mRNA_Ecto-sp6_S_contig86.17718.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI) HSP 1 Score: 976 bits (2522), Expect = 0.000e+0 Identity = 538/563 (95.56%), Postives = 543/563 (96.45%), Query Frame = 1
Query: 1 ALSTCRSLPDLCALLSLDTRPMSTFEGATAGTKTXXXXXXXXXXXXXTGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTEPSSEIEVMPPSTASPGSTADRTAFLRDKLVVENGXXXXXXXXXXXXXXXXXXXXXXXVEEFVGEEGGDAMIEMLSAFDDDSGDDET 1689
+LSTCRSLPDLCALLSLDTRPMSTFEGATAGTKT TGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQC+PFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQ D XXXX G+GATQKRERKG EVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWG+AGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKE+EEGS EDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTEPSSEIEVMPPSTASPGSTADRTAFLRDKLVVENGXXXXXXXXXXXXXXXXXXXXXXXVEEFVGEEGGDAMIEMLSAFDDDSGDDET
Sbjct: 5 SLSTCRSLPDLCALLSLDTRPMSTFEGATAGTKTTGEQTEGNHGERNTGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQADDXXXXE--GRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGVAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEKEEGSYEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTEPSSEIEVMPPSTASPGSTADRTAFLRDKLVVENGXXXXXXXXXXXXXXXXXXXXXXXVEEFVGEEGGDAMIEMLSAFDDDSGDDET 565
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A835YVT2_9STRA (DUF383 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT2_9STRA) HSP 1 Score: 231 bits (589), Expect = 5.810e-66 Identity = 161/392 (41.07%), Postives = 212/392 (54.08%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQ--CLPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKC-----GVYFVIREMDKSEPDAEISQVCYNLVNFL 1320
+ E VPFLRD RP++R+AAA T + +AT+EG +L++ GAV WLC++ GDV I KD+++ L+N A+ AA E M +GIVN +ME V D+ C P RDLCL LLANVT + G ++ Q+G GG EG ++RRLAR L T XXXXXXXX +DQWQH AS+LCN R GR+ L R D V L ++LPQL SA RR GI+GC+RN CF+ HP LL +V+PH+L LA +D Y F++KV LDP VWR EG+ REP + +++EAL LCA ES +LRK G Y V+RE + E D + C+ + L
Sbjct: 8 VAEIVPFLRDSRPDLRKAAANTCMQLAATEEGRLMLYEAGAVPWLCKLVGDVDAIAKDSITALINTGADVP--AATEQMVNSGIVNSVMEVVVDQSQDCTPRRRDLCLTLLANVTTTEPGVERMLQLGGKGGP--EGLHVRRLARALV--------------------------------TTLXXXXXXXXXXXXXXXXXXXXXXXGVDQWQHAASLLCNVTREETGRQILARADTGV-LEDLLPQLRSAVAARRRGISGCIRNLCFDAKLHPRLLDGARVLPHVLRGLASSRDAYSFQDKVALDPMVWRAPAGEGAM-----TFHEREPDAETRGNLLEALQLLCAHPESCAALRKQATLLQGTYCVVRETARRETDERLLVACHAIATAL 357
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: W4FY03_9STRA (Protein HGH1 homolog n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY03_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.460e-35 Identity = 131/412 (31.80%), Postives = 192/412 (46.60%), Query Frame = 1
Query: 148 SITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAV-SDEQCLPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRR-------PDPLVALTEVL-PQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLA-----DDKDEYDFEEKV--ILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1335
S+++E + E V FL +PR ++RQ+A V + T G+ L K AVK LCR+ GD+ I +DA+ LVN++A T A E+ K IVNR+M + SD Q +DL + LLANVT GA L + A ++RE R+L P +G+ E K + D +Q+ A+VL N ++ EGR L R P + +L VL PQ+ SAN +RR GI +RN CF+ +H +L + +V HL RLA +D D+ + +L P+ ++RE +++DIVE LL LC+ R LR+ VY +IR E D ++S+ Y LV+FL RDE+
