mRNA_Ecto-sp6_S_contig85.17704.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 526 bits (1354), Expect = 6.630e-165 Identity = 270/394 (68.53%), Postives = 311/394 (78.93%), Query Frame = 2
Query: 506 GERIGSGKGAEKIAPPELQEILPLMLTFLDSRSWCGCLSVSHATHDAVRAMFLGLMQDGTRPEEGWTVPLDVLTLKTDGAGVAHLAANECGITISGELDNLTQLRAVVIPPPQSGFVSVEGQQYIATSPILRCRWVGRDSSQGPWTVSFPLEEEDGLSNPTEISQVLRRGDNPQDEWEVQTAGLKASTRHPSMQVEVTHFSDVMTADKLREIEKTSASSFYKRKRVWGTKVKLLFSRYVHVYNASSEAMTVLQVLPAVMESGRGVQLSLPVVGGGGGGNRDITIHDDSTIEV-RQVAAWVNPFDGSGNEPPSYPAKFETRLGMKEMRVIPYTATGSRKENNLKVFPRDFFHCSAGYDYYLLQKMVDESLRPRFWEGDVNTDTSEERKVMDIVNR 1684
G RIGSGK A K AP +LQ+ILPLMLTFLDSRSWC CLSV + D VRA+ GLM DG RPEEGWTVPLDVLTLKTD AGVA+LAANECGI I GE +L L+AV++PPPQSGF+SVEG+QYIATSPILRCRW G + SQG WTVSFPLEEEDGLSNPTE+SQVL RGD QDEWEVQT GLKA+TRHPSMQVEVTHFSD++TADKLREIE S S Y+RKR W FS++V VYNASSEAMTVLQ+LPAV ES R Q+S+P GGG GG+R I ++D ++++ +++ AWVN +G+ PP+ PAK TRLGMK MRVIPYT TGSR N+L+VFPR F C AGYDYYLLQKM+ S R RF DV+ + SEER V+DIVNR
Sbjct: 1092 GYRIGSGKDAVKSAP-QLQQILPLMLTFLDSRSWCQCLSVGRSARDTVRALISGLMPDGPRPEEGWTVPLDVLTLKTDDAGVAYLAANECGIAIHGEAGSLAHLKAVIVPPPQSGFISVEGEQYIATSPILRCRWTGNNCSQGTWTVSFPLEEEDGLSNPTELSQVLCRGDELQDEWEVQTTGLKAATRHPSMQVEVTHFSDIITADKLREIEAKSTSIVYERKRSW------FFSKHVRVYNASSEAMTVLQILPAVTESARSGQVSVP--GGGLGGSRSINVNDGNSVDDWQEIPAWVNASSETGSAPPTNPAKLRTRLGMKAMRVIPYTVTGSRVTNDLEVFPRHIFECLAGYDYYLLQKMICGSGRSRFLAEDVDGNMSEERTVLDIVNR 1476
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A6H5K3Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y2_9PHAE) HSP 1 Score: 490 bits (1262), Expect = 3.030e-163 Identity = 256/391 (65.47%), Postives = 295/391 (75.45%), Query Frame = 2
Query: 506 GERIGSGKGAEKIAPPELQEILPLMLTFLDSRSWCGCLSVSHATHDAVRAMFLGLMQDGTRPEEGWTVPLDVLTLKTDGAGVAHLAANECGITISGELDNLTQLRAVVIPPPQSGFVSVEGQQYIATSPILRCRWVGRDSSQGPWTVSFPLEEEDGLSNPTEISQVLRRGDNPQDEWEVQTAGLKASTRHPSMQVEVTHFSDVMTADKLREIEKTSASSFYKRKRVWGTKVKLLFSRYVHVYNASSEAMTVLQVLPAVMESGRGVQLSLPVVGGGGGGNRDITIHDDSTIEVRQVAAWVNPFDGSGNEPPSYPAKFETRLGMKEMRVIPYTATGSRKENNLKVFPRDFFHCSAGYDYYLLQKMVDESLRPRFWEGDVNTDTSEERKVMDIV 1678
GE++GS KG K APP+LQ+ILPL+LTFLDSRSWC CL+VS A DAVRA+F GLM G RPEE WTVPLDVLTLKTDGAG+AH+AANEC ITI G +L L+AV++PPPQSGF++V+G+QYIATSPILRCRW G D SQGPWTVSFPLEEEDGLSNPTE+S+VLRRGD DEWEVQTAGLKAS RH SMQVEVTHFSDV+TADKLREIE+ A S+Y+RKR WG FSR+ HVYNASSE MTVLQ LP M++ RGVQ+ P GGGG NR T D + E + W N G GN+PP A+F T G EM V+PYT E+NL+VFPRDFF C AGYDYYLLQKM+D +R R+ E DV D +EE V+ V
Sbjct: 68 GEQVGSDKGTAKNAPPQLQQILPLLLTFLDSRSWCVCLAVSSAARDAVRALFSGLMTVGPRPEERWTVPLDVLTLKTDGAGIAHMAANECNITIHGSAGDLAHLKAVIVPPPQSGFITVKGEQYIATSPILRCRWTGNDCSQGPWTVSFPLEEEDGLSNPTELSRVLRRGDELWDEWEVQTAGLKASLRHTSMQVEVTHFSDVVTADKLREIEEKWAKSYYERKRWWGAPS---FSRHAHVYNASSEEMTVLQELPPRMDAERGVQIPTPH--GGGGMNRAYTTPDGNARERALLPPWPNANGGDGNDPPIISARFRTLPGAGEMCVVPYTVRVD-PEHNLRVFPRDFFRCLAGYDYYLLQKMLD--VRARYRERDVK-DLNEEETVIHEV 449
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI) HSP 1 Score: 161 bits (408), Expect = 4.590e-37 Identity = 86/120 (71.67%), Postives = 93/120 (77.50%), Query Frame = 2
Query: 32 DVYA-STDTSGTEVVSAGSVRTFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRKTNRLGTP 388
D Y+ S D G +VVSAGSV +F +KLFQMVQ E DSIVGFVADG AFEVKDP RLEQD+LPKYFR S F SL LN Y FK ERSVWI+KH FFRRDEPELLHALKRKTN+ G P
Sbjct: 346 DAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAP 465
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A6H5L0A5_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A5_9PHAE) HSP 1 Score: 160 bits (405), Expect = 7.330e-37 Identity = 85/120 (70.83%), Postives = 93/120 (77.50%), Query Frame = 2
Query: 32 DVYA-STDTSGTEVVSAGSVRTFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRKTNRLGTP 388
D Y+ S D G +V+SAGSV +F +KLFQMVQ E DSIVGFVADG AFEVKDP RLEQD+LPKYFR S F SL LN Y FK ERSVWI+KH FFRRDEPELLHALKRKTN+ G P
Sbjct: 19 DAYSRSGDVPGMDVMSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGVP 138
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A7S2ANP9_9STRA (Hypothetical protein n=4 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANP9_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.570e-21 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 2
