mRNA_Ecto-sp6_S_contig86.17727.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 610 bits (1573), Expect = 3.010e-215 Identity = 344/350 (98.29%), Postives = 346/350 (98.86%), Query Frame = 1
Query: 1 MGVDVFDLPAGGIPASERGQQEALPPQVLESIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXX-GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEFDKIWRG 1047
MGVDVFDLPAGGIPASERGQQEALPPQVLE IRGRHGLQEFAGGRRLLDPEYYGADGEAGDAAL GSXXXXXXXXXXXXXXXXXXXXX GDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQN HEHAA+VVAEFDKIW+G
Sbjct: 1 MGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALMGSXXXXXXXXXXXXXXXXXXXXXXGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQG 350
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 596 bits (1536), Expect = 4.140e-206 Identity = 339/354 (95.76%), Postives = 343/354 (96.89%), Query Frame = 1
Query: 1 MGVDVFDLPAGGIPASERGQQEALPPQVLESIRGRHGLQEFAGGRRLLDPEYYGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXG-DGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGS----GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEFDKIWRG 1047
MGVDVFDLPAGGIPASERGQQEALPPQVLE IRGRHGL+EFAGGRRLLDPEY+GADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXG DGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXX GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLAS+GGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRE RYTPTVPKQN HEHAAS VAEFDKIW+G
Sbjct: 223 MGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQG 576
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 265 bits (676), Expect = 2.420e-78 Identity = 138/249 (55.42%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEF 1029
F R+LH +P V+ V DFFT EECD I+RS + G +S T+G D A AQRTSTTWFH ++ VPELMAKA L+G+ + +EE QTVRYR E FTWHLDAL P P+LA +GGQR ATLLVYLT++ E DGGAT FRDLG PL+VRP+KGSALLFFP+ GG P P D+RTLH GE V AEQDKWIAQLWLRE+ YTPT P NSH A+S ++++
Sbjct: 235 FSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIG------QSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGIN-DISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.490e-78 Identity = 127/249 (51.00%), Postives = 167/249 (67.07%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEF 1029
F R+LH +P V+ V DF T +ECD ++ + +P + +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE V +E DKWIAQLWLRE++YTPT P N+H A ++++
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMK------------IGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 257 bits (656), Expect = 8.400e-78 Identity = 131/248 (52.82%), Postives = 163/248 (65.73%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAE 1026
F R+LH +P ++ + DF T ECD YIS + +P + +S T+G D+ + +QRTSTTWFH + + LMAKAS L+G+ E RWEE QTVRYR EKFTWHLDAL P+ +L GGQR+ATLLVYL ++P+G GG+T FRDLG PL+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGE V ++ DKWIAQLWLRE YTPT P NSHE A V+E
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKNANTAPM------------EIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIE-RWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 257 bits (657), Expect = 5.250e-77 Identity = 127/249 (51.00%), Postives = 167/249 (67.07%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLG-----PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEF 1029
F R+LH +P V+ V DF T +ECD ++ + +P + +S T+G D+ + +QRTSTTWFH + +P+LMAKAS L+G+ + RWEE QTVRYR EKFTWHLDAL P+ +LA GGQR+ATL+VYL ++PEG GG+T FRDLG PL+V P+KGSAL+FFP+ GG P+ PFDIRTLHAGE V +E DKWIAQLWLRE++YTPT P N+H A ++++
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMK------------IGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNID-RWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.260e-76 Identity = 136/249 (54.62%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGP-----LRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEF 1029
