mRNA_Ecto-sp6_S_contig86.17719.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig86.17719.1
Unique NamemRNA_Ecto-sp6_S_contig86.17719.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A6H5K3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X8_9PHAE)

HSP 1 Score: 844 bits (2181), Expect = 1.140e-300
Identity = 573/701 (81.74%), Postives = 586/701 (83.59%), Query Frame = 3 
Query:    6 MATPRKGGTGDEQGDDVPIARVVHRLDDDRNRKDDDVAVVVGQLVPAPTATAYAVSATSRTTPDNTLWAGTARGPSSSSSYAAPVMHNSTGSFSVAGTSTSXXXXXXXXXXXXXXXXXXXXXXXXXDXXGVSAAAXXXAGGEGTYMPVMTHTGTKNVPGCGTASSTGGRRFGEGAPATTXXXXXXXXXXXXXXXXXXXGSLPMKDGDYVDDGGPVLVACGQGKSMYNVKGCMSSWVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSSQSWALRSEDNPAGDGGVMCSACVPSIASGQASGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAAAAAEAXXXXXXSDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXXWSLASSVAPAHGSSEFVTCXXXXXXXXXXXGGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAAD----PSSLSEAFSSVMSVAEREGGLQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE 2096
            MATPRKGGTGDEQG+DVPIARVV R DDDR+R+DDDVAVV+GQLVPAP   AYAVSATSR TPD T WA T+RGPSSS SYAAPVMHNSTGSFSVAGTSTS  XXXXXX           XXXXXX     SA+A   AGGEGTYMPVMTHTG  NVPGCG ASSTGGRRFGEGAPATT                   GSLPMKDGDYV DGGPVLVACGQGKSMY VKGC+SSWVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPS+QSWALRSEDNPAGDGGVMCSACVPSIASGQ+SGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAA     XXXXXX                                    XXXXXXXXXXXXXXWSLASSVA AHGSSEFVT XXXXXXXXXX  GWVATGGTDWSVRLWDVVKSRELGRLSFMGHSH VRSLACSSDG  LVSGGDDHKVIVWSPQSRR +ATLKSHASAVHG+AVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAA     PSSLS AFSS +SV EREG LQGGLAGARSRGESGRWEGET GATMLNAVNCLAAGGAGS GDWLFAAGETVVRSWRRRDG+WHGGAGLPGEGLGGIASLSVIE
Sbjct:    1 MATPRKGGTGDEQGNDVPIARVVDRPDDDRSRRDDDVAVVIGQLVPAPALPAYAVSATSRATPDRTPWAATSRGPSSSPSYAAPVMHNSTGSFSVAGTSTSGGXXXXXXRRGSSGGPVAGXXXXXXXVEEDSASAAA-AGGEGTYMPVMTHTGMHNVPGCGIASSTGGRRFGEGAPATTAAARGAPFALEGGG-----GSLPMKDGDYVADGGPVLVACGQGKSMYKVKGCISSWVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSNQSWALRSEDNPAGDGGVMCSACVPSIASGQSSGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAAXXXXXXXXXXXXXXXXXX------------------------XXXXXXXXXXXXXXXXXXXWSLASSVATAHGSSEFVTXXXXXXXXXXXAAGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHQVRSLACSSDGNLLVSGGDDHKVIVWSPQSRRVVATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAASAAAAPSSLSGAFSSGVSVVEREGSLQGGLAGARSRGESGRWEGETAGATMLNAVNCLAAGGAGSCGDWLFAAGETVVRSWRRRDGIWHGGAGLPGEGLGGIASLSVIE 671
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: D7G1I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I6_ECTSI)

HSP 1 Score: 694 bits (1792), Expect = 5.200e-244
Identity = 433/565 (76.64%), Postives = 436/565 (77.17%), Query Frame = 3 