Query: 92 TFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRKTN 373
+F +KL+ +V ESD IVGF+ DG +FEVKDP RLE ++LPKYFR S F SL LN Y FK + ER +WI++H F RD+P LL LKRKT+
Sbjct: 38 SFVRKLYDLVTCESDDIVGFLPDGSSFEVKDPKRLEVEVLPKYFRHSRFQSLVRQLNFYSFKKASKERHMWIYRHELFHRDKPVLLEGLKRKTS 131
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A4D9D5W3_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5W3_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.620e-19 Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = 2
Query: 83 SVRTFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRK 367
S TF +KLFQMV E++ I+ F DG++F VKDP RLE ++LPKYFR S F SL LN Y FK ER +WI++H F++ +P LL LKRK
Sbjct: 59 SANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRK 153
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: I2CQX2_NANGC (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX2_NANGC) HSP 1 Score: 96.3 bits (238), Expect = 7.430e-18 Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 2
Query: 95 FGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRKTNRLGTP 388
F +KLF MV E SI+ F DG +FEVK+P RLE ++LP+Y+R F S LN Y FK ER++WI++H F+R P+LL LKRKT+ P
Sbjct: 27 FVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTSNAHHP 124
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A4D9D0Y9_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0Y9_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 7.710e-17 Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 2
Query: 95 FGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGFKTSKLERSVWIFKHPFFRRDEPELLHALKRKTNRLGTP 388
F +KLF MV E SI+ F DG +FEVK+P RLE ++LP+Y+R F S LN Y FK ER++WI++H F+R P+LL LKRKT+ P
Sbjct: 27 FVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLEMLKRKTSNAHHP 124
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A1V9ZQ60_9STRA (HSF-type DNA-binding n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ60_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.110e-12 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 2
Query: 83 SVRTFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGF-KTSKLERS----VWIFKHPFFRRDEPELLHALKRKT 370
SV F QK +++ I + DG AF +K+P EQ MLP+YF+ S+F S L YGF KT KL+ S +W FKHP FRRDEP+ + +++RKT
Sbjct: 197 SVAVFLQKTMELLGSCPVEIASWTMDGNAFVIKNPKAFEQTMLPRYFKHSNFASFARQLRFYGFDKTKKLQGSGGLSMWEFKHPKFRRDEPDKMASIRRKT 297
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Match: A0A024UKG1_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKG1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.140e-12 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 2
Query: 86 VRTFGQKLFQMVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLYGF-KTSKLERSVWIFKHPFFRRDEPELLHALKRKT 370
V F +LF +++ ES +++ + DG +F++ DP R Q++LPKYF ++F S + LN +GF K +K + + F HP+F+++EP+ LH +KRK+
Sbjct: 25 VPKFLLQLFDILEAESSAVIKWADDGGSFQILDPVRATQEILPKYFSHNNFQSFQRQLNYFGFRKWTKTKTFICTFSHPYFQKNEPDKLHLIKRKS 120 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17704.1 >prot_Ecto-sp6_S_contig85.17704.1 ID=prot_Ecto-sp6_S_contig85.17704.1|Name=mRNA_Ecto-sp6_S_contig85.17704.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=524bp MVQRESDSIVGFVADGMAFEVKDPTRLEQDMLPKYFRFSSFMSLRHLLNLback to top mRNA from alignment at Ecto-sp6_S_contig85:713369..720738+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17704.1 ID=mRNA_Ecto-sp6_S_contig85.17704.1|Name=mRNA_Ecto-sp6_S_contig85.17704.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7370bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:713369..720738+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:713369..720738+ >mRNA_Ecto-sp6_S_contig85.17704.1 ID=mRNA_Ecto-sp6_S_contig85.17704.1|Name=mRNA_Ecto-sp6_S_contig85.17704.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1572bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:713369..720738+ (Ectocarpus species6 EcLAC_371)back to top |