTACTCGGAGTGATAGATC
GTGTTCGAAGAGTACCAAACGACTTGGAAATAAGGCACATGCGTCCCCTG
TCGTAGAACAATCACATAGAAGGCTGGAGCGTTCAATTATCGCAGCCGAT
TTAGACGTGGTTGATAGAGCGTCCCTTGAGGCATCGCGTTTTCGTAAAAA
TGCCGATAAAACAAGGGCCGACAGGATTGTTGCCGTACCGAAGAATGTAT
CGGAGCGTAAGAAGAGGAAGAGGAATTCTGGAGGAATTAAAAAACGTGTT
TCGTGGTACAGCTCAGCGCTGGCGCGGAAAAAACCGTCTTTGTCTCTGTC
TTTTTCGTCCAAACGCGTTCGCGCTCCTGGACATATTGATGGCCAATTTC
TTCCTGAAATCACCATTGATACTGCAAGTGACGTCACGTGCGTTTCACTT
TCGTTTTTGAAACAGCACCCGTCGTTATCGTTCGCTCGTTTAGAGCCCAT
ACCGTCCCCGTCCCTAACACTTAGTGCCGCAAATGGAGCACCCGTCAAAG
TTTTAGGATTTATTTCGTTCGTTGTTCGGTTGGGAGACGTGTCCCGCCGA
ATCGATGCGTTGGTCGTACCATCGCTTGGTCCTGATCAAATACTCCTCGA
CAACGAGGCCATGACCCGGTTTGGGGCAGTACTTGACTGGAAAAATGAAC
GTTTGACTTTTGAGTGTAGTGACACCATTGTCCCCGCTATTCATCGTAAA
AATTCTCAACACGGTGTTGATCCGTCTCCGTCCCCCCGTGTTGCAGCCGT
TCACAGAAATGCGGAAGAACACTCAGTCAAATTACGTCACCGTTATAATA
TTCGCCCTCGTCATGCGATGATTGTAAAAGCATTCACTGAATGCATACCG
TCCGTTGAAACCGCCGTAGTAGTCGAGCCGCGTATATTGTCGGCCGATGA
ACTTTCGTTAGATACTGTTCCGCCCGAATTTGAACGTTTAATCGTGGCTC
GTACCGTCTCAACGTGGAGTGCTGTTGATGGTTCCGTAGTGGTCTAAATT
GCGAATCCATCATCTGAGTATCTCGCTGTGCATGTTGGATTGGAGATTGG
AACTTTATCGCCGGTTACTATAGCATCGCAGGAACAGCTTCGCGTCCATG
CTGTTGCTTCGTCTCCAAAAACCGCGAGTGAAATTGCTGCTGCTAAAGCA
GAGCTGGTAGAACCGCTGTCGAAAGCGTTCACAAATTCCACGTTCTCTAA
AGAACAGCAAACTCGTGTTTTGGACCTGTGTGCCAAATATCGTCCCGTTT
TTTCGCTGAATCGTAAAGAGCTTGGTAAATGCAAGACTGCTCAAGCCACG
TTTCCCATGCCGCCTAACACGAAGCCGGTTAACCGTCGTCCCTACCGCGC
TAACCCTCGCACTGAAGCCGTTATCCAAACGTGCGTCAAGGACATGCTTG
ACGATGATATCATCGAAGAGCTGCCTAGTCAGTGGGGTTCCCCCGTTACT
CTCGTCGCGCGTAAAGATGGTAAACCGCGTTTTTGCGTCGATTTCCGAAG
CACCGTCAACAAGCACATCATTCGCAAGACCTGGCCTCTAGCGAACATGG
AGTCCAACCTTGACTCCGTCGGCAGCGCCAAGTTCATCAGCGTTGCAGAC
GTCCAGTCAGCGTACTGGCAGATTCCTGTTCACCCTGACCACGTCGAAAG
GACAGCCTTTGTCACCAACTCTGGCAAGTACTGTTACAAGCGGATGCCGT
TTGGTGTTTGTAATGCCCCGTGGATTTTTACTGAGATGGCCCATAAAACG
TTAGGCCATATTCCCGAATTGTTGATTTACATGGATGATTTCTGTGTGCT
TTCAGCAACCTTCGAGAATCATATGAAGTCTTTAGAGAGCATGTTCGTAG
CTCTCCAAGCAGCAGGTCTGACATTGAAACCTTCGAAGATTTCGTTTGGC
