mRNA_Ecto-sp6_S_contig86.17732.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: D7G1H5_ECTSI (Regucalcin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H5_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 1.320e-224 Identity = 304/328 (92.68%), Postives = 308/328 (93.90%), Query Frame = 1
Query: 307 MLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
MLAEG+SWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGG RGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAG +DEYEQLPNTRLNDGR CDRQGRFLCGGINLENIDQPPD+WKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGR MYA ETPLQKIARYDYNPDTGDITNKRVFVELEEGYPDGATVDTEGCVWVA+FSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG
Sbjct: 1 MLAEGVSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGGEDEYEQLPNTRLNDGR----------------CDRQGRFLCGGINLENIDQPPDLWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQKIARYDYNPDTGDITNKRVFVELEEGYPDGATVDTEGCVWVAMFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 312
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A835YSU6_9STRA (Regucalcin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU6_9STRA) HSP 1 Score: 274 bits (701), Expect = 4.940e-82 Identity = 162/391 (41.43%), Postives = 214/391 (54.73%), Query Frame = 1
Query: 133 VLVVAAATAAFAVAYAIARPRKLKRRNDVTGRLQN-LVWHKPLSELPTEGAVLLVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNK-RVFVEL--EEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRL-EGVKGIPEPRFRG 1290
V ++A A A AV YA + +RR D R + L W L ++P VLL++ ++ EG+ W+ Q L WVDI G+ + RL ++ E W++ R LREG K PL++ FEDGF L +P T A +Y Q N RLNDGR CDRQGR +CGG+NL++ID+ DVW +++ E ++LP +RCYN T FSPDGR MY +TP ++I YDY+P TG+I+ K RV E EEG PDGATVD G VWVA F G + +P+G +R I +P AK TTC IGGP LD LFITSA +GL D + +QP AG + AI+L +G +GIPE RF G
Sbjct: 5 VALLATAAVAAAVIYAGLQ----RRRKDAARRTTHTLAWTGALEDIPENEPVLLMECNALVGEGVVWDAKTQALRWVDIEGRRLYRLRYQTRE-----------VVSWELPKRASMACLREGA-ESDKATLPLLMGFEDGFALYNPET------RATQYLPGDYVQEGNIRLNDGR----------------CDRQGRLVCGGVNLDHIDEALDVWHATVSTYQIGEDMRANQVLPGP-YRCYNATSFSPDGRTMYMADTPSKQILAYDYDPMTGNISGKPRVLKEFTEEEGNPDGATVDASGNVWVAEFWAGRINCIAPDGSTVRRIEIPHAKRTTCCCIGGPQLDTLFITSACIGLTDGELKQQPWAGGLMAIKLGKGFRGIPEARFFG 356
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A2V6PCN5_9BACT (SGL domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PCN5_9BACT) HSP 1 Score: 207 bits (528), Expect = 8.020e-58 Identity = 124/330 (37.58%), Postives = 175/330 (53.03%), Query Frame = 1
Query: 307 MLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVEL--EEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
+L EG W+ +Q+L+WVDI G+++ R + D + W V GSLA+R G G LV+A GF DP+TG + + AA D E R NDG+ DRQGRF G ++ P+ +P ++RL+ R+ + C N C+SPDGR MY +TP + + +D++PD+GDI N+RVFV + EG PDGA VD EG VW+A + V R+ P G + R +P+P + TC A GG LD+L++TSA+VGL++ +R QP AG V A+ GV G+PE RFRG
