mRNA_Ecto-sp6_S_contig86.17739.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig86.17739.1
Unique NamemRNA_Ecto-sp6_S_contig86.17739.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 1.710e-190
Identity = 279/289 (96.54%), Postives = 282/289 (97.58%), Query Frame = 1
Query:    1 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            MVDISRH+DFLGPCGKTLSVSERSGLQVSMMQR+REERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK      FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKG LLVEASRKIRP+RNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct:    1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK------FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 3.620e-125
Identity = 184/194 (94.85%), Postives = 185/194 (95.36%), Query Frame = 1
Query:  286 MPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            MP+VKPEYEVLAAAVTGRLRGDPSLPLDEEPE       XXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKG LLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPS SCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct:    1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.470e-102
Identity = 159/291 (54.64%), Postives = 205/291 (70.45%), Query Frame = 1
Query:    1 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTG--RLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            MVDI +H++FLGP G +LS  ER+GLQVSM+QR++EE L   + FWGK+  +E DYL+CY+L  P LEEG FP+++      +Y+  S+DT LR MP +  E + LAAAV    R +GDPSLPLD EPE             P   ERF E+HRLA+ V  ID  VAV PKG +L+EASR++ P+R FEGLS EAA ++R+YFH R PE+  A AALT+KGLV DADFLDP+A D+P G W+L+ + + + + LRSLAWPGYFFF +  +G++GG YFG GLPNTDL FML
Sbjct:    1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQ------YYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAAP---ERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.580e-87
Identity = 141/277 (50.90%), Postives = 181/277 (65.34%), Query Frame = 1
Query:   43 GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLD--EEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            G TLS+ E+SGL ++++QR +EE    K+ FWGK+ G E DYLV YAL    +   D P KK      FY+C   D +LR +P +  EY  +A ++ GR +GDPS+PLD  EE E                 ERF E+HRL + V+ IDR VAVVP+G  L+EAS KI  +RN+EGLS EAA DLR+YFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+L+ + S +   LRS  WPGYFFFH+  T +YGG YFGDGL N DL FML
Sbjct:   14 GCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKK------FYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK-------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA)

HSP 1 Score: 229 bits (583), Expect = 9.520e-71
Identity = 130/290 (44.83%), Postives = 181/290 (62.41%), Query Frame = 1
Query:   31 LGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDT-SLRLMPAVKPEYEVLAAAVTGRL---RGDPSL-------PLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            LGP G TLS+ ER+ LQ++M+  +R+E L G++ FWGK+ G  NDYL+ YA+  PT     FP+KK      FY+C +S+  SL  MP++  E+E LA   T R+   RGDPS          DEE E              +  E F E HRL + V+TID   +V+P+G  +V+A+  +R +++FEGLS +AA  L +Y+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W+L  + S +  +LRS  WPGYFF+H  ET +YGG YFGDG+ N D+ FML
