mRNA_Ecto-sp6_S_contig85.17663.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig85.17663.1
Unique NamemRNA_Ecto-sp6_S_contig85.17663.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: D8LRS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS8_ECTSI)

HSP 1 Score: 836 bits (2159), Expect = 3.520e-304
Identity = 448/463 (96.76%), Postives = 449/463 (96.98%), Query Frame = 1
Query:    1 MGHRRLVLLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSAKASRSSRPSRRDIDEDEQEFQGWDGETKKGTRRSSSSKSSRAARDDGSVGRRVRPSSTPGSSRSSSRYQESGTSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVAQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLASVTQADGQQGAEAE 1389
            MGHRRL LLGLAVVVLFAVDGAAAASKGAPRAGSQQRRS KASRSSRPSRRDIDEDE+EFQGWDGETKKGTR         AARDDGSVGRRVRPSSTPGSSRSSSRYQESGTSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQ IASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAV QLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLASVTQADG QGAEAE
Sbjct:    1 MGHRRLALLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSTKASRSSRPSRRDIDEDEREFQGWDGETKKGTRXXXXXXXXXAARDDGSVGRRVRPSSTPGSSRSSSRYQESGTSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQ-IASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVVQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLASVTQADG-QGAEAE 461          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A835YKQ2_9STRA (ANTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ2_9STRA)

HSP 1 Score: 229 bits (584), Expect = 5.660e-65
Identity = 150/385 (38.96%), Postives = 214/385 (55.58%), Query Frame = 1
Query:  367 LVPSRRS-----PPKSSMLSGLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPR-SPNNPNKRILRKLWLRMTEGDYRTKL----------------KALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCK--------------------------------VDRKTLNT-ITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYK-EGRTPAPEAVAQLLTQYGKTQQALERYLTHFKK--IVRDRRLFEDNQVDPAALQVCLA 1347
            LVP+RR      P KSS+LSGLA+++  KA+SMQE +KGK  EWR I K  V  SS+ E+FM+Q+TWPDD  +D  +  D M++L++A + P   +P NP +R LRKLW RM+E D                     K+L ++HH  +DL  +A+ R R   ++MR E N K  NE+YF+  RIMDV + G PF+P +++Y+S+  +R T   GG K  ++ TL++KKT +  AV LL+ +D ++  G+                                   VDRK L T +T   +Q TA D++ LWR+Y  G+ RL +GG+   G   A +   +LL+ Y  T+ A+  YL   KK  +VRD   FEDNQV  AAL+ CLA
