mRNA_Ecto-sp6_S_contig86.17734.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig86.17734.1
Unique NamemRNA_Ecto-sp6_S_contig86.17734.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A835ZFS4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS4_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.190e-67
Identity = 121/229 (52.84%), Postives = 150/229 (65.50%), Query Frame = 3
Query:   33 MSLPSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVE-PFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIK 716
            M+LPSL+HF++++YD FYEP++DTYLL+DAL AD   L  +V+P VCLEIGPGSG +T AL+ LL E                  L +A +IN  AA        AN+V  P EVV  DL   +   L G VDVL+FNPPYVPTPPEEVG++   DIAAAWAGG RGREVIDR LP    LLS  G FY+V V++N P EI+SVM+G G+  +    RRAKNE L ++K
Sbjct:    1 MALPSLEHFSYKDYDTFYEPSDDTYLLLDALDADRRFLADTVQPSVCLEIGPGSGAITTALATLLAEERGFS-------------LMLAVDINASAATXXXXXXAANSVTLPVEVVQGDLANALERGLSGRVDVLVFNPPYVPTPPEEVGTQ---DIAAAWAGGRRGREVIDRVLPQAAALLSNKGVFYLVVVQENRPQEIMSVMKGLGLSGQTACTRRAKNELLSILK 213          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A7S2RT88_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT88_9STRA)

HSP 1 Score: 193 bits (490), Expect = 4.700e-56
Identity = 114/237 (48.10%), Postives = 139/237 (58.65%), Query Frame = 3
Query:   27 LAMSLPSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE*T 737
            +A  LPSLDH  F +Y H YEPAEDTYL +DAL  D   L+  + P V LEIG G+G+V+  LS  L                  R    A ++N RAA     TA  N VE  EVV  DL   +  RL G VDVLLFNPPYVPTPPEEVGS+    I A+WAGG  GREVIDRFLP V +LLS  G  Y+V V++N P ++ S++   G+    VL +RA+NE L V +   QE T
Sbjct:    3 MATPLPSLDHVLFTDYHHVYEPAEDTYLFVDALTQDTAFLK-ELEPLVSLEIGAGTGVVSTHLSRALGR----------------RMAHFATDVNTRAAEISKATATENGVESMEVVVGDLATGLHHRLSGKVDVLLFNPPYVPTPPEEVGSQ---GIEASWAGGIDGREVIDRFLPLVPDLLSDKGQLYLVLVQENRPDDVCSILGKAGLAGSCVLEKRARNELLSVWRFGRQEVT 219          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: C3ZRS9_BRAFL (MTS domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZRS9_BRAFL)

HSP 1 Score: 190 bits (483), Expect = 4.730e-55
Identity = 104/225 (46.22%), Postives = 134/225 (59.56%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIK 716
            P L H    +YDH YEPAEDT+LL+DAL+ DADLLR S+ P +CLE+G GSG V   L ++L                  RP ++  ++NPRAA     T   NN+    V+  DL   +  RL   VDV++FNPPYV TPPEEVGS     I A+WAGG +GREV+DRF P V  LLS  G FY+V +E NDP EI   MR +G   + V+ R+A  E L +++
Sbjct:    8 PDLSHLTAEDYDHVYEPAEDTFLLMDALEKDADLLR-SIAPSICLEVGCGSGAVITFLGSILGS----------------RPHYLCTDLNPRAAECAARTGTQNNISVHPVLT-DLVSALLPRLENKVDVMIFNPPYVVTPPEEVGS---HGIEASWAGGVKGREVMDRFFPLVPRLLSDNGVFYLVTIEQNDPEEIGCKMREFGFTMDKVMSRKAGPEKLAILR 211          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A667XGW5_9TELE (N-6 adenine-specific DNA methyltransferase 1 n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XGW5_9TELE)

