mRNA_Ecto-sp6_S_contig87.17792.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A6H5KTP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP2_9PHAE) HSP 1 Score: 956 bits (2471), Expect = 0.000e+0 Identity = 540/637 (84.77%), Postives = 556/637 (87.28%), Query Frame = 1
Query: 1 MQAVPESFLRRSTLGATRGFGLRLALLXXXXXXXXXXAVVPPRQHSSSCGFLLAPSRVHFNTGSSSASAASFFGMGASPSRTASSPSPEQRSGLLGKGVSGSNDDVVGDGYGAAGSSTRLQATAPTGNDIDPEDPSAAAAGLRSGDADGGIDAYLPIGTDSNGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARPIAGFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRHFFDRRGPLYLGSTAAAAVSPKGEDAAAVGIGVVV----DDGDRNVLGNDEE 1899
MQ PES LR STLGA R FGLRLAL+ XXXXXX AVVPPRQH S CGFLLAPSRVHFNT SSSA+AASFFGMGASPSRT SSPS +QRSGLLGKGVSGSNDDVVGDGYGAAGSSTRLQATAPTG D+DPED SAAAAGLRSGDADGGIDAYLP G D NGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAAR AL+ VL++ +V R GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVG TAIAAHQVCNQLYLLLAFAADSLAVAAQG+VADRLGGGM+AEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLN YVFVGDGILQGTQDFVYEALTMVVSATTLPLY+WLRGYLGGGETTLLDVWM LVVMQ+CRS+TFTFRHFFDRRGPLY+GSTAAA DD D+NVLGNDE+
Sbjct: 27 MQDAPESNLRGSTLGAARVFGLRLALVLLXXXXXXAEAVVPPRQHPS-CGFLLAPSRVHFNTPSSSATAASFFGMGASPSRTTSSPSLQQRSGLLGKGVSGSNDDVVGDGYGAAGSSTRLQATAPTGGDLDPEDRSAAAAGLRSGDADGGIDAYLPSGADDNGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAAR------ARALSAPAVLMM----------------SVGNGAFR---GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGSTAIAAHQVCNQLYLLLAFAADSLAVAAQGVVADRLGGGMIAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNSYVFVGDGILQGTQDFVYEALTMVVSATTLPLYVWLRGYLGGGETTLLDVWMGLVVMQTCRSVTFTFRHFFDRRGPLYMGSTAAAXXXXXXXXXXXXXXXXXXXXXXDDSDKNVLGNDED 637
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: D8LQW2_ECTSI (Mate efflux protein, multi antimicrobial extrusion family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW2_ECTSI) HSP 1 Score: 827 bits (2135), Expect = 2.280e-295 Identity = 450/462 (97.40%), Postives = 454/462 (98.27%), Query Frame = 1
Query: 223 MGASPSRTASSPSPEQRSGLLGKGVSGSNDDVVGDGYGAAGSSTRLQATAPTGNDIDPEDPSAAAAGLRSGDADGGIDAYLPIGTDSNGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARPIAGFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 1608
MGASPSRTASSPSP+QRSGLLGKGVSGSNDDVV DGYG AGSSTRLQATAPTGND+DPEDPSAAAAGLRSGDADGGIDAYLPIGTD NGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLV+LEFFGVHLLQLLGATAVNEDQ GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAP+IAVVGLLQPLNGYVFVGDGILQGTQDFVYE
Sbjct: 1 MGASPSRTASSPSPQQRSGLLGKGVSGSNDDVVDDGYGTAGSSTRLQATAPTGNDLDPEDPSAAAAGLRSGDADGGIDAYLPIGTDGNGEASAKSKNDGLSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVLLEFFGVHLLQLLGATAVNEDQ-----GFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPVIAVVGLLQPLNGYVFVGDGILQGTQDFVYE 457