Sbjct:   96 LVPARRGKGRGPPAKSSLLSGLASSVLEKASSMQEASKGKAMEWRKIVKGKV--SSQFERFMLQLTWPDDVPVDPVFTTDMMHYLDTADDYPDEMAPTNPYRRTLRKLWARMSEKDXXXXXXXXXXXXXXXXXXXXXKSLMLVHHMGIDLGPDASMRARTHILRMRKEVNSKKGNEMYFQLQRIMDVNAVGEPFVPFIKAYASYAFKRATMFVGGLKV-VSQTLKAKKTQEGTAVELLQTIDAMLNQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRKELVTDLTRAALQYTAGDMLELWRVYAAGVQRLAEGGFAGAGGKGAKDGKQRLLSGYASTRSAVSAYLDQCKKMKLVRDLSKFEDNQVSDAALEQCLA 477          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: D7G759_ECTSI (Weakly similar Glutamic acid-rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G759_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.500e-8
Identity = 63/248 (25.40%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  412 GLAATMKGKAASMQEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRIL-RKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGL 1152
            G AA   G+A S+      K+     +  +  W     E  ++++TWPDD   D+  V   ++ +++   +   + N+   R+L RKLW +M+E D+RT  KA+ + H    DL  E +  ++    KM  E + K     YF+   +  V+  G  F   +  Y ++  +R  E      Q++ +  R +       V  L +  K I  G+ C+   +    +T   ++ TA DL  LWR +   L
Sbjct:  230 GTAAEAVGQAGSLAASTSQKLKREVKLVVSGSW-----ESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACR-YFDLDVLCRVSEEGEAFRSFVDRYGTYVFKR-AEGFNARFQELDTMQREE--GWENVVTTLAKAQKAIDLGVSCQPQPEEETELTVLCLRNTALDLHQLWRRFHSSL 468          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A835ZEZ8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.710e-8
Identity = 57/228 (25.00%), Postives = 102/228 (44.74%), Query Frame = 1
Query:  496 KTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRI-LRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEV--------YFE----PARIMDVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLY 1140
            K  ++ S   E  +++ TWPDD   D A V   +  + S   +   +  +   R+ LRKLW +M E D+RTK+K+  ILH    +L    +  ++    K+R E + +    V        YF+     A +    +    F   +RSY ++ LRR  +  GG  +++        +S    +++L +  K +   M C++     + +T   +QL   D   L+RL+
Sbjct:  202 KVKMFTSGTWETALLKATWPDDAPPDAALVGQIVYGVRSFRPDMDVTKQSAEHRVFLRKLWAKMREPDWRTKVKSCYILHRVLRELPPRDDAVLKKHMGKLRRERSKRPAGAVGGGGDRPRYFDLAAAVAEVGPAPADARTFGGFVRSYVTYVLRRSQQF-GGKFEELQGV--GPGSSYEHVISVLVKARKALEAAMACQISADQESEVTLLALQLVCMDAAKLFRLF 426          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A7S1UKU7_9STRA (Hypothetical protein n=3 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKU7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.920e-8
Identity = 65/270 (24.07%), Postives = 111/270 (41.11%), Query Frame = 1
Query:  514 SSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDV--TSSGMPFLPLLRSYSSFTLRR-------MTEVQGGPKQQIASTLRSKK--TSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTP----------APEAVAQLLTQYGKTQQALERY 1260
            SS++E+ M++ T PDD  +    V+  +                    +LRKLW +  E D+RTK+KAL ILH  + D + E    +  +  ++R  ++ K + + YF   +++ V  T     F   +  Y+ + L R         E+   P+    S+ R  K  TS       L     ++  G+ C++    +   T   ++  A DL+ L       L R +KG   +G  P          + E + + LT   KT   L+ Y
