mRNA_Ecto-sp6_S_contig86.17731.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: D7G4J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J2_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 3.600e-14 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 208 KRKRATMGKGRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQL 378
K +R M KGRWT QEH+DFL GLE+YGK W+AIA +VKTRTT+QTRTHH KY +Q+
Sbjct: 41 KNRRTAMVKGRWTSQEHADFLVGLEKYGKDWKAIADVVKTRTTVQTRTHHQKYEKQV 97
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A6H5JAU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU8_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 8.910e-14 Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 226 MGKGRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQL 378
MGKGRWT QEH+DFL GLE+YGK W+AIA +VKTRTT+QTRTHH KY +Q+
Sbjct: 1 MGKGRWTSQEHADFLAGLEKYGKDWKAIADVVKTRTTVQTRTHHQKYDKQV 51
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A7S3PLT1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLT1_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 3.380e-8 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 220 ATMGKGRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQL 378
+ + GRWT++EH+ FL GLE YGK+W+ IA L+KTR+ +Q RTH KY +++
Sbjct: 22 SNINTGRWTREEHNMFLHGLETYGKEWKKIADLIKTRSVVQIRTHAQKYFQKV 74
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: W4GSI8_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSI8_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.740e-8 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 196 SSTNKRKRATMGKGRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQLWQRERE 396
SS+ R +A GRW+ EH FL G+E YGK WR IA+LV+TRTT+QTR+H K+ +++ + RE
Sbjct: 28 SSSTIRVKAPPNGGRWSDHEHKLFLQGIELYGKDWRRIARLVQTRTTVQTRSHAQKHFDRMEKERRE 94
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A485KWE4_9STRA (Aste57867_12755 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWE4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 9.780e-8 Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 193 ASSTNKRKRATMGKGRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQLWQRERE 396
A++T R + GRW+ EH FL G+E YGK WR IA+LV+TRTT+QTR+H K+ ++L + +R+
Sbjct: 58 AAATGGRGKTPPNGGRWSDHEHRLFLQGIEMYGKDWRRIARLVQTRTTVQTRSHAQKHFDRLEKEKRD 125
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A024UTJ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTJ0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 9.890e-8 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 235 GRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVE 372
GRWTKQEH FL+GL RYGK W++I+ LV TRT +Q RTH KY++
Sbjct: 149 GRWTKQEHELFLEGLRRYGKSWKSISNLVVTRTLVQIRTHAQKYLQ 194
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A6G0XCS8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCS8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.580e-7 Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 235 GRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQL 378
GRW+ EH FL G+E YGK WR IA+LV+TRTT+QTR+H K+ ++L
Sbjct: 11 GRWSDHEHRLFLQGIEMYGKDWRRIARLVQTRTTVQTRSHAQKHFDRL 58
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A7S2FCS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCS8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.600e-7 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 235 GRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVEQL 378
GRWT +EH+ FLDGL+ +GK W+ IAK++KTRT +Q RTH KY ++L
Sbjct: 125 GRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKL 172
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: A0A3R6VZ33_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VZ33_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.600e-7 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 235 GRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYVE 372
GRWTKQEH FL+GL RYGK W++I+ LV TRT +Q RTH KY++
Sbjct: 139 GRWTKQEHELFLEGLRRYGKSWKSISNLVVTRTLVQIRTHAQKYLQ 184
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Match: M4BP50_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BP50_HYAAE) HSP 1 Score: 63.5 bits (153), Expect = 2.280e-7 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 235 GRWTKQEHSDFLDGLERYGKQWRAIAKLVKTRTTLQTRTHHGKYV 369
GRWTKQEH+ FL+GL+R+G+ W+ IA LV +RT +Q RTH KY+
Sbjct: 43 GRWTKQEHAMFLEGLQRFGRSWKKIASLVHSRTLVQIRTHAQKYL 87 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17731.1 >prot_Ecto-sp6_S_contig86.17731.1 ID=prot_Ecto-sp6_S_contig86.17731.1|Name=mRNA_Ecto-sp6_S_contig86.17731.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=116bp MASLSTSGTTEEERDLPKAAVGGASSSSNNNCSSNGSNNGSRDASSTNKRback to top mRNA from alignment at Ecto-sp6_S_contig86:209988..214670+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17731.1 ID=mRNA_Ecto-sp6_S_contig86.17731.1|Name=mRNA_Ecto-sp6_S_contig86.17731.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4683bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:209988..214670+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:209988..214670+ >mRNA_Ecto-sp6_S_contig86.17731.1 ID=mRNA_Ecto-sp6_S_contig86.17731.1|Name=mRNA_Ecto-sp6_S_contig86.17731.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:209988..214670+ (Ectocarpus species6 EcLAC_371)back to top |