mRNA_Ecto-sp6_S_contig87.17806.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: D7FZB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB7_ECTSI) HSP 1 Score: 377 bits (968), Expect = 2.360e-127 Identity = 171/177 (96.61%), Postives = 174/177 (98.31%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT 1044
MACCLICVKDDPVPGSKLDAYYGNPN+FQI MMEAPCK FLWCAYGSLCLGCAQFAVR+RALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLC+ESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNN LQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT
Sbjct: 1 MACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKTFLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT 177
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: D7FZB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB5_ECTSI) HSP 1 Score: 304 bits (778), Expect = 3.760e-99 Identity = 138/178 (77.53%), Postives = 153/178 (85.96%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTV 1047
MACCLICV D+PVPGSKLDAYY NPNKFQI MMEAPCKN WC +G LC+ CAQF VR+RAL G L +YVCCQGYFP C EPGDCGER CPCFCLC+ESF C SCAVSSSRMYLMDKF VQPDPWDNRIIRFNN LQ+LSCICH AAI V++ RELAR+ D++A+LVY++ VGCMTV
Sbjct: 1 MACCLICVNDEPVPGSKLDAYYENPNKFQIGMMEAPCKNCPWCTFGCLCMCCAQFIVRKRALDGNLANYVCCQGYFPMCCFEPGDCGERDCPCFCLCMESFACTSCAVSSSRMYLMDKFGVQPDPWDNRIIRFNNALQVLSCICHIAAICVREVRELARIIDLIADLVYMTTVGCMTV 178
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: D7FZB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB6_ECTSI) HSP 1 Score: 293 bits (750), Expect = 1.030e-94 Identity = 130/177 (73.45%), Postives = 150/177 (84.75%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT 1044
MACCLICVKDDPVPGSKLD +YGNPN+FQI +MEAPCKN W +G LC CAQF VR+RAL G L++Y+CCQGY+P C GDCGER CPCFCLC+ESF C SCAVSSSRMYLMDKF V PDPWDNRIIRFNNFLQLLSCIC+ AAI +++ RELAR+ D++A+LVY++ VGCMT
Sbjct: 1 MACCLICVKDDPVPGSKLDPFYGNPNQFQIGLMEAPCKNCPWFCFGCLCTCCAQFIVRKRALDGNLENYLCCQGYYPMCCMSAGDCGERSCPCFCLCLESFCCNSCAVSSSRMYLMDKFSVMPDPWDNRIIRFNNFLQLLSCICNIAAICIEEIRELARIIDLIADLVYMTTVGCMT 177
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A835YWZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ0_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.590e-81 Identity = 117/178 (65.73%), Postives = 141/178 (79.21%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCC-EPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT 1044
MACCLIC D+PV GSKL+ +YGN +FQI MMEAPCK L C YGSLC CAQ+ VR+RAL G LD+Y+CCQGYFP CC +PG CGE+ P CLC+ESF C SCAVSSSRM++MDK+ + PDPWDNRIIRFNN LQLLSCIC+C AI V++ RE AR+ D++A +V+ + VGCMT
Sbjct: 1 MACCLICFSDEPVRGSKLEQFYGNNQQFQIGMMEAPCKATLCCCYGSLCSCCAQYTVRKRALDGNLDNYICCQGYFPGCCCMKPGHCGEKSSPACCLCLESFCCLSCAVSSSRMFIMDKYRLLPDPWDNRIIRFNNALQLLSCICNCLAICVEELREFARILDLIAEIVFYTTVGCMT 178
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A6V1R716_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R716_HETAK) HSP 1 Score: 180 bits (456), Expect = 1.850e-50 Identity = 83/179 (46.37%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTVR 1050
MAC L C D+P+ G D Y PN F I M++AP + L C YG + CA + +R++AL G L +Y CCQGY+ C+ G CGE +CP CLCIE++ C SC++S++RM++MD + +Q DP D R+IRFNN LQ LSCICH A F ++ R+LA +VY S GCM +
Sbjct: 1 MACLLFCFSDEPIEG---DERYDRPNMFNIGMIDAPTREPLCCLYGCIFPCCAFYQLREKALDGDLSNYRCCQGYYDRGPCKSGSCGEEQCPALCLCIEAWWCSSCSISATRMFVMDNYFLQSDPMDRRLIRFNNALQCLSCICHVLAAFDRNLRDLAXXXXXXXXIVYYSTAGCMNAQ 176
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A7S2UXX8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXX8_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.070e-49 Identity = 86/179 (48.04%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTVR 1050
M CC IC D P+ G K + N FQ+ M + PC+ C C CAQ+ VR++AL G + +Y CCQGY+ C + G CGE CP CLC+E+ C SCAVSS+RM +MD + +Q DPWD RIIRFNN +Q+LSCICH AAI R+ A L D +A+ VY S CMT +
Sbjct: 1 MYCC-ICFDDGPIEGDKYGQF---SNTFQLSMADVPCQQPACCLGAFFCCPCAQYMVRKKALDGDMTNYKCCQGYYDCLCFKAGHCGEESCPDVCLCLEAVFCNSCAVSSTRMLVMDTYFLQSDPWDRRIIRFNNCMQMLSCICHIAAIIDPSLRDCAVLIDRIADCVYYSVQACMTAQ 175