CCCAAATCCATCGAGTATTTGGGACACATTATTTCGGCTGAAGGTATTTC
TGTCGGGAAGGATCGTATTAAAGCCGTCCAAAACCTTCCTACACCTCGTT
GCCTTAAGGATCTTCGCTCAGTCCTCGGGGTGGTTAATTTTGTGCGCCGG
TTTATCCCGGATTATGCAGAAATAACCAATCCGTTGGTGGAGTTAACTCG
CAAAGAGTACGCCACCAAATCGCGTTTCGTAAAAGCTTGGAAAAAATCGC
ACGACGCATCGTTCGCTCATCTCAAGCGGTTATTAACTTCAGCGCCCGTT
TTACATTTTCCGGATTTCGATCGGGAATTCGTAGTTCATGTGGATGCATC
CGAACATGGGTGTGGCGCGTTTCTTGCCCAGCCGTCCAAGGCTGATCCGG
AGTCTCTTGACATAATTGCGTATTATAGTCATAGATTCAAACATGGACAG
CGTCACTACTCTGCGTCTATGAAAGAGTGTTGCGGTGTGGTTCTTGCAAT
TTCGCATGGGCGACCGTATTTATTTGGGAAACACTTTACGGTGATTACTG
ATCATCAAGCGTTGACTCATCTTTTTTATATGCAAGACACCAGCAACATG
CTCACTCGTTGGGCTATCGCTCTTCAAAATTATGATTTTACCGTCAAACA
CGTAGCGGGAAAATTGAACGTCGTCCCCGATGCGTTATCTCGTTTATTTG
GCGAAATTGAGTCCGAGTCCGTATCGCACAAACCGGCCCTGGCGTCGATT
TGTAGGAATGTGCCGAGTGATCGTCCGTACCATCCACCTGGCCCTCGTGA
CTACGAAATTTCTGCCGATTCGTTGAACGATGTTGATATTGTCCAGAATG
ACAATGAACTGTTCGCTAGTGCTGTATCGTTATTTCCTGTGCTGGATCCC
GCTAAATTGCGAAGAGAGCAGTACAAAGAGTTCGGTCCGTATATCGACTA
CGTCAAGAAACCCAAAACAGCACCGTTGCCGTCTAGCGAAAATAAAGGCA
CCATGAGTAATTACTTCTTGAATGAAAACGTGCTCTTCAGGTCGTACTTA
CCAGGGTATCTTCGTAAACGCAGTTCGTTCCGTGATCAACTTGTCGTTCC
CACCGTTTTGCGTGCGTTAGTTTTGGATTCTTGTCATGATGCTCCTGCGT
CAGGGGTCATCTAGCGTTCAAAGCCACGTACGATCGACTCAGAGATCGTT
TTGGTGGCCGACCATGTCTCGCGATGCGTCCAAACACATCCAGCATTGTT
CGTCGTGCCAACACCGAAAAACGTCCCACAGACGACCGTTATTACCTGTG
GGTCATCGTCCCGTTACCCGTCCGTTTCAGTGTGTCGCGATCGACCTCGT
TGAGTATAATTCCGTATCACAGGGTTGCAAGTACGTCTTGTCGGTCATCG
ATCACCTGACCCGTTTTCTCGTGTTGATTGCTATTCGTGATAAAAAAGCA
ACAACAATTGCACAGGCTCTCGTAGAGCGTGTCTTTTCCGTTTTCTCTCC
CCCTGAAACGTTACACAGTGATCAGGGCACTGAGTTCGAGAATGAGTTGG
TTAAAGAGTTGCAGGCCGTGTTTGGTTTCAAAAAAACTCGGACGTCCGCG
TATCGGCCGCAAGGCAACTCTGTATTAGAGCGCGTGCACAGCACAATGCA
TGGCATGCTCGCAATGTATGCAAACGTTCGGTTTGATAATTGGGCTGAGC
TTTTACCGTTTGTGCAACTCGCCCATAACACCGCGTACAACCAAACTCTT
GAGGAAACTCCTCATTATCTGATGTTCGGTCGCCAGGCTTTGCTTCCCGT
AGATGTCATTCTTGGTGTACCGTCTCATGATAGCTCTGCTTCGCGGATGG
AATATTCACGTCGTACCGTGGATAACTTGCAACTCGCGTATGAGATCGCT