Sbjct:  228 SSELEQVMLKATRPDDTPVKGKHVERLVGVTYQVSARYDLYTG-----VLRKLWAKTAEKDWRTKVKALYILHRYSSDGAPEHKDALIKRLRELRRTSDPKRKGKKYFNKQQLLAVENTPENEAFRGFVGRYAHYVLARTQSFGGMFVEIGEAPRPPPKSSNRPPKPLTSTSLKQEHLVNAKMVLTAGLACQLKDDEVTENTAIAVERVASDLIALSSAVAMALNRALKGNSSDGSDPVLLKKWCEFYSEELLPRTLTMVKKTSPKLDPY 492          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A7S2EXR9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXR9_TRICV)

HSP 1 Score: 65.1 bits (157), Expect = 1.220e-7
Identity = 62/240 (25.83%), Postives = 106/240 (44.17%), Query Frame = 1
Query:  514 SSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIM--DVTSSGMPFLPLLRSYSSFTLRRMTEVQG-----GPKQQIASTLRSKKTSQPEAVALLR--RLDK---LICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPA 1197
            SS++E+ M++ T PDD  +    V+  +                    +LRK+W +MTE D+RTK+KAL +LH  + D + +    ++ +  ++R  T    R E YF   +++  D +   + +   +  Y+ + L R     G     G +   +S   S+ +++P   A LR   LD    ++  G  C +        T   ++  A DL+ L      GL R +KG   EG  PA
Sbjct:  104 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKVWAKMTEKDWRTKVKALYVLHRFSSDGAPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLAGDASPDNVKYRAFMARYAHYVLLRAQCFGGMFNEIGQEPPTSSKSSSRSSAKPITSAALRPEHLDAAQMILKAGTACALKDGEECENTCFCVERVASDLIGLTGAVASGLNRALKGKGAEGADPA 337          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A1Z5K193_FISSO (ENTH domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K193_FISSO)

HSP 1 Score: 62.8 bits (151), Expect = 8.500e-7
Identity = 60/237 (25.32%), Postives = 104/237 (43.88%), Query Frame = 1
Query:  514 SSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIM--DVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVAL-------LRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPA 1197
            SS++E+ M++ T PDD  +    V+  +      G  P     +    +LRKLW +M E D+RT +KA+ I+H  + D + E    ++ +  ++R  T    R + +F   +++  D T   + F   L  YS + L R T+  GG   +IA   +S K   P+ +         L     L+  G+ C++        T   ++    D++ L       L R +K    +G  PA
Sbjct:  226 SSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIG--PKFDIYDA---VLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELR-RTRDPKRKDKFFNTKQLLAGDTTPENVKFRAFLSRYSHYVLLR-TQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEECENTALAVERVVADMIGLCSAVAVALNRALKDDDLKGADPA 455          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A7S4VB79_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-6
Identity = 91/383 (23.76%), Postives = 152/383 (39.69%), Query Frame = 1