Sbjct: 13 ILGEGALWDAADQKLYWVDIKGRLVHRFDPVTGVDQQ-----------WAVAEDVGSLAVRTGSG--------LVLALRSGFHFFDPATG--ITSLVAAPESDRSEN----RFNDGKT----------------DRQGRFWAGSMH------DPET-RPTGALYRLDADLTCTRMT--DGLICSNTLCWSPDGRTMYHADTPTRTVWAWDFDPDSGDIANRRVFVRVPEHEGAPDGAAVDAEGFVWIAHWDGWRVTRYDPAGRVARVVPLP-VQRATCPAFGGAQLDVLYVTSATVGLSEGERARQPWAGGVLALD-PGVHGLPEARFRG 290
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A6J4XEK8_9DELT (Gluconolactonase family protein n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XEK8_9DELT) HSP 1 Score: 196 bits (499), Expect = 1.110e-53 Identity = 120/336 (35.71%), Postives = 175/336 (52.08%), Query Frame = 1
Query: 289 LVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEE--GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
+VD +L EG +W+ EQ L+WVDI K +R + + D ++ W R GS A RE GG L+VAFE G +P++G + L TR NDGR CDRQGRF+ GG+N D P + V+RL+ +I+ + C N TCFSPDG MY +TP +I YDY+ DTG + N+RVF + + G PDG+ VD EG +W A ++ V R+ P+G + R + +P N TCVA GG DLD+L++T+A + +Q +P +G +FA++++ V+G+ EP+F G
Sbjct: 7 VVDCQNILGEGPAWSVDEQRLYWVDIE-KSELRCYDPATGD----------SKVWKTPERVGSFAFREPGG--------LLVAFESGLDFWEPASG------QPRRIQSFEPDLTTTRTNDGR----------------CDRQGRFIVGGMN------EADTGDPISNVYRLDHDLRSHKIISN--VTCANSTCFSPDGMVMYFADTPTGQIWAYDYDADTGAVANRRVFADFSDQPGLPDGSIVDAEGFLWNAQWNGYRVVRYRPDGTIDRIVDIP-VMNPTCVAFGGKDLDVLYVTTARYLMTPEQIEAEPLSGGLFAVKVD-VQGLNEPKFSG 291
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A370L027_9HYPH (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Bosea caraganae TaxID=2763117 RepID=A0A370L027_9HYPH) HSP 1 Score: 193 bits (491), Expect = 1.520e-52 Identity = 128/340 (37.65%), Postives = 170/340 (50.00%), Query Frame = 1
Query: 280 AVLLVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGG-RVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVEL--EEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
A LL+D EG W+ Q LWW DI GK + RL D G A G R G ALRE GG LV+A E GF DP +G + + AG L N R NDGR CD GRFL G +N+ +W RL+ K V R+ NG FSPDG+ MY +++P +K+ +DY+ DTG +N+R+F+E G PDGA VD +GC W A + V RF+PEG++ RTI +P ++ T C A GGPDL L+IT+A G+ ++ +P AG VF + GV+G+PEP F+G
Sbjct: 5 AELLLDARDETGEGPVWDGKAQALWWTDIPGKRLHRL------DPSSGAHRIFAMPG-----RVGCFALREAGG--------LVLAMEQGFATFDPESGAVEILSEPEAG-------LANHRFNDGR----------------CDPAGRFLAGSMNMAKAAVSGQLW-------RLDPDKAVTRVAGGVTIA--NGLAFSPDGKRMYWSDSPAEKVYVFDYDLDTGTPSNQRLFLEKGPAPGRPDGAAVDADGCYWSARWVGNAVVRFTPEGKIDRTIKLPVSRVTMC-AFGGPDLRTLYITTACEGMTAEELAAEPLAGGVF-VAEPGVQGLPEPSFQG 291
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A6I6B2P7_9GAMM (SGL domain-containing protein n=3 Tax=unclassified Pantoea TaxID=2630326 RepID=A0A6I6B2P7_9GAMM) HSP 1 Score: 192 bits (489), Expect = 3.260e-52 Identity = 120/340 (35.29%), Postives = 175/340 (51.47%), Query Frame = 1
Query: 271 TEGAVLLVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEE--GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRF 1284
