mRNA_Ecto-sp6_S_contig85.17672.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig85.17672.1
Unique NamemRNA_Ecto-sp6_S_contig85.17672.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: D8LRT6_ECTSI (Pyridoxamine 5'-phosphate oxidase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT6_ECTSI)

HSP 1 Score: 572 bits (1474), Expect = 7.930e-206
Identity = 294/297 (98.99%), Postives = 294/297 (98.99%), Query Frame = 1
Query:    1 MVSAAVASSPTEAAGATDDERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILRA 891
            MVSAAVASSPTEAAGATD ERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTP EANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIV KINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILRA
Sbjct:    1 MVSAAVASSPTEAAGATDGERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPREANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVSKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILRA 297          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A836CD40_9STRA (Pyridoxamine 5'-phosphate oxidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD40_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 9.070e-138
Identity = 200/290 (68.97%), Postives = 233/290 (80.34%), Query Frame = 1
Query:   19 ASSPTEAAGATDDERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            A++P       +D++AIILS  ERARTVTH+A SG+LCT S + +   +G+PFGSHVDYVLD QGWPIFLLAEASLHT+NIKA+N+VSLLCQTP   + QP AA++RVTLVG +  ++D+DELIQLKA+F L H YA QL  SPRF FYKL+P+K+YYVGG+GVLSKWL V EYE A+PDILAD A+ I  KIN  KQ DL  VCK FLNK   D V +TTVDRLGLD+RV    LTDE+RIGF Q VSSVEDAKSEIVK+FQEAWEKE GFEWEDQGPP+QRYAEDILR
Sbjct:    4 AAAPQTKVNGAEDDKAIILSTVERARTVTHIASSGSLCTYSLTDDPELQGAPFGSHVDYVLDTQGWPIFLLAEASLHTKNIKANNKVSLLCQTPPAESSQPAAAMSRVTLVGYMETLEDEDELIQLKATFPLTHAYAAQLVDSPRFVFYKLRPEKIYYVGGYGVLSKWLDVQEYELAKPDILADNAARIAAKINKAKQGDLALVCKQFLNKPRVDNVVLTTVDRLGLDIRVTDGALTDEYRIGFTQTVSSVEDAKSEIVKVFQEAWEKEQGFEWEDQGPPVQRYAEDILR 293          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A4D9D6I7_9STRA (DUF2470 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I7_9STRA)

HSP 1 Score: 300 bits (769), Expect = 1.470e-97
Identity = 151/277 (54.51%), Postives = 206/277 (74.37%), Query Frame = 1
Query:   61 RAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQP-QAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            R I LS++ERARTVT+VA + TL T S +       +PFGS+VDY+LD++GWP+ LL+E SLHTQNI+ + +VSL  Q P         AAL+RVTL+G+IV V+ + EL  ++ ++S+VH+Y+++L +SP+F F KLKP++VY+VGGFGV SKWL VS+YE A PD+LA E + IV +IN   + +L+ +C+HFL     D V  TTVDRLG+DLRV   +LTDE+R+GFR+ V S EDAKSE+VK+FQEAWE+E+ + W D+ PP+ RYAEDILR