Query:  441 MPVMTHTGTKNVPGCGTASSTGGRRFGEGAPATTXXXXXXXXXXXXXXXXXXXGSLPMKDGDYVDDGGPVLVACGQGKSMYNVKGCMSSWVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSSQSWALRSEDNPAGDGGVMCSACVPSIASG-------------QASGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAAAAAEAXXXXXXSDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXXWSLASSVAPAHGSSEFVTCXXXXXXXXXXXGGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAADPSSLSEAFSSVMSVAEREGGLQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE 2096
            MPVMTHTGTKNVPGCGTASSTGGRRFGEGAPATTXXXXXXXXXXXXXXXXXXXGSLPMKDGDYV DGGPVLVACGQGKSMYNVKGCMSSWVLVG                                             G GG    A    +A+              QASGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWIS                             HKS AAAAEA      SDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXX                   XXXXXXXXXXXGGWVATGGTDWSVRLWDVVK RELGRLSFMGHSHPVRSLACSSDGK LVSGGDDHKVIVWSPQSRRPLATLKSHASAVHG+AVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVA LRGEV AADPSSLSEAFSS MSVAEREGGLQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE
Sbjct:    1 MPVMTHTGTKNVPGCGTASSTGGRRFGEGAPATTXXXXXXXXXXXXXXXXXXXGSLPMKDGDYVADGGPVLVACGQGKSMYNVKGCMSSWVLVG---------------------------------------------GGGGEQPDAVKEKMATXXXXXXXXXXXXXXQASGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISCCALVPSATAGVAPSVAVSGGRDASVRFWHKSDAAAAEAAAARAASDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGWVATGGTDWSVRLWDVVKFRELGRLSFMGHSHPVRSLACSSDGKLLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVAILRGEVTAADPSSLSEAFSSGMSVAEREGGLQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE 520
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A1Y2EVM9_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EVM9_9BASI)

HSP 1 Score: 70.5 bits (171), Expect = 9.820e-9
Identity = 36/106 (33.96%), Postives = 52/106 (49.06%), Query Frame = 3 
Query: 1407 WVATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVW 1724
            WVA+GG D  +RLWDV + R    L        V SLA +  G  L +G  +  V VW P+SRR +A L  H   V G+ +      G+  +W+ S   +  + +W
Sbjct:  304 WVASGGFDRKIRLWDVGEGRASSVLELPSPPASVYSLATTPSGSLLAAGTPERVVRVWDPRSRRQVARLSGHTDNVRGVLI------GEEGKWLLSASSDSTVKLW 403
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A524L7R5_THOAR (WD40 repeat domain-containing protein n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A524L7R5_THOAR)

HSP 1 Score: 68.9 bits (167), Expect = 1.100e-8
Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 3 
Query: 1410 VATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGD-DHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVWD 1727
            + +GG D ++RLWD    +EL +  F+GH  PV ++    DGK LVS  D D  V +W  Q    +++L  +++ V  +AV P        R++ +GG +GF  +WD
