mRNA_Ecto-sp6_S_contig85.17697.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A6H5KBH3_9PHAE (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH3_9PHAE) HSP 1 Score: 613 bits (1582), Expect = 4.140e-212 Identity = 371/398 (93.22%), Postives = 378/398 (94.97%), Query Frame = 1
Query: 109 MSTPASHGIAGWVVPNANMNVKFNFV-DGRSPPSCSSSVDGVKRLGGRGCNSRKSWSTMSTSTREVIPLSPLSQLRLEEEVEDGLSTQARRPAQTSAFDLPKLVPIEDEDLVFKNHHFAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGE--GAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQVLNSD 1293
MSTPASHGIAGWVVPNANMNVKF+FV GRSPPSC S VDGVKRLGGRGCNSRKSW+TMSTSTR+ I LSPLS+LRLEEEVEDGLSTQARRP QTSAFDLP LVPIEDEDL++KNHHFAERANWLVPGKVLLGKYPGQIPADL TGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDD+GMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX GAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQVLN D
Sbjct: 1 MSTPASHGIAGWVVPNANMNVKFDFVAGGRSPPSCPSPVDGVKRLGGRGCNSRKSWNTMSTSTRKGIALSPLSRLRLEEEVEDGLSTQARRPTQTSAFDLPNLVPIEDEDLIYKNHHFAERANWLVPGKVLLGKYPGQIPADLTTGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDNGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQVLNRD 398
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: R1BR51_EMIHU (Protein-tyrosine-phosphatase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BR51_EMIHU) HSP 1 Score: 117 bits (292), Expect = 3.920e-24 Identity = 89/296 (30.07%), Postives = 119/296 (40.20%), Query Frame = 1
Query: 403 LPKLVPIEDEDLVFKNHHFAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSG----FRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQ 1278
LP L ++D V H A+WLVPG+VL+G+YPG P+ T R+R AELPPQ++ + W P SG + F+ YR DA EG F HFPIPD A++ E L GLV EL G+V +IHCW GRGRTG++A+CLLG LY + AE++L RV R +++ ++ SPET Q E VR +FK+
Sbjct: 238 LPALCSLDDATAVAAQHACTSFASWLVPGRVLVGRYPGSCPSRPCTAAE---QRER-----------------AELPPQEEAAAWPPGGVAGQSGNAVAPQTARFQPYRADA--------------------------------------------------------------------------PEGAQFLHFPIPDRGVADSPEALDGLVSELSRRALDGQVLYIHCWGGRGRTGMVAACLLGSLYRYVGAEEALQRVQR------CLSLREAGCRSPETEAQVEAVREWFKR 433
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A8J9WNE9_9CHLO (Probable cyclin-dependent kinase inhibitor 3 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNE9_9CHLO) HSP 1 Score: 112 bits (279), Expect = 8.160e-24 Identity = 99/294 (33.67%), Postives = 131/294 (44.56%), Query Frame = 1
Query: 388 TSAFDLPKLVPIEDEDLVFKNHHFAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLF 1269
TS LP L P+ +E H F+ ANW++PGKVL+G+YP P+ T + +V I+ +GGVT LQAE+PPQ + + G +GF Y A V XXXXXXXXXX LAF H+PI DL E + L+ E+E V++G+V ++HCW GRGR G + +CLL +LY L AEQ+L RV R Y TRG + G SPET +Q V+ F
Sbjct: 10 TSVATLPALQPLTEEAEFDAAHTFSSFANWIIPGKVLVGRYPYVEPSRCRTHDQGEA---QVQQILQQGGVTTFISLQAEVPPQAEMTMGG-----------VNGFVPYASVATLLVSAMSGPPSMKEVNGLRNEYLDTFLPPRRKXXXXXXXXXXERMPRRK---------------------------LAFLHYPITDLD-IPTPEQVRELIGEIERRVQAGEVLYVHCWGGRGRAGTVGACLLAQLYG-LDAEQALARVQRAYNTRGELGYG-----SPETLQQVNFVKAF 255
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A250WX85_9CHLO (Protein-tyrosine-phosphatase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WX85_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 1.930e-18 Identity = 88/296 (29.73%), Postives = 123/296 (41.55%), Query Frame = 1
