mRNA_Ecto-sp6_S_contig86.17750.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI) HSP 1 Score: 1288 bits (3333), Expect = 0.000e+0 Identity = 708/740 (95.68%), Postives = 710/740 (95.95%), Query Frame = 1
Query: 1 MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYFSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGVSPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVRGDGHNTRFEPQEGGEDARRGTAEVETRFLGVGDREQRGELLSEGAXXXXXXXXXXXXXXX----EHVGWRQHHLQGDAADIESAGRGRAFPRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPKPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEGQR 2208
MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSA+AKRKEDARE XXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAM DILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAA AGGENSS GLQLLASSARGMLSSSQAGAGIMEDI GFAS GGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEI RPTPARVDTVIACSM VAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLT ARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAY SLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGG SPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGV GDGHNTRFE QEGGEDARRGTAEVETRFLGV DREQRGELLSEGA XXXXXXX EHVGWRQHHLQGDAADIESAGRGR FPRTVCSAGQAA EGEGETAFWTSPEG RHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHP+PHPKRSLATLQLAVGLLIIPVALTFIALGHSAEGQR
Sbjct: 1 MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMDDILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEDIAGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMAVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTAARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGEDARRGTAEVETRFLGVEDREQRGELLSEGAAXXXXXXXDEEAGVGRGGGEHVGWRQHHLQGDAADIESAGRGRTFPRTVCSAGQAAVEGEGETAFWTSPEGLRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEGQR 740
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.280e-62 Identity = 147/399 (36.84%), Postives = 198/399 (49.62%), Query Frame = 1
Query: 76 MFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 1272
MFAC L NTLLGVS+VG A GF AG+ +GT ++FA + GL+LLA S+ V A PSS+ VA P++ ID AVA+KCFGVATSYL+VIGDL+P A+ +L + L RH W+T + APLA R+LGALKYTATLAIG FL MV+++ +P L GG+ D +C +G+ +L+ L IFVF +TCHQNIF +CNE+ PT R+ VIA ++ A A+++SI+W A+ATFG V ++L Y + LT AR+CV++LV++ YPLQAHPSR I++
Sbjct: 18 MFACAAALINTLLGVSIVGSAHGFTEAGYALGTALFVIFAGFSAMGLYLLACSARKVGAF---------------------------PSSYYVVAHAAVPQYTLAIDAAVAIKCFGVATSYLIVIGDLLPDAVEGLL-KERAAPALLSRHFWITTAMVWIAPLAAQRSLGALKYTATLAIGFAFFLVSMVVAYAAVPSLHRS-------------------------------------------------------------LCHGGEVD---------TCSGAGPAVGAPVHVLRVLSIFVFSYTCHQNIFGVCNELREPTQGRIKAVIAVAVATAAAVHLSISWSAFATFGTNVSDNILNNYAKGLPLTVARVCVALLVSTGYPLQAHPSRRSIVT 318
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.540e-53 Identity = 186/704 (26.42%), Postives = 256/704 (36.36%), Query Frame = 1
Query: 88 VTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAP--RWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYFSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGVSPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVRGDGHNTRFEPQEGGEDARRGTAEVETRFLGVGDREQRGELLSEGAXXXXXXXXXXXXXXXEHVGWRQHHLQGDAADIESAGRGRAFPRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPKPHPKRSLATLQLAVGLLIIPVALTFIALGHS 2193
VT L+NT+LG ++ + A G+++GT L +F + GLHLLA ++ + RE SSFR V + P +W+ +ID VA KCFGVATSYL+VIGD++P + + RH+W+ IG L+ APL F RTL L++T+ L++ V F+ M+++F V+P LDAC G DG C + + L +FVF FTCHQNIF I NE+ PTP RVD VI S+VVA +Y+++ W Y TFG V+ D+L + + +++ AR+ V++LV YPLQ HPSR CI+S + AY PS R H S+V +LGV T FL LS TIA+AV LG +L +VGATGSTTV+++LPG+ Y K+ P+PH KR LA QL GL I+P ALT IA+ +S
