mRNA_Ecto-sp6_S_contig86.17739.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI) HSP 1 Score: 532 bits (1371), Expect = 1.710e-190 Identity = 279/289 (96.54%), Postives = 282/289 (97.58%), Query Frame = 1
Query: 1 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
MVDISRH+DFLGPCGKTLSVSERSGLQVSMMQR+REERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKG LLVEASRKIRP+RNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct: 1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKK------FYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE) HSP 1 Score: 363 bits (933), Expect = 3.620e-125 Identity = 184/194 (94.85%), Postives = 185/194 (95.36%), Query Frame = 1
Query: 286 MPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
MP+VKPEYEVLAAAVTGRLRGDPSLPLDEEPE XXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKG LLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPS SCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML
Sbjct: 1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA) HSP 1 Score: 310 bits (793), Expect = 1.470e-102 Identity = 159/291 (54.64%), Postives = 205/291 (70.45%), Query Frame = 1
Query: 1 MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTG--RLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
MVDI +H++FLGP G +LS ER+GLQVSM+QR++EE L + FWGK+ +E DYL+CY+L P LEEG FP+++ +Y+ S+DT LR MP + E + LAAAV R +GDPSLPLD EPE P ERF E+HRLA+ V ID VAV PKG +L+EASR++ P+R FEGLS EAA ++R+YFH R PE+ A AALT+KGLV DADFLDP+A D+P G W+L+ + + + + LRSLAWPGYFFF + +G++GG YFG GLPNTDL FML
Sbjct: 1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQ------YYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAAP---ERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA) HSP 1 Score: 271 bits (693), Expect = 1.580e-87 Identity = 141/277 (50.90%), Postives = 181/277 (65.34%), Query Frame = 1
Query: 43 GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLD--EEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
G TLS+ E+SGL ++++QR +EE K+ FWGK+ G E DYLV YAL + D P KK FY+C D +LR +P + EY +A ++ GR +GDPS+PLD EE E ERF E+HRL + V+ IDR VAVVP+G L+EAS KI +RN+EGLS EAA DLR+YFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+L+ + S + LRS WPGYFFFH+ T +YGG YFGDGL N DL FML
Sbjct: 14 GCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKK------FYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK-------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA) HSP 1 Score: 229 bits (583), Expect = 9.520e-71 Identity = 130/290 (44.83%), Postives = 181/290 (62.41%), Query Frame = 1
Query: 31 LGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDT-SLRLMPAVKPEYEVLAAAVTGRL---RGDPSL-------PLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
LGP G TLS+ ER+ LQ++M+ +R+E L G++ FWGK+ G NDYL+ YA+ PT FP+KK FY+C +S+ SL MP++ E+E LA T R+ RGDPS DEE E + E F E HRL + V+TID +V+P+G +V+A+ +R +++FEGLS +AA L +Y+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W+L + S + +LRS WPGYFF+H ET +YGG YFGDG+ N D+ FML
Sbjct: 9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKK------FYYCTASNGYSLVQMPSLTEEWEGLAK--TWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNK--EVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN) HSP 1 Score: 214 bits (545), Expect = 4.350e-65 Identity = 122/288 (42.36%), Postives = 168/288 (58.33%), Query Frame = 1
Query: 22 LDFLGPCGKTLSVSERSGLQVSMMQREREERLE-GKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGR-LRGDPSLPLDEEP----EXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
++FL P G LS+SER+GL ++M+Q + E L G + FWG+++G +DYLV AL TP+ FP KK +Y + + MP + EY AA + + G+PS+P P E PE F E H+LA+ V ID VVP+G LV+A+ ++ + +EGL+ EAA LRSYFHFR P+S A AL K G+VR DFLDPIA D P G ++L +PS + +++RS WPG +F+H+ TG+YG Y GDGLPNTD+QFML
Sbjct: 1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKF-----YYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO) HSP 1 Score: 207 bits (528), Expect = 1.780e-62 Identity = 128/291 (43.99%), Postives = 175/291 (60.14%), Query Frame = 1
