mRNA_Ecto-sp6_S_contig87.17796.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A6H5JAT5_9PHAE (MinC_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT5_9PHAE) HSP 1 Score: 597 bits (1539), Expect = 6.500e-211 Identity = 361/434 (83.18%), Postives = 371/434 (85.48%), Query Frame = 1
Query: 1 MLRRVSWRTSTSSITSXXXXXXXXXXSPERRRSYLERWAGIRGPSVPPASRSVEAPSPSTPTPPVSLFGRTYLLSTIKVPPFPTATTPTGSSTANSRRVNGAAXXXXXXXXXXXXXXRVFERMREALQGPGALGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLVVDTPTNVCLRENELVFHSFDLSAANP 1302
+LRRVSWRTSTS XXXXXXXXXX ERRRSYLERWAGIRG PPASRS EAPSPST TPPVSLFGRTYLLSTIKVPP P ATTPTGSSTANSRRVNGAA RVF+ MREALQGPGALGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGV NASHDVLKTASEQGLPE+MMVHAR RSSPPQVAASRSTRNH VEQ VPVRASDAAESV + PPSAAPSG SAPAP+ T+A GEGEEGRR+GGS CS PAPAT E SG+SLSEE S RETMVYQGSVRSGQQVFAEGTSL XXXXXXXXXX GDIHVYG LRGRALAGLSGNKSAKIFATRFDAELVGVGE+FTTLDSPE+LAGLVVD PTNVCLRENELVFHSFDLSAANP
Sbjct: 35 VLRRVSWRTSTSXXXXXXXXXXXXXXX-ERRRSYLERWAGIRGSPAPPASRSAEAPSPSTRTPPVSLFGRTYLLSTIKVPPIPAATTPTGSSTANSRRVNGAAAGGEKDEEE-----RVFQWMREALQGPGALGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVSNASHDVLKTASEQGLPELMMVHARPRSSPPQVAASRSTRNHSVEQTVPVRASDAAESVAQMPPSAAPSGASAPAPSTTAASGEGEEGRRKGGSPCSGAAPAPATDSE----------GSGTSLSEEGSDRETMVYQGSVRSGQQVFAEGTSLXXXXXXXXXXXXXXXGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGESFTTLDSPENLAGLVVDAPTNVCLRENELVFHSFDLSAANP 452
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: D7FZC7_ECTSI (MinC_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC7_ECTSI) HSP 1 Score: 545 bits (1405), Expect = 9.520e-193 Identity = 305/312 (97.76%), Postives = 306/312 (98.08%), Query Frame = 1
Query: 367 MREALQGPGALGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLVVDTPTNVCLRENELVFHSFDLSAANP 1302
MREALQGPG LGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHAR RSSPPQVAASRSTRNHG EQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGG SCSVVEPAPATTGEQEEDRNSH ERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYG LRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLVVDTPTNVCLREN+LVFHSFDLSAANP
Sbjct: 1 MREALQGPGVLGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARPRSSPPQVAASRSTRNHGAEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGGSCSVVEPAPATTGEQEEDRNSHSERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLVVDTPTNVCLRENKLVFHSFDLSAANP 312
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A485LKA1_9STRA (Aste57867_21970 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKA1_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.840e-28 Identity = 104/288 (36.11%), Postives = 147/288 (51.04%), Query Frame = 1
Query: 433 PVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKI----FATRFDAELVGVGETFTTLDSPESLAG--LVVDTPTNVCLRENELVFHS 1278
PVVLDL VS +GSPH P + L RA++ A +VP+G+ NAS DV KT + + L ++ +RL ++AA S G P SD +V + GT A A +A E AP++TG + + S + SG MV +GSVR+GQQ++A+G L+V+G DGDIHVYG L+GRALAG+ G+ +AK+ +A +FDAEL+ + +TFTT D+ E+ +V D PT V L + L F S
Sbjct: 66 PVVLDLSNVSSNGSPHVSPIKSSELRSLVRALKEANVVPIGITNASEDV-KTMAMRVLQMPNLIGSRLNDQEVRIAALDSAIVEGETPP-----SDPFTTVTE--------GTYAKADVTDAAS----------------PEAAPSSTGADDVKQTSLV--SG-----------MMVVEGSVRTGQQIYAKGQGLIVMGSVNSGAEVLADGDIHVYGVLKGRALAGIGGHTTAKVRIAVYAQKFDAELISIADTFTTCDALEARESGDVVDDRPTIVWLEDGVLRFKS 310
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: K3XBV6_GLOUD (MinC_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBV6_GLOUD) HSP 1 Score: 116 bits (291), Expect = 1.090e-25 Identity = 93/285 (32.63%), Postives = 133/285 (46.67%), Query Frame = 1