Sbjct:   36 IISGGQDATIRLWDFASGKELHK--FVGHEGPVYNMVMMQDGKHLVSIADKDLAVKIWDIQKHELVSSLAPNSAHVTAVAVSPDQ------RYLVTGGEDGFARIWD 134
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A2S7QHN2_9HELO (Wd repeat domain-containing protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7QHN2_9HELO)

HSP 1 Score: 63.2 bits (152), Expect = 7.090e-8
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 3 
Query: 1488 MGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTH 1664
            MGH+  + ++A S DGKF+V+GG D K+IVW+ ++ +P+     H  AV GLA   GT+
Sbjct:    1 MGHTDTILTVAASQDGKFVVTGGKDRKIIVWNAETLKPIRVFSQHRDAVTGLAFRRGTN 59
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: UPI00053FFA0A (DENN domain and WD repeat-containing protein SCD1 isoform X1 n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FFA0A)

HSP 1 Score: 67.0 bits (162), Expect = 1.130e-7
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 3 
Query: 1404 GWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATL 1760
            G+  +G TD SVR+WD  +     R +  GH+  VR++  SSD   +VSG DDH ++VW  Q   PL  LK H   +  + +     SGD+   + S   +G + +WD R  G  +AT+
Sbjct:  917 GFFISGSTDCSVRIWDPSRRGSELRATLRGHTGAVRAI--SSDRWKVVSGSDDHSILVWDKQQFIPLEELKGHEGQISCVRM----LSGDS---VLSSSHDGTVKMWDART-GGCIATV 1025
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A2A4K1S8_HELVI (Uncharacterized protein n=7 Tax=Noctuidae TaxID=7100 RepID=A0A2A4K1S8_HELVI)

HSP 1 Score: 65.1 bits (157), Expect = 2.390e-7
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 3 
Query: 1416 TGGTDWSVRLWDVVKSRELGRLSFMGHSH----PVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTH 1664
            TG    SV  W + + R+LG L++  HS+     V+SLA S+DGK+LVS  D   + VW PQ+ + + T K H   V GL     TH
Sbjct:  153 TGSKCGSVIKWGIKEKRKLGTLTYKTHSNFIKGDVKSLAISTDGKYLVSSDDSPFIQVWDPQTLKHVHTFKGHKDIVTGLVFRKNTH 239
[Close]
BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: UPI000A3C1F0E (hypothetical protein n=1 Tax=Lentzea kentuckyensis TaxID=360086 RepID=UPI000A3C1F0E)

HSP 1 Score: 65.5 bits (158), Expect = 3.470e-7
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 3 
Query: 1410 VATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVI-VWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVW--DPRNFGSPVATLRG 1766
            +A+GG+D +VRLWDV   +++G     GH+  VR +A   DG+ L S  D   V+ +W   SR PLA ++   S   G+AV PGT        IA+ G    + +W  DP +  S V ++ G
Sbjct: 1244 LASGGSDRTVRLWDVATRKQIG-AQLTGHNGVVRGVAFLPDGRTLASVSDYDLVLRLWDVPSRTPLAAVRGSGS-FDGIAVQPGTGL------IATAGLNNVVGIWNPDPASVKSQVCSILG 1357
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A5R9FQU6_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces montanus TaxID=2580423 RepID=A0A5R9FQU6_9ACTN)

HSP 1 Score: 65.1 bits (157), Expect = 3.760e-7
Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 3 
Query: 1410 VATGGTDWSVRLWDVVKSRELGRLSFMGHSHPVRSLACSSDG---KFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAAD 1784
            +A  G D++VRLWD+ + R L +     H + VR++A +SDG    +  SG  D  V +W+     P   L      ++ +A++ GT     P ++ASGG +  + +WD R        LRG  AA +
Sbjct:  579 LAISGDDFTVRLWDLDRERPLQQWR---HPYTVRTVAAASDGVSADWFASGSADGTVRLWAATDHAPKKVLYCRQGIINAVAINTGTSP--LPPFLASGGDDRTVRIWDLRTLEPIGEPLRGHTAAVE 701
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BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Match: A0A3E2HRU1_SCYLI (Uncharacterized protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HRU1_SCYLI)

HSP 1 Score: 64.7 bits (156), Expect = 4.160e-7
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 3 
Query: 1464 RELGRLSFMGHSHPVRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDPGTH 1664
            R+    S+ GH+  + ++A S DGKF+V+GG D K+IVW   + RPL     H  AV GLA   GT+
Sbjct:  222 RKAKDTSYQGHTDIILTVAASQDGKFVVTGGSDRKIIVWDTSNLRPLRVFSQHRDAVTGLAFRRGTN 288
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3X8_9PHAE1.140e-30081.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I6_ECTSI5.200e-24476.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y2EVM9_9BASI9.820e-933.96Uncharacterized protein n=1 Tax=Leucosporidium cre... [more]
A0A524L7R5_THOAR1.100e-834.58WD40 repeat domain-containing protein n=1 Tax=Thor... [more]
A0A2S7QHN2_9HELO7.090e-844.07Wd repeat domain-containing protein n=1 Tax=Rutstr... [more]
UPI00053FFA0A1.130e-735.29DENN domain and WD repeat-containing protein SCD1 ... [more]
A0A2A4K1S8_HELVI2.390e-740.23Uncharacterized protein n=7 Tax=Noctuidae TaxID=71... [more]
UPI000A3C1F0E3.470e-736.07hypothetical protein n=1 Tax=Lentzea kentuckyensis... [more]
A0A5R9FQU6_9ACTN3.760e-731.25Uncharacterized protein n=1 Tax=Streptomyces monta... [more]
A0A3E2HRU1_SCYLI4.160e-743.28Uncharacterized protein (Fragment) n=1 Tax=Scytali... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:91397..97098 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score699.5
Seed ortholog evalue1.6e-198
Seed eggNOG ortholog2880.D7G1I6
Model size2099
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
Cds size2094
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17719.1prot_Ecto-sp6_S_contig86.17719.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig86 91397..97093 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350486.6061096-CDS-Ecto-sp6_S_contig86:91396..919271682350486.6061096-CDS-Ecto-sp6_S_contig86:91396..91927Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 91397..91927 -
1682350486.6189044-CDS-Ecto-sp6_S_contig86:92359..924911682350486.6189044-CDS-Ecto-sp6_S_contig86:92359..92491Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 92360..92491 -
