mRNA_Ecto-sp6_S_contig85.17660.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI) HSP 1 Score: 569 bits (1466), Expect = 8.250e-205 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 1
Query: 1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQNHG 873
MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI QNHG
Sbjct: 1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLIGQNHG 291
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA) HSP 1 Score: 375 bits (963), Expect = 2.220e-128 Identity = 195/261 (74.71%), Postives = 220/261 (84.29%), Query Frame = 1
Query: 76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
+R+A+ GD +ASRLLHDARAG+ H+EAHSE G+YLK MVFGGLDGILTSFA+VAGAAGG L VVLVLGFSNI ADALSMGVGEYLSS+AHNEYVMAEKRREEWELKNHREGEI EMV IF +RGMS++DA DV+ KMAKYDDFFVNLMM+EEL LQVP D+ T+KEGF+MFLSFA FGA+PLLGY I P++ PD S AILF +AC VT SLF MGAIKS+F TR W SG EM+ LGG CAA+AFEIG VDGL+
Sbjct: 18 IRDAYNHGDAEASRLLHDARAGEPHEEAHSEAGEYLKVMVFGGLDGILTSFAVVAGAAGGGLDWPVVLVLGFSNILADALSMGVGEYLSSQAHNEYVMAEKRREEWELKNHREGEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEELQLQVPESQDE-TIKEGFIMFLSFATFGALPLLGYTIFPMLDPDISNAILFKLACAVTGVSLFLMGAIKSKFATRSWYASGFEMVCLGGVCAAVAFEIGNLVDGLL 277
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA) HSP 1 Score: 328 bits (841), Expect = 1.510e-109 Identity = 172/262 (65.65%), Postives = 203/262 (77.48%), Query Frame = 1
Query: 76 VRNAFMTGDQQASRLLHDAR-AGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
++A+ D +ASRL+H + + HDE H GDY+K+M+FGGLDGILTSFAIVAGAAGG LPV VV+VLGFSNIFADA SMG+GEYLSSKAHNE+V EK RE WEL+N REGEI EM++I+ ERGM DAEDV+ KM+KYDDFFVN+MM EELGLQVP +DD VKEG VMFLSFA FGAMPLLGY ++PL P P+ LF +AC VTA +LF MGA+KS+F TR W SG EML LGG CA +A+EIG V L+
Sbjct: 32 AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPD-PNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK) HSP 1 Score: 311 bits (798), Expect = 2.040e-103 Identity = 164/263 (62.36%), Postives = 201/263 (76.43%), Query Frame = 1
Query: 76 VRNAFMTGDQQASRLLHDAR--AGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
R A+ D +ASR++HD+ AGQ H E H G+Y+KAM+FGGLDGILTSFAIVAGA GG L VL+LGFSNI ADALSMGVGEYLSSKAHNEYV++EK+REEWEL+NH+EGEI EM++I+ ERGM + DA V+ MAKY+ FFVN+MM EELGLQVP D+D+T+KEG VMFLSFA FGA+PLLGYVI P + + + LF+ A T LF MGA+KS FGT+ W SG E L LGG+CA +A+E+G V+GL+
Sbjct: 11 ARAAYYNLDPEASRIIHDSTSAAGQ-HRENHKGGGEYVKAMIFGGLDGILTSFAIVAGAVGGGLAWQSVLILGFSNILADALSMGVGEYLSSKAHNEYVLSEKKREEWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 272
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK) HSP 1 Score: 305 bits (781), Expect = 1.420e-100 Identity = 164/284 (57.75%), Postives = 206/284 (72.54%), Query Frame = 1
Query: 19 ANENSHLAPEGVGA--DYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQV--PTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