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR) HSP 1 Score: 261 bits (666), Expect = 2.230e-75 Identity = 177/437 (40.50%), Postives = 242/437 (55.38%), Query Frame = 1
Query: 532 ILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGA------TAVNEDQARPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNRE-------GWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRH 1758
IL++A+PAL L+ DPL+S VDTA++GRL G + L AL +NT +F+ +F +FNFLA TP VA + +GD + A R + Q LT AL G + + L+ F LL+L+GA A+ + R +AG + DT+TP L+ L N +N LDP+ IF FGWGL GAA ATV A+WAG + F+ +L + ++ + V+LP+ E GW+ + RT AL L ATA A RVG +AAHQV QL+L LA D+LAVAAQ LVA G G R VA RL+ +G G+G+ F +F VLP +FT D V+ A+ + V L+QPLN VFV DG+L G +DF Y AL M+VSA L + L LG G T VW + + R +T ++R+
Sbjct: 14 ILALALPALGTLAADPLVSLVDTAFVGRL------GSVPLAALGVNTALFSLAFVVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWAGALGFVWVLFARRRALGIS-VALPRFAELRPFVRVGWE-----------LLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAACGALVLLLVLPLGWGLT---GVWWGVATLMGVRLVTLSWRY 429
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A4Y6PVI4_9DELT (MATE family efflux transporter n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PVI4_9DELT) HSP 1 Score: 251 bits (642), Expect = 8.390e-72 Identity = 176/429 (41.03%), Postives = 241/429 (56.18%), Query Frame = 1
Query: 529 QILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQA------RPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQ---KEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLT 1743
+IL +AVPAL +L+VDPL+S VDTA++G+ LGAL +N ++F +F IFNFLA TP V +A +GD K A +++ Q T ALA G + L +L+ F +L L+GAT + A R AG + DT+T +++ +A N +N VLDPILIF GWG+ GAA ATV A+W G + F+ LL + +E I L +L + + GS++L RT AL G + ATA AARVG A+AAHQV NQL+ LA D+LAVAAQ LVA LG G V E R+V+ RL+ +GLG+G + F VLP +FT + + +A + I V +LQP+NG VFV DGI G + F + A MVVSA + L +G G L VW + + R +T
Sbjct: 13 EILRLAVPALGSLAVDPLVSLVDTAFVGQXXXXP------LGALGINASLFAMTFVIFNFLAYGTTPRVGNALGRGDRKAAGQVVIQAFTLALAAGALALALLQIFAGPILTLMGATGELREPAMTYLRIRAFAGPAVLLLNVGHGAFRGYQDTRTAMVVTIALNLVNLVLDPILIFGLGWGIAGAATATVIAQWLGALTFVWLLLKSRREELGIELVRPTLEQMLPFLRIGSSLLL-------RTGALVGTMTLATAVAARVGVVAVAAHQVANQLWGFLALVVDALAVAAQALVAKHLGSGDVDEARDVSDRLLQWGLGVGAVLALGFAALRPVLPGLFTDEAQTVARVMDIFIFVAVLQPINGVVFVWDGIYMGAEKFGFLAKAMVVSAAGAVAVLLLTRPMGWG---LEGVWWGITALMLVRVVT 425
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: L1JL45_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JL45_GUITC) HSP 1 Score: 250 bits (639), Expect = 1.040e-71 Identity = 164/423 (38.77%), Postives = 249/423 (58.87%), Query Frame = 1
Query: 520 LSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQARPIAGFLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRHFFDRR--GPL 1782