Query: 430 SPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDS--PESLAGLVVDTPTNVCLRENELVFHS 1278
+P+VLDL VS DGSPH +P + L A++ G VPVG+ NAS D+ + A+ LP + RLR Q + + P + ES V +E + +T + + + H++ + ++SE+ SG MV SVRSGQQ+FA+ SLV+LG D D+ V GAL+GRALAG+ GN SA+I FDAEL+ + FTT D + A L + PT V L+++ L F S
Sbjct: 82 TPIVLDLQQVSSDGSPHAQPIKKHELRAEIEALQNVGFVPVGITNASEDIKQLAAAMNLP--YFISTRLRVPQEQYSEITEPQQQQPYDKAPTAVAKEEESEVS-----------------------------------DTIESSASTPDQNAQQDSPHVDVTPPAVSEK-SGLPPMVVTASVRSGQQIFAQNRSLVILGNVNSGAEVLADEDVFVMGALKGRALAGIGGNVSARIICQSFDAELISIAHHFTTCDELDEQKHAALRMHKPTVVSLQDDFLHFQS 328
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A1V9ZBU1_9STRA (MinC_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBU1_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.650e-25 Identity = 92/290 (31.72%), Postives = 139/290 (47.93%), Query Frame = 1
Query: 433 PVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTA-SEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPA--PATTGEQ---EEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPES--LAGLVVDTPTNVCLRENELVFHS 1278
PV+LDL VS +GSPH P + L A++ L P+G+ NAS DV A + LP ++ R+ +R N +E+ + E E+ S+ +++E PATT + ++++ + + +G M+ +GSVR+GQQV+A+ L+V+G DGDIHVYG L+GRALAG+ GN +AK+FA +FDAEL+ + +TFTT D E+ L +V D PT + L + L F S
Sbjct: 53 PVILDLENVSSNGSPHNSPIRSSELRSLLHALKGIHLYPIGITNASQDVKTMAWNSHQLPS--LIGTRMDEEQSDGELTRMAMNQLLEEAI-----------------------------------EKED------STANIIEERIEPATTNAETPLKDEKTNTLPNAG-----------MMLVEGSVRTGQQVYAKDQGLIVMGSVHSGAEVLADGDIHVYGTLKGRALAGIGGNNNAKVFAQKFDAELISIADTFTTCDELEARELGTIVEDKPTIIWLENSVLRFKS 288
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A1V9YDL4_9STRA (MinC_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDL4_9STRA) HSP 1 Score: 114 bits (284), Expect = 6.640e-25 Identity = 93/284 (32.75%), Postives = 136/284 (47.89%), Query Frame = 1
Query: 433 PVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPES--LAGLVVDTPTNVCLRENELVFHS 1278
PVVLDLG+VS +GSPH P + L A+R L P+G+ NAS D+ K + + L ++ R+ + +R N +E + +AA++++ +E S S PAT +E S M+ +GSVR+GQQV+A+ L+V+G DGDIHVYG L+GRALAG+ GN AK++A +FDAEL+ + +TFTT D+ E+ + +V D PT V L + L F S
Sbjct: 68 PVVLDLGSVSSNGSPHNTPIRASELRSLIYALRGENLHPIGITNASEDI-KAMAWKNLQVPSIIGTRMDDEG-EGEMTRVAMNQLMEDAI--GNVEAAQAII-------------------------DERLDEAPQSVSESSTVPAT--------------------KEPSVMSMMLVEGSVRTGQQVYAKEQGLIVMGSVNSGAEVLADGDIHVYGTLKGRALAGIGGNVRAKVYAHKFDAELISIADTFTTCDALEAREVGHIVSDKPTVVWLEDGALQFKS 302
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: T0S5F8_SAPDV (Septum site-determining protein MinC n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S5F8_SAPDV) HSP 1 Score: 111 bits (278), Expect = 4.690e-24 Identity = 91/286 (31.82%), Postives = 131/286 (45.80%), Query Frame = 1
Query: 433 PVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTR--NHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPES--LAGLVVDTPTNVCLRENELVFHS 1278
PV+LDL VS +GSPH P + L A+R+ L P+G+ NAS D+ K + + L ++ RL A+ R H + + + +AA++++ G R S P A + R MV +GSVR+GQQV+A+ LVVLG DGDIH+YG L+GRALAG+ GN AK++ +FDAEL+ + +TFTT D+ E+ + +V D PT V L + L F S
Sbjct: 68 PVILDLANVSSNGSPHNSPIRSSELRSLIYALRSENLHPIGITNASEDI-KAMAWKSLQVPSIISTRLEDDGDYEASDAMNRVAMHQLMEEA-MGHEEAAQAII---------------------------GERLDTPSAPAETPVVAAIASTQ--------------------RGMMVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALEAREIGHVVDDKPTIVWLEDGALQFKS 304