Sbjct: 2 SVSKE-VTELVEFLSNPRADVRQSAIQLTVGLTGTDSGIQQLIKADAVKALCRLIGDMNAIARDAIHALVNITA--THHGACENALKHDIVNRLMNQLDSDFQ----HKDLSVMLLANVTTTPEGAKALV-INDAKYSVREVILQNLTVRFLESEPEPDGIDPTT---------------------------------------NEPKWD---DDYQYVANVLANITQLEEGRAFLLRLRTKQGQPGQVQSLVHVLLPQVHSANVIRRRGIIQALRNLCFDSDNHFFLYDTLDIVVHLQRRLAGPEPLEDADKVGMSSSILAVLGPK------------------KKRETDAQVRKDIVECLLLLCSSRNGRNILRQKKVYPIIRNAHLVEADEDVSEQIYKLVDFLIRDEE 345
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A8K1CI53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI53_PYTOL) HSP 1 Score: 138 bits (347), Expect = 6.930e-32 Identity = 124/416 (29.81%), Postives = 198/416 (47.60%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV-ALLH--KCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKL----AQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTE-VLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGK 1389
+E+ V FL PRPE+R++A++ V SA+ + V LLH K ++ LCR+ D+ I +DA+ L+N++A A E K ++NR+M + D++ +++L + LLANVT + GA L Q G A A RE + ++ P +G+ D A D D++Q+ A +L N +++ EGR+ + + L E +LPQL S N VRR GI ++N CF+ H +LL++ +P LM L + D EEK+ + P V++ ++RE + ++ V+ALL L R +LR+ VY +IR EPD EI Y LV+FL RDE+ ++ D +++ A S+ K
Sbjct: 7 LEDLVGFLSSPRPELRKSASSMLVNLSASDQAVYQLLHLQKNDVIQGLCRVVSDLRPIAEDAIKALINLTAIHPD--ASERTIKFDLLNRVMTQLEDDEWR--LKNLSMMLLANVTTTEAGARALIGADTQAGAATAAYREKKIRTLTVSFMESEPEPDGVD--------------ADSGEAKWD----------------------------DEYQYVAVILGNISQLEEGRQFILKVRNGKTLIEALLPQLRSPNLVRRRGITALIKNLCFDTDSH-FLLYDHLDIPSKLMYLLAGPEPLDPEEKIGMHPDVYKL-----------GPKKKREHDRFVRLACVDALLLLGTSRNGRNNLRQKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWDKIRTEAFSDDK 364
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A2P4WXK1_9STRA (Protein HGH1 homolog (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXK1_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.420e-31 Identity = 117/399 (29.32%), Postives = 196/399 (49.12%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLA----QVGVAGGALREGQYIRRLAR-WLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1335
+EE V FL PRPE+R++A++ + +A+ +G+ L K ++ LCR+ D+ I +DA+ L+N++A + AA E K ++NR+M V D++ + D + LLANVT GA L + A ALRE + IR L +L P +G+ +A + + D D++Q+ A++L N +++ +GR L + +L +LPQL S N VRR G+ ++N CF+ +H +L ++ + H+++ LA +E D ++K+ ++P V+ S ++RE + ++ V+ LL LC R+ LR+ VY +IR+ EPD EI Y LV+FL RDE+
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLKKLDVMQALCRVVSDMRPIAEDAIKALINLTA--ANPAACERALKYDLLNRVMTQVEDDEWR--LTDYSMMLLANVTTTPEGAKALLGYDDKSTDASLALRE-KKIRTLTNSFLEGEPEPDGVD------------------SATGEPKWD------------------------DEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDSDNHFYLYDQLDIPTHMMVLLAGP-EELDEDDKMGMNPVVY-----------SQGDKKKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRDAHLVEPDEEIGDQIYKLVDFLIRDEE 352
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: K3WKR7_GLOUD (Protein HGH1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKR7_GLOUD) HSP 1 Score: 136 bits (343), Expect = 3.700e-31 Identity = 115/409 (28.12%), Postives = 195/409 (47.68%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVL--DQWQHCASVLCNAARIPEGRR-ALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLA 1374