HSP 1 Score: 188 bits (477), Expect = 3.480e-54
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLF-MAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE 731
            P   H    ++   YEPAED++LLIDAL+ DAD L+  +RP VC+E+G GSG+V+A L++L+                  R  F +  ++NP AA     TA  N+V   + V  DL  C+  RL G VDVLLFNPPYV TP EEVGS   R I AAWAGG RGREV DRFLP V +LLS GG FY++ + +NDP EIIS++  +G+     L RRA NE L V++    +
Sbjct:    8 PIYSHAGRGDFQDVYEPAEDSFLLIDALEQDADRLQQ-LRPAVCVEVGSGSGVVSAFLASLI-----------------GRSAFHLCTDVNPAAARCTAQTASCNSVS-LQPVITDLVECLLPRLCGKVDVLLFNPPYVVTPSEEVGS---RGIEAAWAGGRRGREVTDRFLPVVSQLLSTGGLFYLITIAENDPEEIISLLADFGLKGVSCLSRRAGNERLSVLRFHRTQ 216          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: UPI001FB5CE8A (methyltransferase N6AMT1 n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB5CE8A)

HSP 1 Score: 186 bits (473), Expect = 1.410e-53
Identity = 108/232 (46.55%), Postives = 140/232 (60.34%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE*T 737
            P   H     +   YEPAED++LLIDAL+ DA+ L+  +RP VCLE+G GSG+V+A L++++                    L++  ++NP AA     TA  N+V   + V  DL  C+  +L G VDVLLFNPPYV TP EEVGS   R I AAWAGGERGREV DRFLPAV +LLSP G FY++ + +NDP EII  +  YG+  E  L  RA NE L V++    + T
Sbjct:    8 PVYSHAGRGVFQDVYEPAEDSFLLIDALEKDAERLQL-MRPCVCLEVGSGSGVVSAFLASVV----------------GPSSLYICTDVNPAAARCTAETASCNSVS-LQPVITDLVECLLPQLCGKVDVLLFNPPYVVTPSEEVGS---RGIEAAWAGGERGREVTDRFLPAVAQLLSPAGLFYLITIAENDPEEIIRSLVRYGLKGESCLSTRAGNERLSVLRFHRSKQT 218          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A3B4TLX7_SERDU (N-6 adenine-specific DNA methyltransferase 1 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4TLX7_SERDU)

HSP 1 Score: 186 bits (472), Expect = 1.930e-53
Identity = 107/232 (46.12%), Postives = 139/232 (59.91%), Query Frame = 3
Query:   36 SLPSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE 731
            S P   H     +   YEPAED++LLIDAL+ DA  L+  + P VCLE+G GSG+V+A L++++                    L++  ++NP AA     TA  NNV   + V  DL  C+  RL G VDVLLFNPPYV TP EEVGS   R I AAWAGG+RGREV DRFLP V +LLSP G FY++ V +NDP EII+++  +G+  E  L  RA NE L V++    +
Sbjct:    6 STPDYSHAGRGHFRDVYEPAEDSFLLIDALEIDAQRLQL-MSPCVCLEVGSGSGVVSAFLASVV----------------GPSALYICTDVNPAAAQCTEKTASCNNVS-LQPVITDLVDCLLSRLSGKVDVLLFNPPYVVTPSEEVGS---RGIEAAWAGGKRGREVTDRFLPLVPQLLSPKGLFYLITVAENDPDEIINLLGKHGLKGESCLSTRAGNERLSVLRFHRSQ 216          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A8K0A4Y3_BRALA (N6AMT1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A4Y3_BRALA)

HSP 1 Score: 186 bits (471), Expect = 3.070e-53
Identity = 103/225 (45.78%), Postives = 136/225 (60.44%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIK 716
