mRNA_Ecto-sp6_S_contig85.17660.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig85.17660.1
Unique NamemRNA_Ecto-sp6_S_contig85.17660.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI)

HSP 1 Score: 569 bits (1466), Expect = 8.250e-205
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 1
Query:    1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQNHG 873
            MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI QNHG
Sbjct:    1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLIGQNHG 291          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.220e-128
Identity = 195/261 (74.71%), Postives = 220/261 (84.29%), Query Frame = 1
Query:   76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
            +R+A+  GD +ASRLLHDARAG+ H+EAHSE G+YLK MVFGGLDGILTSFA+VAGAAGG L   VVLVLGFSNI ADALSMGVGEYLSS+AHNEYVMAEKRREEWELKNHREGEI EMV IF +RGMS++DA DV+ KMAKYDDFFVNLMM+EEL LQVP   D+ T+KEGF+MFLSFA FGA+PLLGY I P++ PD S AILF +AC VT  SLF MGAIKS+F TR W  SG EM+ LGG CAA+AFEIG  VDGL+
Sbjct:   18 IRDAYNHGDAEASRLLHDARAGEPHEEAHSEAGEYLKVMVFGGLDGILTSFAVVAGAAGGGLDWPVVLVLGFSNILADALSMGVGEYLSSQAHNEYVMAEKRREEWELKNHREGEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEELQLQVPESQDE-TIKEGFIMFLSFATFGALPLLGYTIFPMLDPDISNAILFKLACAVTGVSLFLMGAIKSKFATRSWYASGFEMVCLGGVCAAVAFEIGNLVDGLL 277          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.510e-109
Identity = 172/262 (65.65%), Postives = 203/262 (77.48%), Query Frame = 1
Query:   76 VRNAFMTGDQQASRLLHDAR-AGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
             ++A+   D +ASRL+H  +   + HDE H   GDY+K+M+FGGLDGILTSFAIVAGAAGG LPV VV+VLGFSNIFADA SMG+GEYLSSKAHNE+V  EK RE WEL+N REGEI EM++I+ ERGM   DAEDV+ KM+KYDDFFVN+MM EELGLQVP   +DD VKEG VMFLSFA FGAMPLLGY ++PL  P   P+ LF +AC VTA +LF MGA+KS+F TR W  SG EML LGG CA +A+EIG  V  L+
Sbjct:   32 AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPD-PNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK)

HSP 1 Score: 311 bits (798), Expect = 2.040e-103
Identity = 164/263 (62.36%), Postives = 201/263 (76.43%), Query Frame = 1
Query:   76 VRNAFMTGDQQASRLLHDAR--AGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
             R A+   D +ASR++HD+   AGQ H E H   G+Y+KAM+FGGLDGILTSFAIVAGA GG L    VL+LGFSNI ADALSMGVGEYLSSKAHNEYV++EK+REEWEL+NH+EGEI EM++I+ ERGM + DA  V+  MAKY+ FFVN+MM EELGLQVP  D+D+T+KEG VMFLSFA FGA+PLLGYVI P +    + + LF+ A   T   LF MGA+KS FGT+ W  SG E L LGG+CA +A+E+G  V+GL+
Sbjct:   11 ARAAYYNLDPEASRIIHDSTSAAGQ-HRENHKGGGEYVKAMIFGGLDGILTSFAIVAGAVGGGLAWQSVLILGFSNILADALSMGVGEYLSSKAHNEYVLSEKKREEWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 272          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK)

HSP 1 Score: 305 bits (781), Expect = 1.420e-100
Identity = 164/284 (57.75%), Postives = 206/284 (72.54%), Query Frame = 1
Query:   19 ANENSHLAPEGVGA--DYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQV--PTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