Query: 403 LPKLVPIEDEDLVFKNHHFAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQVLNS 1290
+P+L P++D + H F ANWLVPG V+LG+YP P+ + + ++L++ G+T CLQ ELPPQD G KD GF Y+ A A +V + L F H PI DL + E L L+ +LE + SG+ +IHCW GRGR G + +C+L R+Y +S ++SL RV R + TRG V SPET EQ E VR + + V +S
Sbjct: 46 VPRLQPLDDSYEEW--HTFKPYANWLVPGHVMLGRYPFVEPSRCLSRKQGEEQLSQILNV----GITTFVCLQDELPPQDMLKISG----KD-------GFLPYKTTAELIQAALNGPAPETEDLHALRTPALNKFLPPKKKQ------------------------------ASLVTNRKE---LKFLHSPIVDLG-LPSVEALQKLLFDLETRLESGEKLYIHCWGGRGRAGTVGACMLQRMYG-VSVDESLERVQRAFSTRGDVQYK-----SPETDEQFEFVRNYARLVASS 284
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: I0YRS1_COCSC (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YRS1_COCSC) HSP 1 Score: 92.8 bits (229), Expect = 1.690e-17 Identity = 78/272 (28.68%), Postives = 109/272 (40.07%), Query Frame = 1
Query: 457 FAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFF 1272
F++ ANW++P KVLLG+YP P+ T + ++L + GVT LQAE PPQ + G +GF Y A V + A E+ LAF H+PI DL T+ + L+ E+ V +G+V ++HCW GRGR G +A+CLL LY + AEQ+L RV R Y TRG + SPET +Q V+ +
Sbjct: 1 FSQFANWIIPSKVLLGRYPYVEPSRCRTHDEGEAQVSQIL----QAGVTTFISLQAETPPQTSMTMGG-----------VNGFVPYASVAALLVSAMSGPPDMKEVNGLRNPYLDTFLPPRRKQQR--------------------------QEAQELEEQRPPRRQLAFLHYPITDLD-IPTTDQVRELIGEIARRVEAGEVLYVHCWGGRGRAGTVAACLLASLYG-VDAEQALARVQRAYDTRGELGYA-----SPETLQQVNFVKSYI 224
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A150GA54_GONPE (Protein-tyrosine-phosphatase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GA54_GONPE) HSP 1 Score: 90.1 bits (222), Expect = 2.280e-16 Identity = 83/284 (29.23%), Postives = 114/284 (40.14%), Query Frame = 1
Query: 457 FAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEG-------LAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFKQVLN 1287
F + ANWL+PG VLLG+YP P+ + + L +L GVT L LQAELPPQ+ + G GF Y+ A A + G + L R +G L F H PIPDL +TE+ A L+ +L+ + G+ ++HCW GRGR G + +CLL +Y +LSA++ L RV R + TR R SPET EQ VR + + N
Sbjct: 30 FTDFANWLIPGSVLLGRYPYVEPSRCLR----REQGEEQLKKILETGVTTLVSLQAELPPQEKMTLAGS-----------HGFLPYK--ATADLIRSSLNGPPPMEIV----------------------------------------EGLRNPQLDKFLPKRKRQGAPYNPVTLQFVHSPIPDLHVPGSTELRA-LLQDLQQRLAKGEKLYVHCWGGRGRAGTVGACLLAEMY-DLSADECLERVQRAFDTRHD-----GGRRSPETEEQVAFVRGYVSALKN 249
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A812I4Z1_9DINO (Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812I4Z1_9DINO) HSP 1 Score: 94.0 bits (232), Expect = 2.700e-16 Identity = 76/274 (27.74%), Postives = 111/274 (40.51%), Query Frame = 1
Query: 445 KNHHFAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRL 1266
K F+E ANWL+PG +++G+YP P T Q L +L+ G+T CLQ E+PPQ + PAD F F Y A + + L F H PI DLS + E L+ LV EL + + +V ++HCW GRGR+G++A+CLLG ++ E++A + L V Y +RG+ A + SP+T EQ + V+L
Sbjct: 43 KPQRFSEHANWLLPGHLMIGRYPYLNPVYC----TSQREAVEQLHGLLKVGITTFVCLQTEIPPQVGPASEEWPADGVPVTGFPGRFLPYAAKAQSLMPD-----------------------------------------------------------------------LQFMHCPIQDLSTPRSRE-LSELVGELMQRMEANEVIYLHCWGGRGRSGVVAACLLGSMFGEMTAAECLEMVQCGYSSRGSKADVGALAKSPQTDEQRQFVKL 240
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: E1ZPG6_CHLVA (Protein-tyrosine-phosphatase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPG6_CHLVA) HSP 1 Score: 91.7 bits (226), Expect = 2.730e-16 Identity = 88/298 (29.53%), Postives = 120/298 (40.27%), Query Frame = 1