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A7S2UXW4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXW4_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.040e-48 Identity = 80/177 (45.20%), Postives = 108/177 (61.02%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMT 1044
M CCL+C DDP+ G K Y NPN FQ+ + +A C C C CAQ+ +R++AL + +Y CCQGY+ C + G+ GE CP CLC+E++ C SCAVSS+RM +MD + + DPWD RIIRFNNF Q+LSC+C A+ ++ A L ++A VY S CMT
Sbjct: 1 MVCCLLCFSDDPIEGDK---YGQNPNTFQVSLKDAACAEPACCIGTFFCPCCAQYYIRKKALNDDMSNYTCCQGYYDCACFKAGNLGESSCPELCLCLEAYCCESCAVSSTRMLVMDTYMLASDPWDRRIIRFNNFCQVLSCVCQILAMVEPSLQDCAELIRLIAECVYYSVQACMT 174
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A2R5GIB4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIB4_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.520e-47 Identity = 80/189 (42.33%), Postives = 118/189 (62.43%), Query Frame = 1
Query: 514 MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQD-----FRELARLTDVLANLVYLSAVGCMTVRSSPSM 1065
ACC C DDPV D + N++++ M +AP + LWC YG+ C CA + +R RALG +++Y CCQGY C PG+ GE CP FCLC+E C SC++S++R +MD++ + DP DNRIIRFNNF+Q+LSC+ + +I +++ FRE A++ D++A +VY+ GCM + M
Sbjct: 5 FACCF-CFPDDPVED---DPRIQHANRWKVLMKDAPTEETLWCCYGAFCPVCAAYQLRTRALGYNMNNYRCCQGYLQFCCISPGNMGEENCPEFCLCMEVCCCLSCSISATRFMIMDQYSIVSDPCDNRIIRFNNFMQILSCVLNLLSICIEELYVRIFREAAQIVDLIAKIVYMVTFGCMAAQMKSEM 189
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A484EEY5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEY5_BRELC) HSP 1 Score: 165 bits (418), Expect = 3.580e-45 Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query: 523 CLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFP--THCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTVRSSPSMR 1068
C++C DPV D NP FQ+ MM AP + L C LC CAQ +R++AL + +Y CCQGY C G CGE CP FCLC+ESF C CAVS++RM +MD++ +QPD WDNRIIR NN +QL+SC+C +I + + +LA L +A Y + GCMT + + +R
Sbjct: 2 CILC-SGDPVED---DVRKNNPGSFQVGMMHAPGADPLCCMSACLCPCCAQIVIRRKALNYDMSNYTCCQGYMDGLVPCARSGQCGESSCPNFCLCLESFCCNGCAVSATRMLVMDRYRLQPDKWDNRIIRCNNCIQLVSCVCSLLSICISELGDLADLMYCIAQCTYATTQGCMTAQVNVELR 181
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Match: A0A024G979_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G979_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.550e-42 Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 1
Query: 523 CLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLGCAQFAVRQRALGGRLDDYVCCQGYFP--THCCEPGDCGERRCPCFCLCIESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNFLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTVRSSPSMR 1068
C++C PV G D N N+F + MM APC + C C CAQ+ +R++AL + YVC QGY C G CGER CP CLC+ES+LC CAVS++RM +MD++ ++PD WDNRIIR NN +QLLSC+C C AI + + A Y++ GCMT + + ++
Sbjct: 2 CILC-SGSPVDG---DVRGQNSNEFMVGMMSAPCSSPCCCLASCFCPCCAQYIIRRKALDNDMSKYVCFQGYLDGVIPCLRSGQCGERSCPHCCLCLESWLCNGCAVSATRMLVMDRYNLRPDKWDNRIIRCNNCIQLLSCVCSCLAICISELGNXXXXXXXXAQCTYMTTQGCMTAQVNVELK 181 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig87.17806.1 >prot_Ecto-sp6_S_contig87.17806.1 ID=prot_Ecto-sp6_S_contig87.17806.1|Name=mRNA_Ecto-sp6_S_contig87.17806.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=264bp MACCLICVKDDPVPGSKLDAYYGNPNKFQIRMMEAPCKNFLWCAYGSLCLback to top mRNA from alignment at Ecto-sp6_S_contig87:310132..314141+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig87.17806.1 ID=mRNA_Ecto-sp6_S_contig87.17806.1|Name=mRNA_Ecto-sp6_S_contig87.17806.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4010bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:310132..314141+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig87:310132..314141+ >mRNA_Ecto-sp6_S_contig87.17806.1 ID=mRNA_Ecto-sp6_S_contig87.17806.1|Name=mRNA_Ecto-sp6_S_contig87.17806.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:310132..314141+ (Ectocarpus species6 EcLAC_371)back to top |