Query:  349 RSRGMELVPSRRSPPKSSMLSGLAA---------TMKGKAASMQEDAKGKVTE-----WRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMNFLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIM--DVTSSGMPFLPLLRSYSSFTLRR-------MTEVQGGP------KQQIASTLRSKKTSQPEAVALLRRLDKLICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAPEAVAQLLTQYGKTQQALERYLTHFKKIVRDRR-------LFEDNQVDPAALQVCLASVTQADGQQGAEAE 1389
            R RG  +VP       S+   GL+A         T++  A S     K K T+     +R I   T   SS++E+ M++ T PDD  +    V+  +                    +LRKLW +M E D+RT +KAL ILH  + D   +    ++ +  ++R  T    R E YF   +++  D T    PF   +  Y+ + L R        TE++  P      K+  A+  +   TS       L     L+  G  C +        T   ++  A DL+ L       L R ++G  +E + P  +A+ +   ++       E  L   KK+V+          LF  +++  +     L    Q +G++  +AE
Sbjct:  220 RGRGSNVVPYVGKEQPSTFTRGLSAIRDSIPDVATVRDAATSSITAVKDKSTKISSGIYREIKGLT---SSELEQVMLKATRPDDQPVKGKHVERLVGVTYQISGRYDIYDA-----VLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELR-RTRDPKRKEKYFNSKQLLEGDATPENQPFRAFMARYAHYVLLRAQCFGGMFTEIKENPSAPPSSKKPSAAAAQKPITSTSLRPEHLEASQLLLKAGCACALKDGEECESTALALERVASDLIGLNTAVAIALNRALRG--RESKGPVDQALIKRWCEFYS-----EELLPKTKKMVKKTSAKLDAYGLFLPSRMGASVAPELLKKGLQGEGEEEEKAE 586          
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Match: A0A448ZTH1_9STRA (ENTH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.630e-5
Identity = 62/240 (25.83%), Postives = 107/240 (44.58%), Query Frame = 1
Query:  514 SSKMEKFMIQMTWPDDGALDDAWVKDTMN--FLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDLSSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIM-DVTSSGMPFLPLLRSYSSFTLRRMTEVQGGPKQQIAS-----TLRSKKTSQPEAVALLR--RLDK---LICTGMGCKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTP 1194
            SS++E+ M++ T PDD  +     +  +   +  SA  +   +       +LRKLW +M E D+RT +KAL ILH  + D S E    ++ +  ++R   + K + + +     +  D +     +   L  Y+ + L R  +  GG   +IA+     T + K   +P     L+   LD    L+ TG+ C + +   N  T   ++  A DL+ L       LTR +K    +G  P
Sbjct:  228 SSELEQVMLKATRPDDTPVKGKHAERLVGVTYQISARYDIYDA-------VLRKLWAKMAEKDWRTTIKALYILHRFSADGSPEHAPALKARVRELRRTRDPKRKGKFFSSKLLLAGDTSEETAKYRAFLGRYAHYVLLR-AQCFGGMFDEIAAPSAKDTKKKKAAPKPITSTSLKADHLDAAKLLLETGLACVLKKGEENENTALAVERVASDLLGLTTAVTGALTRALKDDDLKGADP 459          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LRS8_ECTSI3.520e-30496.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YKQ2_9STRA5.660e-6538.96ANTH domain-containing protein n=1 Tax=Tribonema m... [more]
D7G759_ECTSI1.500e-825.40Weakly similar Glutamic acid-rich protein n=2 Tax=... [more]
A0A835ZEZ8_9STRA3.710e-825.00ENTH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1UKU7_9STRA6.920e-824.07Hypothetical protein n=3 Tax=Grammatophora oceanic... [more]