            A E S L  +  G+  +Y K  R A+   D +A R  HD     AHD+ ++  G+ LKA+VFGGLDG+LTSFAI+AGAAGG + V VVLVLGFSNI ADALSMGVGEYLSS+AH EYV++E+RREEWEL+NHREGE+ EMVEI+  RGM+R DAE V+ ++AKYD+FFVN+MM EELG+       D  DTV+EG +MF +FA FG+MPLLGY +VP + PD+S + LF VA  VT   LFG+GA+KS F T+ W  SG E L LGG CA +A+EIG  V  ++
Sbjct:    9 AGEGSSLVRKNSGSHVNYSK-ARKAYAEKDVEALRNAHDNMEEGAHDDHYTPMGEKLKAVVFGGLDGVLTSFAIIAGAAGGGMGVDVVLVLGFSNIVADALSMGVGEYLSSRAHAEYVLSERRREEWELRNHREGEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALAPDASSSELFAVAVFVTLLFLFGLGAVKSHFSTKSWYCSGIETLLLGGCCAGIAYEIGNCVQSML 291          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S2H009_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H009_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.620e-97
Identity = 165/279 (59.14%), Postives = 197/279 (70.61%), Query Frame = 1
Query:   25 ENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 858
            E + L P   G +  KD R AF   D +ASR  HD R     +E H  +G  LK M+FGGLDGILTSFAIVAGAAGG L   VVLVLGFSNIFADALSMGVGE+LSSKA NE++++E++RE WE++N+ EGEI EMVEI+E RGMS+ DA+ VI  M+KY DFFV++MM EEL LQVP  D   ++ KEG VMF SFA FG+ PLLGYVI P   PD     LF+ AC VT   LFGMG +KS F T +W   G E L LGG+CA +AF IG+ VDGL+
Sbjct:   42 EGTKLLPSDNGQE--KDARKAFEGADVEASRNYHDNRDLLNSEEQHQTEGGLLKPMIFGGLDGILTSFAIVAGAAGGSLSTGVVLVLGFSNIFADALSMGVGEFLSSKAENEWILSERKREAWEMENYPEGEIREMVEIYESRGMSKDDAQIVIDTMSKYKDFFVDVMMAEELQLQVPEDDHVWESFKEGVVMFCSFATFGSFPLLGYVIFPTFFPDMGSDGLFYGACAVTGVVLFGMGCVKSIFSTANWFLCGMETLLLGGACATVAFTIGQFVDGLV 318          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A7S1VE63_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE63_9STRA)

HSP 1 Score: 295 bits (755), Expect = 8.590e-97
Identity = 155/263 (58.94%), Postives = 200/263 (76.05%), Query Frame = 1
Query:   76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD---DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGL 855
             R A+   D +AS+  H+ R  +  +E H E G  LK M+FGGLDGILTSFAIVAGAAGGHL   VVL+LGFSNIFADALSMGVGE+LSSKA NE++++E+RRE WE++N+ EGEI EMV+I+  RGM +QDAE VI  MAKY+DFFV++MM +EL LQVP  DDD   ++++EG +MF SFAFFGA+PL+GYVI P++ P      LF+ AC+VTA  LF +G++KS F + +W  SG+E L LGG+CA LA+ IG+ +DGL
Sbjct:   17 ARRAYSDMDPEASKAFHETR--EISEEPHQEGGGLLKPMIFGGLDGILTSFAIVAGAAGGHLSTGVVLILGFSNIFADALSMGVGEFLSSKAENEWILSERRREAWEMENYPEGEIKEMVDIYVSRGMEQQDAELVIKTMAKYEDFFVDVMMTQELELQVP--DDDHVKESMREGVIMFCSFAFFGALPLIGYVIFPILFPTMDDDALFWSACIVTAVVLFMLGSVKSMFCSMNWFVSGSETLLLGGACATLAYTIGQFLDGL 275          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: A0A1E7FSD0_9STRA (Vacuolar Fe2+/Mn2+ uptake transporter-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSD0_9STRA)

HSP 1 Score: 292 bits (748), Expect = 7.330e-96
Identity = 154/271 (56.83%), Postives = 202/271 (74.54%), Query Frame = 1
Query:   76 VRNAFMTGDQQASRLLHDARAGQAHDEAHSEK-------GDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQ 864
             R A+ +G+  ASR  H+ +   A    H+++       G  L+ ++FGGLDGILTSFAIVAGAAGG +PV+ VLVLGFSNIFADALSMGVGE+LSSKA+NE++++E+ REEWE++N REGEI EM++I+  +G++ +DA  VI  MAKY+DFFV++MM +EL LQVP  +  + ++KEGFVMF SFAFFGAMPLLGYVI+PL+ PD  P  LF  AC+VTA  LF +G+IKS F   +W  SG E L LGG+CA +AF IG  V+GL+ +