TE +++D +L E + W+ +LWW +I+ + + +C + G ++ + +Q R G++AL EG G + +A E GF + D +TG A D +P+TRLNDGR D GRFLCGG++ + P + P + ++R E V LP C N C+SPDG+ +Y T+ P I Y YNPDTG++ R+F +L E G DG+ VD EG +W A + + R+SP+G + R + +P N TC+ GGP D+LFITSA GL + QR +QP AG+VFA R GV+G E RF
Sbjct: 4 TESPQVILDCQNVLGESILWDDRTNQLWWTNIHAREV---WCWAP-------GQQISPRIYAMQQRVGAIALCEGPG--------IALALEKGFGMMDTATG------AVEWCADVESAVPDTRLNDGR----------------VDPAGRFLCGGMH----EGSPQL--PHSALWRWEGNNQVSLCLP--HVSCANSLCWSPDGKTLYFTDMPEGTINAYPYNPDTGEVGEPRLFADLAEQPGLADGSVVDEEGYLWNAQWGGARIVRYSPDGAIDRIVSLP-IDNPTCLTFGGPQRDVLFITSAWWGLTEDQRQQQPFAGSVFAFR-PGVRGQREHRF 293
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A504LID3_9HYPH (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Mesorhizobium sp. CU2 TaxID=2589985 RepID=A0A504LID3_9HYPH) HSP 1 Score: 192 bits (488), Expect = 4.030e-52 Identity = 116/337 (34.42%), Postives = 173/337 (51.34%), Query Frame = 1
Query: 286 LLVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEEGY--PDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
+LVD +L E W+ E+ L+W+D GK I R E + WDV + GS+ALR GG +++ E GF D +TG A+ D + TRLNDG+ DRQGRF+ G ++++ + P+ ++R++ + ++ +E C NG C+S DG+ Y +T +I YDYN DTG I+NKR F EG PDGAT+D EG +W A+ GE+RRF+P+G L R + +P +N T + GGP+LD+L++TSA+ + + G++F IR GV+G+PE RF G
Sbjct: 6 VLVDCRTILGESPIWDVDEERLYWIDSFGKRIYRSTITGTE-----------LKTWDVPGKIGSMALRARGG--------AILSLESGFHAFDLATG------KASPIADPEADVATTRLNDGK----------------VDRQGRFVAGSMDMDEAN-------PKGSLYRVDVDLSIHKL--EEGIVCSNGPCWSVDGKTFYFADTWADEICAYDYNTDTGSISNKRPFASFREGVGAPDGATIDEEGFLWSAVAYGGELRRFAPDGSLDRRVEMP-VRNVTSLMFGGPNLDVLYVTSAATSPLARFPDDGRLGGSLFEIRGLGVRGVPERRFLG 291
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A2E5KSK1_9PROT (Calcium-binding protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E5KSK1_9PROT) HSP 1 Score: 192 bits (487), Expect = 5.580e-52 Identity = 119/329 (36.17%), Postives = 168/329 (51.06%), Query Frame = 1
Query: 310 LAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELE--EGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
L EG W+ +Q L+WVD N I RL K+ E W V + GS+ALRE GG V+A + GF D +G +D TR NDG+ DRQGRFL G +++ ++ R ++RL+ + ++ E NG CFSPDG Y ++P + I YDY+ TG+++N R F++LE + +PDGATVD+EGC+W A+ + G+V RFSPEG L+ + VP A + + V GGPDLD+LF+TS + Q + E P G ++AI V G+PEPRF G
Sbjct: 15 LGEGPLWDPRDQVLYWVDSNECRIRRLDPKTGE-----------VVNWLVAEQIGSMALREAGG--------AVIALKSGFHFFDFESGTATPIINPEPGEDR------TRFNDGK----------------VDRQGRFLAGSMDMPGLNDS------RGSLYRLDADLSISKLR--ENIGVSNGPCFSPDGGTFYFADSPRRMIWAYDYDVATGEVSNMRTFIDLEPLDAFPDGATVDSEGCLWSALVTKGQVGRFSPEGALMHIVDVP-ADHPSSVMFGGPDLDVLFVTS--IWEWRQVKTENPADGCLYAIHGLEVTGLPEPRFAG 291
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: A0A5J6N2H8_9PROT (Regucalcin n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6N2H8_9PROT) HSP 1 Score: 189 bits (479), Expect = 7.320e-51 Identity = 117/337 (34.72%), Postives = 172/337 (51.04%), Query Frame = 1
