mRNA_Ecto-sp6_S_contig88.17893.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 777 bits (2007), Expect = 2.380e-282 Identity = 373/378 (98.68%), Postives = 374/378 (98.94%), Query Frame = 1
Query: 145 PFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMANPTPAPTEPLADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDWDQCGGTTEVGYWEXXXXXXXXXXXXXXXXXXXXXLPDDNVPDAE 1278
PFERMEYCPSCYNARGPTY+KERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLE DEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDP CREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADF ITPDGMANPTPAPTEPLADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDWDQCGGTTEVGYWEXXXXXXXXXXXXXXXXXXXXXLPDDNVPD E
Sbjct: 10 PFERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANPTPAPTEPLADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDWDQCGGTTEVGYWEXXXXXXXXXXXXXXXXXXXXXLPDDNVPDEE 387
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 388 bits (996), Expect = 2.720e-127 Identity = 187/343 (54.52%), Postives = 231/343 (67.35%), Query Frame = 1
Query: 82 HLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMANPTPAPTEPLADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYS 1107
H+ Q P +RQ+ ++ W +E+CP CYNARGP Y+K+R N D A L YG GE +PL + GE A+NGNYLE +EIAKRHG+CGDPEQN +EG N YST N +W L+++ GQVLE+ + M AYHWGH EFF+CN D+M+DPDG+ QECFN +PLTRA+ D + SPIDPNYPGRYYVDP CRE ET+Q+ + +GY I Y LP+ + C+ CILQM YYTGN+CKH+GYEEF P SWPS+CAP K DWIELDRY+CG G YPEEFWAC+DF +T DG TPA P+ D +D D G G E E CY+
Sbjct: 21 HIMQKYPMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSS--NSIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGS---TPADA-PMPDPVDEEDDEDSTDG-----------GMEMYEYVGCYT 341
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 6.370e-127 Identity = 196/335 (58.51%), Postives = 235/335 (70.15%), Query Frame = 1
Query: 1 MVSRHRCTEAAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDG-EWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMANP-TP--APTEPL 993
M+ R AAV A +A GH+ Q P +RQ PV++EW F ++YCP CYNARGP Y+KER TDPAVL EYG G E+PL + G+ A+NGNYLE DEIAKRHGICGDPEQN +EG+N YST N W +L +++ G+VLE+ + M AYHWGH EFF+CNADEM+DPDG+ QECFN YPLTRA D + SPIDPNYPGRYYVDP CR GET+Q PEGA GY I Y LP+ + CDRC+LQM H+GY+EF+P SWPS CAP K DWIEL+RY+CGE G+YPEEFWAC+D +T DG A P TP PT P+
Sbjct: 1 MIQRSSAFAAAVAAATLLANH---AHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYF----GDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETEQGSPEGAPKGYNIKMRYVLPD-IECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGEEGAYPEEFWACSDISLTSDGSAPPPTPYTTPTTPV 318
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 382 bits (981), Expect = 1.430e-124 Identity = 200/492 (40.65%), Postives = 254/492 (51.63%), Query Frame = 1
Query: 70 QVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHW-----------------------------------------------------------------------GHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPD----GMANPTPAPTE-----------------------------------------------PLA-DCLDPVGPYDQCGGED-YEGSDCCREGYECTEMASCYSQCRPIP----GGCSEDWDQCGG 1161
QV GH+Y P +R + + +QE + + +CP C+ +RGP+ ++ERG NT+ AVLA YG GEWP ++YE+ E+ NGNY E +EI+ RHGICGDPEQ + EG N Y N +P+ Y EG ++EIK+ ++ YHW GH+EFFICNA++M DPDG+ Q CFN +PL RA+ D + SPIDP++ GRYY+DP CR GETDQ GA G V A Y+LP GLTC RCILQM YYTGN+CKH GY+EF+P S P CAP K DW++ +CGE+G YPEEFW CAD IT D G A TP+PT+ P A C DP Y+QCGG+D Y+G CC E EC E+A CYS+CRP CS +W QCGG