+ +I S+A+PAL +L++DPL+ VDT Y+GR+ + L AL + +++F ++F+IFNF AT TP ++ A A G+++ AA + Q LTAA LGV + +LEFF +++ +G + R G DT+TPLLI L AN +NFVLDP+ I+ GA +AT AEW F+ L Q+E ++ +S+P +R ++ +L +S AVF R++ALQ L AT+ AAR G A+AAHQV Q++LL++FA DSLAVAAQ L+A+ LG G + R +A RL +G+ ++ F LP +FT+D KV + ++ + ++QP+N VFVGDGILQG++DF + M V+A + L + + G VW LVV+Q R+ +R++ + GPL
Sbjct: 10 IDNRIFSLAIPALGSLAIDPLLGLVDTLYLGRIPSPSP-----LAALGVCSSIFNYAFFIFNFFATATTPLISRALAAGEKEEAAETLAQALTAAALLGVSTVGLLEFFSHGIIESMGT--IGNGAFR---GLQDTRTPLLILLVANLVNFVLDPLFIYGVNIN-SGAGLATAIAEWISAGLFMGTLRQRE-AVTSSLMSMPASRLHGRDEHPLLVASGAVFLRSIALQSVLTFATSQAARTGTEAVAAHQVGLQVWLLMSFAVDSLAVAAQTLIAEELGKGSKRDARVIADRLTTLAAQIGLLLMLAFLASSSFLPKVFTADAKVDEIVQHLLLYISVMQPINALVFVGDGILQGSEDFAFLTKAMFVAAASSLLVLLAGEGIDG-------VWSGLVVLQVMRAAGLGWRYYGGKAAGGPL 413
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A6C1NP02_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6C1NP02_9BACT) HSP 1 Score: 249 bits (635), Expect = 8.480e-71 Identity = 182/445 (40.90%), Postives = 241/445 (54.16%), Query Frame = 1
Query: 529 QILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQA------RPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNRE---GWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEG----REVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRHFFDRRGP 1779
+I ++A+PAL AL+ DPL+S VDTA++GRL G + L AL +N +VF +F +FNFLA TP VA A +GD R++ Q L A+A GVV +L +L ++GAT + A R +AG DT+TPL I LA N +N VLDPILIF GWGL+GAA ATV A+WAG +AF+ L+ ++ P+ E + G +L RT AL G L ATA A RVG +AAHQV QL++LLA DSLAVAAQ +V G EG REV RL+++G G+GV L +F V LP IFT D + A+A ++ V +QPLN VFV DGI G +DF Y A+ MV+SA + L +G G L VW + + R+ T R ++ RRGP
Sbjct: 15 EITALAIPALGALAADPLVSMVDTAFVGRL------GTVPLAALGVNASVFAMTFVVFNFLAYGTTPRVARALGRGDRGEVGRVVLQALVLAVAAGVVATALLLALAGPILSVMGATGELREPAMAYLRIRALAGPAVLLIMAGHGVFRGLQDTRTPLRITLALNVVNLVLDPILIFGLGWGLEGAAWATVVAQWAGALAFVRLIFGPRRAMLGESPRWPRPAELLPFLRVGGELLL-------RTGALIGTLTLATAVATRVGTAQVAAHQVAVQLWMLLALVVDSLAVAAQAMVGKYRGADESREGVAVLREVTNRLLLWGAGVGVVLLGLFWVAAPWLPRIFTDDPLTLLAVAAVLPFVVFMQPLNALVFVWDGIFMGAEDFRYLAVQMVLSALAAAGILLLVLPMGWG---LAGVWWGITALMGVRAATLAVR-YWGRRGP 442
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A2A8CUL0_9BACT (MATE family efflux transporter n=2 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8CUL0_9BACT) HSP 1 Score: 248 bits (634), Expect = 1.120e-70 Identity = 174/426 (40.85%), Postives = 237/426 (55.63%), Query Frame = 1
Query: 532 ILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGAT------AVNEDQARPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLA-QKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLT 1743
IL +AVPAL L+ DPL+S VDTA++G+L G I L AL +N ++F+ +F IFNFLA TP V A GD + A+R++ + + A+ G V L++L+ F +L+L+GA A+ + R AG + DT+TP+ + + N +N LDPILIF F WGL GAA ATV A+W G + FLVLL ++ + +RP+ +PK R A LT +F RT AL G + ATA A R+G TA+AAHQV QL+L LA D+LAV+ Q LV+ LG G R V+ RL+ +GLG+G+ V F VLP FT D IAA+ I V +LQPLNG VFV DG+ G + F Y A M++SA + L + G L VW + + R LT