1682350486.6292431-CDS-Ecto-sp6_S_contig86:92838..932681682350486.6292431-CDS-Ecto-sp6_S_contig86:92838..93268Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 92839..93268 -
1682350486.6394832-CDS-Ecto-sp6_S_contig86:93696..938921682350486.6394832-CDS-Ecto-sp6_S_contig86:93696..93892Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 93697..93892 -
1682350486.6500814-CDS-Ecto-sp6_S_contig86:94429..946511682350486.6500814-CDS-Ecto-sp6_S_contig86:94429..94651Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 94430..94651 -
1682350486.6612046-CDS-Ecto-sp6_S_contig86:95154..956591682350486.6612046-CDS-Ecto-sp6_S_contig86:95154..95659Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 95155..95659 -
1682350486.6713154-CDS-Ecto-sp6_S_contig86:97015..970931682350486.6713154-CDS-Ecto-sp6_S_contig86:97015..97093Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig86 97016..97093 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350486.68829-UTR-Ecto-sp6_S_contig86:97093..970981682350486.68829-UTR-Ecto-sp6_S_contig86:97093..97098Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig86 97094..97098 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig86.17719.1

>prot_Ecto-sp6_S_contig86.17719.1 ID=prot_Ecto-sp6_S_contig86.17719.1|Name=mRNA_Ecto-sp6_S_contig86.17719.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=698bp
MATPRKGGTGDEQGDDVPIARVVHRLDDDRNRKDDDVAVVVGQLVPAPTA
TAYAVSATSRTTPDNTLWAGTARGPSSSSSYAAPVMHNSTGSFSVAGTST
SGGARSGGLRCGSSGGSVPGGKARGGDGEGVSAAAAAAAGGEGTYMPVMT
HTGTKNVPGCGTASSTGGRRFGEGAPATTAAGGARQSRGAPFAPAGGGGS
LPMKDGDYVDDGGPVLVACGQGKSMYNVKGCMSSWVLVGGGGGEQPDAVK
EKMAAAAGGGAGGGGGGGAPSSQSWALRSEDNPAGDGGVMCSACVPSIAS
GQASGTLITGGKDSVLREWEIAEGRPRLVAHISGHTDWISCCALVPSATA
GVAPSVAVSGGRDASVRFWHKSAAAAAEAAAARAASDALAKESAQGKRKS
SLRAAFASGSRSSSGRDLGSGGGGGGGIVPPGDGGWSLASSVAPAHGSSE
FVTCCASPGGSSGAAGGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHP
VRSLACSSDGKFLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGLAVDP
GTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAADPSSLSEA
FSSVMSVAEREGGLQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGG
AGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE*
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mRNA from alignment at Ecto-sp6_S_contig86:91397..97098-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig86.17719.1 ID=mRNA_Ecto-sp6_S_contig86.17719.1|Name=mRNA_Ecto-sp6_S_contig86.17719.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5702bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:91397..97098- (Ectocarpus species6 EcLAC_371)
AAATAATGGCAACGCCGAGGAAAGGAGGAACTGGTGACGAGCAAGGCGAC
GACGTCCCCATCGCCCGTGTTGTCCACAGACTGGTGGGTGTGTTGGCCTT
