mRNA_Ecto-sp6_S_contig86.17749.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: D7G1F6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F6_ECTSI) HSP 1 Score: 1003 bits (2592), Expect = 0.000e+0 Identity = 574/617 (93.03%), Postives = 579/617 (93.84%), Query Frame = 1
Query: 1 QQAFEDMRVVELKVELKARGLPVSGLKAVLIQRLHDHDSSLVEKLAQAKDEEPTAAVKSSDGAGAELSPATVTTALPTVADVGKQVESSTPTKDAVGAGAAAIPATGENSKEISPKKQXXXXXXXXXXXXXNPDAAVAPQVLDAPAAEPRSTRSKTRRASMANTAPAPAASAETTPTKPEVTVKSTAAAPVIVKPEXXXXAAEGGGGSGAEVVDSNSETQIRLAKTAGVFGVVVGAACIGSGHGLTAGNLATLHVALLGLFIAATASNKRPTGSRAFAARAIVTLALALVASEALQQTQRQXXXXXXXXXXXXXXX-MATLSALVSDRVAASLSCGTEGGGGVSCGQVGKTVLPTLQACLHWVKGLWSVLEEGEWRSVRFGVIEFWGWASVAGYLALVEALPVMLQPLHGVFRRLERGHNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKAHPK 1848
QQAFEDMRVVELKVELKARGLPVSGLKAVLIQRLHDHD+SLVEKLAQAKDEEPTAAVKSSDGAGAELSP TVT ALPTVADVGKQVESSTPTKDAVGA AAAIPATGENS+EISPKKQXXXXXXXXXXXXXNPDAAVAPQVLDAPA EPRSTRSKTRRASMANTAPA EVTVKSTAAAPVIVKPE XX AEVVDSNSETQIRLAKTAGVFGVVV AACIG GHGLTAGNLATLHVALLGLFIAATASN RPTGSRAFAA+AIVTLALALVASEALQQTQR XXXXXXXXXXXXXXX MATLSALVSDRVAA LSCGTEGGGGVSCGQVG+ VLPTLQACLHW+KGLWSVLEEGEWRSVRFGVIEFWGWASVAGYLALVEALPVMLQPLHGVFRRLERGHNILLALTSAAML GIIRSCVTSGKTSSVHAMLCG FDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKA K
Sbjct: 3 QQAFEDMRVVELKVELKARGLPVSGLKAVLIQRLHDHDNSLVEKLAQAKDEEPTAAVKSSDGAGAELSPETVTKALPTVADVGKQVESSTPTKDAVGAAAAAIPATGENSEEISPKKQXXXXXXXXXXXXXNPDAAVAPQVLDAPATEPRSTRSKTRRASMANTAPAXXXXXXXXXXXXEVTVKSTAAAPVIVKPEAPXXXXXXXXXXXAEVVDSNSETQIRLAKTAGVFGVVVSAACIGWGHGLTAGNLATLHVALLGLFIAATASNNRPTGSRAFAAKAIVTLALALVASEALQQTQRXXXXXXXXXXXXXXXXXMATLSALVSDRVAAILSCGTEGGGGVSCGQVGEGVLPTLQACLHWMKGLWSVLEEGEWRSVRFGVIEFWGWASVAGYLALVEALPVMLQPLHGVFRRLERGHNILLALTSAAMLVGIIRSCVTSGKTSSVHAMLCGAFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKAQIK 619
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A835ZBR2_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR2_9STRA) HSP 1 Score: 239 bits (611), Expect = 7.120e-64 Identity = 139/276 (50.36%), Postives = 164/276 (59.42%), Query Frame = 1
Query: 1132 RFGV--------IEFWGWASVAGYLALVEALPVMLQP---------------------LHGVFRRLERGHNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQ---SRTGTE------CHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKAHP 1845
RFGV ++ G SV GYLA VE + L P + RLE HN+ LA SA ML GI+RSC SGK S+HA+LC PF +ED VF TA FFWSK WEW DTA+LVAKGKPV+WL YTHHASTA+LT LNM P NAMWS+VCA NSFVHAWMY YY P SLLR + +T Q++QH VLASA YV+ + R G + C N+ PI AGLGLYLMY +FF FY +TY ++ P
Sbjct: 680 RFGVDPFAPLTAVQIAGMTSVLGYLAFVEVALLFLAPPTAPADEPGSTPEEATAKGGTMRKAVLRLENAHNMGLAALSAGMLVGIVRSCFVSGKVESLHALLCQPF-QEDTVFLWTAHLFFWSKFWEWGDTALLVAKGKPVTWLHYTHHASTAVLTMLNMSPIYNAMWSIVCATNSFVHAWMYGYYWKP--SLLRPLRRAITRIQILQHAGVLASALYVLRELLRPRQGDDKAMEAGCANSLVPIAAGLGLYLMYFLFFLAFYIQTYAKKQRRGRP 952
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A7S3H2Y1_9STRA (Elongation of fatty acids protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2Y1_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.250e-29 Identity = 68/155 (43.87%), Postives = 89/155 (57.42%), Query Frame = 1
Query: 1159 WASVAGYLALVE----ALPVMLQPLHGVFRRLERGHNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFP 1611
WAS Y+ VE LP + +F L HN+ LA+ S ML GI+ SGK +S+HA LC PF + + + + F+ SK WEWVDTA L+ K VSWLQYTHH STAIL N+ P ++ + C N+FVH +MY Y+AFP