            P L H    +Y+H YEPAEDT+LL+DAL+ DAD LR S+ P  CLE+G GSG V   L ++L                  RP ++  ++NPRAA    +T K NNV   + V  DL   +  RL+  VDV++FNPPYV TP EEVGS   R I A+WAGG +GREV+DRF P V +LLS  G FY+V +E ND  EI S MR +G   + ++ R+A  E L +++
Sbjct:   10 PDLSHLTAEDYEHVYEPAEDTFLLMDALEKDADFLR-SIAPSFCLEVGCGSGAVITFLGSILGS----------------RPHYLCTDLNPRAAQCAAMTGKQNNVY-VQPVLTDLASALLPRLQNKVDVMIFNPPYVVTPTEEVGS---RGIEASWAGGVKGREVMDRFFPLVPKLLSEKGAFYLVTIEQNDVEEIGSKMRTFGFTMDKIMSRKAGPEKLTILR 213          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A167P268_PHYB8 (MTS domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167P268_PHYB8)

HSP 1 Score: 185 bits (470), Expect = 3.710e-53
Identity = 101/230 (43.91%), Postives = 139/230 (60.43%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE 731
            P L H   +++D  YEPAEDT+LL+DAL+ DA  L+ S   R+CLEIG GSG VTA L+ ++ +                  +++  +INP A  A   TAK N V   E +   L   +  RL   VDVLLFNPPY  TPPEEVGS     I AAWAGG  GR+VID  LP V++LLSP G FY++ + +N P E++ +M+ Y + AE+V+ RRA  E   ++K++H++
Sbjct:    5 PDLSHLTTKDFDRLYEPAEDTFLLLDALEEDATWLQ-SNNSRLCLEIGSGSGCVTAMLAKIIGKQ---------------NAVYLTTDINPYACKATQQTAKHNGVSLVETLQTSLVGSLLPRLTHSVDVLLFNPPYAVTPPEEVGSN---GIEAAWAGGIDGRQVIDALLPFVEKLLSPNGVFYLLLINENHPLEVVDIMKSYHMRAEIVMERRAGRERQYILKIQHEQ 215          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: A0A3B4BHK5_9GOBI (N-6 adenine-specific DNA methyltransferase 1 n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BHK5_9GOBI)

HSP 1 Score: 184 bits (466), Expect = 1.550e-52
Identity = 103/230 (44.78%), Postives = 141/230 (61.30%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE 731
            P   H    E+   YEPAED++LLIDAL+ DA++L+    P VCLE+G GSG+V+A L+++L                    L++  ++N  AA     T+  NN+   + V  DL   +  RL+G VDVLLFNPPYV TP EEVGS     I AAWAGGERGREV+DRFLP V +LLS  G FY++ + +N+P EI+SV+   G+  ++ L+ RA NE L V++ R +E
Sbjct:    8 PFYSHTGRGEFSEVYEPAEDSFLLIDALEKDAEMLKER-SPSVCLEVGSGSGVVSAFLASVL----------------GPAALYICTDVNTAAAKCTAKTSSCNNIS-LQPVITDLVDGLLPRLKGKVDVLLFNPPYVVTPSEEVGSS---GIEAAWAGGERGREVVDRFLPVVSKLLSKNGLFYLITIVENNPDEIMSVLGECGLSGDICLKTRAGNERLSVLRFRWRE 216          
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Match: H2LK00_ORYLA (N-6 adenine-specific DNA methyltransferase 1 n=6 Tax=Oryzias TaxID=8089 RepID=H2LK00_ORYLA)

HSP 1 Score: 182 bits (463), Expect = 4.340e-52
Identity = 106/229 (46.29%), Postives = 136/229 (59.39%), Query Frame = 3
Query:   42 PSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEIGPGSGLVTAALSALLREXXXXXXXXXXXXXXXXRPLFMAAEINPRAAAACVLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGSKFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEIISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQ 728
