mRNA_Ecto-sp6_S_contig88.17891.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 924 bits (2387), Expect = 0.000e+0 Identity = 421/435 (96.78%), Postives = 427/435 (98.16%), Query Frame = 1
Query: 1 MVRFCTVVLSLALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSPTPSVETIPPVNEPTGCAEEWGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGSTCTNKDVWWSECRPDDYDGR 1305
MVR CTVVL+LALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMD DVL+SHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTK +GSNTYSTASSNWEPLATYRSGQ LEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFN+YPLTRAEGDDDNSPIDPNFPGRYYCDPTCRG+TGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTT EACGQGGYYPEEFWACSDF ITRDATPPSPTPSVETIPPVNEPT CAEEWGQCGGAGGGAV+GVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGSTCT KDVWWSECRPDDYDGR
Sbjct: 1 MVRVCTVVLALALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGYYPEEFWACSDFSITRDATPPSPTPSVETIPPVNEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGSTCTKKDVWWSECRPDDYDGR 435
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 670 bits (1728), Expect = 2.160e-239 Identity = 306/370 (82.70%), Postives = 327/370 (88.38%), Query Frame = 1
Query: 1 MVRFCTVVLSLALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSPTPSVETIPPVNEPTGCAEEWGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSECRP 1110
M RFCTV+L+ ALRKAQGHIY+LYPMSRSFANSESFLD DDPNFDGCP CYNAHGS GTKARG ELMD DVL HGGG +FPL+FVP APNGNYLEPNEVAVRHGVCGDPEQ K SGSNTYSTASSNWEPL T++SGQDLEF +VMNA+HWGHLEFFICNADNDP+GIPTQECFN+YPLTRAEGDD NSPIDP+FPGRYYCDPTCRG+ GEVDQTKP+HAISGENMKMRYVLPDIECSHCILQMVYHTGNTC+HIGY++F+PPSWP CA KE WV+TT EACGQ GYYPEEFWACSDF IT D PPS T P V EPTGCAEEW QCGGAGG AV GVWTGPTCCV GTTC YKD +WS+CRP
Sbjct: 2 MTRFCTVLLAAALRKAQGHIYQLYPMSRSFANSESFLDMDDPNFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQEGYYPEEFWACSDFSITSDG-PPSSTXXXXXXPAVTEPTGCAEEWQQCGGAGGDAVGGVWTGPTCCVPGTTCYYKDVYWSDCRP 370
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: A0A6H5L279_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L279_9PHAE) HSP 1 Score: 434 bits (1116), Expect = 1.060e-148 Identity = 215/340 (63.24%), Postives = 230/340 (67.65%), Query Frame = 1
Query: 199 MDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADNDPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSPTPSVETIPPVNEPTGCAEEWGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGGAGGGAVDGVWT 1218
MD DVL+SHGGG+EFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQ K SGSNTYSTASSNWEPLAT++SGQ LEF +VMNA+HWGHLEFFICNAD+DPDGIPTQECFNQ P AISG NMKMRYVLPDIECSHCILQMVYHTGNTC+H+GYEEFNPPSWPSACAP+KEDWVDTTG+ACGQGGYYPEEFWACSDF I +GPTCCV GTTC YKD +WS+CRP ECAEEWGQCGG+GGGAVDGVWT
Sbjct: 1 MDPDVLESHGGGNEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQFKPSGSNTYSTASSNWEPLATFQSGQVLEFDVVMNAYHWGHLEFFICNADSDPDGIPTQECFNQ----------------------------------------PSPAISGNNMKMRYVLPDIECSHCILQMVYHTGNTCYHMGYEEFNPPSWPSACAPDKEDWVDTTGQACGQGGYYPEEFWACSDFSIA-------------------------------------------SGPTCCVPGTTCYYKDVYWSDCRPA-------------ECAEEWGQCGGSGGGAVDGVWT 244
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 5.430e-138 Identity = 219/480 (45.62%), Postives = 267/480 (55.62%), Query Frame = 1
Query: 52 GHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSPTPSVETIPPVN------------EPTGCAEE---------------------WGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSEC-----------------------RPTGDSSSDDTP-----EEPTE-----CAEEWGQCGGAGGGAVDGVWTGPTCCVSGSTCTNKDVWWSECRP 1287