Sbjct:   96 RPIRLSLSERARTVTYVATAATLGTFSETAS-----TPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAE-ELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILR 366          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A6V2T0J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T0J3_HETAK)

HSP 1 Score: 298 bits (763), Expect = 6.700e-97
Identity = 153/276 (55.43%), Postives = 198/276 (71.74%), Query Frame = 1
Query:   73 LSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQ-AALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFR--QPVSSVEDAKSEIVKIFQEAWEKENGFEW-EDQGPPIQRYAEDILR 888
            L+ TE+ARTVTHV  SGTL TL ++ EA   G PFGSHVD+VL+EQGWP+FLL+E S+HT N KA N VSL  Q P     +P  A L RVT+ G++  + D DELI L+ +FS+ H YA++L +SP F FYKL+P+ +YY+GGFGV + W+ V+EYE A+PDILA E+ ++V ++N    EDL T+C  FL   +P    VT +DRLG ++RV +   TDEFRIGF   Q V SVEDAKSEIVK+FQEAWEK+ G EW +D  PP+++YA DILR
Sbjct:   77 LTKTEKARTVTHVCTSGTLATLGANAEA--RGFPFGSHVDFVLNEQGWPVFLLSEQSMHTLNFKAQNSVSLFAQQPAAQEAKPHPATLPRVTITGSMEKITDMDELILLRPTFSVAHGYAEKLVESPVFAFYKLRPESIYYIGGFGVNAAWVEVAEYEAAKPDILAYESPAVVARLNKKHAEDLATLCSQFLGVKSPQEATVTNLDRLGFNVRVSSGKETDEFRIGFNPLQQVFSVEDAKSEIVKLFQEAWEKKEGNEWAQDYQPPVEKYASDILR 350          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A482S023_9ARCH (DUF2470 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S023_9ARCH)

HSP 1 Score: 285 bits (729), Expect = 7.150e-93
Identity = 137/268 (51.12%), Postives = 192/268 (71.64%), Query Frame = 1
Query:   85 ERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            ++ARTVT++  SGTLCT S   +   +G PFGS+VDYV+DE+GWPI LL E SLHTQNI+ ++ VSL CQ P     Q  AAL+RVT++G +  V  + EL+ LK +F ++H YA+Q+  SPRF FY+++P K+Y+ GGFGV + W+ V +YE A PD+LA E  +++ ++N  KQ +L  +C++FL     D V +  +D+LG+DLR+K  +LTDE+R+GFR PV S EDAKSE+ K+FQEAW++E G  + D  PPI +YAEDILR
Sbjct:    2 DKARTVTYICTSGTLCTSSVMEDV--QGVPFGSYVDYVIDEKGWPILLLGEQSLHTQNIRKNSAVSLFCQLPRSQQSQTTAALSRVTIMGQVHPVPPE-ELLALKMAFIIIHPYAEQIADSPRFHFYRIQPQKIYFSGGFGVQATWVNVPDYEAARPDVLAQEVPTVLSRVNLDKQAELLLMCRYFLGLDDVDLVRIQAIDQLGIDLRLKRGELTDEYRVGFRHPVRSGEDAKSELTKLFQEAWQREQGCFFADDLPPITKYAEDILR 266          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A7S3M5B1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5B1_9STRA)

HSP 1 Score: 277 bits (708), Expect = 2.410e-88
Identity = 137/272 (50.37%), Postives = 195/272 (71.69%), Query Frame = 1