            P   H    E+   YEPAED++LLI+AL+ DA+ LR S  P VC+E+G GSG+V+A L++++                     F+  ++NP AA     TA  N V   + V  DL   +  +L G VDVLLFNPPYV TP EEVGS   R I AAWAGGERGREV DRFLP V ELLS  G FY++ + +NDP EII ++R  G+  E  L  RA NE L V++ R +
Sbjct:    8 PDYSHAGRGEFRDVYEPAEDSFLLINALERDAEALRSS-NPDVCVEVGSGSGVVSAFLASVI----------------GPSAFFICTDVNPAAAVCTAKTASCNGVS-LQPVVTDLVESLLPQLSGKVDVLLFNPPYVVTPSEEVGS---RGIEAAWAGGERGREVTDRFLPLVGELLSLKGVFYLITIAENDPEEIIRLLRASGLQGESCLSARAANERLAVLRFRRK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFS4_9STRA5.190e-6752.84S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S2RT88_9STRA4.700e-5648.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
C3ZRS9_BRAFL4.730e-5546.22MTS domain-containing protein n=2 Tax=Branchiostom... [more]
A0A667XGW5_9TELE3.480e-5446.75N-6 adenine-specific DNA methyltransferase 1 n=1 T... [more]
UPI001FB5CE8A1.410e-5346.55methyltransferase N6AMT1 n=1 Tax=Mugil cephalus Ta... [more]
A0A3B4TLX7_SERDU1.930e-5346.12N-6 adenine-specific DNA methyltransferase 1 n=4 T... [more]
A0A8K0A4Y3_BRALA3.070e-5345.78N6AMT1 protein n=1 Tax=Branchiostoma lanceolatum T... [more]
A0A167P268_PHYB83.710e-5343.91MTS domain-containing protein n=1 Tax=Phycomyces b... [more]
A0A3B4BHK5_9GOBI1.550e-5244.78N-6 adenine-specific DNA methyltransferase 1 n=2 T... [more]
H2LK00_ORYLA4.340e-5246.29N-6 adenine-specific DNA methyltransferase 1 n=6 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:239454..244376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score191.8
Seed ortholog evalue3.6e-46
Seed eggNOG ortholog7739.XP_002588718.1
Preferred nameN6AMT1
Model size1227
KEGG koko:K19589
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0019538,GO:0030307,GO:0032259,GO:0032991,GO:0036211,GO:0040008,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045927,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0065007,GO:0071704,GO:0140096,GO:1901564
Exons6
EggNOG free text desc.Methyltransferase small domain
EggNOG OGs39XP3@33154,3BIZ2@33208,3CZB8@33213,486TK@7711,COG2890@1,KOG3191@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-07_000990.1
EC2.1.1.297
Cds size702
COG Functional cat.J
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17734.1prot_Ecto-sp6_S_contig86.17734.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig86 239486..243883 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350488.6385536-UTR-Ecto-sp6_S_contig86:239453..2394851682350488.6385536-UTR-Ecto-sp6_S_contig86:239453..239485Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig86 239454..239485 +
