mRNA_Ecto-sp6_S_contig85.17657.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE) HSP 1 Score: 424 bits (1090), Expect = 1.170e-148 Identity = 208/222 (93.69%), Postives = 210/222 (94.59%), Query Frame = 2
Query: 131 MIRLKKKXXXXXXXXXXXAMEVDEETPSNAAAQPKAGEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
MIRLKKK AME+DEETPSNAAAQPKA EEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTF+IPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI
Sbjct: 1 MIRLKKKQDDEKAAEAAAAMEIDEETPSNAAAQPKADEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 222
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK) HSP 1 Score: 299 bits (765), Expect = 4.460e-99 Identity = 154/232 (66.38%), Postives = 186/232 (80.17%), Query Frame = 2
Query: 131 MIRLKKKXXXXXXXXXXX----AMEVDEETPSNAAA------QPKAGEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
MIRLKKK XXXXX AM+V++E+ + A + K GE K++G + +LGIGG++++ G AK T K+TPGE+RIQKDIA+LDGG+VA ITFPNPNNLTSF+V+V PD+G W+GA+YHFTF+IPA+YPH+PPKV C TKIYHPNINLQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLN EAAELYR++ QFER V+R+L G + E F+RLI
Sbjct: 1 MIRLKKKQEEAERXXXXXXXSEAMDVEQESTNGGDAKADDQDESKGGESKSSGGVKLLGIGGKKSRTGGAKKT-KKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPKVHCHTKIYHPNINLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNREAAELYRNDARQFERVVRRSLQGYSVGAEQFERLI 231
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA) HSP 1 Score: 297 bits (761), Expect = 7.920e-99 Identity = 140/180 (77.78%), Postives = 159/180 (88.33%), Query Frame = 2
Query: 257 GKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
G + +LGIGGRR K+ + KA KKTPGEIRIQKDIA+LDGG+VA ITFP+PNNL F+V V PDSG+WKGASY+FTF+IP YPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR+NI++F+R V+RTL GC M+G+ F RL+
Sbjct: 30 GGVKLLGIGGRRTKK-TGKAP-PKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A7S3M2N2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2N2_9STRA) HSP 1 Score: 293 bits (750), Expect = 5.800e-97 Identity = 142/201 (70.65%), Postives = 166/201 (82.59%), Query Frame = 2
Query: 194 VDEETPSNAAAQPKAGEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
V+ +P N A +PK EE+ AG L +LGIGG++ K G+ KA G K+TPGEIRIQKDIA+LDGGSVA++ FPNPN+LT+F V V PDSGFW GA Y FT +IPALYPH+PPKV C TKIYHPNINL+GNVCLNILRE+WKPVLDINAVIYG+IYLFYEPNP+DPLN EAA+LYR + +QFER VKRTL G GE F+RLI
Sbjct: 23 VNGNSPVNVAGEPK--EEEGAGGLSLLGIGGKQIKSGAKKA-GKKRTPGEIRIQKDIAELDGGSVAQVDFPNPNDLTNFTVTVSPDSGFWSGAKYVFTVAIPALYPHEPPKVTCRTKIYHPNINLEGNVCLNILREEWKPVLDINAVIYGMIYLFYEPNPDDPLNREAADLYRTDKNQFERVVKRTLQGYSHAGEAFERLI 220
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA) HSP 1 Score: 277 bits (709), Expect = 7.920e-91 Identity = 126/180 (70.00%), Postives = 153/180 (85.00%), Query Frame = 2
Query: 260 KLHVLGIGGRRAKRGSAKATGTKK-TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
K+ +LG+GG++ K + TG KK TPGEIRIQKDIA+LDGG VA I FPNPN+LT+F V+V PDSG+W+GA+YHF+F++P+ YPH+PPKV C TKIYHPNI+LQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R ++ QFER V RTL G V+ G F++L+
Sbjct: 35 KVSLLGVGGKKKKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPKVECHTKIYHPNIDLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVNRTLRGGVLDGVQFEKLV 214
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A7R9W2H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2H1_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.910e-90 Identity = 128/180 (71.11%), Postives = 152/180 (84.44%), Query Frame = 2
Query: 260 KLHVLGIGGRRAK-RGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
K+ +LGIGG++ K +G ++ K+TPGEIRIQKDIA+LDGG VA I FPNPN+LT+F V+V PD+GFWKGASY FTF IP YPH PPKV CETKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R +++QF+R V RTL+G ++ FQRL+
Sbjct: 82 KVSILGIGGKKKKDKGENSSSSKKRTPGEIRIQKDIAELDGGKVATIDFPNPNDLTTFHVRVTPDTGFWKGASYLFTFQIPDHYPHSPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRRDVNQFQRLVSRTLSGGILDNVQFQRLV 261
