mRNA_Ecto-sp6_S_contig86.17721.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: D7G1I4_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I4_ECTSI) HSP 1 Score: 827 bits (2136), Expect = 9.640e-293 Identity = 468/471 (99.36%), Postives = 468/471 (99.36%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGSGGGGTGTSNGHMDPKLAALLGAAAAKQRSQPVTTGDH 1413
GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDL QNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGSGGGGTG SNGHMDPKLAALLGAAAAKQRSQPVT GDH
Sbjct: 2 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLEQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGSGGGGTGNSNGHMDPKLAALLGAAAAKQRSQPVTPGDH 472
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: D7G1I5_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I5_ECTSI) HSP 1 Score: 665 bits (1717), Expect = 7.390e-230 Identity = 391/448 (87.28%), Postives = 404/448 (90.18%), Query Frame = 1
Query: 64 MVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGSGGGGTGTSNGHMDPKLAALLGAAAAKQRSQPVTTG 1407
MVIG+CAFQKWFIE VEILSLELITL+VKSVEAETVRGVRVTVSGTCQVKVDAFT DL+QNLPQITLACQHFLGKT DQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHI+EDLNNMGFALVSYTVNQVLDS GYMEALGATQTALVKREAAEGESKN+SEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA XXXXXXXXXXXXX ELRGD+FQHFGNAA+VQSIVD+LPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVG+ILAQLPETVEALTGVDITKGL+R +G GG + A G AA K P +TG
Sbjct: 1 MVIGECAFQKWFIESVEILSLELITLSVKSVEAETVRGVRVTVSGTCQVKVDAFTHDDLSQNLPQITLACQHFLGKTSDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNMSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAXXXXXXXXXXXXXXXXXXXXXXXXXXXELRGDAFQHFGNAAVVQSIVDKLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGNILAQLPETVEALTGVDITKGLERYLGGGG----------QERSAGSNGPAAGKGSPLPRSTG 438
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A7S1DX43_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DX43_HEMAN) HSP 1 Score: 345 bits (886), Expect = 1.840e-104 Identity = 210/441 (47.62%), Postives = 286/441 (64.85%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFT------QQDLAQN-----------LPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDI 1272
GN + T P+QVAVISGP +RM+IG C FQ IE LSLEL+TL +KS +AET++GVRV Q+KV A + AQ+ P ITLA HFLG+++D++ QA+LRT+EGHQRQILGTLTVEE+YKDRAAFS+RVRE + +DL MGF LVSYTV + D GYME+LGATQT LVKREAAEG ++N +EA+K+VA+ ++ A +A A EAH+ V + DRDL IK+AA++ +VN A A A A IEK RQ Q +VR EA V L++ + +K+ EG S A L+ EKNKAEA+R A A+A +I +G + VLE + ++++ +G+AA+VQ IVD+LP++A +A PL T +MVF++ +G A S +T D+ ++++Q+P TV+ LTGVDI
Sbjct: 48 GNIVTTTPNQVAVISGPRGTRMIIGGCGFQLLCIETCHYLSLELMTLEIKSHKAETIKGVRVNCGSVAQIKVKALMGSTTSGEGPAAQHGTVRVSNTEYDYPSITLASTHFLGESDDRIRQAILRTMEGHQRQILGTLTVEEIYKDRAAFSERVRELVHDDLKAMGFELVSYTVTHIDDENGYMESLGATQTELVKREAAEGRARNQAEARKKVAQYDADAEIATAEAAREAHIAVNQQQXXXXXXDRDLHIKQAAFETQVNKARAEAEAAGKIEKERQQQNIVRXXXXXXXXEAQVHLEITDRQVERTKKEAEGQSLAELLAEKNKAEAVRVNAQAQADQIRMIGEAEAAAKQAAGAAEAHVLEQKAEAWKEYGDAALVQLIVDKLPELASAMAEPLKNTKEMVFVSNDGKAASS-MTGDIATMMSQVPATVKGLTGVDI 487