Sbjct: 12 VTNLANTILGAGMLAIPFAVASCGYVLGTICLFLFGAASAFGLHLLATCALKLG---------RE-------------------SSFRGVTQIALPGEKWSMMIDGVVAFKCFGVATSYLIVIGDVVPEVLYGLSS---------SRHLWIFIGALVIAPLCFLRTLDKLRFTSALSLVFVAFITSMILAFAVVPSLDAC------------------------------------------------------------------------GSNDGDDCQGDIYAARTGVSAASQLTVFVFGFTCHQNIFAIANEMKLPTPRRVDRVIVSSIVVAFFVYLAVGWAGYMTFGDNVESDVLVNFGGSPVVSAARLFVALLVCFSYPLQCHPSRACIISI-------IHSAY---------------------PSSRDHE--------------SLV-------------------------------------------------------------------------------YLGV---------------------------------------------------------------------------------------TGTFLVLSLTIALAVTKLGTVLAIVGATGSTTVSYILPGICYFKMFPEPHLKRWLALGQLCAGLFIMPAALTLIAIENS 398
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A8J5XBN8_DIALT (Aa_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBN8_DIALT) HSP 1 Score: 204 bits (519), Expect = 1.790e-52 Identity = 230/715 (32.17%), Postives = 307/715 (42.94%), Query Frame = 1
Query: 70 ATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTG-LLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYFSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGVSPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVRGDGHNTRFEPQEGGEDARRGTAEVETRFLGVGDREQRGELLSEGAXXXXXXXXXXXXXXXEHVGWRQHHLQG-------DAADIESAGRGRAFPRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPKPHPKRSLATLQLAVGLLIIPVALTFIALGH 2190
A++ + V L NT++G ++G+ AR G L+G L+ LHLLARS+ T + P+SF +VA PRWAF+IDLAVA+KCFGVATSYL+V GD++P A + R HP R +WV + +AAPLA + L +KYT+ LAI VV+LA + ++ L P L AC A A G AS RG + L L+ L IFVF FTC QN+F++ NE+ +PT AR+D V+ S+++A+A+Y+ + G Y T+G V D+L +YP +T AR ++++V YPLQAHPSR C L+ + S G G A ++ +A P A L VAD TAA+ DG V + G R A R E G ARR L +G EQR + + XXXXXXXXXXXXXXX I +G G FP + G + TAAFLA S IA+AV+DLGV++ VVGATGST V+++LPG +Y LHP PH R A A G+ I PV+L I H
Sbjct: 17 ASLLSSVANLCNTIVGAGILGLPYALARCGLLLGVGLLLGCXXXXXLSLHLLARSAHTTG---------------------------VRPASFYSVANAAIPRWAFVIDLAVAVKCFGVATSYLIVAGDMLPLVCAHL--RLHP--AFSSRELWVVLASTVAAPLACASRLDVMKYTSALAIACVVYLAVLALATLAWPSL-AC----------------------AHARG----------ASDCRGPVR----------------------------------------LRPDDGALRVLSIFVFGFTCQQNVFSVVNELRKPTLARIDLVVGASVLLALALYLPVGVGGYLTYGSHVAPDVLLSYPPDSPWVTAARAALAVVVVLSYPLQAHPSRRCFLTLLR-----------SARRGGGGGVRALGALGALD------IDAEAVPVATL------VADAHTAAA-------DGDVGAPTLAGATCARDRAAHAVAXXXXXXXXXXXXXXXXXXERIERPADGRCARR---------LLIGSDEQRSDAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLQPIVLSGLG--FPES----------------------GGAYSAYTAAFLAGSLLIALAVDDLGVVMAVVGATGSTAVSYILPGAIYWVLHPHPHAMRFAAGAMFAAGVCITPVSLAAILTSH 564
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: F0XYI5_AURAN (Uncharacterized protein AOT5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI5_AURAN) HSP 1 Score: 196 bits (499), Expect = 4.440e-51 Identity = 141/403 (34.99%), Postives = 196/403 (48.64%), Query Frame = 1
Query: 64 RTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 1272
R A+ +CV L+NT++G ++G+ F+ AG L+G +L++FA + GLHLLA ++ VSA A GG PSSFR+VA APR+A LID AVA+KCFGVATSYL+V+GD MP MA + G + +R W+ LL APL + L LK+ + L++G V+FL M++ + +E GGG D G+ S + + T +T+ IF+F +TCHQNIF + NEI RPTPAR+D V+A S+ A IY+ +A Y TFG V GD+L YP +T AR+ V+ LV +PLQ HPSR C++S
Sbjct: 27 RVASFLSCVFNLTNTIVGSGMLGLPAAFSNAGSLLGCAFLVLFASTSAFGLHLLAAAARIVSAKA-------------------GGDA---PSSFRSVATAAAPRFAVLIDGAVAVKCFGVATSYLIVVGDTMPVVMAKLGGFA------ANRSPWIVGAALLVAPLCYMPRLDGLKFASALSLGFVMFLTVMIVEY--------------------------------------------------------------YLE--------------GGGGGDVGTT---SLAVFDLDTA-KTMTIFIFGYTCHQNIFAVVNEIKRPTPARLDAVVATSIGTACGIYLLVAVCGYMTFGDKVQGDILDNYPVEPAITVARVFVAALVALSFPLQCHPSRACVMS 321