A0A7S2EXR9_TRICV1.220e-725.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A1Z5K193_FISSO8.500e-725.32ENTH domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S4VB79_9STRA2.100e-623.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZTH1_9STRA5.630e-525.83ENTH domain-containing protein n=1 Tax=Pseudo-nitz... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:316979..321569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score60.8
Seed ortholog evalue1.9e-06
Seed eggNOG ortholog2850.Phatr47192
Model size1434
Hectar predicted targeting categorysignal peptide
Exons11
EggNOG OGs2ECB5@1,2SI7J@2759,2XBE3@2836
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_002290.1
Cds size1434
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17663.1prot_Ecto-sp6_S_contig85.17663.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig85 316979..321569 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350481.043031-CDS-Ecto-sp6_S_contig85:316978..3170411682350481.043031-CDS-Ecto-sp6_S_contig85:316978..317041Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 316979..317041 -
1682350481.053033-CDS-Ecto-sp6_S_contig85:317253..3173681682350481.053033-CDS-Ecto-sp6_S_contig85:317253..317368Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 317254..317368 -
1682350481.0614617-CDS-Ecto-sp6_S_contig85:317874..3179841682350481.0614617-CDS-Ecto-sp6_S_contig85:317874..317984Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 317875..317984 -
1682350481.0695972-CDS-Ecto-sp6_S_contig85:318304..3183941682350481.0695972-CDS-Ecto-sp6_S_contig85:318304..318394Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 318305..318394 -
1682350481.0779223-CDS-Ecto-sp6_S_contig85:318658..3187601682350481.0779223-CDS-Ecto-sp6_S_contig85:318658..318760Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 318659..318760 -
1682350481.0861704-CDS-Ecto-sp6_S_contig85:318893..3190071682350481.0861704-CDS-Ecto-sp6_S_contig85:318893..319007Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 318894..319007 -
1682350481.0948803-CDS-Ecto-sp6_S_contig85:319454..3195241682350481.0948803-CDS-Ecto-sp6_S_contig85:319454..319524Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 319455..319524 -
1682350481.1029377-CDS-Ecto-sp6_S_contig85:319651..3198331682350481.1029377-CDS-Ecto-sp6_S_contig85:319651..319833Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 319652..319833 -
1682350481.110711-CDS-Ecto-sp6_S_contig85:320222..3203391682350481.110711-CDS-Ecto-sp6_S_contig85:320222..320339Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 320223..320339 -