Sbjct: 13 ILDLAVPALAGLAADPLVSLVDTAFVGQL------GPIPLAALGINASIFSMTFVIFNFLAYGTTPRVGRAIGTGDREEASRVVMRAILLAILSGAVALLLLQVFAEPILRLMGADDGLLGPALTYLRIRACAGPAVLLITASHGAFRGYQDTRTPMKVTIGFNIINATLDPILIFGFDWGLAGAATATVAAQWIGALTFLVLLLHRRREELGIRPL-VPKLRSL----GAFLTIGRDLFIRTSALVGTMTLATAIATRIGTTAVAAHQVAAQLWLFLALLVDALAVSGQALVSKHLGAGDEDAARSVSNRLLQWGLGVGILLGVAFYGLQPVLPDFFTDDAATIAAVLTIFPFVAVLQPLNGLVFVWDGLYMGVEAFSYLAKAMLLSAGAAAAVLLLTIPMNWG---LAGVWWGITTLMGVRLLT 424
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A847HV96_9DEIN (MATE family efflux transporter n=1 Tax=Deinococcales bacterium TaxID=2478479 RepID=A0A847HV96_9DEIN) HSP 1 Score: 248 bits (633), Expect = 1.640e-70 Identity = 166/434 (38.25%), Postives = 235/434 (54.15%), Query Frame = 1
Query: 520 LSGQILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGAT------AVNEDQARPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRH 1758
L+ I S+A+PAL L+ DPL+S VDT ++GRL G L AL +NT +F+ F +FNFLA TP V A +GD A ++ A+ G + L++++ V LL+++G A+ + R AG FLDT+TPL L N +N VLDP+ IF FGWGL GAA AT+ A+W G AF++ L + V +PK W+E + L + + RT +L G L ATA AARVG +AAHQV +QL+L L+ DSLAVAAQ LVA G G+ R VA R+I +G LGV ++F + +L +FT+D V+AA+ + + ++QPLN VFV DG+ G ++F + A MV++A + L LG G LL VW ++ + R LT R+
Sbjct: 15 LNRTIASLALPALATLAADPLVSLVDTFFVGRL------GAAPLAALGVNTALFSMVFMVFNFLAYGTTPMVGRALGRGDRAAAEAVVAHAFVLAVGAGALALLLMQALAVPLLEVMGTAPELMPDALTYLRVRAFAGPALLLITAGNGAYRGFLDTRTPLRFALLLNLVNLVLDPLFIFGFGWGLAGAAYATLIAQWVGAAAFVLGLVRGP-----HRVPVPKRLPAWRELAPFLRVGSDMLLRTSSLVGTLTLATAIAARVGVVEVAAHQVASQLWLFLSLTIDSLAVAAQALVATEAGRGVPGGARRVADRVIAWGFALGVAQALLFLLAKPLLVGLFTTDPAVVAALDSVYLFIVVMQPLNAVVFVLDGVFMGAEEFRFLARAMVIAAAVAAALLLLVLPLGWG---LLGVWWGMIALMLVRGLTLVLRY 434
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A2H3NK95_9BACT (MATE family efflux transporter n=1 Tax=Longimonas halophila TaxID=1469170 RepID=A0A2H3NK95_9BACT) HSP 1 Score: 246 bits (629), Expect = 4.800e-70 Identity = 180/444 (40.54%), Postives = 236/444 (53.15%), Query Frame = 1
Query: 532 ILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGATAVNEDQA------RPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKE----------PSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRHFFDR 1770
I +A+PAL L+ DPL+S VDTA++G+L G + L AL +N ++F+ +F IFNFLA TP V GD A R++ + + AL G L +L+ V LL+L+GAT + A R AG + DT+TP+ + + N +N VLDPILIF GWGL GAA+ATVTA+W G +AF+VLL + P+ R LP R G + RT AL G + ATA AARVG TA+AAHQV QL+L +A D+LAVAAQ LVA LG R V+ RL+ +GL LG G + F + VLP FT D I AI + VV LLQPLNG+VFVGDGI G + F Y A M++SA + L +G G L VW + V+ R+LT + R