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: W7U3M9_9STRA (Amino acid transporter, transmembrane n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3M9_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.000e-49 Identity = 136/411 (33.09%), Postives = 207/411 (50.36%), Query Frame = 1
Query: 70 ATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTV---SAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHP-----DSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW 1278
A M++CV L+N ++G ++G+ A++GWL+G L++ A L+G G LL RS+ T+ S +R P+SF + V PR L+D VA+KCFGVA SYLV++GDL+P + + R HP V +R VWVT+ FLL APL+F+ L AL++T+ +++G+V+ L +V L+ C P A+ VAA T G AR + + ++ P C + G+ ILQ LPIFV+ +T HQN +CNE+A PTP R I + +++ +Y+++A+ AY T+G + DLL ++P + L T+ R +S+LVT YPLQAHP+R C+L+ W
Sbjct: 137 AAMWSCVAVLANNMMGAGILGLPYAVAQSGWLVGGSLLLLSAVLSGHGFDLLTRSARTIHQRSLSGPHVPPSRPR-----------------PASFYTLCQVCMPRGTVLVDATVAVKCFGVAISYLVIVGDLLPDVVKE--ARQHPLGGPPADVWEERWVWVTLAFLLVAPLSFASHLSALRFTSGISVGIVLVLT-LVALLYAGQVLNPCQGTSFGVTRQPTPPPAMASVAA-TLGAVYP----------ARSPHNRPRPSRPVLALAP-------------------PCRGPVKIAGTGPAILQVLPIFVYSYTAHQNFGLLCNELANPTPRRTRQTIMAATGLSLGVYLTLAFAAYLTYGAALQRDLLLSFPASLLSTSLRAALSVLVTFTYPLQAHPARTCLLALW 497
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A6S8D239_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D239_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.020e-44 Identity = 130/422 (30.81%), Postives = 196/422 (46.45%), Query Frame = 1
Query: 64 RTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTIL-----QTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW-KAFSLDMQEAY 1311
R A++ +C+ L+NT++G ++G+ F AG ++G L++FA L+G GL+LLA S+ + R +DA SFRAVA + +PR++ LID AVA+KCFGVATSYL+V+GD +P + R+ W+ + + +PL L LK+T+ L++ V +L GM++++ F + G C G N + S QT++ +T+ IFVF FTCHQNIF++ EI RPT R+ VI S+ +A ++Y+++AW Y TFG V GD+L Y + + AR+ V+ LV YPLQ HPSR C LS + FS + E+Y
Sbjct: 22 RVASIASCILNLTNTIVGSGMLGLPKAFENAGAVMGCILLIIFASLSGFGLYLLASSAR----LCNRVDDA----------------------SFRAVAEIASPRFSALIDAAVAIKCFGVATSYLIVVGDAVPRVIGTF-----------SRNFWIILSTIFISPLCLLDKLDGLKFTSALSLLFVAYLTGMIITYR---------------------------------------------------------------------------FSY-------GHC--GENCMPSNQTLINLRLAKTMTIFVFGFTCHQNIFSVVTEIKRPTSQRISFVIFFSLFIACSVYIAVAWSGYHTFGKKVQGDILDNYNASPAVDVARLFVAALVAFSYPLQCHPSRNCFLSLLDQCFSSNSIESY 322
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A7S1TS32_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS32_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.300e-44 Identity = 149/486 (30.66%), Postives = 214/486 (44.03%), Query Frame = 1
Query: 25 VSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKR---KEDAREXXXXXXXXXXKGGTRC---------------------------------IPP--SSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFG-----VGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYFSLATDDGAGTEKD 1353
+S G +GGA+ + +CV TL+NT+LG ++ ++ F+ G ++G L FAC A LHLLA S+ TV+ V + D+ G TR + P SSF VA PR++FL+D AVA+KCFGVA SYL+V+GD+MP AM ILG P L R W+ G+LL P+AF++TL ALK+T++ A+ +V+ + M + + V P LD C + PG V ++ D P + L +FVFCFTCHQNIFTICNEI R T V+ VI ++ + ++ + +A Y+ +G G D ++L P T ARI ++++V YPLQAHPSR LS + + F + TD AG + D
Sbjct: 37 LSAGKAAIGGAS-----ILSCVATLANTILGTGILELSHAFSATGLVVGVVLLCFFACCAAFTLHLLAESARTVTGVDPNTGARLDSSFSLDHTAAFVPPGSTRSQDLLYRSSGASSPVYSDQDRLTLADPSQPLPDELKPQKSSFYLVADAAVPRFSFLVDTAVAVKCFGVAVSYLIVVGDMMPDAMKFILGDDGPPFWL-SRQTWIVAGWLLVVPMAFAKTLDALKFTSSFAVAVVMGVVAMTILYAVDPDLDGCDDADDDGC----PGETV------------------------------------VIPDSP-------------------------------KDTFAVLTLFVFCFTCHQNIFTICNEIKRNTRKNVNRVIFIAVSMCFSLCLLVAIAGYSMYGDVLLPEGKD-NILPHMPSNEATTAARIGLTLMVLFSYPLQAHPSRNSALS--------LVNSCFGIETDAAAGPQVD 436