Sbjct: 3 QVEGHVYLMVPVSRNFWATDAFQESSYSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGGGPAPTTPSPTDEEELSPTPEPSVPTVELPRTPXXXXXXXXXXXSGMESTPVPSVAPASPTATSCDDPAEVYEQCGGDDSYDGRTCCVENSECVELADCYSECRPAETTPEDNCSGEWGQCGG 494
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.090e-123 Identity = 198/408 (48.53%), Postives = 244/408 (59.80%), Query Frame = 1
Query: 19 CTEAAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDG-EWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCR--EGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMA-NPTPA-----PTEPLADCLDPVGPYDQCGGED-------YEGSDCCREGYECTEMASCYSQCRPI-----------PGGCSEDWDQCGG 1161
CT LAL + +GH+Y+ P +R S + + + CP CYNA G K RG+ DP VL +G G E+PL + +A NGNYLE +E+A RHG+CGDPEQ + G+N YST + +W L TY+ GQVLE + M A+HWGH+EFFICNAD DPDGI QECFN YPLTRAEGDD+NSPIDPN+PGRYY DPTCR GE DQTKP A G + Y LP+ + C CILQM Y+TGN+C H+GYEEF P SWPSACAP K DW++ R CG+ G YPEEFWAC+DF IT D +PTP+ P +C + G QCGG + G CC G C+ +S+CRP P C+E+W QCGG
Sbjct: 5 CTVVLALALR-------KAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGYYPEEFWACSDFSITRDATPPSPTPSVETIPPVNEPTECAEEWG---QCGGAGGGAVDGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGG 395
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 380 bits (975), Expect = 2.050e-123 Identity = 180/324 (55.56%), Postives = 217/324 (66.98%), Query Frame = 1
Query: 22 TEAAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICN-ADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMANPTPAPTEP 990
T AAV L A + Y P +R V S V+Q E+ E CP C N+ GP Y+KE+G+ T+ +LAEYGDGEWPL AY KGEM +NGN+ E DEI+ RHGICGDP+Q E N YS+ DW L T +EG VL+IK+ + Y GH+EFFICN AD P NQECFN PLTRAEGDD NSPIDP YPGRYYV+P C E + P+GAQDGYVI+ YQLPEGLTCD C+LQM +YTGN+CKHVGY++FEP SWPS CAP K +WI D ++CG G+YPEE W+C+D IT DG + +P EP
Sbjct: 2 TGAAVTVFLAAATVITRAEAGTYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGAYPEEHWSCSDISITTDGPTEKSSSPVEP 325
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 362 bits (928), Expect = 8.600e-117 Identity = 195/487 (40.04%), Postives = 245/487 (50.31%), Query Frame = 1
Query: 28 AAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDG----------------------MANPTPAPT-------------------EPLA------------------------------------------------------------------------DCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDW 1146
AA+LA Q GH+Y P +RQ++ + +QE + YCP C+ +RGP I+ RG GD WP + GE A+NGNY+E+DE+A+RHG+CGDPEQ EG+N Y N ++P+L TY EG +LE+K+ ++ YHWGHVE F+C+AD++ D PD + Q CFN YPL RAE D+ N PIDP GR+ +DP CR ETDQ GA G V A +QLP+G+TC+RC++QM YYTGNSCKH GY EF P SWPS+CAP K DWI CG+ +YPEEFW CAD IT DG P+PAPT EP+ DC DPVG + QCGG Y+GS CCR GYEC +MA CYS+CRP CSE W
Sbjct: 8 AALLAASGFFAQLPVSDGHVYMMNPVSRQLWGTEAFQEPGSPDINYCPHCFQSRGPAAIRARG------------GDQPWP----HFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXPETPQKPEAPVDEATEPSPAPTAVVEEYXXXXXXXXXXXHEEPMTPSPTTAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTDPDCEDPVGAFAQCGGAGYDGSTCCRAGYECEKMADCYSECRPRGDRCSEGW 478
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.340e-113 Identity = 185/375 (49.33%), Postives = 227/375 (60.53%), Query Frame = 1
Query: 43 LLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDG-EWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCR--EGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDGMANPT------PAPTEPLADCLDPVGPYDQCGGED-------YEGSDCCREGYECTEMASCYSQCRP 1119