Query:   76 SITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKAR-DLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            SI ++ART+TH+  SGTLCT S + E   EG PFGS+VD++ DE GWP+ L++  SLHTQNI+ S  VSL CQ P +   Q  A+L+RVT++G I    ++D L  L+ +F+L+H Y++QL  SP+F   +LKP+K+++ GGFGV + W+ V EYE+A  D+LA+E   ++ K+N  KQ +L  +CKHFL     + V V T+DRLG+DLR+K+  DLTDE+R+GFR  V+S E+AKSE+VK+FQEAWE+E G  + D+ P + +YAEDI+R
Sbjct:   89 SIIDKARTITHICTSGTLCTTSVAPEM--EGFPFGSYVDFITDENGWPVLLISNQSLHTQNIQHSPAVSLFCQLPKQTATQASASLSRVTIMGHIERTPEED-LPALQMAFTLIHPYSEQLFNSPKFSLLRLKPEKIFFSGGFGVSATWVDVKEYESARADVLANEMPIVLAKVNLEKQGELLLLCKHFLGLQDVEVVRVQTIDRLGMDLRIKSGGDLTDEYRVGFRHAVNSAEEAKSEMVKLFQEAWEREQGCYYSDELPLVTKYAEDIIR 357          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A6U4F2Y4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F2Y4_9STRA)

HSP 1 Score: 271 bits (694), Expect = 8.990e-87
Identity = 143/285 (50.18%), Postives = 195/285 (68.42%), Query Frame = 1
Query:   49 TDDERAI--ILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATP---DTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            T+DE  +   LS+ ERAR+VT  A SGTLCT+S  GE   EG PFGS+VDYVLD  G P+ LL E S+HT+N+ A  RVS+L Q        P AA  R T+ G I  VDD +E++Q + ++SL H+YA+Q+ +SP F FYK+ P++VYYVGGFGVLS+W+ V +Y+ A+PDILAD+ + +V K+N    E+L  +   +L +       ++ VTTVDRLG+DLRVK  D TDE+R+GFR   +++EDA+SEI K+FQEAWE  NG+   D  PP++  A+D LR
Sbjct:   46 TEDETGVRCSLSVPERARSVTQAAKSGTLCTIS-QGEL--EGMPFGSYVDYVLDNDGHPVLLLNEQSMHTRNMLADGRVSMLVQLKSTRREIPAAAQPRCTVAGRIAKVDDKEEILQNRVTYSLAHSYAEQVIESPSFSFYKIIPERVYYVGGFGVLSEWVDVQDYQQAQPDILADKTADLVDKVNEVNGEELPNLYTSYLAEEGDGELQSIRVTTVDRLGMDLRVKHGDYTDEYRLGFRMAATTLEDAQSEITKLFQEAWEVANGYYEGDTSPPVEVLAKDALR 327          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A6U4F8L6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F8L6_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.130e-85
Identity = 138/271 (50.92%), Postives = 187/271 (69.00%), Query Frame = 1
Query:   85 ERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATP---DTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 888
            ERAR+VT  A SGTLCT+S  GE   EG PFGS+VDYVLD  G P+ LL E S+HT+N+ A  RVS+L Q        P AA  R T+ G I  VDD +E++Q + ++SL H+YA+Q+ +SP F FYK+ P++VYYVGGFGVLS+W+ V +Y+ A+PDILAD+ + +V K+N    E+L  +   +L +       ++ VTTVDRLG+DLRVK  D TDE+R+GFR   +++EDA+SEI K+FQEAWE  NG+   D  PP++  A+D LR
Sbjct:   49 ERARSVTQAAKSGTLCTIS-QGEL--EGMPFGSYVDYVLDNDGHPVLLLNEQSMHTRNMLADGRVSMLVQLKSTRREIPAAAQPRCTVAGRIAKVDDKEEILQNRVTYSLAHSYAEQVIESPSFSFYKIIPERVYYVGGFGVLSEWVDVQDYQQAQPDILADKTADLVDKVNEVNGEELPNLYTSYLAEEGDGELQSIRVTTVDRLGMDLRVKHGDYTDEYRLGFRMAATTLEDAQSEITKLFQEAWEVANGYYEGDTSPPVEVLAKDALR 316          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A7S1GRF9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRF9_CYCTE)