CACCGACCTACACCGCTGTCCTACCGTGTGTGACGTAGATTGATTAGTTG
CACTACGTAGGATATCTTACCCCCCTGGTTCGATTTTCAAAGCTCGATTA
CGTGGCATTGGCAGGAAAAACAGCGACGTTGCCAAAGGAGGCGTTGGGGA
CCGTCCCGTCGAGAGCTTTCCGGCAACACATCCTTTGATTTCAGCACCCC
CTTCGTTGTGGAGTAATGAAGCTTCGAAAATCGTTCCAAAGGGGGGTGTG
GTATCTTACACCCTTCGGTAAGTTCTCTTGAACGAAACCTGTCTGCTGAG
CGCTTGCTCGGTACACATCAAGGTTTCGCCGCAAACGTTTGGCGCATCGC
TCTCTCGTGTTGTCTGTGTTGACTCAGAGAGTGTGTGCCGATTGTCTAAG
TGCAACCCACGAGATTTCTGGGCTTTTCTTTCGGAGTCTTGGGAACGCGT
TGAAGTTCTCATGCATACATCTTCTTGAGTACTTGCTATAACTTCTTGGA
GTCTACGACGCCGCTTCGCCCACCAGCAACCCGCGTCTCTAGAGCTCGAG
AGTCACTCGTGCAAAAGGCTGTGTGCACAGGGTAACAAAGCTTCCAACGG
GTATCGAACAAAACCGTTGCTTTTTACCGATGTCAAGATGACGGAGGAAT
GGACGGGATGACGGCATTTCCGCGTGTTTGGTACACCGCTGCTCTTGCGG
AATACAAAAAAAAAAAAACATGCCTTGTTGTTGATTGTCGTGTCCAGTCA
TGTCGTGTTTCGGTGCATGCCCCGAAGCATATGATACCAACGGCCTGATA
CCACGTCGTACAAGTTCGTACAGACGCAATTGGTGGTTTTGGGCTGATCG
ACAAGGCACAAGATGCATTGCGGTGGTACTTACCGTGCGCCTTGTCGCGC
CTCGACCTACAACAGTTCACGGACACAACTGCTGTGGACAACAGGCAGCA
GTATGCATACAGTAGTATGGATAGAATGAAGGCACAAGTATCACTCGGAA
GTTGAACAGAGTTCGACACATATACTGACACGTGAGACTATTTTTTGTTC
TCTCGTAAGACACAAGTACCACTGAATAGGCATCGGCACACGGGAGGGAT
CAATCTTTGGAGCACAGAAGGGTGGCCATTCTGGATGGATAAATGTATTT
CAGTCATACCTTTCGGGGGGTGAACAGTCTTTTCGCGTCGTACATAGTCA
CCCCTTGCACGTGCTGATCACATTGATTGATGGGTGAGTGTTTAGCTTGC
ACGTAGAATACGGTCCCTAACTTTCTTGATATCTTGTCAACCCAACGGAC
GCGCGCTATCGGCAACGCTTGCTGTACCGTTGTCGACAGGACGATGACCG
AAACAGGAAAGACGACGACGTCGCCGTCGTAGTCGGACAGCTCGTTCCTG
CCCCGACGGCAACCGCCTACGCGGTATCGGCAACGTCAAGGACAACCCCC
GACAACACTCTCTGGGCGGGCACCGCGCGGGGACCTTCATCTTCTTCCTC
GTACGCAGCACCGGTCATGCACAACAGCACGGGCTCTTTTAGCGTCGCTG
GGACCAGCACTTCAGGGGGAGCCCGCAGCGGCGGCCTTAGATGTGGTAGC
AGCGGTGGCTCGGTCCCGGGAGGGAAAGCACGCGGAGGTGACGGTGAGGG
AGTCTCTGCTGCTGCTGCTGCTGCTGCTGGTGGGGAAGGGACGTACATGC
CGGTGATGACACACACGGGGACGAAGAACGTCCCCGGCTGCGGTACCGCT
AGCAGCACGGGGGGGAGGCGTTTCGGGGAGGGGGCGCCGGCGACGACAGC
CGCCGGCGGTGCCAGGCAATCTCGCGGCGCTCCGTTTGCGCCGGGTGAGC
AGGAAGGAGGCTGATAGTAGTGCCGAGGGCGCAGTCTACACAGGCAGGCT
TGTGATTTGCTACCGGGTTGTGATGGGCGTTGTAGCACAGTTTCGGTTTC
TTTTTGTCTGTTGTTTACAATGGTGTGGGTTCTCAGCCTCAGAAGTAGTT
AGGCGACTGTTCCCAACGAGCAAGTCTTACGTCGACCAAGAAATTGCTTC
GTCGAGGTGGTTCTCTTAACAGTTTTGCCGTCGTTTGAACGGGCCGCCGC
CGGTCTCTCGCGCACGCCTGCGCAGGTGCGTCGACATGCTGAATATCGAT
CTCGCCTTATGTAAAGCGCCAAACCACCGCTCTCCTTTCCGCGCACGAAA
CCTATTCCGAAGTCACTCGTAACGCAAAGCAAGTACGTAGATATCAGAGC
GGGTTGCATTAGCCTGTACGTGCCACCTCAGCAAGTATATGGATTTTTTT
TTTTTCTTTCTCTCATGGACGCACGTCCTTGCTTTCGAACACATCAGCAG
GAGGCGGGGGATCCTTGCCGATGAAGGACGGAGACTACGTAGACGACGGG
GGCCCCGTGCTTGTCGCGTGCGGACAGGGGAAGTCGATGTACAACGTCAA
GGGGTGCATGTCCTCGTGGGTGCTCGTTGGCGGTGGCGGCGGCGAGCAAC
CAGACGCCGTCAAAGAAAAAATGGCAGCAGCAGCCGGCGGTGGCGCCGGG
GGGGGGGGCGGAGGAGGAGGTAAGGGGAGATGTTCATCTTTTGGCGATAT
TCACCCGTGGTGGGTCAGGGGTTTTCCTCCTATAATGTCGATGCCAATCC
TTTTTTCCGAAATCTACTCGCAAATTTACAGGCCGACCAGCCTACGGTGA
