mRNA_Ecto-sp6_S_contig87.17811.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: D7FZB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB4_ECTSI) HSP 1 Score: 358 bits (920), Expect = 5.550e-120 Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 1
Query: 1 MLRPAVSTLSGRSVAAAVSRSSFPGVCAAGDRLERSRTAGSGGVVGCTRGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDADAQLNRFRDGY 570
MLRPAVSTLSGRSVAAAVSR SFPGVCAAGDRLERSRTAGSGGVVGC RGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYN KMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDADAQLNRFRDGY
Sbjct: 1 MLRPAVSTLSGRSVAAAVSRRSFPGVCAAGDRLERSRTAGSGGVVGCRRGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDADAQLNRFRDGY 190
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A7S1DZY1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DZY1_HEMAN) HSP 1 Score: 63.2 bits (152), Expect = 2.180e-8 Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 184 KERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFD 501
K+ K LD K + K+L+AR E S E+ + +I + + R+ H E+ LT KI+LRD AIA LPE LQ + D PL+R + T PPI GFD
Sbjct: 18 KKGKSKGLDGKFLVHAKVLEARGEERYVRSEEQMGLDTEIAKEFARQSMKRHIEQQKWLTRKIRLRDQAIAALPEELQAEGKSMDEESFPLDRHIWTDFPPIKGFD 123
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A7S1SH10_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SH10_9CHLO) HSP 1 Score: 62.4 bits (150), Expect = 1.040e-7 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 1
Query: 181 KKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSD 525
K E+ +L K ++K+L+ + P +LSA + + + G+ ++RK H L+ K++L+ AI LP L+ A D P PLNR VAT TPPI G+ + G++D
Sbjct: 61 KDEQQSSSLGGKVQQMMKVLEPQKVPQAKLSAGDLEEHKQRGKEFSRKKMAEHRAWQKALSEKLRLKLAAIEALPVALREHAASDDFEPFPLNRWVATDTPPIEGYYESKSGVND 175
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A445ACG8_ARAHY (Uncharacterized protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445ACG8_ARAHY) HSP 1 Score: 62.8 bits (151), Expect = 2.010e-7 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+D P EL+ E+ ++ + + Y+R + H ER A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 138 LGLVDEEKIPKYELTVEDGRK---LAKEYSRVLMRKHRERQAKETTLLRLKKEAIEALPEGLREAALVPDLTPFPVNRFMATLTPPIEGYMEK 227
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A834YQV3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YQV3_9MAGN) HSP 1 Score: 62.8 bits (151), Expect = 2.220e-7 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+DA P EL+ E+ +R + + Y+R + H R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 146 LGLVDAEDVPKYELTVEDGRR---LAKEYSRALMRRHRARRAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 235
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A7S2IRI2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IRI2_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 3.760e-7 Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 313 YNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
Y+R H+ A LT I+LR+ AIA LPE LQH ARQPD P+ RR+ T T PIP F K
Sbjct: 80 YSRAKMHEHHRVNAHLTKMIRLREAAIAALPEALQHEARQPDYTTLPIQRRIFTETAPIPDFQLK 144
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A6T7YBG7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7YBG7_9CRYP) HSP 1 Score: 59.7 bits (143), Expect = 4.220e-7 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 208 DKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGF 498
D + L+K L+ + A++ + + I + + R+ N+ +A++ KI+LRD A+A LP LQ R D P P++R +AT+TPPIPGF
Sbjct: 38 DSRFKLLIKALEQKGPKKYVRDAKQMEIDQQIAKEFTRQSFRRENKFLANMQQKIRLRDIAVAALPAELQAEGRTNDMEPYPMDRHMATHTPPIPGF 134
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A1S4BHU9_TOBAC (uncharacterized protein LOC107808434 n=12 Tax=Solanaceae TaxID=4070 RepID=A0A1S4BHU9_TOBAC) HSP 1 Score: 61.6 bits (148), Expect = 4.980e-7 Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+D P E++ E+ +R + + Y+R + H +R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 139 LGLVDVEKLPKYEMTVEDGRR---LAKEYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 228
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A1U8DSZ5_CAPAN (uncharacterized protein LOC107839242 n=4 Tax=Capsicum TaxID=4071 RepID=A0A1U8DSZ5_CAPAN) HSP 1 Score: 61.2 bits (147), Expect = 6.470e-7 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGF 498
L L+D P EL+ E+ +R + + Y+R + H +R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+
Sbjct: 136 LGLVDVEKLPKYELTVEDGRR---LAKAYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKTAALVPDYTPFPVNRFMATLTPPIEGY 222
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Match: A0A835LU59_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LU59_9MAGN) HSP 1 Score: 61.2 bits (147), Expect = 6.630e-7 Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 178 IKKERSGKALDKKTMTL-------LKLLDARPEPMPELSAEEKQRNFDIGRRYNRKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGF 498
+K +++GK DK M L L+DA P EL+ E+ +R + + Y+R + H +R A T +KL+ +AI LP+ L+ AA PD P P+NR +AT TPPI G+
Sbjct: 115 MKLKKNGKEEDKAIMGTPGLDLISLGLVDAEKIPKYELTVEDGRR---LAKEYSRVLMRQHRKRRAAETNLLKLKKEAIQALPDNLKVAALIPDLTPFPVNRYMATLTPPIDGY 225 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig87.17811.1 >prot_Ecto-sp6_S_contig87.17811.1 ID=prot_Ecto-sp6_S_contig87.17811.1|Name=mRNA_Ecto-sp6_S_contig87.17811.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=191bp MLRPAVSTLSGRSVAAAVSRSSFPGVCAAGDRLERSRTAGSGGVVGCTRGback to top mRNA from alignment at Ecto-sp6_S_contig87:334963..337481+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig87.17811.1 ID=mRNA_Ecto-sp6_S_contig87.17811.1|Name=mRNA_Ecto-sp6_S_contig87.17811.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2519bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:334963..337481+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig87:334963..337481+ >mRNA_Ecto-sp6_S_contig87.17811.1 ID=mRNA_Ecto-sp6_S_contig87.17811.1|Name=mRNA_Ecto-sp6_S_contig87.17811.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:334963..337481+ (Ectocarpus species6 EcLAC_371)back to top |