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A5D6XXU1_9STRA (MinC_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXU1_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.140e-23 Identity = 105/291 (36.08%), Postives = 137/291 (47.08%), Query Frame = 1
Query: 430 SPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTS-ALGE-----GEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLA--GLVVDTPTNVCLRENELVFHS 1278
+P+VLDL VS DGSPH +P + L ++ AG +PVGV NAS DV + A+ LP + STR G P P+ A ++A+ + A P R S A G GE+G P P+TT E N+ + SL MV SVRSGQQ+FA+ SLVVLG D D+ V GAL+GRALAG+ GN SA+I FDAEL+ + FTT D + GL PT V L++++L F S
Sbjct: 71 TPIVLDLRLVSSDGSPHAQPIKKHELRAEIERLQNAGFLPVGVTNASEDVKQLAAAMNLPYFI-----------------STRLQG-PAPTPLDAYESADDNLSV-----DGAQDAGRPQRDSIAFGSTPAASGEQG----------ATPTPSTTPSAAE-TNARVAAVAPSL------LPPMVVTTSVRSGQQIFAQNRSLVVLGSVNSGAEVLADEDVLVMGALKGRALAGIGGNVSARIICQSFDAELISIAHHFTTCDELDERKHRGLRAHKPTIVSLQDDQLHFQS 321
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A6G0XUR6_9STRA (MinC_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUR6_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.140e-23 Identity = 94/284 (33.10%), Postives = 132/284 (46.48%), Query Frame = 1
Query: 433 PVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARLRSSPPQVAASRSTRNHGVEQPVPVRASDAAESVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGSSCSVVEPAPATTGEQEEDRNSHIERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESL--AGLVVDTPTNVCLRENELVFHS 1278
PVVLDL VS +GSPH P + R+++ A L+P+G+ NAS DV A + V P V S + N G V +A + V EE S + +E ++ + N IE + +S + + SVR+GQQ++A+G +L+VLG DGDIHVYG L+GRALAG+ GN AK+FA +FDAEL+ + +TFTT D+ E+ +V D PT V L + L F S
Sbjct: 66 PVVLDLSNVSSNGSPHVSPVKASEFRSLVRSLKDANLIPIGITNASEDVKNMAWR-----TLQV--------PSVIGSDISDNDGRINFVSNGVPEAEDHFVL------------------------EE-------SYTKIEDTTESSSVTSDHSNETIESTRPQISG------MKIVESSVRTGQQIYAKGQNLIVLGSVNSGAEVLADGDIHVYGVLKGRALAGIGGNTEAKVFAQKFDAELISIADTFTTCDALEARERGDVVDDRPTVVWLEDGVLQFKS 299
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Match: A0A4D9CRC4_9STRA (MinC_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRC4_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.240e-21 Identity = 65/117 (55.56%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 958 MVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGALRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLA-------GLVVDTPTNVCLREN--ELVFHSF 1281
MV +GSVR+GQQV AEGTSLVVLG DGDIH+YG L GRALAGLSG+ AKIFA RF+AELV +GE FTT D E G VV P +V L E +L+F +F
Sbjct: 243 MVVEGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGHVRAKIFAGRFNAELVAIGEVFTTCDVGEGGGRGRREGCGAVVGGPASVSLEEKTGQLLFRTF 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig87.17796.1 >prot_Ecto-sp6_S_contig87.17796.1 ID=prot_Ecto-sp6_S_contig87.17796.1|Name=mRNA_Ecto-sp6_S_contig87.17796.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=435bp MLRRVSWRTSTSSITSNSSNSSSGSSSPERRRSYLERWAGIRGPSVPPASback to top mRNA from alignment at Ecto-sp6_S_contig87:207570..213379+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig87.17796.1 ID=mRNA_Ecto-sp6_S_contig87.17796.1|Name=mRNA_Ecto-sp6_S_contig87.17796.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5810bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:207570..213379+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig87:207570..213379+ >mRNA_Ecto-sp6_S_contig87.17796.1 ID=mRNA_Ecto-sp6_S_contig87.17796.1|Name=mRNA_Ecto-sp6_S_contig87.17796.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:207570..213379+ (Ectocarpus species6 EcLAC_371)back to top |