1682350481.1185374-CDS-Ecto-sp6_S_contig85:320842..3209931682350481.1185374-CDS-Ecto-sp6_S_contig85:320842..320993Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 320843..320993 -
1682350481.1262546-CDS-Ecto-sp6_S_contig85:321249..3215691682350481.1262546-CDS-Ecto-sp6_S_contig85:321249..321569Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 321250..321569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig85.17663.1

>prot_Ecto-sp6_S_contig85.17663.1 ID=prot_Ecto-sp6_S_contig85.17663.1|Name=mRNA_Ecto-sp6_S_contig85.17663.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=478bp
MGHRRLVLLGLAVVVLFAVDGAAAASKGAPRAGSQQRRSAKASRSSRPSR
RDIDEDEQEFQGWDGETKKGTRRSSSSKSSRAARDDGSVGRRVRPSSTPG
SSRSSSRYQESGTSRRRSRGMELVPSRRSPPKSSMLSGLAATMKGKAASM
QEDAKGKVTEWRNIAKTTVWFSSKMEKFMIQMTWPDDGALDDAWVKDTMN
FLESAGNEPPRSPNNPNKRILRKLWLRMTEGDYRTKLKALQILHHTTMDL
SSEANGRVRNQFMKMRDETNHKNRNEVYFEPARIMDVTSSGMPFLPLLRS
YSSFTLRRMTEVQGGPKQQIASTLRSKKTSQPEAVALLRRLDKLICTGMG
CKVDRKTLNTITGQVMQLTARDLMTLWRLYVKGLTRLIKGGYKEGRTPAP
EAVAQLLTQYGKTQQALERYLTHFKKIVRDRRLFEDNQVDPAALQVCLAS
VTQADGQQGAEAEEEEDDDDDDDEQEE*
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mRNA from alignment at Ecto-sp6_S_contig85:316979..321569-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig85.17663.1 ID=mRNA_Ecto-sp6_S_contig85.17663.1|Name=mRNA_Ecto-sp6_S_contig85.17663.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4591bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:316979..321569- (Ectocarpus species6 EcLAC_371)
ATGGGACACCGTCGACTTGTTCTACTGGGCTTGGCGGTTGTCGTCCTGTT CGCAGTTGATGGCGCTGCTGCTGCTTCAAAGGGTGCTCCACGAGCAGGAA GTCAACAACGCCGGTCGGCGAAGGCCTCACGCAGCAGTCGTCCCAGCCGC AGGGACATTGACGAGGATGAGCAAGAGTTTCAGGGTTGGGACGGCGAGAC TAAAAAGGGAACAAGGAGGTCATCTAGTAGCAAATCTAGCCGAGCAGCAC GTGACGATGGGTCGGTTGGCAGGCGTGTGCGGCCATCGTCGACACCAGGG TCATCTCGGTCGAGCTCGAGGTTGGTCCCGTTTGCGAGGGCTAGACGCGT GGCAACATGACATGACAGCACATTCAACATTGTTGCCTGGAAACCATAGG CGACGAACAGTTCTGAAGAGGTGGAATACACCTGCGAGAAGCTGGCACGT CGATTTTGAGTCTCTTTGATTTTCATTTAGGTGGGGGGCGTGGTTCAGCG TTCGTGGAAACATGCTGTATGTAAAACAAAATCCATCATACAAACAAACA ACCCCACATTTTTCACTGTTTCGCAGATATCAGGAAAGCGGGACATCGCG ACGCAGGAGCCGAGGGATGGAGCTGGTGCCTAGCAGGCGTAGCCCACCTA AGAGTAGCATGCTATCAGGTTTGGCAGCTACGATGAAAGGCAAGGCTGCG TCAATGCAAGAAGATGCCAAGGGCAAGGTGAGCCATGCCGCGATGTCACG TGTGAGTGCGCCGCTCTGTGAGGTTACACGGGACCAGGTACCGGTTGTCT GTACTGCTGGATATGTAGACACCGTAGATTCTGTGAACTGCTGGCGGCAC CACGACGAGCCAGCTTGCTTGCTAGGAGTGGTGCGCATAAAGACACGAGC CAGTGCCCAAACTAGTAGATCGATTGGATGTTTTTTTCTTAACATGTGCA ACTATTGTTTGTGCATGAGATTTACAACTGCAAGATATTCTGAAAGAGAA ATCCTTCATTCTAATGTAATCTCAATCCGATTTTACCGCCTTCTGAGACA TGAAACCTTGAAAGGCGACCCTCTATGCGAATGACACAGACAATAAGGTG TTTTACAAGGTGTTTCGCGCTACCAAGCGCAGGCAAAATGTGTTTTTGGG ACAGGGTTTTCGAATCAGAATAATTTGACTGGCCTTGTGACAAGCTATCC