mRNA_Ecto-sp6_S_contig88.17892.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 754 bits (1946), Expect = 5.200e-272 Identity = 349/370 (94.32%), Postives = 356/370 (96.22%), Query Frame = 1
Query: 1 MMTRFCTVLLAVALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTGCAEEWEQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 1110
MMTRFCTVLLA ALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCP CYNAHGS GTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNK GSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDP+GIPTQECFNEYPLTRAEGDD NSPIDPDFPGRYYCDPTCRGEE EVDQTKP+HAISGENMKMRYVLPDIECSHCILQMVYHTGNTC+HIGY+ F+PPSWP CA KE WV+TT EACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTGCAEEW+QCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP
Sbjct: 1 MMTRFCTVLLAAALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTGCAEEWQQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 370
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 696 bits (1795), Expect = 1.480e-249 Identity = 318/370 (85.95%), Postives = 331/370 (89.46%), Query Frame = 1
Query: 4 MTRFCTVLLAVALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDG-PPSSTXXXXXXPAVTEPTGCAEEWEQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 1110
M R CTV+LA+ALRKAQGHIY+LYPMSRSFANSESFLD DDPNFDGCPHCYNAHGSAGTKARG ELMDPDVL HGGG +FPL+FVP APNGNYLEPNEVAVRHGVCGDPEQ K GSNTYSTASSNWEPL T++SGQ LEF +VMNA+HWGHLEFFICNADNDP GIPTQECFNEYPLTRAEGDDDNSPIDP+FPGRYYCDPTCRG+ EVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYE FNPPSWPSACAPNKEDWVDTT EACGQ GYYPEEFWACSDFSIT D PPS T P V EPT CAEEW QCGGAGG AV GVWTGPTCCV GTTC YKD +WS+CRP
Sbjct: 1 MVRVCTVVLALALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGYYPEEFWACSDFSITRDATPPSPTPSVETIPPVNEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGTTCSYKDEWWSECRP 370
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: A0A6H5L279_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L279_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 3.250e-136 Identity = 196/303 (64.69%), Postives = 205/303 (67.66%), Query Frame = 1
Query: 202 MDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTGCAEEWEQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 1110
MDPDVL HGGG +FPL+FVP APNGNYLEPNEVAVRHGVCGDPEQ K GSNTYSTASSNWEPL TFQSGQ LEF+VVMNAYHWGHLEFFICNAD+DP GIPTQECFN+ P AISG NMKMRYVLPDIECSHCILQMVYHTGNTC+H+GYE FNPPSWPSACAP+KEDWVDTTG+ACGQ GYYPEEFWACSDFSI S GPTCCVPGTTCYYKDVYWSDCRP
Sbjct: 1 MDPDVLESHGGGNEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQFKPSGSNTYSTASSNWEPLATFQSGQVLEFDVVMNAYHWGHLEFFICNADSDPDGIPTQECFNQ----------------------------------------PSPAISGNNMKMRYVLPDIECSHCILQMVYHTGNTCYHMGYEEFNPPSWPSACAPDKEDWVDTTGQACGQGGYYPEEFWACSDFSIAS------------------------------------------GPTCCVPGTTCYYKDVYWSDCRP 221
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 397 bits (1021), Expect = 2.680e-131 Identity = 182/291 (62.54%), Postives = 210/291 (72.16%), Query Frame = 1
Query: 55 GHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDG 921
HI Q YPMSR + F DDP + CPHCYNA G K R + +D L +GGG +FPL F A NGNYLE NE+A RHGVCGDPEQN G+N YSTA+ NW+PL +F SGQ LE ++VMNAYHWGH EFF+CN D+ DP G+PTQECFN +PLTRA+ D D SPIDP++PGRYY DP CR EE E ++I G N+KMRYVLPDIEC HCILQMVY+TGNTC HIGYE FNP SWPS+CAPNK DW++ CG G YPEEFWACSDFS+TSDG
Sbjct: 20 AHIMQKYPMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSS----NSIEGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDG 306
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 347 bits (889), Expect = 7.630e-113 Identity = 177/334 (52.99%), Postives = 212/334 (63.47%), Query Frame = 1
Query: 142 CPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTG-CAEE---WEQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 1110
CP CYNA G K RG DP VLA++G G ++PL + A NGNYLE +E+A RHG+CGDPEQN+ G+N YST + +W L T+Q GQ LE + M AYHWGH+EFFICNAD DP GI QECFN YPLTRAEGDD+NSPIDP++PGRYY DP CR E E DQTKP A G + Y LP+ + C CILQM Y+TGN+C H+GYE F P SWPSACAP K DW++ CG+ G YPEEFWAC+DF+IT DG + T PA TEP C + ++QCGG + G CC G C +S CRP
Sbjct: 17 CPSCYNARGPTYVKERGMVNTDPAVLAEYGDG-EWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANPT------PAPTEPLADCLDPVGPYDQCGGED-------YEGSDCCREGYECTEMASCYSQCRP 334
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 373 bits (958), Expect = 8.620e-113 Identity = 172/293 (58.70%), Postives = 205/293 (69.97%), Query Frame = 1
Query: 49 AQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNAD--NDPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDG 921