1682350488.7168856-UTR-Ecto-sp6_S_contig86:243883..2443761682350488.7168856-UTR-Ecto-sp6_S_contig86:243883..244376Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig86 243884..244376 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350488.651465-CDS-Ecto-sp6_S_contig86:239485..2396371682350488.651465-CDS-Ecto-sp6_S_contig86:239485..239637Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 239486..239637 +
1682350488.6616135-CDS-Ecto-sp6_S_contig86:241048..2412201682350488.6616135-CDS-Ecto-sp6_S_contig86:241048..241220Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 241049..241220 +
1682350488.6708927-CDS-Ecto-sp6_S_contig86:241588..2417161682350488.6708927-CDS-Ecto-sp6_S_contig86:241588..241716Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 241589..241716 +
1682350488.6811266-CDS-Ecto-sp6_S_contig86:242631..2427131682350488.6811266-CDS-Ecto-sp6_S_contig86:242631..242713Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 242632..242713 +
1682350488.6931233-CDS-Ecto-sp6_S_contig86:243161..2432631682350488.6931233-CDS-Ecto-sp6_S_contig86:243161..243263Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 243162..243263 +
1682350488.7046268-CDS-Ecto-sp6_S_contig86:243817..2438831682350488.7046268-CDS-Ecto-sp6_S_contig86:243817..243883Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 243818..243883 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig86.17734.1

>prot_Ecto-sp6_S_contig86.17734.1 ID=prot_Ecto-sp6_S_contig86.17734.1|Name=mRNA_Ecto-sp6_S_contig86.17734.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=234bp
MSLPSLDHFNFREYDHFYEPAEDTYLLIDALQADADLLRYSVRPRVCLEI
GPGSGLVTAALSALLREEKEETPSQPPPPPPPPRPLFMAAEINPRAAAAC
VLTAKANNVEPFEVVCCDLDICMRDRLRGLVDVLLFNPPYVPTPPEEVGS
KFCRDIAAAWAGGERGREVIDRFLPAVKELLSPGGFFYMVAVEDNDPTEI
ISVMRGYGVHAEVVLRRRAKNEALCVIKMRHQE*
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mRNA from alignment at Ecto-sp6_S_contig86:239454..244376+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig86.17734.1 ID=mRNA_Ecto-sp6_S_contig86.17734.1|Name=mRNA_Ecto-sp6_S_contig86.17734.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4923bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:239454..244376+ (Ectocarpus species6 EcLAC_371)
AGCAGTCTCTCCACCTCTCTCACTGGCTTGCAATGTCCCTGCCTAGCCTG GACCACTTCAACTTCCGAGAGTACGACCATTTCTACGAGCCAGCGGAGGA CACCTATCTCTTGATCGATGCCCTGCAGGCTGATGCGGACCTATTGCGAT ACAGCGTCCGGCCAAGGGTGTGCTTGGAGATAGGGTAAGATTCACGGCGG TGGTGCTCATGGTTACCCAGAAAGAAAATGGACCGCCTCTTTCCTCTTGG TAGAAAAAACAAGCTCAAGCTCGGCAACATGTGGTGTACATCTTCACCGA GTGAGCTGTAAGGGAGGGAGCTATCAAGGGGAGGGCGGATGATGCAAAAT GCGGCAATGCGGCACAACTCCAGTTCAATGCGGCTCAACCTCAAATTCCA ACCTCGGTGGCCGTCTCCGGCTGGGATGTCTCTCTCTGACAGTAACTTGT TGCTGAAGCAGGTGCTGAGAGTGTAGCGCGTGGATTGTCAGCTATGCTTA AACGAAGAACACCAAAGAGCGTTGTCCAAGCTGCAACTCTCTCCATCGAT ATCTTCTTACGCCCGCTACCTAGCGGTGGAGCACATTTCGTACAATATAC AAGGGCGCTTCGTGGCGTACCGCTTCGCGGTCGCCGCTACGCTCGTAGGT