Query: 394 AFDLPKLVPIEDEDLVFKNHH----FAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVRLFFK 1275
A LP+L P+++ N+ FA+ ANWLVPG+V+LG+YP P+ + + + L +L+ GVT CLQAE+P Q G GF YR A R + A + L F HFPI DLS E + L L+ EL + G+ ++HCW GRGR GL+ + LL +LY LSA+++L RV R + TR R SPET EQ VR F +
Sbjct: 87 AVPLPELAPLDE------NYESACAFADFANWLVPGRVMLGRYPFVEPSRCRS----RDVGEEQLRRLLKAGVTTFVCLQAEIPEQGAMRICG-----------VDGFVPYRAPATLLASALSPPPSMEEVAALRTPELDRYLPPRRH-------------------------RAAWQSRARIQLD--------FCHFPIVDLSIPE-ADGLRLLLAELSQRLERGERLYVHCWGGRGRAGLVGATLLAQLYG-LSADEALERVQRSFDTRQD-----GGRRSPETDEQHAFVRAFVE 323
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A812V6G0_SYMPI (Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812V6G0_SYMPI) HSP 1 Score: 89.7 bits (221), Expect = 2.840e-16 Identity = 77/279 (27.60%), Postives = 116/279 (41.58%), Query Frame = 1
Query: 457 FAERANWLVPGKVLLGKYPGQIPADLATGPTVQIARDRVLDIVLRGGVTDLYCLQAELPPQDDESQWGPPADKDDSGMFFSGFRAYRGDAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXGRGTGEGAAEVVLGARGEEGLAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGT-VAIGKSSRVSPETPEQEEQVRLFFKQVLNS 1290
F+E ANWL+PG +++G+YP P + Q D L +L GVT CLQ+E+PPQ P + G F F Y A ++ L F H PI DL+ ++ E L+ LV +L + +G+V ++HCW GRGR+G++A+CLLGR + L + L V Y +RG+ + IG ++ SP+T EQ + V+L+ Q +S
Sbjct: 44 FSEHANWLLPGHLMIGRYPYLNPVYCMS----QQDADAQLRSLLDAGVTTFVCLQSEIPPQIGAGAVWPKSGVPVRG-FAGSFMPYAAKAQRLAP---------------------------------------------------------------------DKPLQFLHCPIQDLNTPQSQE-LSELVADLSQRMEAGEVIYLHCWGGRGRSGVVAACLLGRFF-NLPPAECLRVVQDGYSSRGSELDIGALAK-SPQTDEQRQFVKLWLTQTQSS 245
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Match: A0A7S1WRL8_ALECA (Protein-tyrosine-phosphatase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WRL8_ALECA) HSP 1 Score: 84.3 bits (207), Expect = 1.680e-15 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 958 LAFHHFPIPDLSPAENTEILAGLVDELEALVRSGKVPFIHCWAGRGRTGLIASCLLGRLYPELSAEQSLNRVDRYYRTRGTVAIGKSSRVSPETPEQEEQVR 1263
+ F H PI DL + L+ L++ +E L+ SG+V ++HCW GRGRTG++A+CLLG+L+P+ SA+ L+ V Y +RG +SP+T EQ VR
Sbjct: 27 VKFVHEPITDLGVPSPRQ-LSTLLNHVEGLLHSGEVVYLHCWGGRGRTGVVAACLLGKLFPDRSADDCLDLVQAAYSSRGDDRDVGQLALSPQTREQRNFVR 127 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17697.1 >prot_Ecto-sp6_S_contig85.17697.1 ID=prot_Ecto-sp6_S_contig85.17697.1|Name=mRNA_Ecto-sp6_S_contig85.17697.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=396bp MSTPASHGIAGWVVPNANMNVKFNFVDGRSPPSCSSSVDGVKRLGGRGCNback to top mRNA from alignment at Ecto-sp6_S_contig85:596516..601632+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17697.1 ID=mRNA_Ecto-sp6_S_contig85.17697.1|Name=mRNA_Ecto-sp6_S_contig85.17697.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5117bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:596516..601632+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:596516..601632+ >mRNA_Ecto-sp6_S_contig85.17697.1 ID=mRNA_Ecto-sp6_S_contig85.17697.1|Name=mRNA_Ecto-sp6_S_contig85.17697.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:596516..601632+ (Ectocarpus species6 EcLAC_371)back to top |