Sbjct: 21 WASPVLYMVYVEIAKRVLPYESKENKHIFHVLRLVHNVGLAIASLVMLIGILAVSHQSGKLNSIHAALCDPFLDVESA-TLVGRYFYLSKYWEWVDTAFLITARKDVSWLQYTHHMSTAILVFANLTPVISSASLLACFTNTFVHVFMYFYFAFP 174
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A6C0EJX8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EJX8_9ZZZZ) HSP 1 Score: 124 bits (311), Expect = 1.440e-28 Identity = 72/190 (37.89%), Postives = 108/190 (56.84%), Query Frame = 1
Query: 1252 HNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYL 1821
HNI+L + S ML GI + + K ++++ +LC P++ + ++ F +SK EW DT L GK +S LQYTHH +TA L NMV + V +LN FVH WMY Y+A+PR L++ KV +T AQ+VQH++ L + Y + C N G LY+MYL++F++FY + Y+
Sbjct: 38 HNIILCILSFIMLIGITVANYQTYKFNTLNNLLCVPYNN-NIYATISVTLFLYSKYIEWGDTVYLHLSGKSISQLQYTHHMTTAFLVYCNMVDYISPGIYVCMSLNCFVHIWMYWYFAYPR-GYLKKYKVLITQAQIVQHIVCLVAIIYTSFLD----NCEQNKYGNSVGFLLYMMYLLYFSMFYFKNYI 221
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A6P8MT59_9HYME (Elongation of very long chain fatty acids protein n=2 Tax=Pyrobombus TaxID=144703 RepID=A0A6P8MT59_9HYME) HSP 1 Score: 89.0 bits (219), Expect = 1.080e-16 Identity = 57/159 (35.85%), Postives = 89/159 (55.97%), Query Frame = 1
Query: 1369 EDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVP-TRNAMWSVVCALNSFVHAWMYAYYAFP--RFSLLRRTKVWLTW---AQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGG 1827
+DPVF + TF SK E+ DTA +V + +P+ +L + HH + + T + T N W + +NSFVHAWMY+YYA RF++ + +++T +QMV I+ ASA Y V+ ++ ECH I + +YL Y + FA F+++ YL
Sbjct: 18 QDPVFGFWSWTFALSKLVEFGDTAFIVLRKQPLIFLHWYHHVTVLLYTWFSYAEATGNGKWFGL--VNSFVHAWMYSYYALKAMRFNIPKWVAMFVTTLQLSQMVVGCILTASAYYYVHSAQV--ECHVTPLNIKLAMLMYLSYFILFARFFQQAYLSN 172
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A6J3L2Y8_9HYME (Elongation of very long chain fatty acids protein n=13 Tax=Pyrobombus TaxID=144703 RepID=A0A6J3L2Y8_9HYME) HSP 1 Score: 90.1 bits (222), Expect = 1.630e-16 Identity = 62/178 (34.83%), Postives = 97/178 (54.49%), Query Frame = 1
Query: 1312 VTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVP-TRNAMWSVVCALNSFVHAWMYAYYAFP--RFSLLRRTKVWLTW---AQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGG 1827
VTS T+ + +L + DPVF + TF SK E+ DTA +V + +P+ +L + HH + + T + T N W + +NSFVHAWMY+YYA RF++ + +++T +QMV I+ ASA Y V+ ++ ECH I + +YL Y + FA F+++ YL
Sbjct: 59 VTSHGTAKCNYILSSHLTQ-DPVFGFWSWTFALSKLVEFGDTAFIVLRKQPLIFLHWYHHVTVLLYTWFSYAEATGNGKWFGL--VNSFVHAWMYSYYALKAMRFNIPKWVAMFVTTLQLSQMVVGCILTASAYYYVHSAQV--ECHVTPLNIKLAMLMYLSYFILFARFFQQAYLSN 231
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A6P3DII0_BOMTE (Elongation of very long chain fatty acids protein n=5 Tax=Bombus TaxID=28641 RepID=A0A6P3DII0_BOMTE) HSP 1 Score: 89.0 bits (219), Expect = 8.020e-16 Identity = 57/159 (35.85%), Postives = 89/159 (55.97%), Query Frame = 1
Query: 1369 EDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVP-TRNAMWSVVCALNSFVHAWMYAYYAFP--RFSLLRRTKVWLTW---AQMVQHMIVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGG 1827
+DPVF + TF SK E+ DTA +V + +P+ +L + HH + + T + T N W + +NSFVHAWMY+YYA RF++ + +++T +QMV I+ ASA Y V+ ++ ECH I + +YL Y + FA F+++ YL
Sbjct: 113 QDPVFGFWSWTFALSKLVEFGDTAFIVLRKQPLIFLHWYHHVTVLLYTWFSYAEATGNGKWFGL--VNSFVHAWMYSYYALKAMRFNIPKWVAMFVTTLQLSQMVVGCILTASAYYYVHSAQV--ECHVTPLNIKLAMLMYLSYFILFARFFQQAYLSN 267