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC) HSP 1 Score: 275 bits (703), Expect = 7.900e-90 Identity = 135/223 (60.54%), Postives = 165/223 (73.99%), Query Frame = 2
Query: 131 MIRLKKKXXXXXXXXXXXAMEVDEETPSNAAAQPKAGEEKAAGKLHVLGIGGRR-AKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
M+ LKKK A + D +TP + + K+ +LG+GG++ K G KAT K++PGEIRIQKDIA+LDGG+VA I FPN N+LTSF V + PDSG+WKGA+YHFTF+IP YPH PPKV C+TKIYHPNI+LQG VCLNILREDWKPVLDIN V+YGLIYLFYEPNP+DPLNHEAAEL+R ++ QFER V RTL G ++ G F+RL+
Sbjct: 1 MLALKKKREEAKAAAEAAAKDADADTPIVDSGVGTHSPDN--NKVSLLGVGGKKQTKNGECKAT-KKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: K0T069_THAOC (UBC core domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T069_THAOC) HSP 1 Score: 273 bits (698), Expect = 4.230e-89 Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 2
Query: 260 KLHVLGIGGRRAKRGSAK-ATGTKK-TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
K+ +LGIGG++ K A+G KK TPGEIRIQKDIADLDGG VA I FPNPNNLT+F+V + PDSG+WK A+Y+F F IP YPH PPKV CETKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLI+LFYEPNP+DPLNHEAA+L+R +I QFER V+RTL G VM G F RLI
Sbjct: 38 KVSLLGIGGKKKKANDGNGASGKKKRTPGEIRIQKDIADLDGGKVANIEFPNPNNLTAFEVSITPDSGYWKNATYNFKFDIPDHYPHTPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIFLFYEPNPDDPLNHEAADLFRRDIRQFERLVQRTLRGGVMDGVHFDRLI 218
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A448YW25_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW25_9STRA) HSP 1 Score: 272 bits (696), Expect = 8.520e-89 Identity = 126/194 (64.95%), Postives = 153/194 (78.87%), Query Frame = 2
Query: 218 AAAQPKAGEEKAAGKLHVLGIGG-RRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
+ + P E+ G++ + GIGG ++ K+G + AT KKTPGEIRIQKDI +LDGG VAE+TFP PN+LTSF V + PD+G+WKGA Y F F +PA YPH PPKV C+T IYHPNI+LQG VCLNILREDW+PVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R +I FER V RTL G + G TF+RL+
Sbjct: 27 SVSAPSESTEEGGGQVSLFGIGGQKKTKKGESSAT--KKTPGEIRIQKDIGELDGGKVAEVTFPKPNDLTSFNVSITPDTGYWKGARYEFEFKVPAHYPHSPPKVECKTSIYHPNIDLQGKVCLNILREDWRPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDIQSFERLVNRTLRGGTLDGVTFERLV 218
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Match: A0A6T7JLN4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JLN4_9STRA) HSP 1 Score: 272 bits (696), Expect = 9.750e-89 Identity = 125/180 (69.44%), Postives = 150/180 (83.33%), Query Frame = 2
Query: 260 KLHVLGIGGRR-AKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFSIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 796
K+ +LGIGG++ A +G + G K+TPGEIRIQKDIA+LDGG VA I FPNPN+LT F V + PD+GFWKGA Y FTF IPA YPH+PPKV C T+IYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R +++QF R V+RTL G ++ G F+RL+
Sbjct: 43 KVSLLGIGGKKNASKGENGSGGKKRTPGEIRIQKDIAELDGGKVAIIDFPNPNDLTMFHVAITPDTGFWKGAKYDFTFQIPAHYPHNPPKVTCGTQIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDVNQFNRLVQRTLRGGILDGVPFERLV 222 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17657.1 >prot_Ecto-sp6_S_contig85.17657.1 ID=prot_Ecto-sp6_S_contig85.17657.1|Name=mRNA_Ecto-sp6_S_contig85.17657.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=223bp MIRLKKKQDDEKAAEAAAAMEVDEETPSNAAAQPKAGEEKAAGKLHVLGIback to top mRNA from alignment at Ecto-sp6_S_contig85:286181..289421+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17657.1 ID=mRNA_Ecto-sp6_S_contig85.17657.1|Name=mRNA_Ecto-sp6_S_contig85.17657.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3241bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:286181..289421+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:286181..289421+ >mRNA_Ecto-sp6_S_contig85.17657.1 ID=mRNA_Ecto-sp6_S_contig85.17657.1|Name=mRNA_Ecto-sp6_S_contig85.17657.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:286181..289421+ (Ectocarpus species6 EcLAC_371)back to top |