HSP 1 Score: 247 bits (630), Expect = 1.730e-77
Identity = 141/296 (47.64%), Postives = 192/296 (64.86%), Query Frame = 1
Query:   67 IILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIK-------ASNRVSLLCQTPLEANGQPQAALARVTLVGAIVDVDDDD--ELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATP-DTVAVTTVDRLGLDLRVKARD-------LTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWE--DQGP----PIQRYAEDIL 885
            I L++ E+ARTVT V  SGTLCT+SS    G +G+PFGS+VDYVLD+ G+P+ L+ E S+H+ NI+           V+L  Q      GQ    ++R +L G I  +D     ++  ++  +S+ H YADQ+  SP+F FY+L P ++Y+VGGFGVL+KW+ V EY++A PDILA EAS IV ++N   +EDL+    H LN  T  + V VT VDRLG+D+RV ++        LTDEFRIGFR PV SVEDAKSE++KIFQEAWEK NG+ W+  D+ P    P+ + A D L
Sbjct:   10 IRLNVNEKARTVTSVCTSGTLCTVSSYD--GIDGAPFGSYVDYVLDDNGFPVLLMNEMSMHSMNIRDNVDSDGGKRMVTLFTQLTGNTKGQD---VSRCSLTGMIEQIDPKTAMDIDAIRMRYSITHAYADQVMDSPKFGFYRLVPSRIYFVGGFGVLAKWVDVEEYQSAAPDILAMEASEIVGRLNRDHKEDLRLTATHLLNVETEIEKVQVTNVDRLGVDIRVTSQKGARRNKLLTDEFRIGFRIPVLSVEDAKSEVLKIFQEAWEKGNGYTWDADDELPGSTVPVMKIAADDL 300          
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Match: A0A6S8YP63_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YP63_9STRA)

HSP 1 Score: 245 bits (626), Expect = 6.110e-76
Identity = 144/321 (44.86%), Postives = 201/321 (62.62%), Query Frame = 1
Query:   10 AAVASSPTEAAGATDDERA------IILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASN----RVSLLCQTPLEANGQPQAA----LARVTLVGAIVDVD--DDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKA-------RDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEW--EDQGP----PIQRYAEDIL 885
            AAV    T AA +TD+         I L++ E+ARTV  V  SGTLCT S+    G EG+PFGS VDYVLD+ G+P+ L+++ S+HT+NI  +      V+L  Q   ++N    A     ++R +    +  +D  D ++   ++  +S+ H YADQ+  SPRF FY+L P  +YYVGGFGVLSKW+ V++Y+ A PDILA++ASSI+ K+NN  +EDL     H L+    + + VT VDRLG+D+RV +       + +TDEFR+GFR PV SVEDAKSE++K+FQEAWEK  G  W  E++ P    PI + AED L
Sbjct:   54 AAVNGDATAAATSTDETNDASEQINIRLNVNEKARTVLSVCTSGTLCTTSN--HDGIEGAPFGSFVDYVLDDDGFPVLLMSDLSMHTKNILDAGLDKAMVTLFAQIDDKSNANQNAEKGQDVSRCSFTAKVQKIDPKDAEDYDSIRMKYSIAHAYADQVMDSPRFDFYRLIPQAIYYVGGFGVLSKWVDVNDYQKAVPDILANDASSIISKLNNEHEEDLFLTATHLLDVKDVEKIRVTGVDRLGMDIRVTSFQGARRNKMITDEFRVGFRIPVISVEDAKSEVLKVFQEAWEKGKGLTWGEEEEVPGSTVPIMKIAEDSL 372          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT6_ECTSI7.930e-20698.99Pyridoxamine 5'-phosphate oxidase-related n=1 Tax=... [more]