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A7R9SVU7_9CHLO (Flotillin-like n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVU7_9CHLO) HSP 1 Score: 328 bits (840), Expect = 4.560e-99 Identity = 202/431 (46.87%), Postives = 294/431 (68.21%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRM 1293
GN ++ P++ +ISG R++IGQC + E+V L+LE++TL ++S AE+ +GV+++++ QVKV A ++ + LA HF+GKT++ + A+ RTLEGHQRQI+GTLTVEE+YKDRAAFS+RVREH+ EDL ++G L SYTV + D GYM+ALGAT T+ VKREA EG ++NV+EAKK V+ + A +AEA AH A++ + A ADRDL +K++ Y +EVN A A A IE+A Q + V+RE T+Q+ EEA V+L V + + + G S+A L+E++N A++I A+A+A I ++G XXXXXXXXXXXXX +++ +G AA++QS+V++LP IA +A PL KT+KM+FI+ + G AGS+LT+D+ I+A+LP+TVEAL+GVDI K R+
Sbjct: 2 GNIVVAGPNKAKIISGARGGRILIGQCGLALFCCEQVGSLNLEIMTLILQSENAESAKGVKISITAVAQVKVTAMDASSGEVDINSVRLAASHFMGKTDEDIEDAIKRTLEGHQRQIIGTLTVEEIYKDRAAFSERVREHVVEDLKSLGITLASYTVTNIGDENGYMDALGATATSAVKREAEEGTARNVAEAKKVVSRTMADAAVAEAEAMKMAHNAKALQGQAMAEADRDLELKRSRYASEVNKAREEAEAATRIERAIQNKAVIRETTQQQVEEAQVLLLVTEQQVARQKAELAGASEAKLLEQRNIAKSIEVAAEAEAGRIRRLGXXXXXXXXXXXXXXXXXXXXXXQAYKEYGTAALIQSVVEQLPAIASAVAEPLGKTEKMIFIS-QDGSAGSQLTKDITRIMAELPDTVEALSGVDIKKAFKRL 431
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A7S2S6C3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C3_9STRA) HSP 1 Score: 326 bits (836), Expect = 2.090e-98 Identity = 212/444 (47.75%), Postives = 293/444 (65.99%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQ----------NLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGS 1302
GN + P++ + SG + + +G+ F+ W ++VE+LSLEL+T+ ++SV+AET +GVRV V QVKV AF D + + I LA QHFLG +ED + +L RTLEGHQRQILGTLTVEELYK+R+AFS +VREH+ EDL+ MG+ L SY V ++ D YM++LG TQTA+VKREAAEGE+KN +EA+K+VA ++ A+ AEA AH+ V ++ E+ AA+DRDL +KKA Y EVN A A A A IE ARQ Q +VRE+TKQ E + L++ +K+ EG S A L++++N+A++I A A+ XXXXXXXXXXXXX D+++H+G AAI Q +V++LP+IA I+ PL+KT+KMVFI+ +G A S LT+D +IL Q+P V+ LTG D+TK D M G+
Sbjct: 2 GNFVTCAPNKAIIKSGYSGTTVAVGKTVFKFWICQQVELLSLELMTIEIESVQAETAKGVRVNVRAVAQVKVKAFHLDDNGKRSENSGKAECDTGSIILAAQHFLGDSEDAIRDSLRRTLEGHQRQILGTLTVEELYKNRSAFSTKVREHVLEDLSAMGYGLASYVVQKIDDDSEYMQSLGVTQTAIVKREAAEGEAKNTAEARKKVAVYKAEADTAEAIEFQRAHLAVNLQKEQEAASDRDLNLKKAMYDREVNQARAEATAAGPIEDARQQQHIVRERTKQEQVEQGIKLEIADQIVERTKKEMEGASMARLLQQQNEAKSITVIAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAYKHYGQAAITQMVVEKLPEIAENISKPLSKTEKMVFISNDGNSA-SALTRDTVNILGQMPHMVKDLTGFDMTKMADNMSGN 444
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A7S3LS19_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LS19_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.540e-92 Identity = 210/444 (47.30%), Postives = 284/444 (63.96%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFT---QQDLAQ-----------------NLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDI 1272
GN + P++ A++SG +R+ +G+ F+ W +E+V+ LSLEL T+ +KS +AET RGVRV +S QVKVDA+ +Q L N +I LA QHFLG T + + L RTLEGHQRQILGTLTVEELYKDR AFS VR+H+ +DL +MGF LVSYTVN + D+ YM +LG TQTA+VKREAAEG+++N SEAKK+VAE + A +AEA EAHV VA + KKA+++ EVN A A A A IE ARQGQ V+RE+T+Q E + LD+ +K+KEG++ A + + +KA+A+R A A+ XXXXXXXXXXXXX +++H+G AA VQ ++++LP+IA ++A PL T+KMVF++ +G AGS+LT D+ +L QLP+ VE LTG DI