TCAATGGCGATGGCAAGTGTGTGCGGTGGTGTGGAGTTTTGAAATGATAG ATACGAAGAAAAAATGCTGCAAAGAGGGAAAAAGTCGATTCATTGTTGTT TGTTCGAAGGAGCATTCATTGGTTGTGCGACAGCCGGAGGACAAAGTGAG TATTATTTACTCGGAGTAAGAATTTATTTTTAAGAAACAAAGGCAGGAAA GAAAGTAACATAATACATAGCTCAACCTCTGGGCCACACAATAGAAGAAG CGCCTCTGACTCAATAAGAAAACAGACGAGCGACCCCTAAAATACTCTAC TATTCGTAAGACACGAGGGGTTACGGGGGGGGAGGGGAGTGAGTGAGTGT GTCGAATAATAAAACTTGAGAAAGATACACCAAGCAAACAGGTTCTTTTC TCTCTCTCTTCCCCCTCTCGCATGTGCTACCCACCGCCTCAGAAACCGCG AAAAAAGGGCTCTAGGCTCACGAGAGCATCAGGATTGCATTTCCTGCGAT CTCGTGAGCCCTCAGCCCGTAGAAAATCCGTTTATAGGTCTATGCGCAAC ATGCCGACTGCCATTTCTTTGAAGAGTCTACACTATGGCTCAGCCACGAC GTTGTTGTTGGCATTAATGGTGACAGGCTACCCAATACGTTGAAATCACC ATCAAATGCAGCTCGTTTTCTGCAGTTCAGCGAGCTCACAAACCACTACT GTGGCGTGCCTTAGCGTCCAAACATCGGCACGTGTGTTCGTAGTTTCCGG TATTCTGGCACACGTGACCGAAGGTTGCCTGAACCCCCTGCATCGCGTGC CATCGATCCCCCAATATCCATAATACGCCACTGCGGCTTCAATCCTGCTG CTGCCAGAGGTTGCTGTGCATCCTCGTCGAATATGCCTGTACAACAACGA TGCCACCCATATCCCTCCCGGCGACCTTCTGAACTCACAACGTAGGCCAG GCAGCGGCCTAGTGACGGCGGCCCTCTCCGCGTTGCTGAGGGAAGAGAAG GAGGAGACACCCTCGCAGCCTCCGCCGCCGCCGCCCCCACCACGGCCGCT CTTCATGGCCGCGGAGATTAACCCGCGGGCTGCCGCGGCTTGCGTGCTCA CGGCGAAGGCCAATAACGTGCGATGCAATAGAGGGTTAAGCCACTCAGAT TTCATGCTGGGGGTTCCTTTGATCGTATTCATGTCTGCAGACTAGAGCTG TGTGGTGATAAAGCTCGGGGTACATACTGCCCTGCTCCAGAGCTGAGAAA TTGTGTTGGGGTCCCTGGCTAGACCTGAGTGCAGGGAGAAAGATAGGGGG AGTTTCCTCCTCCAAGACCTTGTCGATATCAACACTCAAGAAGGCTTGGC GGTGATGGCCTGGCTACTAAATAGCCAGGCCTGTTACCTGCACAGAGACG GAAGCGAGTTCGACTACCCCTAAACTGGGACAGGCTAGCATCGCTGCCCC CAACACCATCCGTTCTTGCACGCCATTCTCGACAGGTGGAGCCGTTCGAA GTTGTCTGCTGCGACCTCGACATCTGCATGCGGGATCGCTTGAGAGGTCT GGTCGACGTCCTGCTGTTCAACCCTCCCTATGTTCCAACACCACCGGAGG AGGTCGGTTCAAAGTGAGAGAATACACCGCACCGGGGGGGCGGGGGCGTA CTCATGTAAACGCACGCCGTGGTCGTTTGGCCATTGGCCTCTCATCCCGG GACGGAGCGATATGCCGGGTTTTCTGTGGCCCAGGCTACGTTTCACAAAC ATGAACTAGAAGCTGGCCATTGTCTTGCGTGTGCTGTGCCAAACCAGATA CGCCGCAGCACAGGGGGGGAAATGACCGAGCACTGCTGTAAGCATTGATA CTCTAAGCGATACCGTAGATTGCTTAAGATACTACACCCCCTGGACCGAT TATCAAAGCTCGATTTCTCCACGACAAAGAGGATGCCGAAGGCAAACGAT ACGTGTTCAGAAAACTCTCGACGGCACAGTTTCCAACTCCGCCGTTTTCG GCACCGTCACTGCTTTCCCACTCGACTAATCAAGCTTTGAAAATCGACCC AAGGGGTGTGATATCTTACGCAGCCTACGGTAGTTGGCTCAGCAGACGGT GTCGCTTTACTGTTGGCGGTGGGTGGTGACGATAGCTGGGCTTACAGCGA TCTGCCCTTTGCTCAGTAGTGGAAACCTACGTCGTGTGTTCTCCATGGTG TCTTGCATCCATTATTGACGGGCGGATGTCCCCCGCGCTGAGCAGAAGAG TCTTCTTGAGGCCCGGGTTTCATGTGAAGAAGACCGGGTAGGCAGGGGTT GAAATACGGGTTAGGTAACTCTGTCGGTCGTTCTATCCAGCTGGTGGAAC CCCTTCTTGACGGTGGAGTCTTGTGCCTCCAGTCTGTGTTTTTTCTCAAC AGCGCCTTTGCCCTGACTTGCGTGCACCTCTGCGGATATCTGCTAGACTC TTGTCCGCCCTCTTGCCTTCTCGACGAGCTTTTTTTTTTTGTGCAACGAT TATTGTCGGAACGCCGCGTCTTCGTGAGATTTTGCAGGGATATTGCAGCC GCCTGGGCAGGGGGTGAACGGGGACGAGAAGTCATTGACAGGTTTCTACC GGCAGTTAAGGTGCGGCGGGTTACGAGTTGGCGGGACTAGAAACACACAG