Sbjct:    9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKK------FYYCTASNGYSLVQMPSLTEEWEGLAK--TWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNK--EVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN)

HSP 1 Score: 214 bits (545), Expect = 4.350e-65
Identity = 122/288 (42.36%), Postives = 168/288 (58.33%), Query Frame = 1
Query:   22 LDFLGPCGKTLSVSERSGLQVSMMQREREERLE-GKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGR-LRGDPSLPLDEEP----EXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            ++FL P G  LS+SER+GL ++M+Q  + E L  G + FWG+++G  +DYLV  AL TP+     FP KK      +Y   +    +  MP +  EY   AA +  +   G+PS+P    P    E                PE F E H+LA+ V  ID    VVP+G  LV+A+ ++  +  +EGL+ EAA  LRSYFHFR P+S  A  AL K G+VR  DFLDPIA D P G ++L  +PS + +++RS  WPG +F+H+  TG+YG  Y GDGLPNTD+QFML
Sbjct:    1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKF-----YYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO)

HSP 1 Score: 207 bits (528), Expect = 1.780e-62
Identity = 128/291 (43.99%), Postives = 175/291 (60.14%), Query Frame = 1
Query:   16 RHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPL---DEEPEXXXXXXXXXXXXX--PRPPER--FLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            RHLD L   G TLSV ER+GL+  M +R+ EE L   + FWG++   E DYLV Y    P+ E   +P K+      FYFC +    L+  P +  E+      +TG LRGDP L +   DEE  XXXXXXXXXXX    PR P++  F+E HRLAH V  +D  +++VP+G  ++  +  + P+ +F GLS   A    SY HFR P + E  + L ++G +RD DFLDP++ D+P G W++ ++     +++RSL WPGYFF H   T  +GGAYFG+GLPN DL FML
Sbjct:    4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQ------FYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC)

HSP 1 Score: 197 bits (502), Expect = 8.680e-59
Identity = 118/284 (41.55%), Postives = 162/284 (57.04%), Query Frame = 1
Query:   19 HLDFLGPC-GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            H+D L  C G TL+  ERS L++  ++R+  E + G M  WGK+ G   DY+VC A     +E  D P KK      FYFC ++   L+  P V  E    AAA TGRL+GDPS P+DE  +                 + F E+ RL  IV+ ID A ++VP G  +V A+  +  +R F+GL+ + A+ L SY+H+R  +S E  +AL++ GLVR ADFLDPI++D   G W +  + + +  VLR L +PG  FFH+  TG YG AY GDGL N DL FML
Sbjct:    5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKK------FYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK----------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A1V9YG94_9STRA (Radial spoke protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG94_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.380e-57
Identity = 120/284 (42.25%), Postives = 157/284 (55.28%), Query Frame = 1
Query:   19 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            HLD +    G TL+  ERS L+VS  +R   E +   M FWGK+ G+  DY+VC A     +E  D P KK      FYFC ++   L+  P V  E   +A   TGRL+GDPS P+DE  +                 + F E+ RL  IV+ ID A ++VP G  +V A+ +I  +R F+GLS + A  L SY+HFR  ES+E    L + GL+R ADFLDPI  D   G W L  + + +  VLR+L +PG   FH+  TG YG AYFGDGL N DL FML