A E S L + G+ +Y K R A+ D +A R HD AHD+ ++ G+ LKA+VFGGLDG+LTSFAI+AGAAGG + V VVLVLGFSNI ADALSMGVGEYLSS+AH EYV++E+RREEWEL+NHREGE+ EMVEI+ RGM+R DAE V+ ++AKYD+FFVN+MM EELG+ D DTV+EG +MF +FA FG+MPLLGY +VP + PD+S + LF VA VT LFG+GA+KS F T+ W SG E L LGG CA +A+EIG V ++
Sbjct: 9 AGEGSSLVRKNSGSHVNYSK-ARKAYAEKDVEALRNAHDNMEEGAHDDHYTPMGEKLKAVVFGGLDGVLTSFAIIAGAAGGGMGVDVVLVLGFSNIVADALSMGVGEYLSSRAHAEYVLSERRREEWELRNHREGEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALAPDASSSELFAVAVFVTLLFLFGLGAVKSHFSTKSWYCSGIETLLLGGCCAGIAYEIGNCVQSML 291
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S2H009_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H009_9STRA) HSP 1 Score: 297 bits (760), Expect = 5.620e-97 Identity = 165/279 (59.14%), Postives = 197/279 (70.61%), Query Frame = 1
Query: 25 ENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
E + L P G + KD R AF D +ASR HD R +E H +G LK M+FGGLDGILTSFAIVAGAAGG L VVLVLGFSNIFADALSMGVGE+LSSKA NE++++E++RE WE++N+ EGEI EMVEI+E RGMS+ DA+ VI M+KY DFFV++MM EEL LQVP D ++ KEG VMF SFA FG+ PLLGYVI P PD LF+ AC VT LFGMG +KS F T +W G E L LGG+CA +AF IG+ VDGL+
Sbjct: 42 EGTKLLPSDNGQE--KDARKAFEGADVEASRNYHDNRDLLNSEEQHQTEGGLLKPMIFGGLDGILTSFAIVAGAAGGSLSTGVVLVLGFSNIFADALSMGVGEFLSSKAENEWILSERKREAWEMENYPEGEIREMVEIYESRGMSKDDAQIVIDTMSKYKDFFVDVMMAEELQLQVPEDDHVWESFKEGVVMFCSFATFGSFPLLGYVIFPTFFPDMGSDGLFYGACAVTGVVLFGMGCVKSIFSTANWFLCGMETLLLGGACATVAFTIGQFVDGLV 318
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S1VE63_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE63_9STRA) HSP 1 Score: 295 bits (755), Expect = 8.590e-97 Identity = 155/263 (58.94%), Postives = 200/263 (76.05%), Query Frame = 1
Query: 76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD---DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGL 855
R A+ D +AS+ H+ R + +E H E G LK M+FGGLDGILTSFAIVAGAAGGHL VVL+LGFSNIFADALSMGVGE+LSSKA NE++++E+RRE WE++N+ EGEI EMV+I+ RGM +QDAE VI MAKY+DFFV++MM +EL LQVP DDD ++++EG +MF SFAFFGA+PL+GYVI P++ P LF+ AC+VTA LF +G++KS F + +W SG+E L LGG+CA LA+ IG+ +DGL
Sbjct: 17 ARRAYSDMDPEASKAFHETR--EISEEPHQEGGGLLKPMIFGGLDGILTSFAIVAGAAGGHLSTGVVLILGFSNIFADALSMGVGEFLSSKAENEWILSERRREAWEMENYPEGEIKEMVDIYVSRGMEQQDAELVIKTMAKYEDFFVDVMMTQELELQVP--DDDHVKESMREGVIMFCSFAFFGALPLIGYVIFPILFPTMDDDALFWSACIVTAVVLFMLGSVKSMFCSMNWFVSGSETLLLGGACATLAYTIGQFLDGL 275
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A1E7FSD0_9STRA (Vacuolar Fe2+/Mn2+ uptake transporter-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSD0_9STRA) HSP 1 Score: 292 bits (748), Expect = 7.330e-96 Identity = 154/271 (56.83%), Postives = 202/271 (74.54%), Query Frame = 1
Query: 76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEK-------GDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQ 864