CCGAGAAACCACGGTGTTTACTATCCCGCATTCAAAGACTTGGACATGTG
TATGATCCGGCTTTGTTGGTGTAGTCTGGGTTGACACAACTTTGTTCCAG
GCCTCCTGCCGATGCCTATTGTCGATGGCTGCACGCCCGACTGCATCTAG
AAGGAAGTTCATACCAGTCTTGCTGCCATTATTTTTTGTGGTGGTGGTGG
TGTTGATTGCTGTTTGTCTCGGGCCTGTTCATGTTAGTTAGAAGGCTCCT
CTGAGCTCTGCTTTAGTTTTTAACGCCTGTTCCGGTAGAGAACCCTTACT
GCATTCGACGACAAACACCCTTCTCGATGACGCAACAATATATAACACGC
AGCCAATCGTCTTGGGGAGATAATCTAACATGCACAAGCACGTTCCCGAC
ATTCAGCACCCAGCAGCCAATCCTGGGCACTTCGGTCCGAGGACAACCCG
GCCGGAGACGGCGGCGTGATGTGCTCGGCGTGCGTCCCGTCGATCGCATC
AGGGCAAGCGTCGGGCACGCTCATCACGGGGGGAAAGGACAGCGTTCTGA
GGGAGTGGGAGATCGCGGAGGGGCGCCCACGCCTGGTGGCCCACATCTCG
GGGTAAGCGTGGGCAGCTTCGCCTCCTTCCCAGCGCTATATTCCTCCCTG
CGGTAGTGCCAGTATATAGGGCAGGCGTTCAATAGACCACCGCGTAGCAA
CAGTGAGCCGGGAGCTCGGCAGCATCTGCAGCGCGCTTCTTTTGGCCAGC
CCTCGTCCTAGAGGCATGCGATGGTAATATTCTCATCCTCGCTCTGAGTA
ACCCTTGCCGGACGGCGCCAGCCACCGTGCCCCCCCCTCCTCACTATCTC
ATGCTCTCTTCGACCTTCTTCGTACCACCCCTCCAACATCACCATTTGCT
CATGGGTGGCAACAGCTCACACACCACCACCGGAGTGCGCTCACCCCCCT
GCATGCCGCAGCCTACATCCGTCCCACTCTCCCCCCCGCCCCCCCGCTCG
AGCTAAGTACCCACCCTAATCACCCCCCAGGCACACCGACTGGATCTCCT
GCTGCGCTCTCGTTCCCTCCGCGACCGCCGGCGTCGCCCCCTCGGTCGCG
GTGTCCGGCGGGCGGGACGCGTCCGTTCGCTTCTGGCACAAGTCCGCCGC
CGCCGCCGCGGAGGCCGCCGCCGCCCGAGCGGCATCGGACGCCCTGGCCA
AGGAGTCCGCCCAGGGCAAGAGGAAGTCGTCGCTCCGGGCGGCGTTCGCG
AGCGGTAGCCGTAGCTCCAGCGGTAGAGATCTGGGAAGCGGGGGCGGCGG
GGGCGGTGGTATTGTGCCGCCGGGCGATGGCGGGTGGTCGCTGGCTTCCT
CCGTGGCCCCGGCGCACGGGTCATCCGAGTTCGTCACGTGCTGTGCTTCC
CCCGGTGGGTCCTCGGGAGCGGCCGGGGGCTGGGTGGCGACCGGGGGCAC
CGATTGGTCGGTGAGTAGGAGGCCTACTGCGTTTGGGCGTCGCCTACATG
AGTTGAGCGATGTGCAGTTGATGGGGGTTTGATCCATCCGTTGGACACGT
TTGTGGCTACGTTTTGGGTTTGCTTCAGAGCTCAATGTCGTCTCCGAACA
CAATCAGCTTTCGCTGCAGTGCTTTCGTGATTATGGTGTCATGCGTTTCC
GACAAAGTTGACACTACTGCTGTAGTTTCCTTCCTTGTGTTTACGCCAAA
CCTTGGCGCTTGAGAATGTTCTGCACTGAAGCTAGTGTACGCTATCATCG
TCATCGAAGAAGTGCCTACAAAAAAAAGCGCCCGTGATGACCCCCCTCGG
TACGCAGGTTCGACTGTGGGACGTGGTCAAGTCCCGTGAGTTGGGCAGAC
TGTCCTTCATGGGCCACAGCCACCCGGTTCGTTCGCTGGCGTGCTCCTCT
GACGGAAAGTTTCTCGTCAGCGGGGGCGACGACCACAAGGTATGCTCCTT
CCGCCTCTTTGGCATTTTTTCTGTGGCATCCTCGGGTACATTTTGGCATT
TAGCGTCTCGGCCCCGTACTCTATAGAGCCATCTCATGGCGTACATCGCG
AACAATGCGTATCTATGGTCGTGAGATTGGAACGCCCAAACAAATCATGG
TGATTCCTTATTAAAGTAGGAGGTTCTAGAATTTATGCGCCAAGTGCCTG
CCTCGTCGTCATGGACGATCCCCAGGGAAACAGACTCGCCCTCAATGGCA
ACTCGTTGGATCCCTCAGGTCACGGCGACTCACACTTGGTGCAGCATATG
CCGACCCGTTGAAAATCCCGATCATTTTGGTCGATTCCGGCTTTCAAAGG
GGTCCACGTACTCCGCACGAAGCAAATGAGCACCCGCCCCCACCCTCCGG
CCGGCCTCCCCGACGACCCAGGTCATCGTCTGGTCGCCTCAGAGTCGGAG
ACCCCTCGCCACGCTCAAGAGCCACGCCAGCGCCGTTCACGGCCTCGCCG
TGGACCCGGGGACGCACTCCGGCGACGCCCCCCGCTGGATAGCCTCGGGC
GGCGGCGAGGGCTTCCTCCTTGTGTGGGACCCCCGTAACTTCGGCTCCCC
GGTCGCGACCCTCCGCGGAGAGGTGGCCGCCGCCGACCCGTCCTCCTTGT
CGGAGGCGTTCTCCTCCGTCATGTCCGTCGCCGAGCGGGAAGGAGGCCTG
CAGGGAGGGCTTGCCGGGGCGAGGTCGAGGGGGGAGAGCGGCCGGTGGGA