LL A ++ Q GH+YQ P +R S + + + CP CYNA G K RG DP VLA++G G ++PL + A NGNYLE +E+A RHG+CGDPEQN+ G+N YST + +W L T+Q GQ LE + M AYHWGH+EFFICNAD DP+GI QECFN YPLTRAEGDD NSPIDP++PGRYY DPTCR EGE DQTKP A G + Y LP+ + C CILQM Y+TGN+C H+GY++F+P SWP CA K W+ CG+ G YPEEFWAC+DF IT DG + T PA TEP C + + QCGG + G CC G C +S CRP
Sbjct: 9 LLAAALRKAQ--GHIYQLYPMSRSFANSESFLDMDDPNFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTG-CAEE---WQQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 370
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 351 bits (900), Expect = 3.370e-112 Identity = 200/512 (39.06%), Postives = 243/512 (47.46%), Query Frame = 1
Query: 7 SRHRCTEAAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICN-ADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFVITPDG--------------------------------------------------------------------------------------------------------------------MANPTPAPTEPL---------------ADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDW 1146
SR AA+L++ Q GH+Y P +RQ+ + + + +CP CY +RGP I+ER GD WP + +G A NGNYLE+DE+A+RHGICGDPEQ EG N Y N ++P+L TY EG VLE+K+ ++ YHWGHVE F+C+ AD E D I Q CFN+YPL RA D+ N PIDP Y GR+ +DP CR ETDQ EGA G V A YQLPEG+ CDRC++QM YYTGNSCKH GY EF P SWPS+CAP K DWI CG+ +YPEEFW CAD IT DG A P +PTEP+ +DC DPVG ++QCGGE Y+GS CCR GYEC EMA CYS+CRP CSE W
Sbjct: 8 SRXXXVAAALLSVGGFLAQLPVSDGHVYMMTPISRQLGGTTPFNPEGEVPVNFCPHCYQSRGPAAIRERS------------GDKPWP----HYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPGTAPXXXXXXXXXXXXXXXEEEGTEAPMXXXXXXXXXXXXXXXXEFDDESTPXXXXXXXXXXXXXXXXXXXXXXEPTTPAPVEGDXXXXXXXXXXSMDGEDYXXXXXXXTAELEPATPMDSPTEPIVATFAPSVPPPISDHSDCEDPVGAFNQCGGEGYDGSTCCRAGYECEEMAECYSECRPKDDRCSEGW 503
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 353 bits (905), Expect = 2.880e-110 Identity = 161/280 (57.50%), Postives = 199/280 (71.07%), Query Frame = 1
Query: 121 LSPVYQEWPFERMEYCPSCYNARGPTYIKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLENDEIAKRHGICGDP---EQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPTCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENG-SYPEEFWACADFVIT 948
+S VYQE F +E YNA G +++R TDPA+LAEYGDG +PLRW Y+KGEMA NGNY+E I+ RHG+CGDP +Q ++G N YSTPN DWP+L +++GQ +EIK M A+H+GH+EFFIC+ +++DPD +A QECFN YPLTR+EGD NSPIDPNYPGRYY DP CRE ET+Q A GYV+ +Y LPE L C+ C+LQM YYTG+ C H GYEEF PASW S CAP K DWI+L CG+N + EEFWAC+D IT
Sbjct: 1 MSAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAIT 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig88.17893.1 >prot_Ecto-sp6_S_contig88.17893.1 ID=prot_Ecto-sp6_S_contig88.17893.1|Name=mRNA_Ecto-sp6_S_contig88.17893.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=427bp MVSRHRCTEAAVLALLTVARQQGQVRGHLYQFEPATRQVYLSPVYQEWPFback to top mRNA from alignment at Ecto-sp6_S_contig88:568581..573541- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig88.17893.1 ID=mRNA_Ecto-sp6_S_contig88.17893.1|Name=mRNA_Ecto-sp6_S_contig88.17893.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4961bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:568581..573541- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:568581..573541- >mRNA_Ecto-sp6_S_contig88.17893.1 ID=mRNA_Ecto-sp6_S_contig88.17893.1|Name=mRNA_Ecto-sp6_S_contig88.17893.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1281bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:568581..573541- (Ectocarpus species6 EcLAC_371)back to top |