R A+ +G+ ASR H+ + A H+++ G L+ ++FGGLDGILTSFAIVAGAAGG +PV+ VLVLGFSNIFADALSMGVGE+LSSKA+NE++++E+ REEWE++N REGEI EM++I+ +G++ +DA VI MAKY+DFFV++MM +EL LQVP + + ++KEGFVMF SFAFFGAMPLLGYVI+PL+ PD P LF AC+VTA LF +G+IKS F +W SG E L LGG+CA +AF IG V+GL+ +
Sbjct: 1 ARLAYESGNTDASRRYHETKTAVADGPEHTDEEPWHQSSGGLLQPVIFGGLDGILTSFAIVAGAAGGGIPVSAVLVLGFSNIFADALSMGVGEFLSSKANNEWILSEREREEWEMQNFREGEIQEMIDIYVNKGLTLEDATIVIKTMAKYEDFFVDIMMQQELELQVPESNHVEQSMKEGFVMFCSFAFFGAMPLLGYVIIPLLFPDLEPTYLFKSACVVTALVLFLLGSIKSNFSRSNWFLSGLETLLLGGTCATVAFVIGSFVNGLLDE 271
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: B8BVF1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF1_THAPS) HSP 1 Score: 291 bits (746), Expect = 1.860e-95 Identity = 152/285 (53.33%), Postives = 206/285 (72.28%), Query Frame = 1
Query: 13 ASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQ 864
AS +E++ L P+G R A+ D +AS+ HD R + E H +G LK ++FGGLDGILT+FAIVAGAAGG +P+ V+LVLGFSNIFADAL+MGVGE+LSSKA NE++++E+RRE WE++N+ EGEI EM++I++ERGM+ DA+ VI MAKY +FFV++MM EEL LQVP D +++KEG VMF +FA FG++PLLGY+++P + P +LF AC+VT LFGMG +KS F +W T G E L LGG+CA +A+ IG+ VD LI++
Sbjct: 2 ASTDESTSLVPDGA--------RKAYDGLDTEASKSFHDKRHNTSGVEMHQTEGGMLKPLIFGGLDGILTAFAIVAGAAGGSMPIPVILVLGFSNIFADALAMGVGEFLSSKAENEWILSERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLIAE 278
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: B7FUB4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUB4_PHATC) HSP 1 Score: 285 bits (730), Expect = 5.290e-93 Identity = 154/261 (59.00%), Postives = 193/261 (73.95%), Query Frame = 1
Query: 67 GKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAV 846
G R+AF + D + SR HDA++ A ++ H +G LK ++FGGLDGILTSFAIVAGAAGG L VVL+LG SNIFADALSMGVGE+LSSKA+NE++++E+ REEWEL+N+ EGEI EMVEIFE++GMS +DA I MAKY DFFV++MM +EL LQVP D +++KEG VMF SFAFFGA+PLLGYV+ PL D S LF AC+VT LF MG++KS F + W +G E L LGG+CA +AF IG+ V
Sbjct: 11 GSAARDAFQSADAKKSRQYHDAKS--ASEDGHQTEGGMLKPIIFGGLDGILTSFAIVAGAAGGELSPQVVLILGVSNIFADALSMGVGEFLSSKANNEWILSERAREEWELENYPEGEIKEMVEIFEDKGMSHEDAVSCINTMAKYKDFFVDIMMQQELELQVPDKDHIRESMKEGVVMFCSFAFFGALPLLGYVLFPLEFHDMSEGELFVSACIVTGMVLFFMGSVKSFFSNQQWFIAGMETLLLGGACATVAFTIGQLV 269 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17660.1 >prot_Ecto-sp6_S_contig85.17660.1 ID=prot_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=292bp MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHback to top mRNA from alignment at Ecto-sp6_S_contig85:303212..307341+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17660.1 ID=mRNA_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4130bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:303212..307341+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:303212..307341+ >mRNA_Ecto-sp6_S_contig85.17660.1 ID=mRNA_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:303212..307341+ (Ectocarpus species6 EcLAC_371)back to top |