Sbjct: 2 GNFVSASPNEAAILSGRSGTRIFVGKTGFRFWIVEKVDRLSLELYTIHIKSHDAETCRGVRVNISSIAQVKVDAWKDIHEQPLDADGRSIHAKKGRSSAGDLNNTKIKLAAQHFLGGTNESIVDCLQRTLEGHQRQILGTLTVEELYKDRQAFSASVRDHVFDDLASMGFKLVSYTVNDISDNSDYMLSLGITQTAIVKREAAEGKARNESEAKKKVAEYTAQARIAEAHALREAHVVVAQQXXXXXXXXXXXXXKKASFEREVNQARAEAEAAGPIESARQGQAVIREKTRQIEAEEKIKLDIADQTIAREKKEKEGMAFADKLAQTHKADAVRILAQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYKHYGQAATVQMVIEKLPEIAAKMADPLKNTEKMVFVSSDGS-AGSQLTGDITRMLGQLPDVVEGLTGFDI 444
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A835YT26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT26_9STRA) HSP 1 Score: 310 bits (795), Expect = 2.500e-92 Identity = 208/400 (52.00%), Postives = 268/400 (67.00%), Query Frame = 1
Query: 109 VEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFT----QQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMV 1296
VE L L+L+TL VKS EAETVRGVRV+V+ CQVKVDA+ ++ N ++LACQHFLG++++ + ++L TLEGHQRQILGTLTVEELYKDRAAFS+RVREH+ D++ +GF LVSYTV ++ D GYM ALGATQTALV REAAEG++KN EA K V+ ++S AEA RA +A A A +IE ARQ Q VV+EQ QR EA +L+ + EAL +QK+ EG S A L+ + NKA+ +R KA A+A + VG XXXXXXXXXXXXX R D++ FG AAI I+D+LP+IA+ IAAPLAKTDKM+F++ +G AGS+LT D+ +++AQL V+ LTGVDIT+GL R+V
Sbjct: 5 VETLDLDLLTLEVKSKEAETVRGVRVSVNSICQVKVDAYEPVEGHEERVLNKKAVSLACQHFLGRSKEDIKMSILSTLEGHQRQILGTLTVEELYKDRAAFSERVREHVFADISAIGFVLVSYTVTKISDQDGYMIALGATQTALVMREAAEGKAKNDMEASKAVSLSQSLGTTAEAENRAXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXQAKAEAARNIEAARQQQQVVKEQAMQRVIEAKTLLEYEDNEALRLQKKAEGESLAQLMADDNKAKGVRIKAAAEADRVRDVGXXXXXXXXXXXXXXXXXXXXRADAYAAFGQAAITSQIIDKLPEIAKAIAAPLAKTDKMIFVSSDGA-AGSKLTSDITTMMAQLGPAVQGLTGVDITQGLQRLV 398
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A5B8MGZ2_9CHLO (Flotillin-like n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGZ2_9CHLO) HSP 1 Score: 304 bits (778), Expect = 1.930e-90 Identity = 188/433 (43.42%), Postives = 276/433 (63.74%), Query Frame = 1
Query: 1 GNCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVG 1299
GN ++ PP++ ++SG R++IG+C F + IE LSLE+IT+TV S++AETV+GV++ + QVKV + +L N I LA +FL E + AL +TLEGHQRQI+GTLTVEELYKDRAAFS+RV EH+ +DL +GF L SYTV ++ D+ GYM ALG TQTA+V REAAEG ++N +E++K +A+ + A++ A A++ ++E +A ADR L ++KA K EVN A+A AA A DIE A+Q Q +V Q Q+ E VML V+ E +Q+Q ++ +AEA+ +A+A + +G ++VL+ R + ++ FG+ AIVQ++V+ LP +AREIA PL KT+KM+F++ +G A S L++D+ AQLP+ VE+LTG+D+ K L R+ G
Sbjct: 2 GNIVVAPPNKAVIVSGYRGQRILIGKCGFALYCIEEAHSLSLEIITITVNSIDAETVKGVKINLKSFAQVKVKSTKDGNLDIN--SIKLAATNFLSAREQDIEDALQKTLEGHQRQIVGTLTVEELYKDRAAFSERVYEHVVDDLERLGFELASYTVAEISDNNGYMAALGRTQTAIVAREAAEGTARNQAESRKTLAKANADADIVAAENAERAYIRRQKQEEAQAEADRLLDLRKAKNKLEVNMADAAAASAKDIEYAKQKQAIVEAQATQKLREEEVMLKVKDIE---LQQQVNVAAR--------EAEAMTLQAEAIGEKERLIGKAQADIIKMKGDAANEVLQQRAEIYKEFGHDAIVQNVVEMLPSLAREIAQPLGKTEKMIFVSSDGSSA-SNLSKDIIKAAAQLPDAVESLTGLDLKKALKRLEG 420
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: A0A2R5GCP0_9STRA (Flotillin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCP0_9STRA) HSP 1 Score: 314 bits (804), Expect = 6.250e-90 Identity = 209/433 (48.27%), Postives = 288/433 (66.51%), Query Frame = 1
Query: 22 PSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAF------TQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGS 1302