Query: 16 RHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPL---DEEPEXXXXXXXXXXXXX--PRPPER--FLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
RHLD L G TLSV ER+GL+ M +R+ EE L + FWG++ E DYLV Y P+ E +P K+ FYFC + L+ P + E+ +TG LRGDP L + DEE XXXXXXXXXXX PR P++ F+E HRLAH V +D +++VP+G ++ + + P+ +F GLS A SY HFR P + E + L ++G +RD DFLDP++ D+P G W++ ++ +++RSL WPGYFF H T +GGAYFG+GLPN DL FML
Sbjct: 4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQ------FYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC) HSP 1 Score: 197 bits (502), Expect = 8.680e-59 Identity = 118/284 (41.55%), Postives = 162/284 (57.04%), Query Frame = 1
Query: 19 HLDFLGPC-GKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
H+D L C G TL+ ERS L++ ++R+ E + G M WGK+ G DY+VC A +E D P KK FYFC ++ L+ P V E AAA TGRL+GDPS P+DE + + F E+ RL IV+ ID A ++VP G +V A+ + +R F+GL+ + A+ L SY+H+R +S E +AL++ GLVR ADFLDPI++D G W + + + + VLR L +PG FFH+ TG YG AY GDGL N DL FML
Sbjct: 5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKK------FYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK----------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A1V9YG94_9STRA (Radial spoke protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG94_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.380e-57 Identity = 120/284 (42.25%), Postives = 157/284 (55.28%), Query Frame = 1
Query: 19 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
HLD + G TL+ ERS L+VS +R E + M FWGK+ G+ DY+VC A +E D P KK FYFC ++ L+ P V E +A TGRL+GDPS P+DE + + F E+ RL IV+ ID A ++VP G +V A+ +I +R F+GLS + A L SY+HFR ES+E L + GL+R ADFLDPI D G W L + + + VLR+L +PG FH+ TG YG AYFGDGL N DL FML
Sbjct: 5 HLDIVSRSIGCTLTSQERSNLEVSFTRRYATEGIVS-MRFWGKIVGDAQDYVVCVAF----IEALDAPKKK------FYFCTNTSPELQQFPEVGKEKRDMAIKYTGRLKGDPSRPMDENEDPQDDNNK----------DIFREVDRLVLIVEAIDAAASIVPCGAYVVSATHQIVANRLFQGLSWDRALQLGSYYHFRPAESVERKGVLAQPGLIRPADFLDPITIDLD-GVWDLRQDNTGAAVVLRNLQYPGSVGFHKPRTGAYGFAYFGDGLKNPDLAFML 266
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Match: A0A485LRP6_9STRA (Aste57867_23175 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRP6_9STRA) HSP 1 Score: 193 bits (491), Expect = 4.020e-57 Identity = 118/287 (41.11%), Postives = 158/287 (55.05%), Query Frame = 1
Query: 19 HLDFLG-PCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKARKPCSFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDE---EPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGGLLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 867
HLD + G T++ ERS L+V ++R E ++ M FWG++ G DY +C A +E D P KK F+FC ++ L+ P V + AA TGRL+GDPS +DE EP+ + F E+ RL IV+ ID +VVP G +V A+ +I P+R F+GL E A L SY HFR + E +A+ GLVR ADFLDP+ D G WTL +P+ S VLR+L +PG+ FFH+ TG +G AYFGDGL N DL FML
Sbjct: 5 HLDIVSRSIGHTVTSQERSNLEVGFIKRNATENIDS-MRFWGRIFGEAQDYTICVAF----VEGVDAPKKK------FFFCTNTSPDLQQFPEVGKDKRDKAARFTGRLKGDPSRLMDENETEPQEGETK------------DVFREVDRLVLIVEAIDYQASVVPCGAYVVSATHQIVPNRLFQGLPWEKALQLGSYHHFREATTAERKSAIATPGLVRPADFLDPLTVDLD-GTWTLRKDPTGSAVVLRNLVFPGFVFFHKPRTGQFGSAYFGDGLRNPDLAFML 267 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17739.1 >prot_Ecto-sp6_S_contig86.17739.1 ID=prot_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=290bp MVDISRHLDFLGPCGKTLSVSERSGLQVSMMQREREERLEGKMVFWGKVEback to top mRNA from alignment at Ecto-sp6_S_contig86:331706..337355+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17739.1 ID=mRNA_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5650bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:331706..337355+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:331706..337355+ >mRNA_Ecto-sp6_S_contig86.17739.1 ID=mRNA_Ecto-sp6_S_contig86.17739.1|Name=mRNA_Ecto-sp6_S_contig86.17739.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:331706..337355+ (Ectocarpus species6 EcLAC_371)back to top |