Sbjct:    5 HLDIVSRSIGCTLTSQERSNLEVSFTRRYATEGIVS-MRFWGKIVGDAQDYVVCVAF----IEALDAPKKK------FYFCTNTSPELQQFPEVGKEKRDMAIKYTGRLKGDPSRPMDENEDPQDDNNK----------DIFREVDRLVLIVEAIDAAASIVPCGAYVVSATHQIVANRLFQGLSWDRALQLGSYYHFRPAESVERKGVLAQPGLIRPADFLDPITIDLD-GVWDLRQDNTGAAVVLRNLQYPGSVGFHKPRTGAYGFAYFGDGLKNPDLAFML 266          
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A485LRP6_9STRA (Aste57867_23175 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRP6_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.020e-57
Identity = 118/287 (41.11%), Postives = 158/287 (55.05%), Query Frame = 1
Query:   19 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
            HLD +    G T++  ERS L+V  ++R   E ++  M FWG++ G   DY +C A     +E  D P KK      F+FC ++   L+  P V  +    AA  TGRL+GDPS  +DE   EP+                 + F E+ RL  IV+ ID   +VVP G  +V A+ +I P+R F+GL  E A  L SY HFR   + E  +A+   GLVR ADFLDP+  D   G WTL  +P+ S  VLR+L +PG+ FFH+  TG +G AYFGDGL N DL FML
Sbjct:    5 HLDIVSRSIGHTVTSQERSNLEVGFIKRNATENIDS-MRFWGRIFGEAQDYTICVAF----VEGVDAPKKK------FFFCTNTSPDLQQFPEVGKDKRDKAARFTGRLKGDPSRLMDENETEPQEGETK------------DVFREVDRLVLIVEAIDYQASVVPCGAYVVSATHQIVPNRLFQGLPWEKALQLGSYHHFREATTAERKSAIATPGLVRPADFLDPLTVDLD-GTWTLRKDPTGSAVVLRNLVFPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G3_ECTSI1.710e-19096.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZL4_9PHAE3.620e-12594.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YS21_9STRA1.470e-10254.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1U7_9STRA1.580e-8750.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H666_9STRA9.520e-7144.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YNP7_AURAN4.350e-6542.36Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5A8CDT7_CAFRO1.780e-6243.99Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A067CFY2_SAPPC8.680e-5941.55Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YG94_9STRA1.380e-5742.25Radial spoke protein n=1 Tax=Achlya hypogyna TaxID... [more]
A0A485LRP6_9STRA4.020e-5741.11Aste57867_23175 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:331706..337355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score535.8
Seed ortholog evalue1.2e-149
Seed eggNOG ortholog2880.D7G1G3
Preferred nameRSPH9
Model size870
KEGG koko:K19757
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032421,GO:0032838,GO:0035082,GO:0040011,GO:0042995,GO:0043005,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060091,GO:0060271,GO:0060285,GO:0060294,GO:0070925,GO:0071840,GO:0097014,GO:0097458,GO:0097729,GO:0097730,GO:0097732,GO:0098862,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons7
EggNOG free text desc.cilium movement involved in cell motility
EggNOG OGs2C9RZ@1,2QR99@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_000910.1
Cds size870
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17739.1prot_Ecto-sp6_S_contig86.17739.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig86 331706..337355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350489.4269543-CDS-Ecto-sp6_S_contig86:331705..3317861682350489.4269543-CDS-Ecto-sp6_S_contig86:331705..331786Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 331706..331786 +