Query: 286 LLVDGAYMLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEE--GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
+LVD +L EG W+ EQ L+W+D G + R + E + WDV + GS+ALR GG V++ + GF D TG D P TR+NDG+ D++GRF+ G +++ P ++RL+ V ++ ++ C NG C+SPDG+ Y ++ + I+ YDY+ +TG +NKR F ++ G PDGATVD EG VW+A+ GE+RR++P+G L RTI +P K T V GGP+LDIL++TS + + + P G++FAI GVKG+PEPRF G
Sbjct: 5 VLVDCKTILGEGPLWDVEEQRLYWIDSFGNKVWRATPEGKE-----------IQTWDVPAKIGSMALRRKGG--------AVLSLQTGFHFLDFKTGKTELI------HDPEPDKPTTRINDGK----------------VDKKGRFIAGSMDMMESG-------PIGALYRLDPDLSVHKL--EDGIICSNGPCWSPDGKTFYFADSWSEAISVYDYDLETGTPSNKRTFCSVKGTGGAPDGATVDAEGYVWMALVYAGEIRRYAPDGRLDRTIKMPVLK-VTSVNFGGPNLDILYVTSMAKPPLPRFPEDGPLGGSLFAITGLGVKGVPEPRFAG 290
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Match: UPI001CFFF387 (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Oceaniglobus trochenteri TaxID=2763260 RepID=UPI001CFFF387) HSP 1 Score: 189 bits (479), Expect = 7.530e-51 Identity = 123/333 (36.94%), Postives = 162/333 (48.65%), Query Frame = 1
Query: 307 MLAEGLSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGGRGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAKDEYEQLPNTRLNDGRQEGRRGGAARVTFVSVCDRQGRFLCGGINLENIDQPPDVWK--PRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRAMYATETPLQKIARYDYNPDTGDITNKRVFVELEE---GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1290
+L EG W+H + LW++D GK + R C ++ G + A W V + GS+ALRE GG +VA EDGF D +G D P RLNDG+ D GRFLCG ++ D +W+ P V RLE+G I+ C NG CFSPDG +Y ++ I+ +DY+P TGD TN+R F ++ G PDGATVD EGCVW A G V RF+P+G + R I +P + T +A GG DL LF+TS + + + P GA F I GV G PEPRF G
Sbjct: 12 LLGEGPIWDHDRERLWFIDSLGKRVFR--CTAE-------GGEMRA--WTVPSAIGSMALRENGG--------AIVALEDGFHALDLDSG------ETRPIIDPEPDRPGNRLNDGK----------------VDPAGRFLCGSMDKGETDPTGTLWRLDPDLSVHRLEDG-----II------CSNGPCFSPDGTTLYFADSFSGTISAFDYDPATGDATNRRSFAQMPAVRGGAPDGATVDAEGCVWSACVFDGRVFRFAPDGTVDRVIEMP-VRKITSLAFGGHDLTTLFVTSMAEPPLPKYPGDGPQRGATFRIDGLGVAGRPEPRFAG 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17732.1 >prot_Ecto-sp6_S_contig86.17732.1 ID=prot_Ecto-sp6_S_contig86.17732.1|Name=mRNA_Ecto-sp6_S_contig86.17732.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=394bp MASSKASVLVVAAATAAFAVAYAIARPRKLKRRNDVTGRLQNLVWHKPLSback to top mRNA from alignment at Ecto-sp6_S_contig86:209988..222514- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17732.1 ID=mRNA_Ecto-sp6_S_contig86.17732.1|Name=mRNA_Ecto-sp6_S_contig86.17732.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12527bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:209988..222514- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:209988..222514- >mRNA_Ecto-sp6_S_contig86.17732.1 ID=mRNA_Ecto-sp6_S_contig86.17732.1|Name=mRNA_Ecto-sp6_S_contig86.17732.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1182bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:209988..222514- (Ectocarpus species6 EcLAC_371)back to top |