+EE V FL PRPE+R++A++ V +A+ +G+ L K ++ LCR+ D+ I +DA+ L+N++A + AA E K ++NR+M + D++ ++D + LLANV+ GA L + Y DA+ D ALR+ + + + +++ + D++Q+ A++L N +++ EGR L+ + E+LPQL S N VRR GIA VRN CF+ +H + L++ +P + L + D ++KV L P V+R ++ ++RE + ++ V+ LL LC R LR+ VY ++R EP+ EI Y LV+FL RDE ++ + ++S A
Sbjct: 15 VEELVSFLSHPRPELRKSASSLLVNMTASDQGIHQLMQLAKFDVIQALCRVVSDMRPIAEDAIKALINITA--ANPAACERTLKFDLLNRVMTQIDDDEWR--LKDYSMMLLANVSTTPEGARAL-------------------------------MGY---------DAKSTDALLALREKKMRTLTTLFLESEAEPEGIDQETGDAKWDDEYQYVANILANISQLAEGRDFLLKNRGNTTLIAELLPQLRSPNVVRRRGIASVVRNLCFDTDNH-FFLYDQLDIPSKMNYLLAGPEPLDEDDKVGLHPSVYRLGEK-----------KKREKDKQVRLYAVDCLLLLCTTRNGRNDLRRKKVYPIVRNAHLVEPEEEIGDQIYKLVDFLIRDEDGEEPDWNEIRSKA 367
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A662XPP2_9STRA (Protein HGH1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPP2_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.250e-31 Identity = 121/399 (30.33%), Postives = 191/399 (47.87%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKL----AQVGVAGGALREGQYIRRLAR-WLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVL-PQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1335
+EE V FL PRPE+R++A++ ++ +A+ + V L K V+ LCR+ D+ I +DA+ L+N++A + A E K ++NR+M V D + + D + LLANVT GA +L A+ A ALRE + IR L +L P G+ AA D + D D++Q+ A++L N +++ +GR L + +L L PQL S N VRR G+A ++N CF+ +H +L ++ V +++ LA + D E+K+ + P V+ S ++RE + ++ V+ LL LC R+ LR+ VY +IR EPD EI Y LV+FL RDE+
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLISMTASDQSVFQLLALPKLDVVQALCRVVSDMRPIAEDAIKALINLTAANPT--ACERALKYDLLNRVMTQVEDSEWR--LTDYSMMLLANVTTTPEGAMELLGYDAKATDATLALRE-KKIRTLTNAFLESEPEPEGVD------------------AATGDAKWD------------------------DEYQYVANILANVSQLEQGRAFLLKMRQDTSLVGALMPQLKSPNVVRRRGVAAALKNLCFDSDNHFYLYDQLDVPTNMMCLLAGPEP-LDEEDKLGMSPVVF-----------SQGDKKKREQDRQVRLAAVDCLLLLCTTRNGRKDLRRKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEE 352
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: G4YZ65_PHYSP (Protein HGH1 homolog n=17 Tax=Phytophthora TaxID=4783 RepID=G4YZ65_PHYSP) HSP 1 Score: 135 bits (340), Expect = 9.900e-31 Identity = 117/397 (29.47%), Postives = 186/397 (46.85%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLA---QVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLD-QWQHCASVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDE 1332
+EE V FL PRPE+R++A++ + +A+ +G+ L K V+ LCR+ D+ I +DA+ L+N++A A E K ++NR+M V DE+ + D + LLANVT GA L + G + IR+L + G P P V S GE D ++Q+ A++L N +++ +GR L + +L +LPQL S N VRR G+ ++N CF+ +H +L ++ V H+++ LA +E D ++K+ ++P V+ S ++RE + ++ V+ LL LC R+ LR+ VY +IR EPD EI Y LV+FL RDE
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLKKFDVVQALCRVVSDMRPIAEDAIKALINLTAANPG--ACERALKYDLLNRVMTQVEDEEWR--LTDYSMMLLANVTTTPEGAKALLGYDEKSTHGTIAVRERKIRKLTNSFLE-----GEPEPDGVDSS-------------------------------------SGEPKWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDTDNHFYLYDQLDVPTHMMVLLAGP-EELDEDDKIGMNPVVY-----------SQGDKKKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRNAHLEEPDEEIGDQIYKLVDFLIRDE 351
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A5D6XXP2_9STRA (Protein HGH1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXP2_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.790e-30 Identity = 120/435 (27.59%), Postives = 203/435 (46.67%), Query Frame = 1