A GHI Q+YP+SR ++ F + D P D CPHCYNA G K R DP VL ++GGG ++PL F A NGNYLE +E+A RHG+CGDPEQN GSN YSTA+ W+ L +F+SG+ LE +++MNAYHWGH EFF+CNAD +DP G+PTQECFN YPLTRA D D SPIDP++PGRYY DP CR E E Q P A G N+KMRYVLPDIEC C+LQM HIGY+ F+PPSWPS CAPNK DW++ CG+EG YPEEFWACSD S+TSDG
Sbjct: 22 AHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETE--QGSPEGAPKGYNIKMRYVLPDIECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGEEGAYPEEFWACSDISLTSDG 303
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 290 bits (741), Expect = 4.910e-89 Identity = 138/297 (46.46%), Postives = 180/297 (60.61%), Query Frame = 1
Query: 49 AQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPSG---IPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGPP 927
+ GH+Y + P+SR +E+F + P+ + CPHC+ + G A +ARG + P + RA NGNY+E +EVA RHGVCGDPEQ GSN Y +SN+ L T+ G LE +V++ YHWGH+E F+C+AD+ P G + TQ CFNEYPL RAE D+ N PIDP GR+ DP CR E DQ A +G+ R+ LP + C C++QM Y+TGN+C H GY FNPPSWPS+CAP+K DW++ CG YPEEFW C+D SITSDG P
Sbjct: 23 SDGHVYMMNPVSRQLWGTEAFQEPGSPDINYCPHCFQSRGPAAIRARGGDQPWPHFNGE-------------RAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASE--TDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 279 bits (714), Expect = 4.750e-87 Identity = 134/301 (44.52%), Postives = 173/301 (57.48%), Query Frame = 1
Query: 40 LRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPSG---IPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGPPS 930
L H+Y + P+SR + +F D P+ + CPHC+ + G A +ARG + P + RA NGNY+E EVA RHG+CGDPEQ SN Y +SN+ T+ G LE +V++ YHWGH+E F+CNA N P G TQ CFNE+PL RA+ D+ N P DPD GR+ DP CR E DQ A + R+ LP + C C++QMVY+TGN+C H GY FNPPSWPS+CAP+K DW++ CG YPEEFW C+D SITSDG P+
Sbjct: 23 LPTGDSHVYMMTPVSRQLWGTSAFQDAGSPDINYCPHCFQSRGPAAVRARGGDKPWPHFNGE-------------RAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASE--TDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPA 308
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 282 bits (722), Expect = 7.950e-86 Identity = 151/347 (43.52%), Postives = 198/347 (57.06%), Query Frame = 1
Query: 19 TVLLAVA--LRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN---DPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEGFNPPSWPSACAPNKEDWVDTTGEACGQEGYYPEEFWACSDFSITSDGP--------------PSSTXXXXXXPAVTEPTGCAE 987
TV LA A + +A+ Y L P SR +S F F+ CP C N+ G K +G + +LA++G G ++PL NGN+ E +E++ RHG+CGDP+Q L +N YS++ S+W L T + G L+ VV+ Y GHLEFFICN+ + P+ P QECFN PLTRAEGDD NSPIDP +PGRYY +P C E + P A G + M+Y LP+ + C HC+LQMV++TGNTC H+GY+ F P SWPS CAP K +W++T CG G YPEE W+CSD SIT+DGP P ST P+ TE G E
Sbjct: 7 TVFLAAATVITRAEAGTYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDG-EWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHP--EALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGAYPEEHWSCSDISITTDGPTEKSSSPVEPDTPPPLSTATPVATPSPTEALGANE 350
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 293 bits (751), Expect = 4.070e-85 Identity = 140/247 (56.68%), Postives = 168/247 (68.02%), Query Frame = 1
Query: 13 FCTVLLAVAL--RKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHCYNAHGSAGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKLPGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNAD--NDPSGIPTQECFNEYPLTRAEGDDDNSPIDPDFPGRYYCDPTCRGEEDEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVY 741
F L A L A GHI Q+YP+SR ++ F + D P D CPHCYNA G K R DP VL ++GGG ++PL F A NGNYLE +E+A RHG+CGDPEQN GSN YSTA+ W+ L +F+SG+ LE +++MNAYHWGH EFF+CNAD +DP G+PTQECFN YPLTRA D + SPIDP++PGRYY DP CR E E Q P A G N+KMRYVLPDIEC C+LQMVY
Sbjct: 8 FAATLAAATLLANHAHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLDSFKSGEVLEIDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGNASPIDPNYPGRYYVDPECRAGETE--QGSPEGAPKGYNIKMRYVLPDIECDRCVLQMVY 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig88.17892.1 >prot_Ecto-sp6_S_contig88.17892.1 ID=prot_Ecto-sp6_S_contig88.17892.1|Name=mRNA_Ecto-sp6_S_contig88.17892.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=469bp MMTRFCTVLLAVALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPHback to top mRNA from alignment at Ecto-sp6_S_contig88:551763..560329+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig88.17892.1 ID=mRNA_Ecto-sp6_S_contig88.17892.1|Name=mRNA_Ecto-sp6_S_contig88.17892.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8567bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:551763..560329+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:551763..560329+ >mRNA_Ecto-sp6_S_contig88.17892.1 ID=mRNA_Ecto-sp6_S_contig88.17892.1|Name=mRNA_Ecto-sp6_S_contig88.17892.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:551763..560329+ (Ectocarpus species6 EcLAC_371)back to top |