ATAACGATGCGATTTGACTTCTGCCTCAAGGTGACGGAATGGAGGAACAT CGCAAAGACGACGGTGTGGTTTTCGAGCAAGATGGAAAAGTTCATGATCC AAATGACATGGCCGGATGATGGAGCTCTCGACGATGCCTGGGTGAAGGTC GGCGCCGTGTGGTCCTAAAGAAGTGGCCTCGGATTTGACTTTTCGGGGTG TTGGAATGAAAGCGTTAATTGCGAAATGCGATGTTTGAAGTTGTTGCGAA ATGCATCCTCGTATGCGTATACATCAGCAAGGGTGCCCGCTGGAGCGGGC TCATGAAAGCAGAGCAGTAGTAATCAACAGGTGGCGCAAGATGAAAAAGA AAGCTCGAAAAGCTGACGGCCAGCCGTGATGTTTTCCAAGCTCGAACAGC CCACACAACGTACTTGAAATTAGTACTAAGACTGGAGCAACCTAACGAAC CAACACCGGCCCAATTTTATTTTACCAATCTGTCGTCAGTCTTGCAACCC TAATTTTTGGCCCTTGTTCTCTGCTGGCAAACACAGGACACGATGAATTT TCTCGAGAGCGCTGGGAATGAGCCTCCTCGCTCGCCCAACAACCCCAACA AGCGCATTCTCCGGAAGCTTTGGTTGAGGATGACAGAAGGAGACTACCGA ACCAAGCTGAAGGCGTTACAGATCTTGCACCACACAACGATGGATCTCAG CTCAGAAGCCAACGGCCGGTAAGGTGTTGCGGTACAAGACACGGGGCCAG AGGTAGGATTTCAACATTCTCGGACAAGGTTTGTGATGAACCGCACTTAT TTAATGGTACGCTTTTTACTTCTCGCCATGGTGCCGTTTTCTCAGGGTGA GGAACCAGTTCATGAAGATGAGGGACGAAACGAACCACAAGAATCGCAAT GAGGTGTACTTCGAGGTGAGAGCTGTGGTGCTGTATTTAGCCTGTCTAAA AGACATTGCGCCCCCACGCGGAAGAGATCAGGATTAGACGAAGGCAAGGT ACCAATGCCGTTGAGCGTAGTTTTTGACACGTGGTTGGGAGAATCTCTTC GTTTGTTACGCGTTGACGTGTTGAATGCGCGTTTGCGCTCACAGGGGGCA CGTAGATTGCTACAGAAAGTACTGCTACTTTGCAATGATATTTTCATTAG TTTGTGTCAAGCTATCTAGTGACCACGGCAATCCATCCGTTCGCCATTGA AGAGTACGAAAGAGGAGGTACTGAACGGAGGTCAAAATGGTTTACAGTTT TTTGTGTGAAGGCAGCAACAAGAACAACGACGATGACCACAACAGAAGCA ACACCTCGCGATTCGTTTTTCCTGATTGTGGACCCGCCCTCGCTCATTCT CTCGTTCGGCAGCCTGCGCGCATCATGGACGTTACCAGCTCCGGTATGCC GTTTCTACCGCTTCTGCGGTCCTACTCTTCGTTCACGTTGAGGAGAATGA CTGAGGTGCAAGGCGGGCCGAAACAGGTGTGTGGGAGAGTTTAGCTTGAT TTTCGGGTAACCAGCCATGTTTCCACCGCTCGGTCATGTCGAACCTCGCA TTTCTTGTTTGCGTTGCGTATCTTATCTGAATGCCGTACTCGCCGCCCGT GGGTACGAGCAGATAGCGTCAACGCTTCGGAGCAAGAAGACCTCGCAACC GGAAGCCGTAGCACTCCTTCGACGCTTGGACAAGCTCATATGCACCGGGA TGGGTTGCAAGGTACGTGACGCCGTGCAGGTTGACTTCATGTCATTTATC CGCAGTAGTACGCACTCCCAGCAGGTACCCCCGAGAGATATTTCCTATCC CCACCTCCGCGTTTTCCAGCCGTCTACCTGTCGTTGGATTTGGTGTCTAC TGTCGTTGTTCGTGGGAATGGTATCCAAGGGGGGCATCTATTGGGTTCCT CCCTCGCCATGTCATATTGGGTGAAGTGAGGACACTCACTAGCGTCTCCC GCCATGTTTGTTTCGATCGGCTCAGGTGGACCGCAAGACCTTGAACACGA TCACGGGGCAGGTGATGCAACTTACTGCCAGAGACTTGATGACCTTGTGG AGACTATACGTGAAGGTGAGCGTTTACAATATTGAGGACAGAGAGAACCG CAATGCTTTATTCGGGTTTTCATGTACGCGAAAAGCCAGAGTGCACTGGA GGGACAGACCCTGTTAGGATATCCTCTAGCCGAAGCACGGCTGTAGTGTA TTAGCTGATGTGAGATGGGCAGTGCTGTCGGTTCTTGATCCAGGGACACG TCCCCATTTCCTTGTTACATGACGTCTTTTCTTGTGGCCTTGATTAAGCC ACACCTGATGCGAGCGACATTAAGTGTGTTGCTTTAGGTCCACATGTGAC ATTTGTCCCATTCTCCGTGGGCACTTCTTGCACAGGGTCTGACGAGGTTG ATCAAGGGCGGGTACAAGGAAGGAAGAACGCCTGCGCCGGAGGCAGTTGC GCAACTTCTGACCCAGTACGGTAAAACCCAACAGGCTTTGGAAAGGTGAG TAGTTAGTCTGCATCTAGCACCAGATCCCAACGAGATAGGTACGGTGCAG GTACGCTTCGACCACACAACAAACTGACGTGTTGAAGATAACCATGTTTT