Sbjct:    1 ARLAYESGNTDASRRYHETKTAVADGPEHTDEEPWHQSSGGLLQPVIFGGLDGILTSFAIVAGAAGGGIPVSAVLVLGFSNIFADALSMGVGEFLSSKANNEWILSEREREEWEMQNFREGEIQEMIDIYVNKGLTLEDATIVIKTMAKYEDFFVDIMMQQELELQVPESNHVEQSMKEGFVMFCSFAFFGAMPLLGYVIIPLLFPDLEPTYLFKSACVVTALVLFLLGSIKSNFSRSNWFLSGLETLLLGGTCATVAFVIGSFVNGLLDE 271          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: B8BVF1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF1_THAPS)

HSP 1 Score: 291 bits (746), Expect = 1.860e-95
Identity = 152/285 (53.33%), Postives = 206/285 (72.28%), Query Frame = 1
Query:   13 ASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQ 864
            AS +E++ L P+G         R A+   D +AS+  HD R   +  E H  +G  LK ++FGGLDGILT+FAIVAGAAGG +P+ V+LVLGFSNIFADAL+MGVGE+LSSKA NE++++E+RRE WE++N+ EGEI EM++I++ERGM+  DA+ VI  MAKY +FFV++MM EEL LQVP  D   +++KEG VMF +FA FG++PLLGY+++P + P     +LF  AC+VT   LFGMG +KS F   +W T G E L LGG+CA +A+ IG+ VD LI++
Sbjct:    2 ASTDESTSLVPDGA--------RKAYDGLDTEASKSFHDKRHNTSGVEMHQTEGGMLKPLIFGGLDGILTAFAIVAGAAGGSMPIPVILVLGFSNIFADALAMGVGEFLSSKAENEWILSERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLIAE 278          
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Match: B7FUB4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUB4_PHATC)

HSP 1 Score: 285 bits (730), Expect = 5.290e-93
Identity = 154/261 (59.00%), Postives = 193/261 (73.95%), Query Frame = 1
Query:   67 GKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAV 846
            G   R+AF + D + SR  HDA++  A ++ H  +G  LK ++FGGLDGILTSFAIVAGAAGG L   VVL+LG SNIFADALSMGVGE+LSSKA+NE++++E+ REEWEL+N+ EGEI EMVEIFE++GMS +DA   I  MAKY DFFV++MM +EL LQVP  D   +++KEG VMF SFAFFGA+PLLGYV+ PL   D S   LF  AC+VT   LF MG++KS F  + W  +G E L LGG+CA +AF IG+ V
Sbjct:   11 GSAARDAFQSADAKKSRQYHDAKS--ASEDGHQTEGGMLKPIIFGGLDGILTSFAIVAGAAGGELSPQVVLILGVSNIFADALSMGVGEFLSSKANNEWILSERAREEWELENYPEGEIKEMVEIFEDKGMSHEDAVSCINTMAKYKDFFVDIMMQQELELQVPDKDHIRESMKEGVVMFCSFAFFGALPLLGYVLFPLEFHDMSEGELFVSACIVTGMVLFFMGSVKSFFSNQQWFIAGMETLLLGGACATVAFTIGQLV 269          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS5_ECTSI8.250e-20599.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YUT7_9STRA2.220e-12874.71VIT family-domain-containing protein n=1 Tax=Tribo... [more]
W7TLX2_9STRA1.510e-10965.65Vacuolar iron family transporter n=2 Tax=Monodopsi... [more]
A0A7S3XV86_HETAK2.040e-10362.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1NR54_HETAK1.420e-10057.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H009_9STRA5.620e-9759.14Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1VE63_9STRA8.590e-9758.94Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7FSD0_9STRA7.330e-9656.83Vacuolar Fe2+/Mn2+ uptake transporter-like protein... [more]
B8BVF1_THAPS1.860e-9553.33Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B7FUB4_PHATC5.290e-9359.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:303212..307341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score571.2
