mRNA_Ecto-sp6_S_contig88.17885.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 845 bits (2183), Expect = 8.150e-287 Identity = 433/438 (98.86%), Postives = 433/438 (98.86%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLRWG 1316
SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHG GLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGM FLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFG VMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL G
Sbjct: 568 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLG 1005
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 791 bits (2043), Expect = 2.550e-263 Identity = 408/438 (93.15%), Postives = 412/438 (94.06%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLRWG 1316
SIDE+LLEMFERLPQTVRGFEEQAG DSCTNVLEPELMRA +GSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEH LWYLEEDGLFRDEHGFG DGIPVALL ALLKGVRQGIWDNTP LTFLPG QFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVA LS FVLFHSTT SD GLDGI HR SLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALG+ FLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQF GPMVQVIFRMTATLLQFG VMLVVMIGFTMALHV FRDV DFGDTLLGLFKAMLGETG FDEFSGGRYDPVATILVVVYL IVTVMLLNLLIAILSTEHAQV ENT AFKVSKARIIAHYRTVVDNDVLPAPFNLVQL+L G
Sbjct: 585 SIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIPVALLAALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLG 1022
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 1.200e-123 Identity = 220/383 (57.44%), Postives = 267/383 (69.71%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGLDGIPVALLEAL--LKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTV 1139
S++ +LLE+FERLP+TVR F+E+ CT + EP+++ G + LG P++MI+S Q+ TFC VPL+MDFLS +F GLPDL DT G+L+N L L + D G + +P L L + Q D+ P L F PGAQF VA + A P+ YY VPAMRMLLDFV YV ++AAL Y V FHS TG G DGI++ F+ EG+ A IFI+AG YREG EM GI YFKDQWNVLDAL + L VGLVIR DWTS WGPAFYALSAPL+V VLFFAQ+L FQGPM++VI RMT TLL+FG VM+VVM GF MA HV+FRD + FG T LGLF+AMLGE FF+ F+GGRYD VATIL VVYLF+VTV
Sbjct: 235 SVEALLLEIFERLPRTVRAFDEET-KGGCTGMFEPQIL---GGHHPLGFERPVNMILSKQEQMNTFCNVPLVMDFLSRRFAWGLPDLQDTEGVLRNSEDLKCLGAGLVLGD----GGEDVPSGCKSILSRLSVLLQAAQDDLPNLAFFPGAQFAVAGVAADPSTYYRVPAMRMLLDFVAYVEIIAALGYLVFFHSPTGGVLGDDGISNVEFTWGEGSFAAIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCSVLFFAQVLPFQGPMIKVISRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV 609
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 380 bits (976), Expect = 2.120e-110 Identity = 232/499 (46.49%), Postives = 294/499 (58.92%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYL----------------------EEDGLFRDE---------------HG-----------FGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHR-----FSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQ-----------VIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL 1307
S++ +LLE+ ERLP++VR FE D C ++ EP+ + D PL+M++S Q E FC VPL+MDFL KFTL LP L D +L + +++ +L +EDG DE H FG + + + + QG D P+LT PGAQ IVA + A P Y+ VPAMRM+LD VVY+GM+ ALS FVLFHS ++G D + E CA IFI G ++EGREM R Y +DQWN LD L + FL +GLV R DW S GPAFYAL+APL+V+R LFF QI QGPM+Q V+FRMT LL+FG VM V+++GFTMA HV+FRD + FG++ L LFKAMLG+T FF FSG YD VAT L+VVYLFIVTVMLLNLL+AILST HAQV EN FKVS AR++ HY+ VV ND+LP PFNL+QL++
Sbjct: 525 SVNALLLEVLERLPRSVRSFERDM--DDCRDMFEPKFLDV---FEDFEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGGVKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKHPTLFGSKSLLASFRSP--RALLQGANDRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSY-VEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIV 1015