A0A836CD40_9STRA9.070e-13868.97Pyridoxamine 5'-phosphate oxidase-like protein n=1... [more]
A0A4D9D6I7_9STRA1.470e-9754.51DUF2470 domain-containing protein n=2 Tax=Monodops... [more]
A0A6V2T0J3_HETAK6.700e-9755.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482S023_9ARCH7.150e-9351.12DUF2470 domain-containing protein n=1 Tax=archaeon... [more]
A0A7S3M5B1_9STRA2.410e-8850.37Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6U4F2Y4_9STRA8.990e-8750.18Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4F8L6_9STRA4.130e-8550.92Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1GRF9_CYCTE1.730e-7747.64Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6S8YP63_9STRA6.110e-7644.86Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:356391..361309 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score573.5
Seed ortholog evalue5.5e-161
Seed eggNOG ortholog2880.D8LRT6
Model size894
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.Pyridoxamine 5'-phosphate oxidase
EggNOG OGs2RYPS@2759,COG0748@1
Ec32 ortholog descriptionPyridoxamine 5'-phosphate oxidase-related
Ec32 orthologEc-08_002370.1
Cds size894
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17672.1prot_Ecto-sp6_S_contig85.17672.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig85 356391..361309 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350481.8135767-CDS-Ecto-sp6_S_contig85:356390..3565251682350481.8135767-CDS-Ecto-sp6_S_contig85:356390..356525Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 356391..356525 -
1682350481.8226779-CDS-Ecto-sp6_S_contig85:358435..3585861682350481.8226779-CDS-Ecto-sp6_S_contig85:358435..358586Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 358436..358586 -
1682350481.8310277-CDS-Ecto-sp6_S_contig85:358845..3589101682350481.8310277-CDS-Ecto-sp6_S_contig85:358845..358910Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 358846..358910 -
1682350481.839436-CDS-Ecto-sp6_S_contig85:359195..3592701682350481.839436-CDS-Ecto-sp6_S_contig85:359195..359270Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 359196..359270 -
1682350481.847692-CDS-Ecto-sp6_S_contig85:359600..3596701682350481.847692-CDS-Ecto-sp6_S_contig85:359600..359670Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 359601..359670 -
1682350481.8561504-CDS-Ecto-sp6_S_contig85:359870..3599471682350481.8561504-CDS-Ecto-sp6_S_contig85:359870..359947Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 359871..359947 -
1682350481.8643787-CDS-Ecto-sp6_S_contig85:360262..3603731682350481.8643787-CDS-Ecto-sp6_S_contig85:360262..360373Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 360263..360373 -