1682350489.440832-CDS-Ecto-sp6_S_contig86:333888..3340531682350489.440832-CDS-Ecto-sp6_S_contig86:333888..334053Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 333889..334053 +
1682350489.4503345-CDS-Ecto-sp6_S_contig86:334859..3350301682350489.4503345-CDS-Ecto-sp6_S_contig86:334859..335030Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 334860..335030 +
1682350489.4596536-CDS-Ecto-sp6_S_contig86:336024..3361321682350489.4596536-CDS-Ecto-sp6_S_contig86:336024..336132Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 336025..336132 +
1682350489.4694293-CDS-Ecto-sp6_S_contig86:336377..3364821682350489.4694293-CDS-Ecto-sp6_S_contig86:336377..336482Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 336378..336482 +
1682350489.479046-CDS-Ecto-sp6_S_contig86:336681..3368461682350489.479046-CDS-Ecto-sp6_S_contig86:336681..336846Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 336682..336846 +
1682350489.4886744-CDS-Ecto-sp6_S_contig86:337280..3373551682350489.4886744-CDS-Ecto-sp6_S_contig86:337280..337355Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 337281..337355 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig86.17739.1

>prot_Ecto-sp6_S_contig86.17739.1 ID=prot_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=290bp
MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVE
GNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVK
PEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPPAGEDEEEEPRPPERFLEM
HRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSY
FHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCS
VLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML*
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mRNA from alignment at Ecto-sp6_S_contig86:331706..337355+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig86.17739.1 ID=mRNA_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5650bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:331706..337355+ (Ectocarpus species6 EcLAC_371)
ATGGTGGATATTTCTCGGCACTTAGACTTCCTCGGACCTTGTGGAAAGAC ACTCAGCGTCTCCGAGAGGTCAGGATTGCAGGTGAGACGTTGATGTAGGC GCGGGCTGCGGGTAACCCGAGCGCAAAGCCGCCGTTAGTCTTGTGTGGGG GTCGCGCCAAAACACTCGATCGAAACTTCGTAGAAAAACTAGCAGGTTCT TGAGTCGAATGGCCTGGATTCTTGTCCCTCTAGTAGAGGTCTCCCAAAAC GGTAATAAAAAATTGTAGGAATGATTACTTTCAGTCCGAACGCCTGAACC TCGCACATTTAAGAGCCGAACGCCCGAGACGCGAGAAATCGCCTCATCGG CCTTCCTGCACTACGTGAGAAGCCCCCCGCAGGTTTTAGCTTGATTGGTG CCTTCTGCGTTGACGGTTGGCTATGTCGGTGACCGGCACTCTCAAGTACG AAAACGAGCATGCAGCAGGTGCTGCCAACACCAAATTACTCCGATCTCGC TAAATTTGTGCCTAAAGGTTACCTATCCTCCACCAAATTGGAGCCCCGTC CAATCTACAGGTTGTTTGACAAGTTCTTCGACGCTGAAATAGCTGTGTGC CTACCAATTTTGCTTGCCAACGAGAGGTTCGGGCCACACCGCGGCAACCT CCCGACGAAGAAGTATGTTCCCTGCTAAACGACGGTTTCAAATTATCTTA CGCGCGCGCGCAAAATGTTGCGCAACAAATACGTCCCCAATCCATTGTAG TTTCTCCTGATCTCGACACGTGTGCCCTGCGATAGACTATTCGCCGCGTT TCTAGGGAAAAATATTTTTTCTTGCACATACGCGGGCGCATAGAGGGATG