P++ V SG +++ +G+ F+ W ++V L LEL+T+ + S +AET +GVRV V QVKV A+ T+ +L + I LA QHFLG +EDQ+ AL RTLEGHQRQILGTLTVEELYK+R+AFS++V+EH+ +DL MG+ L SY V QV D+ YM +LG TQTA+VKREAAEG +KN +EA+KRVA ++ A+MAEA AHV V + E A +DRDL +K+AAY EVN A+A A A IE+ARQ Q++VRE T+Q E + L++ +K+KEG S A L+EE+N A++I A A+A ++ XXXXXXXXXXXXX +++ FG AA+VQ IV++LP++A +IA PL+KT+KMVF++ +G A S T DV ++ QLP V LTG D+ + + R+ S
Sbjct: 354 PNEAVVKSGFSGTKVAVGRTTFKLWICQQVARLPLELMTIEINSEQAETAKGVRVRVRAVAQVKVSAWHMSESGTRGELDE--ASILLAAQHFLGDSEDQIASALQRTLEGHQRQILGTLTVEELYKNRSAFSEKVKEHVLDDLRAMGYGLASYVVQQVDDANDYMVSLGVTQTAIVKREAAEGSAKNEAEARKRVAAYKADADMAEAIEFQRAHVAVNQQKEAEAESDRDLHLKRAAYDREVNQAQAEAESAGPIEEARQQQSIVRENTRQLQVEESIKLEIADQIVERTKKEKEGESLARLLEEQNHAKSITVIAKAEADKVRXXXXXXXXXXXXXXXXXXXXXXXXXXAYKQFGEAAVVQMIVEQLPELAAKIAEPLSKTEKMVFVSSDGNAA-SGFTGDVTRMIGQLPNAVHGLTGFDMIEAVKRLADS 783
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Match: C1FEY3_MICCC (Flotillin-like n=2 Tax=Micromonas TaxID=38832 RepID=C1FEY3_MICCC) HSP 1 Score: 291 bits (744), Expect = 3.170e-85 Identity = 199/432 (46.06%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 4 NCIITPPSQVAVISGPGKSRMVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKVDAFTQQDLAQNLPQITLACQHFLGKTEDQVHQALLRTLEGHQRQILGTLTVEELYKDRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVG 1299
N + P+Q ++SG R+VIG CA W +E + L L+L+TL++KSVEAET +GVR+++S T Q+K+ + + + ++ LA HFLGK + A+ RT+EGHQRQ++GTLTVEELYKDRA+FS+RV+E + DL MGFALVSYTV +V D +GY+ ALGATQTA VKREA EG++KN S+A+ + + V A + RDL +K+ ++ EVN A A A A IE A Q Q VV++QT Q+ EEA VML V E + + EG S A LIE+KN AE+ R A+A+A+E Q+G XXXXXXXXXXXXX ++ ++ +V I ++LP IA +AAPL KM F++ +G AGSRLT D+ SI+ QLP+TVEALTGV++ + + R+ G
Sbjct: 3 NIVTAAPNQAVIVSGLRGQRVVIGGCASVMWCVETYDRLYLDLMTLSIKSVEAETAKGVRISLSSTAQIKIMSGDGHKI--DYDKVKLAATHFLGKKRLDIQDAVHRTMEGHQRQVIGTLTVEELYKDRASFSERVKELVDPDLLGMGFALVSYTVTEVDDREGYITALGATQTASVKREAEEGKAKNESQARIXXXXXXXXXXXXXXXXKRTSTVRANEFAASEAESMRDLQMKQQGFQKEVNEATARAEAAIRIETAIQNQKVVKQQTLQKVEEAEVMLQVTEREMERAKAEAEGASGAKLIEQKNNAESRRVAAEAEAYEKQQLGXXXXXXXXXXXXXXXXXXXXXQQAYPNYAEERMVTIITEKLPAIADAVAAPLKNAGKMTFVSSDGS-AGSRLTNDISSIMGQLPDTVEALTGVNLKRVMKRLEG 431 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17721.1 >prot_Ecto-sp6_S_contig86.17721.1 ID=prot_Ecto-sp6_S_contig86.17721.1|Name=mRNA_Ecto-sp6_S_contig86.17721.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=451bp MVIGQCAFQKWFIERVEILSLELITLTVKSVEAETVRGVRVTVSGTCQVKback to top mRNA from alignment at Ecto-sp6_S_contig86:108266..117005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17721.1 ID=mRNA_Ecto-sp6_S_contig86.17721.1|Name=mRNA_Ecto-sp6_S_contig86.17721.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8740bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:108266..117005- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:108266..117005- >mRNA_Ecto-sp6_S_contig86.17721.1 ID=mRNA_Ecto-sp6_S_contig86.17721.1|Name=mRNA_Ecto-sp6_S_contig86.17721.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:108266..117005- (Ectocarpus species6 EcLAC_371)back to top |