AAGTTCGCCCTGTGGCCAACGTACTAGGGTCCGGCGGATAGCGCCTTCGA AAAGCCGATACAAACGCTTCGTAATCTGGGAGATGCGTTTGGGGCACGAT TCCTTCAAGTCTGAAAGCGCGTTTCGAAAACCTGGGGTATTGGGATCGAG TTGGGATCCAAAATAATGATTTAAACAATAGGTTCTTGGAAGTTGGACAG GTCATCACTTCATCACACACAGCAGTAAATTACGCCTGGTGTAGGCGTTC TGTGATGGCGTACTCCTACACTAGGAACCATCACATGCTCGAGTTGTGAT CCTGTTCTTGCTGGGGCGCCAGAGTGATCTTGCCGCTTTTTTCACTCACA GATACCGTCCTCGTGATCGTCCTCTGGCACGAATTCTTCCCCGTCTCCCA GGTACTTGACACACTTCAAGAAGATCGTTAGGGACCGGAGGCTCTTTGAG GACAACCAAGTTGACCCGGCCGCTTTACAAGTGTGCTTAGCGTCGGTGAC GCAAGCGGATGGCCAGGTACAAGACGTGGATGTCTACATGATTTGGCCAT GATTGCCTCCGAGTTGTGTTTGGGCATGGTTACCTTCTGGTGCGCATCGA GGATTATGCGCCGTACGAGTATTGCGCTGGATTGTGATGATTTGTGATGC GAGTAAACGATAAATTCGCGAGCACCAAGATCCCCCTCATTCATATTCCA CCTCTATTTGATATGTCGGTTTTCTCAGCAGGGTGCCGAGGCCGAGGAGG AGGAGGACGACGATGACGACGACGACGAGCAAGAAGAATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:316979..321569-

>mRNA_Ecto-sp6_S_contig85.17663.1 ID=mRNA_Ecto-sp6_S_contig85.17663.1|Name=mRNA_Ecto-sp6_S_contig85.17663.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1434bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:316979..321569- (Ectocarpus species6 EcLAC_371)
ATGGGACACCGTCGACTTGTTCTACTGGGCTTGGCGGTTGTCGTCCTGTT
CGCAGTTGATGGCGCTGCTGCTGCTTCAAAGGGTGCTCCACGAGCAGGAA
GTCAACAACGCCGGTCGGCGAAGGCCTCACGCAGCAGTCGTCCCAGCCGC
AGGGACATTGACGAGGATGAGCAAGAGTTTCAGGGTTGGGACGGCGAGAC
TAAAAAGGGAACAAGGAGGTCATCTAGTAGCAAATCTAGCCGAGCAGCAC
GTGACGATGGGTCGGTTGGCAGGCGTGTGCGGCCATCGTCGACACCAGGG
TCATCTCGGTCGAGCTCGAGATATCAGGAAAGCGGGACATCGCGACGCAG
GAGCCGAGGGATGGAGCTGGTGCCTAGCAGGCGTAGCCCACCTAAGAGTA
GCATGCTATCAGGTTTGGCAGCTACGATGAAAGGCAAGGCTGCGTCAATG
CAAGAAGATGCCAAGGGCAAGGTGACGGAATGGAGGAACATCGCAAAGAC
GACGGTGTGGTTTTCGAGCAAGATGGAAAAGTTCATGATCCAAATGACAT
GGCCGGATGATGGAGCTCTCGACGATGCCTGGGTGAAGGACACGATGAAT
TTTCTCGAGAGCGCTGGGAATGAGCCTCCTCGCTCGCCCAACAACCCCAA
CAAGCGCATTCTCCGGAAGCTTTGGTTGAGGATGACAGAAGGAGACTACC
GAACCAAGCTGAAGGCGTTACAGATCTTGCACCACACAACGATGGATCTC
AGCTCAGAAGCCAACGGCCGGGTGAGGAACCAGTTCATGAAGATGAGGGA
CGAAACGAACCACAAGAATCGCAATGAGGTGTACTTCGAGCCTGCGCGCA
TCATGGACGTTACCAGCTCCGGTATGCCGTTTCTACCGCTTCTGCGGTCC
TACTCTTCGTTCACGTTGAGGAGAATGACTGAGGTGCAAGGCGGGCCGAA
ACAGCAGATAGCGTCAACGCTTCGGAGCAAGAAGACCTCGCAACCGGAAG
CCGTAGCACTCCTTCGACGCTTGGACAAGCTCATATGCACCGGGATGGGT
TGCAAGGTGGACCGCAAGACCTTGAACACGATCACGGGGCAGGTGATGCA
ACTTACTGCCAGAGACTTGATGACCTTGTGGAGACTATACGTGAAGGGTC
TGACGAGGTTGATCAAGGGCGGGTACAAGGAAGGAAGAACGCCTGCGCCG
GAGGCAGTTGCGCAACTTCTGACCCAGTACGGTAAAACCCAACAGGCTTT
GGAAAGGTACTTGACACACTTCAAGAAGATCGTTAGGGACCGGAGGCTCT
TTGAGGACAACCAAGTTGACCCGGCCGCTTTACAAGTGTGCTTAGCGTCG
GTGACGCAAGCGGATGGCCAGCAGGGTGCCGAGGCCGAGGAGGAGGAGGA
CGACGATGACGACGACGACGAGCAAGAAGAATGA
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