HI + YPMSR + F DDP + CPHCYNA G K R + +DS LD++GGG EFPL F A NGNYLE NE+A RHGVCGDPEQ G+N YSTA+ NW+PL ++ SGQ LE IVMNA+HWGH EFF+CN D+ DPDG+PTQECFN +PLTRA+ D D SPIDPN+PGRYY DP CR E + + ++I G N+KMRYVLPDIEC HCILQMVY+TGNTC HIGYEEFNP SWPS+CAPNK DW++ CG G YPEEFWACSDF +T D + P+ P + + + E GC + + C G + + C + Y+ + C P+ D + TP EPT CAE WGQCGG G W G TCC+ G C + W+S+CRP
Sbjct: 20 AHIMQKYPMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECR----EEETEQSSNSIEGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGSTPADAPMPDPVDEEDDEDSTDGGMEMYEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSDGCAEAWGQCGG-------GNWEGSTCCMEGYECVANNDWYSQCRP 488
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 354 bits (908), Expect = 3.420e-116 Identity = 183/357 (51.26%), Postives = 222/357 (62.18%), Query Frame = 1
Query: 139 CPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATP-PSPTPSVETIPPVNEPTGCAEEWGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGG 1185
CP CYNA G K RG+ D VL +G G E+PL + +A NGNYLE +E+A RHG+CGDPEQ + G+N YST + +W L TY+ GQ LE + M A+HWGH+EFFICNAD DPDGI QECFN YPLTRAEGDD+NSPIDPN+PGRYY DP CR GE DQTKP A G + Y LP+ + C CILQM Y+TGN+C H+GYEEF P SWPSACAP K DW++ CG+ G YPEEFWAC+DF IT D P+P P+ E + +P G + QCGG + G CC G C+ +S+CRP P C+E+W QCGG
Sbjct: 17 CPSCYNARGPTYVKERGMVNTDPAVLAEYGDG-EWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANPTPAPT-EPLADCLDPVG---PYDQCGGED-------YEGSDCCREGYECTEMASCYSQCRPI-----------PGGCSEDWDQCGG 348
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 375 bits (962), Expect = 7.640e-114 Identity = 175/314 (55.73%), Postives = 211/314 (67.20%), Query Frame = 1
Query: 28 SLALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNAD--NDPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSPTPSVETIPPV 963
+L A GHI ++YP+SR ++ F + D P D CPHCYNA G K R D VL+ +GGG E+PL F A NGNYLE +E+A RHG+CGDPEQ GSN YSTA+ W+ L +++SG+ LE I+MNA+HWGH EFF+CNAD +DPDG+PTQECFN+YPLTRA D D SPIDPN+PGRYY DP CR GE +Q P A G N+KMRYVLPDIEC C+LQM HIGY+EF+PPSWPS CAPNK DW++ CG+ G YPEEFWACSD +T D + P PTP PV
Sbjct: 16 TLLANHAHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRA--GETEQGSPEGAPKGYNIKMRYVLPDIECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGEEGAYPEEFWACSDISLTSDGSAPPPTPYTTPTTPV 318
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 293 bits (750), Expect = 1.170e-90 Identity = 185/510 (36.27%), Postives = 239/510 (46.86%), Query Frame = 1
Query: 37 LRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHW-----------------------------------------------------------------------GHLEFFICNADN--DPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDA-------TPPSPT----------PSVETIPPVNEP-----------------------------TGC---AEEWGQCGGAGGGAVNGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPEEPTECAEEWGQCGG 1185
+ + +GH+Y + P+SR+F +++F + + + CPHC+ + G + + RG E + VL +G G E+P F + NGNY EP E++VRHG+CGDPEQTK G+N Y +S + Y G +E IV++ +HW GHLEFFICNA++ DPDG+ TQ CFN +PL RA+ D D SPIDP+ GRYY DP CR GE DQ A G+ RY LP + CS CILQMVY+TGN C H GY+EF+P S P CAP KEDWV T CG+ G YPEEFW C+D IT D T PSPT PSV T+ P T C AE + QCGG + + G TCCV + C + +SECRP + TPE+ C+ EWGQCGG
Sbjct: 1 MHQVEGHVYLMVPVSRNFWATDAFQESSYSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRG-EWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRA--GETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGGGPAPTTPSPTDEEELSPTPEPSVPTVELPRTPXXXXXXXXXXXSGMESTPVPSVAPASPTATSCDDPAEVYEQCGG------DDSYDGRTCCVENSECVELADCYSECRPA-----ETTPED--NCSGEWGQCGG 494