GAAGTAGCGATTTGTCCAGGCGTGCTTGTGTATCTCTCTTCCAGAACAAT CTTGCATTCTGGATACGTGCGAAGACATGGTATATACACGCGATCCCTCA GTCCAAAGCATGTGGGGGTCATCAAAGAAGCTGTTGTTCTCCATTTTCGC AACAACCCAATTCGCGTAGTTTAGCACGCACAACAGAAAATATAATCCTC GTCTGTTTGTTTCCTCTACATCAGGCTGAGTATTAGGCGTTGCCCATTTA TACTATACTTGCCGCTTCCTTCTTGCCCTAGCCGTCGTCGTAAGGATGCA AACATATTTATCACACCTCCTTCTTGCACAACTCTTCATCTCTTCACTGC TTACCTCAATAGAAACGAAAATCTCTTAGAGCACCAGCACGGTTTGCCGG AAGCAAGCTGCGATGCCGATGTCGAATGGCCTGGGTTGTAAAGGTCATCA GGTATCATTACAAGACATACACCTTCAATCGCATGGCACGGCCCCAACGT ATTTGGTCGCTCAAATTTCACGCACCGTTTGGTGACATTGCGATGGACAG TTTTGAAGCGATTTTGTTCGTGGGATGCTCGTCAAGTGAGCTGCTGTTGC GGTATTTTCGGCCTGTCGATGATGTTCCCCACATTGAAGCAGAAACAAAT CCAAACCTTCTCGATGTCGACGCGTGCTTACAGAACGTCCTCCGGCATTG CCCCCGATTGAGACGATTGGGGACAGTCCCTCCAACTGTTATAGTGAATA CGAACCTCCTAACCTAGCCACCATACAACCAAATGCCTGCCCCTCGTATG GGGGAGAAGGGGGGGGGGGGAGGGGGTTACTCATAGTCGTGCATGCCATA CATTGACCTCGCATACCTACAACGCCGGGACGTAGCACGCCGGGTTCTCA CCGGACCAGGCTCTCACATCACCAAGCTCGAAGCACCGTGAGGTATTCGG CAAGTCGCATGAAGGGTGCGCTGCATCCTGCGAAGGGTCGGCATCTTGTG CTTATTTCCTTGCGTGCGGATGACAGCTGCGTATGACGTAATCAATTTTC TGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACTGTGTAACTGCCTCGA GGGTGCTTGATGAATTGAACGCCACGTGGTGCGACCATCCGCCTTGCGCG GAGTAAGGTTTGTCGACCCCGCACAACATAATCTACCCAACCACCATTAT GGGGGCGGCGGGGGGATTTCAGCGAGACTGACCTCGGCTCCGACAGAATG ATGACGGGGTCAACAAAGAGAGCAATGAGAAGAGTATGGCACGACGAACA GAGACGCTAACTATTAATATCGCTGTCGGGCAGGTGTCAATGATGCAGCG GGAGCGGGAGGAGCGTCTGGAAGGGAAGATGGTCTTCTGGGGCAAGGTTG AAGGCAACGAAAACGATTACCTCGTTTGCTATGCATTGGCGACACCAACG CTAGAAGAAGGGGACTTCCCCCTCAAGAAGGCGAGAAAACCTTGCTCTGT GCTTGTTGACCACCTTCTTGCTGCCGCTGCGACTGCTGCTGCTGCCTGCT GTTGTTGAGCTGCTGTTTTATTTTTCACCAACCTCTCCGGAACACTATAC CCAAACCGAACTCACCCAAATCTGATGCCTGGAACATGTTCCCATGCGTT CGCCAGAGTATAAGCCACCCCCGCCCACCCGCCGCCCTCGGTGTTTGCCA TCGGGGTTAGGTTTTCACCGCTTGGCAACGACGTTGTAAAGCAATCCCCC CCCCTCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACG TTGTACAACAACCAATTCACTTCGTGAACTCGGGCAACCAGGTTACCGTT TTGTTTTTTAACCTCGCGTTTTTTGTTGCGGTAACCATACTGGTGGTCGA GTAGACCATGTTGTGCGGGGTCGAGAACCTTTACTCCGCGCAAGGGGGAT GATCGCACCACGTTGTATTAAGATGATCAAGCATCCTCGAGGCAGTTACA CAGTGCTTACAGCTGTCTCTGGAAGTGAAAGCACCAGAAAATTGATTACG TCATACGCAGCTGTCATCCGTACGCAAGGAAGTATACACAAAGTTGCCGA ACACCCTTAACAGGAGGCAGTGCACCCTTCATGCGACTTGCCGAATACCT CACGGCGCTTCGCGCTTGGTAATGTGAGAGCCTGGTCCGGTGAGAACCCG GCGTGCTCTGTTCCGGCTGGGGTGCGAAGTCAACGGTCTAATGACTACGG TATGCACGACTATGAGTACACCCCCCCGCGCCCACCCGCCGCCACGTGCC TCAGTTTTACTTCTGCGTGAGCAGCGACACGTCCCTGCGCCTGATGCCGG CCGTGAAGCCCGAGTACGAGGTCCTGGCGGCGGCTGTGACGGGGAGGCTA AGAGGGGACCCTTCACTTCCCCTCGACGAGGAGCCGGAGGAGGAGGAGCC CCCCGCGGGGGAAGACGAAGAAGAGGTGTGTTTTCAACGTAGATACAGAT AGCGCCCGCACTTGGCAGTTAAGAACTTCGCGCTCAAAACTACATCAAAC ATCATAACCTGGATTCCATTTTCCAGCCCGGGTTCTTTCATGTGGACAGT GCCCGAGCTTGAGAACTTGGCAGATAAATACCTTAGTGCTTTGCATTACA TTATACAGTAGCGCTCGAGGGCTTGGCGGTAAACGGCCTTCGTTCTTGGC ATTACATCAAACAGTAGCGCTTGAGAACTTGGCAGTTTGCTAAGAGCCTC TCGCCTGGCATTGCATCGAACACTACAATATAGCACTCGAGAGCTTGGCA GCAAGAATTCGTGCTCAGCGTTGCATGAAACAGCAGCGCTCGAGAACGTG GTAGTTGAGAAATTTGTGCTTAGCACTACATCAAACCTGAGCACTTTGTG TTAGCCTGGATTAGTCACAAAGCTAACACCTACATGGAGGGCGTTGGTAG