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 372 bits (955), Expect = 4.360e-107 Identity = 222/475 (46.74%), Postives = 287/475 (60.42%), Query Frame = 3
Query: 6 IDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYL-----------------EEDGLFRDEHGFGLD-----------GIPVALLEA------------LLKGVR-QGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL 1307
+D +LLE+ ERLPQTV+GF+ G C+ V EPEL R + L GPL + + + ++TFC PL+ DFLS +FT GLP L DT +L + +L L +E+G R E G LD G LL++ LL+G G+W+ +LTFLPGAQF +A +V P +YY VPAMRMLLD VY+GM+ S VLFH PG E A A +I AG EG+EM+R Y D WN+LD LG+ + GL++R D ++WG A YALSAPL+ +R+LFFAQ+L+F GPM+QV+F MTA L++FG V++VVM+GF M+ H +F DV+ FG T L LFKAMLGE FF F G +YD VAT L V+YL ++ VMLLNLLIA+LST H++V+ FKVSKARII HYR VVD +LP PFNLVQL+L
Sbjct: 608 VDTLLLEILERLPQTVQGFD--GGMTGCSAVFEPELSREDA--RGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGR-RKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPG------------EAAFAF-YILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLIL 1064
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 365 bits (936), Expect = 2.380e-106 Identity = 226/489 (46.22%), Postives = 285/489 (58.28%), Query Frame = 3
Query: 6 IDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLE---------------------------EDGLFRDEHGFGLD----------------GIPVAL-LEALLKGVR------QGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADH-----RFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL 1307
++++LLE+ E LP++VR FE D+ ++ EP A S D P++MI+S Q E FC PL+MDF+ KFTLGLP + D +L + ++++L EDG F D +D P L LL R QG D P LT P AQFIVA + A Y+ VP MRM+LD VVY+G++ ALS FVLF S +DG AD + + SE CA I G YRE EM R Y +DQWN LD LG+ F +G + R DWT GPAFYALSAPL+V+R LFF QI QGPMV IFRMT LL+FG VM VVMIGFTMA HV+FRD + FG++ L LFKAM GET FF+ FSG YD VAT+L+VVYL IVT++LLNLL+AILST H++VQ+N FK S AR++ HY+ VV ND+LPAPFNL+QL++
Sbjct: 344 VNDLLLEILEGLPRSVRSFERDM--DASGDMFEP----ASLPSKDFETPMEMILSRRQQTEIFCSAPLVMDFIKRKFTLGLPSMRDKKEILADSKEIFHLSGGDVRGNVCLVLGTFVPITVVDADVRREDGPFIDLKAEDMDKKAARADHGQLSAQAWAHPTLLGSNCLLASFRSPRALLQGANDRLPCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQA-EQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPMV--IFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVV 823
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 305 bits (780), Expect = 1.040e-82 Identity = 179/438 (40.87%), Postives = 267/438 (60.96%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGL--DGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRW----DDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQ 1298
++DE+LLE+ E +PQTV+GF+ + C+ + EPE + ++ + GPL +++S Q+ET+C +PL++DF++ KFT GLP L DT G+L L G + +G GL +G AL +G G + +T+ PGA+FI+A ++ P YY+VPA+RM LD V Y+ M+ FV+ H + L+ + F++ +I G E RE+ Y +DQWN+LD ++ L G + R DD +S A YALSAPL AR+LFFAQIL QGPM+QV+F MT L +FG +ML+VM+GF + + ++++ +G+ +F+A LGET + D+FSG +D VAT+L+VVYL ++T+M+LNLL+A+LST HA+V N G +KV++AR+I HY VV+ D LP PFNL Q
Sbjct: 972 AVDELLLEVLEHMPQTVKGFKGEMR--DCSAIFEPETVISRF--HGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVL--------LSNKGFTQTLYGGGLLAEGKVFFFGMALQRGYAGGALSS---ITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIV----FTM--------YIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSR---ALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQ 1379
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 274 bits (701), Expect = 6.580e-78 Identity = 160/290 (55.17%), Postives = 193/290 (66.55%), Query Frame = 3
Query: 501 MRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHR-----FSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQ----------------VIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL 1307