1682350481.8727221-CDS-Ecto-sp6_S_contig85:360849..3609641682350481.8727221-CDS-Ecto-sp6_S_contig85:360849..360964Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 360850..360964 -
1682350481.880877-CDS-Ecto-sp6_S_contig85:361214..3613091682350481.880877-CDS-Ecto-sp6_S_contig85:361214..361309Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 361215..361309 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig85.17672.1

>prot_Ecto-sp6_S_contig85.17672.1 ID=prot_Ecto-sp6_S_contig85.17672.1|Name=mRNA_Ecto-sp6_S_contig85.17672.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=298bp
MVSAAVASSPTEAAGATDDERAIILSITERARTVTHVADSGTLCTLSSSG
EAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTP
LEANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSP
RFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVFKIN
NGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGF
RQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILRA*
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mRNA from alignment at Ecto-sp6_S_contig85:356391..361309-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig85.17672.1 ID=mRNA_Ecto-sp6_S_contig85.17672.1|Name=mRNA_Ecto-sp6_S_contig85.17672.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4919bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:356391..361309- (Ectocarpus species6 EcLAC_371)
ATGGTGTCGGCTGCTGTAGCGTCTTCTCCCACAGAAGCTGCCGGCGCCAC CGATGACGAAAGGGCAATTATCCTATCGATCACCGAGAGAGCCAGGTAGA TACTCACCAGTGCGCTCCGAATTCTAGAAAAACCGTGATATTCGGCTTGA CCAACTATAATAATGTTATCTCGATGTGTTTTTGGAGCAGCCTGATGCCA ACCGGCAGAACGGACTGCGACATTTCAATCGTTCGTGATACACACATCAT TTTTTCGTGTCGCAAGGCTTGCTCGATCCTACAGTCACGTTAGAACGCTC GTAACTCAACACATGCCGCGCTCTGTTTTATTCTGTTCTACGCAGGACGG TGACACATGTTGCTGACTCGGGCACGTTGTGTACACTGTCGAGCAGTGGA GAAGCCGGACCGGAAGGTTCCCCTTTCGGCAGCCACGTTGACTACGTCCT CGATGAGCAGGTTAATCTGTGTGACTGGGTCTGCGGGAGGTGTCTTTGAA AAATCACGATGCCAATGTACTCCTTCAATCGTAACCAGGTCTCACGTAAT CTCATCGCCTTATGCGAACATGATCAAGCACGAGCACAAGGAAAGCGTCA ACGAAACAGTACTTTCGCCGAGTGTAATCATCGGTCGGAATTTGGCACTG GGGGCGCGCGGAGAAAAAGTGGCCAGTCGAGAAGTCTAAATAGTGATGGG AGGGTACCTCGTAAACTGTACCGCACAGCCCGAAGATACATCATGTATAC TCTGGGTATCGGGACAAGTAGATGCGATTTCCATGCCCGACCAGCAGGTG CCCCCATAGCGGCACGTCCGCGACGTTTCGAAGACCGTTGGCGTACGTCC TAGTCGGCTCGTGTGTGTGTGTGACCTCCCCTTAAATGTGCTTGGACTTC TCTCTTCCTTCGTGCAACATCACCGTGTGTCGGCAGGGCTGGCCAATTTT CCTTCTCGCGGAAGCATCACTCCACACCCAAAACATCAAAGCCAGTAACA GAGTATCGCTGCTATGCCAAACTCCTCTCGAAGCCAATGGTCAACCGGTG AGCCCGAGGTTTTGTTGAGCTGGTCGGTAGCCGCTTGCTGGGTGGCGTGA CATGTGTTCCATGCGTCCGATCTGATCAATCAAAATCGCTAACGCCATAT