CCTACAAGAGGAACCAAGAACTCCAGCCTCGGTCAACACTAGAGGTCCGT AAGCACGGGTGATCTTCTTTTTTGGTTTCTCTTCGATGCGTTGTTAGAAA TACGTACGGCATACACGAAATCCGTTGCTCGGTTTCAAGTTCATTCCCTG GGTTGCGGCCAAATGTATGTTCCTCGCGATGGTCACGTTTGTAGCGTCCA CCGCTATGAATGGCGAGAATTTTTGGGGGCGAAACAGGCAGTAGGTTGTG TGGCTGGCGCTTTACCACAACCTACCACAACCGTCACAGATATCGTCCTT CTCGAAATTCGACCAAACGGAAACGAAACGAAACGAGGGCAAGTATCTAA GTAGCCTCTTATCCCCCCCCCCTGCGTCCTATGGTCCGTCCTCTCGAGGA CGCGTGGTCAATGGTCGAACCGCGAAGGCATGCATTACGCGAGTAGCCCC CTCAGCATCCTTTTCTACCTATGCATGTTTCGTCGATATGCCTACCATGA TACCGCGTGATCCGCCAAGGAGCCCCGCCCCCCGGAGCGATTCTTGGAGA TGCACCGCCTCGCTCACATCGTGAAAACCATCGACCGGGCTGTGGCCGTG GTGCCCAAGGGGGGCCTCCTTGTTGAGGTATGATACACGAACCCGCGCGT CAGAAACTCGTATGTTTCGAGACGTGAGTCTTTCTTGGGTTCCCCATGGA GCACTGAAAGAGTGAGCGGGAAAAGAGAAGTTTTCTAGTACCCGCAATGG CTGTCGGCGCCCGCACGAGAGTGAAAACCATGGGAGATGCTGAAACACCG CAAAAAGGACTCCATCTGCGCCCTGAGGCCATCATTTTCGTGCCTGTGTT CGGACATTCTTGATTCATTCAGGCGTCCCGCAAGATCCGGCCTCACCGCA ACTTCGAGGGTCTGTCCGTAGAGGCGGCAAAAGATCTGAGAAGCTACTTC CACTTCAGGAACCCCGAGAGCATCGAGGTGGGTGCGGAACATACAAAAAT ACAATTCTACTGCATGGAGCTCTCCCGGCCCCGCTTTCCCCACCCGAATT CCTCTTCCCAACCGAATCGGAAATGGGGATCCACCTCTTCTCTGTTAAAC TCGCCCCTTCCCTTCTGTCTCGTGGCGTGACTGCGAATGGCCCCGTACCT CCCTTTCATCCTCCTCTTCCCAACAGGCCATCGCGGCGCTCACGAAGAAG GGCTTGGTGAGAGATGCAGACTTCCTCGACCCCATCGCCGCCGACAAACC GCCGGGGTGCTGGACGCTTTCCATGAACCCCTCGGCGTCGTGCTCAGTAC TGCGTAGTCTAGCGTGGCCAGGGTACTTTTTCTTTCACGAGGTGCGCGCC CAATACACCCACGCGTAGGCAGTATGTATGTAGTCTGCCTAACTTGGGCA AAGACACTAGAAAGTAGAACCATTCTATTGGAAACCACAAACGTTACTGT CGACAGACTTGCTGCAATACAACGAAGACGCCAGGCGCACCACGTACTTC AACTTTGGAGCAGAGCCAACATCAATCTATGTAGAAGTGATAAGGACTTT AGATTTTGCACCCTCTCCGACGAGGAAAGTCGGCATTCATTAATTCTTCG CCCGCAAGATTCATTCTGTTGGGGCAGGAGGTCATTCGAGTGCGGAACAA GAAGATGCGAACGAACCCTCTCAGTATGTCGTATGACATGCAGGGAAGAT ATCGCTGTTGACCAGGGAGCATAAAACCCCCGTACTCGGTATGTTGTCAT CTGCTTCCTACACCGACGAGCGCAGGCGGAAACAGGGGACTACGGCGGGG CATACTTCGGGGACGGGTTGCCGAACACAGATCTGCAGTTCATGCTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:331706..337355+

>mRNA_Ecto-sp6_S_contig86.17739.1 ID=mRNA_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:331706..337355+ (Ectocarpus species6 EcLAC_371)
ATGGTGGATATTTCTCGGCACTTAGACTTCCTCGGACCTTGTGGAAAGAC
ACTCAGCGTCTCCGAGAGGTCAGGATTGCAGGTGTCAATGATGCAGCGGG
AGCGGGAGGAGCGTCTGGAAGGGAAGATGGTCTTCTGGGGCAAGGTTGAA
GGCAACGAAAACGATTACCTCGTTTGCTATGCATTGGCGACACCAACGCT
AGAAGAAGGGGACTTCCCCCTCAAGAAGGCGAGAAAACCTTGCTCTTTTT
ACTTCTGCGTGAGCAGCGACACGTCCCTGCGCCTGATGCCGGCCGTGAAG
CCCGAGTACGAGGTCCTGGCGGCGGCTGTGACGGGGAGGCTAAGAGGGGA
CCCTTCACTTCCCCTCGACGAGGAGCCGGAGGAGGAGGAGCCCCCCGCGG
GGGAAGACGAAGAAGAGGAGCCCCGCCCCCCGGAGCGATTCTTGGAGATG
CACCGCCTCGCTCACATCGTGAAAACCATCGACCGGGCTGTGGCCGTGGT
GCCCAAGGGGGGCCTCCTTGTTGAGGCGTCCCGCAAGATCCGGCCTCACC
GCAACTTCGAGGGTCTGTCCGTAGAGGCGGCAAAAGATCTGAGAAGCTAC
TTCCACTTCAGGAACCCCGAGAGCATCGAGGCCATCGCGGCGCTCACGAA
GAAGGGCTTGGTGAGAGATGCAGACTTCCTCGACCCCATCGCCGCCGACA
AACCGCCGGGGTGCTGGACGCTTTCCATGAACCCCTCGGCGTCGTGCTCA
GTACTGCGTAGTCTAGCGTGGCCAGGGTACTTTTTCTTTCACGAGGCGGA
AACAGGGGACTACGGCGGGGCATACTTCGGGGACGGGTTGCCGAACACAG
ATCTGCAGTTCATGCTGTGA
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