F R+LH +P VI V DFFT EECD+YI+ +S P M RS T+G D A +QRTSTTWFH + VPELMAK+S L G+ + G +EE QTVRY+P +KFTWHLDAL P + S+GGQR ATLLVYLT++ DGGAT FRDLGP L+V+P+KGSALLFFP+ GG P+ PFDIRTLHAGEVV + DKWIAQLWLRE Y PTVP +N H A ++++
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIA--MSDPTAGNKDGDAV-------------MTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLD-DIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKSDKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 255 bits (651), Expect = 9.720e-75 Identity = 134/252 (53.17%), Postives = 164/252 (65.08%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLA---SRGGQRIATLLVYLTEMPEGDGGATAFRDLG---PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEFDK 1035
F R+LH +P VI V DFFT EECD+Y+ S+ + +S T+G D + AQRTSTTWFH ++ VPELMA+A+ L+G+P R+EE QTVRYR EKFTWHLDAL +PD+A S GQR++TLLVYLT++ +GGAT FRDLG PL+VRP+KGSALLFFPS GG PDCPFDIRTLH GE V A +KWIAQLWLR+ YTPT P + H A + E+ K
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLL---------LGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLP-GISRFEEPQTVRYRRSEKFTWHLDAL--SPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 250 bits (639), Expect = 4.180e-73 Identity = 136/257 (52.92%), Postives = 162/257 (63.04%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQ-RSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEG--RWEEAQTVRYRPGEKFTWHLDALPPAP-DLASRGGQRIATLLVYLTEMPEGDGGATAFRDLG---------PLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESRYTPTVPKQNSHEHAASVVAEF 1029
F R+LH +P V+ + DFFT+EECD+Y+ S+ P + +S T+G D + AQRTSTTWFH + VPELMAKAS L+G+ EG R+EE QTVRYR EKFTWHLDAL P + S GQRIATLLVYLT++P G GGAT FRDLG PL+VRP+KGSALLFFPS GG P PFDIRTLH GE V AE +KWIAQLWLR+ Y PT P NSH A+ + +
Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGL---EGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEAVAEDAENEKWIAQLWLRQRGYEPTAPVGNSHGDASDEIGRY 457
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Match: A0A7S3Q2Q4_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Q4_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.210e-72 Identity = 129/252 (51.19%), Postives = 159/252 (63.10%), Query Frame = 1
Query: 298 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGP-------LRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAEQDKWIAQLWLRESR-YTPTVPKQNSHEHAASVVAEF 1029
F R+L+ +P V+ + DF ++EECDEY++ +P P RS T+G D + +QRTSTTWFH F VP LMAKAS L+G+ + RWEE QTVRY+ EKFTWHLDAL P GGQR+ATLLVYL ++ E +GGAT FRDLG LRV+P+KGSALLFFP+ GG P+ PFDIRTLHAGE + AE DKWIAQ WLRE+ YTP+ P N+H A + EF
Sbjct: 257 FTQFRILNVDPMVLAIDDFMSEEECDEYVNLCANPKILTESN-------------DAPMESRSKTMGKDSKSKSQRTSTTWFHHFKGVPALMAKASRLLGLKSID-RWEEPQTVRYQQTEKFTWHLDALAPGDSEPEIGGQRVATLLVYLNDIGENNGGATCFRDLGDNFDDGDYLRVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEALSASAESDKWIAQCWLRENNNYTPSAPSGNTHVAATKAIGEF 494 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17727.1 >prot_Ecto-sp6_S_contig86.17727.1 ID=prot_Ecto-sp6_S_contig86.17727.1|Name=mRNA_Ecto-sp6_S_contig86.17727.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=350bp MGVDVFDLPAGGIPASERGQQEALPPQVLESIRGRHGLQEFAGGRRLLDPback to top mRNA from alignment at Ecto-sp6_S_contig86:175249..179044+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17727.1 ID=mRNA_Ecto-sp6_S_contig86.17727.1|Name=mRNA_Ecto-sp6_S_contig86.17727.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3796bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:175249..179044+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:175249..179044+ >mRNA_Ecto-sp6_S_contig86.17727.1 ID=mRNA_Ecto-sp6_S_contig86.17727.1|Name=mRNA_Ecto-sp6_S_contig86.17727.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1050bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:175249..179044+ (Ectocarpus species6 EcLAC_371)back to top |