CGTCGTAATTTGAAAGAGCGAACTGACAAGCAAGCAGACTCGAACGAAAA
ATTATCCGTACCGCAGTTCACTCCTGGGGAACAAGTTCTTGTACATCGTC
CCCATACCGTTATCGATGGCCCTAATCCCAAGCTGATCAGCCCTTGGCAT
GGCCCATTCACCGTTCGTTCAAAAGTGTCACCCGTCATATATCGTGTTTG
CAAAGACGGAGAACTCGCGGAAACGTCAGTACACTTGGGTCGTATGAAAA
AGTACTACGCTTTTCAACGTGATTCTGTCCCCGATTTTTCTGAATTGGAT
GAGATGTTTTTGGGACAAACACTTCCAATTCCCGATTTGGATGGTACCGT
GTTTACCGTAAAAATTGGATCGTACGTCGTCGAGGGGATACAAATTTAAA
CGTGGAGCAGGAAAACCGTCTCTCCACAACTTCCAATATTATTTCCTCCT
CAAAGACCGTCCTGCGAGTCTTGGGTGTTGGAAGCACTTCAAAGAAGTAC
CCCAGTGTCATGAGATGATCCGTTCATATCGAGCGTGCGTTCTTCGTGAT
AATCCGCACGCCTTTGATCATTCTCCCAGGAAGTAGCGTCCTGGCTGCTT
CGTATCGTGTTTCGTGCTGTGTTTTGCCTTATTCGTTTCGTATTTCGTTT
ATTTTCCAAGGGCTACGTTTTTCGTTTATTTTATTTTATTTTTTTATGTA
CATATCCGTTATTGTTCGTCGTCCAGCACGATCGTTTCGTAGTGCTCACC
GTCCCCAACGTTCCTTCGCAGTCCGGCCGGACATTGTCGTTGTTGGTGGA
TCCGCCCACGTTAGATGCAACACCTCGTGGAAGTCGGCAGGTGGAGCCTA
GTTCGCGTCGAGATTCGCCCTCCGCGAACCAAGCATGGTTGCGTGTCTTC
GTTTCGTTGGACATGCATGCTAGCGCACGTCATTTTTAAGGCATGGCGTT
GCCCGTCCGTTAGGTGATTTATTTATTTTTATATATTTCTCTGTTTGAAT
GCCGTCCGACATAGTACCTCGGACGAGCTCCGTCAGCGTTTGCACTTCCT
TATGAGTGGAACGTGTGTCCGTTTTTAAGACAATCGTGCGTGGTGTGAAG
CGTCCATTGCCGTTGTGTCGCTGTCCTTGAGATACGAGTGCGTCGTATGG
GGTCAGTTGATACTTCATGTGAAGTGAATATGCGGGATCGGAAGTTCGTC
GTTTTTCTCGTCCACTCCGTCCTTAATTTGGGGGGTGATATCGTCTCACT
TGCAGTTTGGGGGAATTGCAATTGATAATCGACTTCTGGATCCATGCACT
TTTGCATTGTTCACACGGTTTTGTTCATGCCCGATTTGTCTAGTCGTTTC
GTGCGGTGGATTTTTATTCCGTGCTGTTCGTCCGTGCGGGAATTCACATG
TTACCTACAGCGCCGCAGCTGACTGCGTGACATGTTCCGTACACCTTTCG
TTATCCGCACATCGTTTCTCGCGTGTCGTACACTGCGAAAGAGTAGATGG
GTGTCTTGGTCGTGCAAGAGGAAGCACAAGAGGACCAGACCTTCGTCCCA
CTACTGCGTCAAATCCATGCTACAGCATATCGTTTGCTGTACTCGTAATC
ACCATTCGTCGTTCGTCTATGCAGCGCCTCTCATTTGCGTAATCGCATGA
GAAGGTCGTATCGTTAGCTCTACGTGAGCTGTGCACATATGTTCGTTCGT
TGTTGCAGCTGCATATCGTTTGAGCAACGTTTTCCCAGCGGGTCGACCCA
CCACGTCATTTGCCATTCGACACTTGTGAACTTTAAGCCTTGCAAGCAAT
CGTTTTTCACAGGTGCAATGCCAAATTATTTTTCGTTGCTGGATGTTCGT
TACGTGCAACTACAAAATAGTTCACGGCGTTGTCTCAAGGTACTACTCGT