TGTGTCTCGCAGGCGAAAAGCGTCACGTGTAGCACAATTTTACGTGCGGA CCAACTCCACGTACTCATACAGACGCTGAACACGACGTCTCTAACGACGT GTTGAGGAACGAGTTCCACTCATGACGAATGGCACGCTCAGTCTTCAAGT AGGCAAAGCTTATGCTTTACTCTGGACATGCACAAGAGAAAACGAGGTTT ACGCAATGGTTGGGGTTTGCATTAGAGAGCCGGCTGGTGCAAAACTTGAC CCGATCTTCTGCACACGCACTGCCTACCTGGTTCCGCAATGTCTTGGGGG GAGCGCCTTGGCTTCGGGGATGAGAGCTGAGAGTTGCAGCACAAGCGTGT GGGCATTAGACATCGATGGCAGAATGTGATGCCGTGACCATCCTTGCCCT TTTTCCAGGAGCTCCTAAGCCCGGGCGGCTTCTTCTACATGGTGGCTGTG GAGGACAACGATCCGACAGAAATCATTTCCGTCATGCGGGGCTACGGCGT GCACGCTGAGGTGAGAGAACCAAAAAGTGCACCTCACTACTGTACTTCGA TCTTGACGAGAAGACCCGCAGTGCCCACGTTTTTCCTCCGCCCACGACCA AAGCAGATCCAGGGGGTTCGAATATTAACCAAATATCTGCTGCAGAAAGG CCGATGTATCTTAGGTAGGTATTCCACCCTCGATCCTTCTTCTTGTGTTG TACTTCGTGAAGGTGGCCGGCCCCCTGGTGAACAGCGCGAGCGACCCATC CCTCGTTGATTCGAATATCGTTGCAATGTCGACGGGCTCATTTCCTCGGA GACCCCTTTCAAGCACACTTGGACTATCTGGGCGTCTTCGAGAGGTAGTC ACCGGGTCACAGGTTTTTCCCCTGGGTTTCAAACGTCTGCGTGTTTCATG AGTCAACTCGACAAGCCATATCCAGACCACGGCTCAATCCTCAAGATAAC GGTTGTTGTGATGGTATTCCTTTGGCCACAACCACGCTTGCACAAACCCC CGCGTTCCTAGCGAGTGCTTGATCGACACATACCGTACCCCCTACGTCCC GGGACTGCTGTTAGGTGGTTCTCCGTCGGAGGGCGAAAAATGAAGCACTG TGCGTCATCAAGATGCGTCACCAGGAGTGAACGAAAGGGTGCTCGGAGTT TATCGTGTGGGATGTTCACGAACGATTTACTAATCCCCTTTGGGTTTAGC TCTTTTTTTTTCGGCATAAAAAACAAGGTAGGAGAGAGTGCGGGAGAGAG AGAGGAGTACAGCAGAAAGAGACGAGTGTACTTCTGTAGGCGCAATAGCT ATCTCCACACATGGGCCATGAGGGCAGCCCGCGATAGGACGGTGGGCACA GACAGGATCATAGAAGGGTTGATGCGTGGTCGCGGTGCGGTCGGTAGGGC AGGTTAGGCTTGTAGACCTCGAAAAGATCAATCGTCAAGACGCCTAAACT ACTCTATCTTCAGTATATTCCAATGATCAGTGAAAATaATCAGTGACAGG GCTTGCAGACCCATAGCTGGTTATTGTGCTTCTGTACTTCTCTGCCCCCT CCCCAATGTGAGCCCTGCCGGCTCACTACAGCTCCTGTGATTTTCCCACA ATTCCCACAAGCACGCAGGCACA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:239454..244376+

>mRNA_Ecto-sp6_S_contig86.17734.1 ID=mRNA_Ecto-sp6_S_contig86.17734.1|Name=mRNA_Ecto-sp6_S_contig86.17734.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=702bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:239454..244376+ (Ectocarpus species6 EcLAC_371)
ATGTCCCTGCCTAGCCTGGACCACTTCAACTTCCGAGAGTACGACCATTT
CTACGAGCCAGCGGAGGACACCTATCTCTTGATCGATGCCCTGCAGGCTG
ATGCGGACCTATTGCGATACAGCGTCCGGCCAAGGGTGTGCTTGGAGATA
GGGCCAGGCAGCGGCCTAGTGACGGCGGCCCTCTCCGCGTTGCTGAGGGA
AGAGAAGGAGGAGACACCCTCGCAGCCTCCGCCGCCGCCGCCCCCACCAC
GGCCGCTCTTCATGGCCGCGGAGATTAACCCGCGGGCTGCCGCGGCTTGC
GTGCTCACGGCGAAGGCCAATAACGTGGAGCCGTTCGAAGTTGTCTGCTG
CGACCTCGACATCTGCATGCGGGATCGCTTGAGAGGTCTGGTCGACGTCC
TGCTGTTCAACCCTCCCTATGTTCCAACACCACCGGAGGAGGTCGGTTCA
AAATTTTGCAGGGATATTGCAGCCGCCTGGGCAGGGGGTGAACGGGGACG
AGAAGTCATTGACAGGTTTCTACCGGCAGTTAAGGAGCTCCTAAGCCCGG
GCGGCTTCTTCTACATGGTGGCTGTGGAGGACAACGATCCGACAGAAATC
ATTTCCGTCATGCGGGGCTACGGCGTGCACGCTGAGGTGGTTCTCCGTCG
GAGGGCGAAAAATGAAGCACTGTGCGTCATCAAGATGCGTCACCAGGAGT
GA
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