CCTTTTGGTGTAGAGGTGCACAGTGCAGACAAACCACTAACTACACTGGG GTCGCAGCGTGCACTTGTTTATGGTTTGTGTACGCCCTGGTGCGCAACTG CAACACACACGTACCGTCGGTAGAACACGAGCTTCTTTCTGGCGCTCACA CTGCGAGTATGAATGGCTGTTCTCTCTGCGCAACCTTGTTCGTTTGCCCA ACACGTTGGCAGCAAGCAGCCCTGGCGCGAGTGACCCTTGTTGGTGCTAT CGTGGACGTGGACGATGACGACGAACTTATCCAACTCAAGTGAGAGCTTG CGCGAATCACACGTGCCATAATATGTGGTATGGTACCTATTAGCACATAC CGAGGGGGCTGGCGAATGGCCTATCACCGAAAAAATCAAGTCTGCCACGT TCTCGACTTGTGGGCTCTTGTTCCCGTGTCTTCCTGGTATACTGTATGCT CCTCATATTTTTGGCCTCATACGTGGCCCATTTTCCCAGGGCTTCATTCT CCCTGGTGCACACTTACGCTGACCAGCTGACGCAGTCACCGAGATTCAAG TTTTACAAGGTATGTGCCTGGGCAGCGGCAGCAGTACGTGGGGGCATGGA TGTCACGTCGAGGTTCTTTACATGTTTTGACGCAGTGGGATCAATTGTAT CCTGCTCGCCAGTGAATTTGAGCCCTAATCACCGCTTCAGACCATTCTAG TCCTCTCAATTGGGGTATATGTGAACTTGTGGTGCTTGCTGCTCTACTGC CAAGACAGCACTCGGAACTCATTTGGCATGTATTTGCGATCTCTTGTTGC TACTTTGGGACGACGTATTTGGGGCTACTGCTGTGGGTCACTATCTCACC GTCGTCTCATATTCATCACACATTTGCACCTCGTTGAAGCTCAAGCCGGA TAAAGTGTACTACGTGGGCGGGTTCGGAGTGTTGTCCAAGTGGCTGCCTG TCAGCGAGTACGAGGTGAGTTGAGCAGTTTGCTGTGGACTACGTCGGTAA AAACCCGATGGTGAGCAGTCCACACTGGTTTCTTTCAGCGTTGCGTTTTC GTTTGATGTGATGGCGCGCGTGGAGTGAAAATTATTCCTGCTCTGTTCGA TTGCATGCCGGAGCACAACACTATTTGCCGGTTCGCGCATCGCGGCCGTT GTAGTTGAACTTCAACCGAGAGTATGCACACATGCAGAGGTTGGGCTGTG GAAGCGTTCTTTGAAAGAGAATGTTCGTTTGTTTCTTGCTCCTTGGCAGA CGGCGGAACCAGACATTTTGGCAGACGAGGCCTCGTCAATTGTGTTCAAG ATCAACAACGGCAAGTGAGTGAAACCACGCCGGAGGTGTATTTCGTTGGA GTGACCAAACCTGGTGAGCACGAGTTCAAAGGCCCCAATTGACACCAAAA CTGTGGCGTCCGCGTCGTCTTGTGTCCCGGAATGAGAATTCCCCTCTGCC AAGTATTTCAAAGGTTTTGTGAATCCCTCGCGCCACCAAATGTTTAGCAC TGCAGTTGCTGCTTATCTGTGGTCAAGATACGAAACATTTCATGCCGTTG CGTCCGTATTCTTTGAAATATAGGCAAGAGGACCTTCAGACTGTCTGCAA GCACTTTCTCAACAAAGCCACCCCGGACACGGTAGCAGTCACGACCGTGG ACCGTCTCGGGTTAGACTTGAGAGTCAAAGCCAGGGACTTGACGGATGAG TTCAGGATCGGTTTCCGGCAACCGGTGAGCAACCCGCGTCTTTGTTGTTT GTCGTCCCCTTTTCGTTGTCTAGTGCTTTTATTTTCTCGATCGCTGTGGC CACGTGCTCGCTGCTTTGTTACTTGCAAGCTTTGCTGCTGTGCACTGTAT TGTATCTTGTTGCAATTTCGTAATTTCCTCTCATTTCATCGGGTCGTGGT CGACGTCATTGTCGCTGCTGCTGCTGCTGCTGTTGCCGTCTTGACGTTCT AAACCTTCGTGACCTCTATCCAGTACCTGTTCTTCTCCTACTGTTGAAGG CAAAGAAACGAATTCCATCATCACAATCCTATCCTAACTCAAGAGAGACG TGAGCGGAAAATCACAGACTTGATATGCCACTGCGATGGATCCACGTTAG ATATGGGAAATCAACCTAGGCCGTTTTTACCCAGTCGGAATTGGAGCTTG GAAATGTGGCGTTCCCGGCTCCGACAAAACCAACAGATTGCTTCTTCTTA CGGCTTCTAATGCTGTAGTCGATTTGATTTTAGCCTATCGACAAAAAAAA TTAATTGTTGAGAAGTGTTATCTGTTCGTTTCGCTTGCTACACCGGTTTG GTTTATTGGGTATCCCTCCCGACTGGCTGAAGCAACAGCACAACAAAGCC TCCCCGCGCAGCTGTTCGTATGGTGCTTGTTGTGGGGTGGTTATCAAGAG ACCGCGAGGCGCTGGGAGGTTGAGCATTGGATTTGTCGTTGGGTCGACTG CTGTTGGCAAAAAAACACATTCCACCTCTGGGTACAACATTTTTGCCTTG