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 286 bits (732), Expect = 3.830e-88 Identity = 148/332 (44.58%), Postives = 190/332 (57.23%), Query Frame = 1
Query: 46 AQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADNDPDG---IPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDA-----------TPPSP-TPSVETIPPVNEPTGCAEEW 993
+ GH+Y + P+SR +E+F + P+ + CPHC+ + G A +ARG G +P A NGNY+E +EVA RHGVCGDPEQT GSN Y +SN+ L TY G LE IV++ +HWGH+E F+C+AD+ PDG + TQ CFN+YPL RAE D+ N PIDP GR+ DP CR E DQ A +G+ R+ LP + C C++QM Y+TGN+C H GY EFNPPSWPS+CAP+K DW++ CG G YPEEFW C+D IT D TP P P E P PT EE+
Sbjct: 23 SDGHVYMMNPVSRQLWGTEAFQEPGSPDINYCPHCFQSRGPAAIRARG-------------GDQPWPHFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRAS--ETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXPETPQKPEAPVDEATEPSPAPTAVVEEY 339
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 270 bits (690), Expect = 6.860e-84 Identity = 139/322 (43.17%), Postives = 177/322 (54.97%), Query Frame = 1
Query: 37 LRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNADN---DPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTGEACGQGGYYPEEFWACSDFRITRDATPPSP---------TPSVETIPPV 963
L H+Y + P+SR + +F D P+ + CPHC+ + G A +ARG G +P A NGNY+E EVA RHG+CGDPEQT SN Y +SN+ TY G LE IV++ +HWGH+E F+CNA N PD TQ CFN++PL RA+ D+ N P DP+ GR+ DP CR E DQ A + R+ LP + C C++QMVY+TGN+C H GY EFNPPSWPS+CAP+K DW++ CG G YPEEFW C+D IT D P T ET PPV
Sbjct: 23 LPTGDSHVYMMTPVSRQLWGTSAFQDAGSPDINYCPHCFQSRGPAAVRARG-------------GDKPWPHFNGERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRAS--ETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPAPXXXXXXXXXXTAPEETEPPV 329
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 288 bits (738), Expect = 9.390e-84 Identity = 136/239 (56.90%), Postives = 166/239 (69.46%), Query Frame = 1
Query: 28 SLALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDSDVLDSHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKLSGSNTYSTASSNWEPLATYRSGQDLEFVIVMNAHHWGHLEFFICNAD--NDPDGIPTQECFNQYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGKTGEVDQTKPLHAISGENMKMRYVLPDIECSHCILQMVY 738
+L A GHI ++YP+SR ++ F + D P D CPHCYNA G K R D VL+ +GGG E+PL F A NGNYLE +E+A RHG+CGDPEQ GSN YSTA+ W+ L +++SG+ LE I+MNA+HWGH EFF+CNAD +DPDG+PTQECFN+YPLTRA D + SPIDPN+PGRYY DP CR GE +Q P A G N+KMRYVLPDIEC C+LQMVY
Sbjct: 16 TLLANHAHGHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLDSFKSGEVLEIDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGNASPIDPNYPGRYYVDPECRA--GETEQGSPEGAPKGYNIKMRYVLPDIECDRCVLQMVY 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig88.17891.1 >prot_Ecto-sp6_S_contig88.17891.1 ID=prot_Ecto-sp6_S_contig88.17891.1|Name=mRNA_Ecto-sp6_S_contig88.17891.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=436bp MVRFCTVVLSLALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCback to top mRNA from alignment at Ecto-sp6_S_contig88:539891..547243+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig88.17891.1 ID=mRNA_Ecto-sp6_S_contig88.17891.1|Name=mRNA_Ecto-sp6_S_contig88.17891.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7353bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:539891..547243+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:539891..547243+ >mRNA_Ecto-sp6_S_contig88.17891.1 ID=mRNA_Ecto-sp6_S_contig88.17891.1|Name=mRNA_Ecto-sp6_S_contig88.17891.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1308bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:539891..547243+ (Ectocarpus species6 EcLAC_371)back to top |