MRM+LD VVY+GM+ ALS FVLFHS ++G D + E CA IFI G ++EGREM R Y +DQWN LD L + FL VGLV R DW S GPAFYAL+APL+V+R LFF QI QGP++Q V+FRMT LL+FG VM V+++GF MA HV FRD + FG++ L LFKAMLG+ FF FSG YD VAT L+VV LFIVTVMLLNLL+AILST HAQV EN FKVS AR++ HY+ VV ND+LP PFNL+QL++
Sbjct: 1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSY-VEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVV 289
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 266 bits (679), Expect = 4.820e-70 Identity = 171/453 (37.75%), Postives = 255/453 (56.29%), Query Frame = 3
Query: 3 SIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRW----DDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKV-----------SKARIIAHYRTVVDNDVLPAPFNLVQLLLRWG 1316
+IDE+LLE+ E +PQTV+GF+ + C+ + EPE + ++ + GPL +++S Q+ET+C +PL++DF+S KFT GLP L DT G+L N E G G +G AL + G + +T+ PGA+FI+A +++ P YY+VPA+RM LD V Y+ M+ FV+ H A F E ++I G E RE+ Y +DQWN+LD ++ L G++ R DD +S A YALSAPL AR+LFF QIL QGP++QV+F MT L +FG +ML+VM+GF + + ++++ +G +F+A LGET +FD+FSG +D VAT L+VVYL ++T+M+LNLL+A+LST HA+V + G +K S+ IA V+ + APF + + +R G
Sbjct: 724 AIDELLLEVLEHMPQTVKGFKGEMR--DCSAIFEPETVISRF--HGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVLLNNTSF---TEPGQTLYGDGLLAEGRVFFFGMALQRSYAGGTLSS---ITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHD-----------AGDTFDWME-IVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQSSR---ALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYKAPVVVWQTSGDKSRGGRIARMLLVIFACAVGAPFWHLVMWVRGG 1151
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 258 bits (658), Expect = 6.820e-68 Identity = 173/444 (38.96%), Postives = 243/444 (54.73%), Query Frame = 3
Query: 6 IDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGFGLDGI----PVALLEALLKGVRQGIW--DNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMSFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGTVMLVVMIGFTMALHVIFRDVEDFGDTLLGL----FKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLL 1307
+D +L E +RLPQTV G G +CT +LEPE S + G PL + P ++ TF PL M+F+ KFT GLP L D H + LE+ L E G + + P ++L L V + +W D LTF PGA FI +VA P YY+VP MRM LD V+ +A + VL + G IA+ F+ I++ A E EM + + Y D+W L + + R D S+WG YA+ +PL+ R+L++AQ++ QG +QV++ M + L QF VM VV++GF M+ +FRDV+ G+TL G F+AMLGE G FD+F G ++D AT+L+V YL ++T+MLLNLLIA+LST H +V+E +VS+AR+ HYR VV D LPAPFNL QL++
Sbjct: 500 VDSILTETLDRLPQTVCGLS--GGMAACTALLEPEEADDSSTYGERG-PLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDG-------HSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPRVGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLF-----EKGSLTIAEMAFA--------IYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVK--GETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVV 916 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig88.17885.1 >prot_Ecto-sp6_S_contig88.17885.1 ID=prot_Ecto-sp6_S_contig88.17885.1|Name=mRNA_Ecto-sp6_S_contig88.17885.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=435bp MLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIback to top mRNA from alignment at Ecto-sp6_S_contig88:495825..499386- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig88.17885.1 ID=mRNA_Ecto-sp6_S_contig88.17885.1|Name=mRNA_Ecto-sp6_S_contig88.17885.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3562bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:495825..499386- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig88:495825..499386- >mRNA_Ecto-sp6_S_contig88.17885.1 ID=mRNA_Ecto-sp6_S_contig88.17885.1|Name=mRNA_Ecto-sp6_S_contig88.17885.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp6_S_contig88:495825..499386- (Ectocarpus species6 EcLAC_371)back to top |