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A507C8Y6_9FUNG (Elongation of fatty acids protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C8Y6_9FUNG) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-14 Identity = 57/215 (26.51%), Postives = 109/215 (50.70%), Query Frame = 1
Query: 1252 HNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTG---------------TECHNNTTPILAGLGLYLM--YLVFFALFYRRTY--LGGAKKA 1839
HN+++++ SA + I+ + ++ +C + P ++ F K WE++DTA +V + +P+ +L HH++TA++ + +V ++++W + +N FVH MY Y+A S+ K +LT Q++Q ++ LA ++VY ++C++ + AG+ +++ YLV F FYRRTY GA K+
Sbjct: 72 HNLIMSVASAILFVLIMEPLIPMLYERGLNYSVCNK-EAYTPRLELLYYFNFLFKIWEFIDTAFIVLRKRPLEFLHVYHHSATALMAFMFVVKPQSSLWFYIL-INLFVHVLMYYYFAVTALSIKIWWKKYLTTMQIIQFVVDLALIGFLVYNVFAADLFPWIVTDYGFPVISDCYSADPHLHAGVASFVLFSYLVLFMDFYRRTYNKKDGASKS 284
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A0D1ZIC0_9EURO (Elongation of fatty acids protein n=1 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1ZIC0_9EURO) HSP 1 Score: 79.3 bits (194), Expect = 3.390e-12 Identity = 62/213 (29.11%), Postives = 91/213 (42.72%), Query Frame = 1
Query: 1252 HNILLALTSAAMLAGIIRSCVTSGKTSSVHAMLCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVW----LTWAQMVQHMIVLA----------SATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKAHPK 1848
HN+ L L S +LA I + + V +C M + +K E +DTA LV K KP+++L HH +TA+L ++ + W VV LN VH MY YY F R ++W +T Q++Q +I L ++TY + GT C AG+G+ YL+ F FY TY P+
Sbjct: 87 HNLYLTLISGGLLALFIEQLLPELVRNGVFHAICSYDGGWTKELQMLYYLNYLTKYLELIDTAFLVLKKKPLTFLHTYHHGATALLCYTQLLGHTSVSW-VVITLNLTVHVVMYWYY----FQAARGVRIWWKKYITMLQIIQFVIDLGFVYFASYTYFASTYFPWAPNVGT-CSGEEFAAFAGMGILSSYLLLFISFYFATYRKQTVSGRPR 293
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Match: A0A6P5HY12_BOMTE (Elongation of very long chain fatty acids protein n=1 Tax=Bombus terrestris TaxID=30195 RepID=A0A6P5HY12_BOMTE) HSP 1 Score: 78.2 bits (191), Expect = 3.740e-12 Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 1348 LCGPFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRN-AMWSVVCALNSFVHAWMYAYYAFP--RFSLLRRTKVWLTWAQMVQHM--IVLASATYVVYQSRTGTECHNNTTPILAGLGLYLMYLVFFALFYRRTYLGG 1827
+C + DPV F SK E+ DT +V + +P+ +L + HH + + + L + + W+ CA+N FVH+WMY+YYA RF+L R + +T Q +Q + +A+ TY Y +CH + I GL LY Y + F+ F+++ YL
Sbjct: 105 VCISYITYDPVMTFWTLMFIVSKIVEFGDTVFIVLRKQPLKFLHWYHHITVLLYSWLCFIENAPYSRWN--CAINYFVHSWMYSYYALKVMRFNLPRWFAMLITTLQTLQMVWGCFIATMTYN-YIRNDQIDCHVKSYNIKIGLLLYFSYFILFSRFFKQAYLSN 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17749.1 >prot_Ecto-sp6_S_contig86.17749.1 ID=prot_Ecto-sp6_S_contig86.17749.1|Name=mRNA_Ecto-sp6_S_contig86.17749.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=613bp MRVVELKVELKARGLPVSGLKAVLIQRLHDHDSSLVEKLAQAKDEEPTAAback to top mRNA from alignment at Ecto-sp6_S_contig86:422443..431389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17749.1 ID=mRNA_Ecto-sp6_S_contig86.17749.1|Name=mRNA_Ecto-sp6_S_contig86.17749.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8947bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:422443..431389+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:422443..431389+ >mRNA_Ecto-sp6_S_contig86.17749.1 ID=mRNA_Ecto-sp6_S_contig86.17749.1|Name=mRNA_Ecto-sp6_S_contig86.17749.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1839bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:422443..431389+ (Ectocarpus species6 EcLAC_371)back to top |