Query: 157 RELIEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLAQVGVAGG------ALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLDQWQHCASVLCNAARIPEGRR-ALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTE 1431
R +EE V FL PRPE+R++A++ + +A+ +G+ L K V+ LCR+ D+ I +DA+ L+N++A + AA E ++NR+M + D+ ++D + LLANVT GA L +G G ALRE + + +L P G+ A D + D D++Q+ A++L N +++ +GR L+ + E++PQL S N VRR GIA VRN CF+ +H + L++ VP + L + +D +++ + P ++R + ++RE + ++ V+ LL LC R LR+ VY V+R EPD E+ Y LV+FL RDE+ ++ + +++ A ++ +A G + T E
Sbjct: 12 RTSVEELVGFLSHPRPELRKSASSLLINMTASDQGMHQLLQLQKLDVVQALCRVVSDMRPIAEDAIKALINLTA--ANPAAAERALTFDLLNRVMTQIEDDDWR--LKDYSMMLLANVTTTPEGARAL--MGYDGRTDDALLALREKKMRTLTSLFLESEPEPEGVD------------------ADTGDAKWD------------------------DEYQYVANILANISQLEQGRDFLLKNRGGTTLVAELVPQLRSPNVVRRRGIAAAVRNLCFDTDNH-FFLYDQLDVPSKMSYLLAGPEPFDADDRAGMHPSLYRLGDK-----------KKREQDKQVRLAAVDCLLLLCTTRNGRNDLRRKKVYPVVRNAHLVEPDEEVGDQIYKLVDFLIRDEEGEEPDWNDVRAKAFADDADAVGGEAAESVTAE 386
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Match: A0A3M6VFC6_9STRA (Protein HGH1 homolog n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFC6_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.010e-30 Identity = 117/399 (29.32%), Postives = 188/399 (47.12%), Query Frame = 1
Query: 166 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLA----QVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQPDXXXXXXXXGKGATQKRERKGEEVLD-QWQHCASVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEQEEGSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1335
+EE V FL PRPE+R+AA++ + +A+ +G+ L K V+ LCRI D+ I +DA+ L+N++A + A E K ++NR+M V D++ + D + LLANVT G L + A ALRE + + +L P +G+ AT GE D ++Q+ A++L N +++ +GR L + +L +LPQL S N VRR GI ++N CF+ +H +L ++ + H+++ LA +E D ++K+ ++P V+ S ++RE + ++ V+ LL LC R LR+ Y +IR EPD EI Y LV+FL RDE+
Sbjct: 13 VEELVSFLSHPRPELRKAASSLLINMTASDQGMFQLLQLKKFDVVQALCRIVSDMRPIAEDAIKALINLTA--ANQVACERALKFDLLNRVMAQVEDDEW--HLTDYSMMLLANVTTTIEGTKALLGYDDKSTDAAIALREKKIRTLTSSFLEGKPEPDGVD-------------------------------------SAT------GEPTWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGITAALKNLCFDSDNHFYLCDQLDIPTHMMVLLAGP-EELDEDDKMGMNPVVY-----------SQGNKKKREHDRLVRLAAVDCLLLLCTTRTGRNELRRKKAYPIIRNAHLEEPDEEIGDQIYKLVDFLIRDEE 352 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig86.17718.1 >prot_Ecto-sp6_S_contig86.17718.1 ID=prot_Ecto-sp6_S_contig86.17718.1|Name=mRNA_Ecto-sp6_S_contig86.17718.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=564bp ALSTCRSLPDLCALLSLDTRPMSTFEGATAGTKTTGEQTEGNHGEGNTGSback to top mRNA from alignment at Ecto-sp6_S_contig86:80720..90348+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig86.17718.1 ID=mRNA_Ecto-sp6_S_contig86.17718.1|Name=mRNA_Ecto-sp6_S_contig86.17718.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9629bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:80720..90348+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig86:80720..90348+ >mRNA_Ecto-sp6_S_contig86.17718.1 ID=mRNA_Ecto-sp6_S_contig86.17718.1|Name=mRNA_Ecto-sp6_S_contig86.17718.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1692bp|location=Sequence derived from alignment at Ecto-sp6_S_contig86:80720..90348+ (Ectocarpus species6 EcLAC_371)back to top |