TCACCGGTTTGAATTGTAACCACCTTGTCTTCAACTGAACGAATCTACAC GTATTATATGCGTATGTATGACAAAGCCAGCCGCCCGTAGCTGTGTTCAA GGTGATTTTTGTGTGGCGGCTATTAGAGACTAAAAGAGAGGGCAAGGCGC TTGGGGGGCTGATATTGTAAATTGCCGAGGGTCGAGTACAGTTCGGAAAA AGACCTATCGCTGCTGCTGGCGGCTGCTTGCCTTGTCGTTGGTTTTAATA TGACGACATCCCAAATCTTCCACCAGTGACGAAAGCCCGCTGAGCTGTGT GTATGGTATCTATCGTGTGGTCGTGGGCGTTATTTGCCCTTTGCTCTAGC GATTGAAGTTTGGCAGTCACCGTCTTGTTGCGAGATGTTTTTGCGGAGCC CCCAGTTAAACTTTTCCAACACCGCACAACAACTCTCGCGTGAACTTATT TCCAAGATGTCCAGTCAGGAATGGGATCTGGAAAGTGTTTTCAATGATAT CCATATTTCCAACTGTTTATTTGTCAATTTTTAGGCCTAGCCAAAGAGTC GCATGTCGAAGTTGCATTTCCGAATGGGTAAAAAACGGCCTTGTCCGGAC AGACACATGGGTTGGGTCGTGGTGTACGTAAAGGCTGTTTTTACAGGGCG GTTATTTTTGTAACCCTGCGGGTCCTCGTACGTGTACCAGGTCTTTAATG TGCGTTCGATTAATAAGAGCACAGGAGGATGTGGGGAGTTCAATTACTTA CACTGGTTGAACCATTGATTGCCGGACTATCCTTACTTTTTTTTTTATCG ATTTACGATTTTTTAGTCTGTGACAAAATAAGCATGTAGCGATATCCTGG CTCTGGCTGGGCTTGAGTTGCCCCTTCGGGTGCCCTCCGCTCTTTTTATC ATTGGCCTCTTGGGTTCTGGCGGGAGGGCTTGCATGGGTCTTCGTTGTGT TTTAATAATCGGAAGATCTAGCCATTTCAGTTGGTGACTCGTGGAACTCG CACAGGTGTCTTTGAGATCGCACAGGTGTCTTTGATATTACAACAGACCA GGGAGATTGACGTCACTGACACGAATCTTGGCGTATTGGACCGCAACATG CTCATCCGGATCGTGACTATAAATATGGGAACAGGTTTCGTCGGTAGAGG ACGCCAAGAGCGAAATCGTCAAGATTTTCCAGGAAGCATGGGAGAAGGAG AACGGCTTTGAGTGGGAGGACCAGGGACCGCCCATCCAACGATACGCCGA AGACATTTTGAGAGCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:356391..361309-

>mRNA_Ecto-sp6_S_contig85.17672.1 ID=mRNA_Ecto-sp6_S_contig85.17672.1|Name=mRNA_Ecto-sp6_S_contig85.17672.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:356391..361309- (Ectocarpus species6 EcLAC_371)
ATGGTGTCGGCTGCTGTAGCGTCTTCTCCCACAGAAGCTGCCGGCGCCAC
CGATGACGAAAGGGCAATTATCCTATCGATCACCGAGAGAGCCAGGACGG
TGACACATGTTGCTGACTCGGGCACGTTGTGTACACTGTCGAGCAGTGGA
GAAGCCGGACCGGAAGGTTCCCCTTTCGGCAGCCACGTTGACTACGTCCT
CGATGAGCAGGGCTGGCCAATTTTCCTTCTCGCGGAAGCATCACTCCACA
CCCAAAACATCAAAGCCAGTAACAGAGTATCGCTGCTATGCCAAACTCCT
CTCGAAGCCAATGGTCAACCGCAAGCAGCCCTGGCGCGAGTGACCCTTGT
TGGTGCTATCGTGGACGTGGACGATGACGACGAACTTATCCAACTCAAGG
CTTCATTCTCCCTGGTGCACACTTACGCTGACCAGCTGACGCAGTCACCG
AGATTCAAGTTTTACAAGCTCAAGCCGGATAAAGTGTACTACGTGGGCGG
GTTCGGAGTGTTGTCCAAGTGGCTGCCTGTCAGCGAGTACGAGACGGCGG
AACCAGACATTTTGGCAGACGAGGCCTCGTCAATTGTGTTCAAGATCAAC
AACGGCAAGCAAGAGGACCTTCAGACTGTCTGCAAGCACTTTCTCAACAA
AGCCACCCCGGACACGGTAGCAGTCACGACCGTGGACCGTCTCGGGTTAG
ACTTGAGAGTCAAAGCCAGGGACTTGACGGATGAGTTCAGGATCGGTTTC
CGGCAACCGGTTTCGTCGGTAGAGGACGCCAAGAGCGAAATCGTCAAGAT
TTTCCAGGAAGCATGGGAGAAGGAGAACGGCTTTGAGTGGGAGGACCAGG
GACCGCCCATCCAACGATACGCCGAAGACATTTTGAGAGCGTAG
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