Seed ortholog evalue2.7e-160
Seed eggNOG ortholog2880.D8LRS5
Preferred nameCCC1
Model size876
KEGG koko:K10610
KEGG Pathwayko03420,ko04120,ko05161,ko05203,map03420,map04120,map05161,map05203
KEGG ModuleM00385,M00386
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0012505,GO:0015075,GO:0015093,GO:0015318,GO:0015684,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030026,GO:0031090,GO:0031224,GO:0034220,GO:0034755,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055071,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0097577,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098852,GO:1903874
Exons8
EggNOG free text desc.cellular manganese ion homeostasis
EggNOG OGsCOG1814@1,KOG4473@2759
Ec32 ortholog descriptionCcc1 family
Ec32 orthologEc-08_002260.1
Cds size876
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03400,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17660.1prot_Ecto-sp6_S_contig85.17660.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig85 303212..307341 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350480.8280442-CDS-Ecto-sp6_S_contig85:303211..3033271682350480.8280442-CDS-Ecto-sp6_S_contig85:303211..303327Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 303212..303327 +
1682350480.8380294-CDS-Ecto-sp6_S_contig85:304329..3044631682350480.8380294-CDS-Ecto-sp6_S_contig85:304329..304463Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 304330..304463 +
1682350480.8458755-CDS-Ecto-sp6_S_contig85:304926..3050241682350480.8458755-CDS-Ecto-sp6_S_contig85:304926..305024Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 304927..305024 +
1682350480.8534815-CDS-Ecto-sp6_S_contig85:305246..3053451682350480.8534815-CDS-Ecto-sp6_S_contig85:305246..305345Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 305247..305345 +
1682350480.8641698-CDS-Ecto-sp6_S_contig85:305674..3057791682350480.8641698-CDS-Ecto-sp6_S_contig85:305674..305779Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 305675..305779 +
1682350480.8720329-CDS-Ecto-sp6_S_contig85:306197..3062861682350480.8720329-CDS-Ecto-sp6_S_contig85:306197..306286Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 306198..306286 +
1682350480.8794558-CDS-Ecto-sp6_S_contig85:306545..3066511682350480.8794558-CDS-Ecto-sp6_S_contig85:306545..306651Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 306546..306651 +
1682350480.8896937-CDS-Ecto-sp6_S_contig85:307212..3073411682350480.8896937-CDS-Ecto-sp6_S_contig85:307212..307341Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 307213..307341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig85.17660.1

>prot_Ecto-sp6_S_contig85.17660.1 ID=prot_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=292bp
MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAH
DEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNI
FADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEE
RGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVM
FLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKS
QFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLISQNHG*
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mRNA from alignment at Ecto-sp6_S_contig85:303212..307341+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig85.17660.1 ID=mRNA_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4130bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:303212..307341+ (Ectocarpus species6 EcLAC_371)
ATGACTGGCAATGCATCAGCCAACGAAAACTCGCACCTGGCCCCGGAGGG TGTCGGAGCTGACTATGGGAAGGACGTGAGGAATGCTTTTATGACAGGAG ACCAACAGGCATCCAGGTACAAGTTAGGTACCTGTCTCCCGTCCCACCGC TCTCTCCTCTCTCCCTTGTGTGTATATATATGTACATGGCGAGACCGCAT GTGTGATAGCGATGTGACCCCATCTCTATGCAACTATGTTTGAATTTATG CTTGGCCAACGTGCGCTAGCTAAGCAAGGGAAGTTCGATGCGCGACATCA ACGTTCGTTTACATGTCTACAGCAGGAAACACCTGTAAGATGTAGCGCAG GGACCGCTGTAGACAGGCTGCTTGTAATCAACGATGCATGTCGCCCCGTG CGGTCTATTCAACGCACATCGCGCGTTTGCGGTTTCACGACAGTCTAAAG CAACCGTGATGACACACATGGGGCGTTTATTCGCTTTCGCGCGCATCGCC AAAACATCCGCGATAACGCCCTGTGCTTTCACCATGACCGCGGGCTGTTC GGAAACACCCACAAAGCCAATCCTGGCCTTTTCGTGCATGGAGTCGAAAC GTCGAAAGTCGAAACACTCCGGTGTGTCAGCGTTAACATATGCCTTCACT TTTCACTACTGCGGTGGGCACATCGTTCCCTACTGCTGAATCTATGACGT CACTGCTGTTCACCGCCACTGCAGCAGTAGCAGATTTCATTTGAACCGCG CGTGGTGTGGTGGTCAGGATATGGAGGTTCACGACGTACAGCCGTTCGCA GGTTAATGTAATAGATCATGGTAACGTACGCTCTTTCGGTACGTGTTTCT GTGCTTGCTGCATCTCCATATCCTGACCTCCACGTTAGCACTCAAACATT TGACGGTCTAGCCTAGTGTCTGGGTTCGCTTGAAGTGCAAGCGCTGTTGC GCAACATTCCAGACGGGCACCAACACCCTGGTTGAAACAACCGCGCTTGT TTGAATCCCACTTCCACCACCCACCAAAGTATGGTACGCACAGAGTTGAT GCACACAGCAGTCGATGCACACATGAACACACACCCCACGAAACACTATA TTTTGGTTTTCCTGGCAGGCTCCTTCACGATGCCCGCGCAGGCCAGGCCC ACGATGAAGCGCACAGTGAAAAGGGAGACTACCTCAAGGCGATGGTGTTT GGCGGTCTCGATGGCATCTTGACAAGCTTCGCTATCGTCGCGGGCGCGGC AGGTTTGTCTCGGACGTCATAATGAGCACTAGCAGCAAGTTTGTGACACC CTCGGGCGTAAAGCGTTGCCGGAGTCGGTAGTTGGAGCGCCAGCGGTGTG AATGGTGTTAAAGCAACCACGATTTTCCGCTGTAAACTTGAATCAGCGGT CAGTAGCACATTTTGCAAGGGTGGTGTGGGTTCACGGGTGATTTACTGTT TGTGGCTCGTTTAACTTGTTCCTCAGTGTTGGAGTCGTTTGACCATTTCA GTTTCGTTAAAAACTGCACCACTATGTTGCCTCAGCAACGGTCTTCAGAT TGCGCTTGAGTTGAGAATGCCAGTGTAGCCTTGGCAGGCCGCTGTCACTA GTCCACCCGAGAAATCGCTGTCGGGGAAAATGGCGGTGGTGTGCTTGTGT GAGAGCTCAACCGCCGCTTCTCAACAAGTGTTGCTTGCGAAATAATGGTT TACTTTGACTGACAGGAGGACATCTCCCGGTAGCTGTGGTTCTGGTGCTA GGATTCAGCAACATATTCGCAGATGCACTGAGCATGGGTGTTGGCGAGTA CCTCAGCAGCAAGGTGAGACAACATAGATAGGAGTGCAACGAGAAAACTA CCTTTTCGTGTAAACGCCTGTCGTTGTCGCATTTGCCATATTTGTCTATT CTTTCATTTTTCGTGTAAATCGCAAGGAGAGCTTGCCCCGTTCGCTTGCA AGTCTATTCGTTGCGTTCCCTCCAGGAAACAGTACATGGTTCCTCGCGAG GACGATGCCGATCATTTCCGCTGTGACTGTCGCAGGCCCACAATGAGTAC GTCATGGCAGAAAAGAGACGGGAAGAGTGGGAACTGAAGAATCACCGGGA AGGAGAAATATTGGAGATGGTCGAGATATTCGAGGTGTGTTATGAGCAGG GGTATCATGTACAAATCGTAGAGGCGTGTCTACAGCATCTCGAAACATTG TCCCAGGTAGTCTGTGGTTGCGCTGTGCGACGCCTTACGTGGCGAGGTAT CTGCTCGCAATGCCCAACAACCTATTCGTTGTCACCATGTTTTTGGGAAG CGCGCAGATTCTGGCCTTGACCGTTATAGCTGGTGACTGGAACGCTAGGC TAAACCTGGATGGCGTGATGGGCACACTGGCAGAACCCGTCCCGTTCCTA