GGGGGAGACCACGGGCGCCACGATGCTGAACGCCGTGAACTGCCTCGCCG
CCGGCGGTGCCGGGAGCGGCGGGGACTGGCTGTTCGCCGCCGGGGAGACG
GTCGTCCGGTCTTGGCGCCGGAGGGACGGGGTCTGGCACGGCGGGGCCGG
GCTCCCCGGCGAGGGGCTGGGGGGAATCGCGAGCCTGTCGGTGATCGAGT
AA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:91397..97098-

>mRNA_Ecto-sp6_S_contig86.17719.1 ID=mRNA_Ecto-sp6_S_contig86.17719.1|Name=mRNA_Ecto-sp6_S_contig86.17719.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2094bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:91397..97098- (Ectocarpus species6 EcLAC_371)
ATGGCAACGCCGAGGAAAGGAGGAACTGGTGACGAGCAAGGCGACGACGT
CCCCATCGCCCGTGTTGTCCACAGACTGGACGATGACCGAAACAGGAAAG
ACGACGACGTCGCCGTCGTAGTCGGACAGCTCGTTCCTGCCCCGACGGCA
ACCGCCTACGCGGTATCGGCAACGTCAAGGACAACCCCCGACAACACTCT
CTGGGCGGGCACCGCGCGGGGACCTTCATCTTCTTCCTCGTACGCAGCAC
CGGTCATGCACAACAGCACGGGCTCTTTTAGCGTCGCTGGGACCAGCACT
TCAGGGGGAGCCCGCAGCGGCGGCCTTAGATGTGGTAGCAGCGGTGGCTC
GGTCCCGGGAGGGAAAGCACGCGGAGGTGACGGTGAGGGAGTCTCTGCTG
CTGCTGCTGCTGCTGCTGGTGGGGAAGGGACGTACATGCCGGTGATGACA
CACACGGGGACGAAGAACGTCCCCGGCTGCGGTACCGCTAGCAGCACGGG
GGGGAGGCGTTTCGGGGAGGGGGCGCCGGCGACGACAGCCGCCGGCGGTG
CCAGGCAATCTCGCGGCGCTCCGTTTGCGCCGGCAGGAGGCGGGGGATCC
TTGCCGATGAAGGACGGAGACTACGTAGACGACGGGGGCCCCGTGCTTGT
CGCGTGCGGACAGGGGAAGTCGATGTACAACGTCAAGGGGTGCATGTCCT
CGTGGGTGCTCGTTGGCGGTGGCGGCGGCGAGCAACCAGACGCCGTCAAA
GAAAAAATGGCAGCAGCAGCCGGCGGTGGCGCCGGGGGGGGGGGCGGAGG
AGGAGCACCCAGCAGCCAATCCTGGGCACTTCGGTCCGAGGACAACCCGG
CCGGAGACGGCGGCGTGATGTGCTCGGCGTGCGTCCCGTCGATCGCATCA
GGGCAAGCGTCGGGCACGCTCATCACGGGGGGAAAGGACAGCGTTCTGAG
GGAGTGGGAGATCGCGGAGGGGCGCCCACGCCTGGTGGCCCACATCTCGG
GGCACACCGACTGGATCTCCTGCTGCGCTCTCGTTCCCTCCGCGACCGCC
GGCGTCGCCCCCTCGGTCGCGGTGTCCGGCGGGCGGGACGCGTCCGTTCG
CTTCTGGCACAAGTCCGCCGCCGCCGCCGCGGAGGCCGCCGCCGCCCGAG
CGGCATCGGACGCCCTGGCCAAGGAGTCCGCCCAGGGCAAGAGGAAGTCG
TCGCTCCGGGCGGCGTTCGCGAGCGGTAGCCGTAGCTCCAGCGGTAGAGA
TCTGGGAAGCGGGGGCGGCGGGGGCGGTGGTATTGTGCCGCCGGGCGATG
GCGGGTGGTCGCTGGCTTCCTCCGTGGCCCCGGCGCACGGGTCATCCGAG
TTCGTCACGTGCTGTGCTTCCCCCGGTGGGTCCTCGGGAGCGGCCGGGGG
CTGGGTGGCGACCGGGGGCACCGATTGGTCGGTTCGACTGTGGGACGTGG
TCAAGTCCCGTGAGTTGGGCAGACTGTCCTTCATGGGCCACAGCCACCCG
GTTCGTTCGCTGGCGTGCTCCTCTGACGGAAAGTTTCTCGTCAGCGGGGG
CGACGACCACAAGGTCATCGTCTGGTCGCCTCAGAGTCGGAGACCCCTCG
CCACGCTCAAGAGCCACGCCAGCGCCGTTCACGGCCTCGCCGTGGACCCG
GGGACGCACTCCGGCGACGCCCCCCGCTGGATAGCCTCGGGCGGCGGCGA
GGGCTTCCTCCTTGTGTGGGACCCCCGTAACTTCGGCTCCCCGGTCGCGA
CCCTCCGCGGAGAGGTGGCCGCCGCCGACCCGTCCTCCTTGTCGGAGGCG
TTCTCCTCCGTCATGTCCGTCGCCGAGCGGGAAGGAGGCCTGCAGGGAGG
GCTTGCCGGGGCGAGGTCGAGGGGGGAGAGCGGCCGGTGGGAGGGGGAGA
CCACGGGCGCCACGATGCTGAACGCCGTGAACTGCCTCGCCGCCGGCGGT
GCCGGGAGCGGCGGGGACTGGCTGTTCGCCGCCGGGGAGACGGTCGTCCG
GTCTTGGCGCCGGAGGGACGGGGTCTGGCACGGCGGGGCCGGGCTCCCCG
GCGAGGGGCTGGGGGGAATCGCGAGCCTGTCGGTGATCGAGTAA
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