Sbjct: 11 IFHLAIPALAGLATDPLVSLVDTAFVGQL------GRVPLAALGVNASLFSMAFVIFNFLAYGTTPRVGRHVGTGDRDAAGRVVVRAVVLALVTGAAALAVLQAAAVPLLRLMGATGELLEPALAYLRIRAFAGPAVLLITAGHGAFRGYQDTRTPMYVTIGLNLVNLVLDPILIFGLGWGLTGAAVATVTAQWIGALAFMVLLFRTYRADFHITWFWPAPR---ALLPLLRVGRD-----------LIMRTAALVGTMTLATAVAARVGVTAVAAHQVAAQLWLFMALVVDALAVAAQALVAKHLGAEAPERARTVSNRLLGWGLLLGCGLGIGFGLLRPVLPGFFTDDAATIQAILTVFPVVALLQPLNGFVFVGDGIYMGAERFPYLAKAMLLSAGGAAGVLLLVQPMGWG---LSGVWAGITVLMVLRTLTLAVPYLRGR 431
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Match: A0A2T2V6T3_9BACT (MATE family efflux transporter n=1 Tax=Bacteroidetes bacterium QS_8_68_28 TaxID=1919110 RepID=A0A2T2V6T3_9BACT) HSP 1 Score: 247 bits (630), Expect = 1.120e-69 Identity = 169/430 (39.30%), Postives = 234/430 (54.42%), Query Frame = 1
Query: 532 ILSIAVPALVALSVDPLMSAVDTAYIGRLAAEHGGGEIGLGALALNTNVFTFSFYIFNFLATVPTPFVASARAKGDEKGAARLIGQLLTAALALGVVLLVMLEFFGVHLLQLLGAT------AVNEDQARPIAG---------------FLDTKTPLLIGLAANGLNFVLDPILIFQFGWGLQGAAIATVTAEWAGVMAFLVLLAQKEPSIRLRPVSLPKNREGWKEGSAVLTSSAAVFGRTVALQGALGTATAFAARVGPTAIAAHQVCNQLYLLLAFAADSLAVAAQGLVADRLGGGMVAEGREVAGRLIVFGLGLGVGTLVIFQVFGGVLPLIFTSDQKVIAAIAPIIAVVGLLQPLNGYVFVGDGILQGTQDFVYEALTMVVSATTLPLYIWLRGYLGGGETTLLDVWMALVVMQSCRSLTFTFRH 1758
IL++AVPAL L+V PL+S VDTA++G+L G + L AL +N +VF+ SF +FNFLA TP VA A +GD + A R + Q LT A LG+ ++LE +L+ +GA+ A+ + R +AG + DT+TPL + LA N +N LDP+LIF GWGL GAA AT A+W G + FL LL ++ + ++ P+ W+ + + + RT+AL G + ATA AARVG +AAHQV Q + LLA D+LAVAAQ LVA LG E R VA RL+V GL +G + F LP +FT D + + V L+QPLN VFVGDG+ G +DF + A M SA + + L +G G L VW LV + + R++T R+
Sbjct: 47 ILALAVPALGTLAVGPLVSLVDTAFVGQL------GRVPLAALGVNASVFSLSFILFNFLAYATTPRVAGAYGRGDREEAGRAVVQALTLAAGLGLAATLVLEAAAPLILRAMGASGDLMPPALRYLRIRALAGPAVLLVLAGHGAFRGYQDTRTPLYVSLALNAVNAALDPLLIFGLGWGLTGAATATAGAQWTGALGFLWLLLVRQREAKGLVLAWPR----WRALLPFMKTGWTLAARTLALTGTMALATAVAARVGTAEVAAHQVAAQFWSLLALVVDALAVAAQALVARYLGEEKPREARAVANRLLVMGLAVGALLGLGFWGMQPFLPALFTDDPATARLVEKVFPFVALMQPLNALVFVGDGVFLGVEDFGFLAKAMAASAAGAAVVLLLVMPMGWG---LAGVWWGLVALMALRAVTLGVRY 463 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig87.17792.1 >prot_Ecto-sp6_S_contig87.17792.1 ID=prot_Ecto-sp6_S_contig87.17792.1|Name=mRNA_Ecto-sp6_S_contig87.17792.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=635bp MQAVPESFLRRSTLGATRGFGLRLALLLLLLQQQLAEAVVPPRQHSSSCGback to top mRNA from alignment at Ecto-sp6_S_contig87:154757..169432- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig87.17792.1 ID=mRNA_Ecto-sp6_S_contig87.17792.1|Name=mRNA_Ecto-sp6_S_contig87.17792.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14676bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:154757..169432- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig87:154757..169432- >mRNA_Ecto-sp6_S_contig87.17792.1 ID=mRNA_Ecto-sp6_S_contig87.17792.1|Name=mRNA_Ecto-sp6_S_contig87.17792.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1905bp|location=Sequence derived from alignment at Ecto-sp6_S_contig87:154757..169432- (Ectocarpus species6 EcLAC_371)back to top |