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A7S2X719_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X719_9EUKA) HSP 1 Score: 174 bits (442), Expect = 1.580e-43 Identity = 128/401 (31.92%), Postives = 196/401 (48.88%), Query Frame = 1
Query: 58 APRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTI-GFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSR 1257
AP A++ +C+ L+NT+LG ++G+ FA +GW++G L FACL+G GLHLLA S+ +R + R+ ++F VA R A +ID+AVA+KCFGVATSYL+V+GDL+P A+ +G S + +R + +T+ + APL F + L AL++T+ L+IG+++F+ +++ + V P L+ + S G + +N + + T L+ L IF+F +TCHQNIF++CNE+ T RV+TVI S+ A +YM IA YATFG + D L+ YP L+TT R+ +S+LV +PLQA P R
Sbjct: 32 APGQASLMSCIVNLANTILGAGILGLPHAFASSGWVLGVILLCFFACLSGFGLHLLATISV------ERFSENRD-------------------ATFYKVASQAFERGALVIDVAVAIKCFGVATSYLIVVGDLLPVALKS-MGLS---GLATNRQLIITVLTGAVVAPLCFLKKLDALRFTSALSIGMLLFVTIVIIIYAVEPSLN--------------------------------------------NQIDSDDKG------------------------------DTANFVANEDT-LKILTIFIFGYTCHQNIFSVCNELQNLTHTRVNTVIGTSVGSAWVLYMIIAISGYATFGDKIAADALEDYPDAPLITTVRVFISLLVVLSFPLQAFPCR 328
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Match: A0A7S3YDB3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YDB3_9EUKA) HSP 1 Score: 172 bits (437), Expect = 1.020e-42 Identity = 131/401 (32.67%), Postives = 199/401 (49.63%), Query Frame = 1
Query: 58 APRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSAVAKRKEDAREXXXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTI-GFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAATAGGENSSGGLQLLASSARGMLSSSQAGAGIMEDIPGFASTGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIARPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSR 1257
AP AT+ +C+ L+NT+LG ++G+ FA +GW++G L FACL+G GLHLLA TVS +R + R+ ++F VA R A +ID+AVA+KCFGVATSYL+V+GDL+P A+ +G S + +R + +T+ ++ APL + L AL++T+ L+IG+++F+ +++ + + P SLN+ + S G + +N + + T L+ L IF+F +TCHQNIF++CNE+ T ARV+TVI S+ A +YM IA YATFG + D L+ YP L+TT R+ +S+LV +PLQ P R
Sbjct: 48 APGQATLMSCIVNLANTILGAGILGLPHAFASSGWVLGIILLCAFACLSGFGLHLLA----TVSV--ERFGETRD-------------------ATFYKVASQAFQRGALVIDVAVAIKCFGVATSYLIVVGDLLPVALKS-MGLS---GLATNRQLIITVLTVVVVAPLCALKKLDALRFTSALSIGMLLFVTIVIVIYALEP-------------SLND-------------------------------QIDSDDKG------------------------------KTTNFVANRDT-LKILTIFIFGYTCHQNIFSVCNELKDLTHARVNTVIGTSVGSAWVLYMIIAISGYATFGDKITADALEDYPDAPLITTVRVFISLLVVLSFPLQCFPCR 344 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17750.1 >prot_Ecto-sp6_S_contig86.17750.1 ID=prot_Ecto-sp6_S_contig86.17750.1|Name=mRNA_Ecto-sp6_S_contig86.17750.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=737bp MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFAback to top mRNA from alignment at Ecto-sp6_S_contig86:432675..442344- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17750.1 ID=mRNA_Ecto-sp6_S_contig86.17750.1|Name=mRNA_Ecto-sp6_S_contig86.17750.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9670bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:432675..442344- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:432675..442344- >mRNA_Ecto-sp6_S_contig86.17750.1 ID=mRNA_Ecto-sp6_S_contig86.17750.1|Name=mRNA_Ecto-sp6_S_contig86.17750.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2211bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:432675..442344- (Ectocarpus species6 EcLAC_371)back to top |