CGTACAGTTTTTTTTACACTATCGGGGCAAGACGCGCACCGAAGTGATGT
TTTTTTCTGTACACCCGTCGTTCGTTAGTACGGTAGATCACATGTTACCC
ACAGCGCCGAGGCGGACTGGAGTGGCATGTTCCGTACACCTTTCGTCATC
TGTGTAGTTATTCGTTCGTCGTACGGGAATAGTTGCCAAAATTCCTGAAT
TGCTCTCGTGCAAACTGTGGTTGTGACTGCATTATGTACGATCGATGCTC
GGATGAGATATTTTGGTGACACGTTCCAATTTTATGACTACAAAACACAG
AGCATTCGTTGAATGATGGCAGTCGCCGTACGTTACGGCCCAAGTCATTT
AACTCGTGTTTTTCATCAGTACTTCACCATTTCATACACTCTGGGTTATT
TATGTCATTCTTGTATCTTTCAATCCGGATTCAGGCCCCGTGATTGAAGA
TAGGGGGGTGCTGTGAATGCCACCTCAGACTGTAGTAGATGGTGACGTCA
GATGACCTGTCGGAGATCTACCTTCGGGGTGTTGCCACAGATAGAGTCAG
TTCGGGTGGATGCTGAACCTTGCTTCAACACAAGGTCGCTCCCCCCCCTG
ACTCACAACACAACTATCCGTACTCTTCAGCCTCTCCACCAGAGGCTGAA
CCGGTGTGTATCCACACCACACATCCCAAGGGGAACTTGCTCACACGCGA
ACCTGGACAACAGTCTCATAGATTGCCGAAAGTTATTTGTCGGGAGATGT
TTCACCCGCTGCCCGTTCAACCCTCCGATGGATTGTGAAGAATTGATTGT
CCGGGAGTTGAACGGACGAACTGACGTTTTGCAGCAGCAATTGTGACAAT
TGTGAGACCGCTCTATCATGACGTCTTTCCGCTCGCTCTGTGTTGCTGCT
TTGCTATGCTACTTGTTACTGCTACTTGACGAACGGGCAGAACAAAGAAC
AAGACGAATCAGAGATCCTGCGGGCGGTCACGGCCCAACAGACCGCCCTC
CTTCAGGCCGCGAAGCCTGCCACGCCGAAGACGTTCTACCAGCACGTCGT
GGGCCAGCAGCGGGCGTACGGAAAGGCGAGTAAAATGTAA

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:608980..619169+

>mRNA_Ecto-sp6_S_contig88.17898.1 ID=mRNA_Ecto-sp6_S_contig88.17898.1|Name=mRNA_Ecto-sp6_S_contig88.17898.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:608980..619169+ (Ectocarpus species6 EcLAC_371)
ATGAGGGCTTGGATGCTGCTGGTGGTGCTGTCAATGCTCCTCGCGTTCGG
AGCACACGGCAAGGGCATCAACGCGCCCGCCAACGCCACGCCAGACAACC
AATGCTGCTCTGCTCTGCTGGTGGAGGACGAGGCCGGCTCTCTCGACGCC
TTTGGGCAATACCGCCTGCCGCCTTCTTGCGGTGGAGAACTTGCCGTGGC
CTGCCCCAGGCTCGGGTTCAACTCGGCGGCAATGAACGACGGGTCAATGA
CCCCTAGCTGGAACGCGTTCCGGCAACAGGCCGACCTCCGCCTGGCCCCT
TCCTGCCCGCGGGTGGAATGGGAGAAGAGGTGCCCGCCCGGGGCCACCAT
GCTCCTGGCGGAGAAGAGGAGGGGCGGGTGCCGCGCGGCCGGCTGCGTTG
CGGTGGGCGGCGAGCTGAACGACAACAAAGAACAAGACGAATCAGAGATC
CTGCGGGCGGTCACGGCCCAACAGACCGCCCTCCTTCAGGCCGCGAAGCC
TGCCACGCCGAAGACGTTCTACCAGCACGTCGTGGGCCAGCAGCGGGCGT
ACGGAAAGGCGAGTAAAATGTAA