GACAGGATGCTGTGTTGCTATGTATTCAAATTCTCACAATTAATAAAACC TTGCAATTACCAGGAACGAGGGATGAGCCGACAAGATGCGGAGGACGTGA TCGGGAAAATGGCCAAGTACGATGACTTTTTTGTCAATCTTATGATGAAC GAGGAACTTGGTCTACAGGTTTGTGCCGAGCATGATGTCGTCGGATTGTG ATGTTGGGCATACCGTAAGAGTCGGAGAGATGGCACCCCGTGTTCGCGTT TTTGTATAGCGTATTGCTCCACAACAGGGGGGTACCACCGCCGAAAGGGT AGTTTTGGAACATGTCGAGGGTTTCCCTGAGAGATATTGGTTGGTGTTGG CACCCTACTAGTTGTGGAGAAAGACGCTAACACGGAGGTGCCATCTCTCC GACTCTTGCGGTAGTCTCGTAGACACTCCTAGCCGTTTATATACCCTTCT TAGACAACTGCTCCGCTTGAGAACGCGATCCATGGGATTGGTTTTAGATC TACCGTGAGTATGAGCACGGAGCTGAGGATACCCCGCTTTGGATTTTCTT CCCGACTGACCAACGTCGTTCGCTCGCATGTTGCAGGTACCGACGGGTGA CGATGACGACACAGTCAAGGAGGGCTTCGTCATGTTCCTTTCCTTCGCGT TTTTCGGTGCTATGCCTCTTCTGGGGTGAGTTCGTAACACCGTTTGACCT TGGATGACTGACCCCGATTTGTGGGCCGATTCCAGCAGTGTGCATGTACC CGCGAATAATCTGAGAAGTGACGTTTGAGCACACTTGCCTTTCGTTGGTT AGTGCAGGAGTGGGAAGACGTCAAAATGCTGGTTGGGTGGCATGTTGGAC GATAGATGACTGTGTCAAGAGGTTGCTAATTCTCGTTCCACCATCTAATT CTGCTTCCATTGAACTTAATTGCAACTTTCGCAGGTATGTCATCGTACCG TTGATCAAGCCTGATTCGTCACCAGCGATTCTGTTTTTCGTTGCGTGCTT GGTGACTGCGGCCAGCTTGTTCGGCATGGGCGCAATCAAGGTACGGGCTA CAGTTACTCAAGGCGATCCCGGTGGTTCCTCGATTGTGCTTGTCCGTCAT ACCAAAACTTGTCCGTGTTGCACCTCTGCGTCGTTCTTCTACCTGCCCGA TTTCGCTAACCCGGCGGACGAGTCGAAGACGCCAGTCTACGCGGGACAAA AACACGTGTGTTTTGCAAGGGATCGCCCGATCCCGATCAGGTCTCAGAGG AAGCTGAACAGACGAGAGTCGTGTTGCGTGTTTGGTCGTATTCGCATACA CCGTGACATTTCGGTCTTGTGCGGCAATCGTTGGGACACCCAAATCGCGT TGCAGCGGGGCATCACGCAGCGCGTGCATGTAACCAACTCAATACCGTAA GTCACACAGGAGGAACATACCTCAACAGTTTTTCTGTTTTCTCCGCCTTT CCTCTGCGGTGCTTGCCTTCACTTTCTCGTAAGTGTTCAGTCGTCCCTTT CACTCAAGAATACCGTGCCATTGGAATTTTGAGTACGCACAAACGCTTCA CTAACCATGACCAAATATCCTGCGACCCCCGCTGTTCCGACGCATGTCAA GAGTCAATTCGGCACCCGGCACTGGTGCACCTCCGGCACAGAAATGCTCT TCTTAGGAGGATCGTGCGCTGCGCTGGCCTTCGAAATAGGAAAGGCGGTG GACGGGCTCATCAGCCAAAATCACGGCTAA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:303212..307341+

>mRNA_Ecto-sp6_S_contig85.17660.1 ID=mRNA_Ecto-sp6_S_contig85.17660.1|Name=mRNA_Ecto-sp6_S_contig85.17660.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:303212..307341+ (Ectocarpus species6 EcLAC_371)
ATGACTGGCAATGCATCAGCCAACGAAAACTCGCACCTGGCCCCGGAGGG
TGTCGGAGCTGACTATGGGAAGGACGTGAGGAATGCTTTTATGACAGGAG
ACCAACAGGCATCCAGGCTCCTTCACGATGCCCGCGCAGGCCAGGCCCAC
GATGAAGCGCACAGTGAAAAGGGAGACTACCTCAAGGCGATGGTGTTTGG
CGGTCTCGATGGCATCTTGACAAGCTTCGCTATCGTCGCGGGCGCGGCAG
GAGGACATCTCCCGGTAGCTGTGGTTCTGGTGCTAGGATTCAGCAACATA
TTCGCAGATGCACTGAGCATGGGTGTTGGCGAGTACCTCAGCAGCAAGGC
CCACAATGAGTACGTCATGGCAGAAAAGAGACGGGAAGAGTGGGAACTGA
AGAATCACCGGGAAGGAGAAATATTGGAGATGGTCGAGATATTCGAGGAA
CGAGGGATGAGCCGACAAGATGCGGAGGACGTGATCGGGAAAATGGCCAA
GTACGATGACTTTTTTGTCAATCTTATGATGAACGAGGAACTTGGTCTAC
AGGTACCGACGGGTGACGATGACGACACAGTCAAGGAGGGCTTCGTCATG
TTCCTTTCCTTCGCGTTTTTCGGTGCTATGCCTCTTCTGGGGTATGTCAT
CGTACCGTTGATCAAGCCTGATTCGTCACCAGCGATTCTGTTTTTCGTTG
CGTGCTTGGTGACTGCGGCCAGCTTGTTCGGCATGGGCGCAATCAAGAGT
CAATTCGGCACCCGGCACTGGTGCACCTCCGGCACAGAAATGCTCTTCTT
AGGAGGATCGTGCGCTGCGCTGGCCTTCGAAATAGGAAAGGCGGTGGACG
GGCTCATCAGCCAAAATCACGGCTAA
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