mRNA_Ecto-sp6_S_contig85.17656.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A6H5JCL8_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCL8_9PHAE) HSP 1 Score: 1438 bits (3723), Expect = 0.000e+0 Identity = 746/777 (96.01%), Postives = 756/777 (97.30%), Query Frame = 2
Query: 446 MMSAYANAAGGVGVAYANPAFRIVGLLDCALSDLEGVVVQVGARECILEEQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGRIKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWDWVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISSGTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLENGEPLIRRANSSDNGGPGVGGEGEFTPNGSKRKRSC 2776
MMSAYAN AGGVGVAYAN AFRIVGLLDCALSDLEGVVVQVGARECILEEQG QAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAA GS PSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLT+DELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGD GRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQE+TSRQ MIETICSEK LIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIV ALDDAFEDDAAGD AESGPTLFRERIVSPLQKAVSD+SKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQEL GTS+EMA VLK+VET+SKAPAGRIKLEFNAVHSHHLRVTKKDQAFVGKCKAA TLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTY PVLSSAAKIVAELDVLLSLCVCVHLWDWVRPRLLPVGSQTIDIKGLRHPSVEAARG GLFIPNDIKLGN+SRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISSG LCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKV QGSCDRSFGIHVARIANFPGHVVSEAETLA+CLENGEPLI RANSSDNG PGVG +GE TPNGSKRKR+C
Sbjct: 1 MMSAYANVAGGVGVAYANQAFRIVGLLDCALSDLEGVVVQVGARECILEEQGPQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAAHGSAPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTIDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDCGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEMTSRQSMIETICSEKTLIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVGALDDAFEDDAAGDKAESGPTLFRERIVSPLQKAVSDMSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELTGTSQEMASVLKNVETSSKAPAGRIKLEFNAVHSHHLRVTKKDQAFVGKCKAAHTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYTPVLSSAAKIVAELDVLLSLCVCVHLWDWVRPRLLPVGSQTIDIKGLRHPSVEAARGAGLFIPNDIKLGNDSRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISSGALCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVMQGSCDRSFGIHVARIANFPGHVVSEAETLARCLENGEPLIGRANSSDNGEPGVGSQGEMTPNGSKRKRTC 777
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A3D8R1G0_9HELO (Putative DNA mismatch repair protein msh-2 n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8R1G0_9HELO) HSP 1 Score: 482 bits (1240), Expect = 2.560e-150 Identity = 326/906 (35.98%), Postives = 499/906 (55.08%), Query Frame = 2
Query: 32 TRAERRMSDQ--FATFFRRLESI--GGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSG-----GLPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSSTWTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCALSDL----EGVVVQVGARECILE----EQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVC-VHL-WDWVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGN-NSRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADS---ASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLEN 2671
+R E ++ D+ F FF+ L S R F R Y+TAHG DA ++R +K TS + Q G GLPS+T+S+ V+ + + AL RIEVWE G S W ASPGN++ + ++ G Q + A + AV +SA A+ A VGV +A+ + R +G+ + +DL E +++Q+G +EC+++ ++ + + L I+ CG+ + +S F KD +DLA +++ A G +P ++ LA+ + AL+++L ++ DSSN G + L +L +YM DA+A KA+ + P P G SLF +LN T MG+RLL +WL+ PL+ ++EI RQ ++E + L T+++ LR IPDL R+ ++F RK + L ++ V++ V+RL + L+ + E T S L+++ L+KF + E +DLD + D + ++P F L+ + ++L EM L++ A G+ I LE + H +R+T+ + + A +S QK GV FTT +L+S A +L + Y QS +V + + VA +Y PV+ A ++A +DV++S C +H +VRP++ P G +K RHP +E + FI ND+ L +S ++TGPNM GKST+IR +G+ L+AQIG FVP EA +T+ D I ARVGASD+QL+GVSTFMAEMLET IL+ A +SL+I+DELGRGTST DGFG+AWA+++ ++ G +FATHFHELTA+ ++ VQNLHV A D A ++T+LYKV +G CD+SFGIHVA + FP VV+ A+ A LE+
Sbjct: 3 SRPELKVDDEVGFIKFFKGLPSTKDDDCFRIFDRGD---YYTAHGEDAAFIARTVYKTTSVLR-QLGRNDNTGLPSVTMSITVYRNFLREALFKLGKRIEVWESQGGRSNWKIVKQASPGNLQDVEEEL------GGQFDAAPTILAVKVSAKASEARNVGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLIQTDKSDKDPEMSKLRAIIDSCGIAISERSASDF-GTKD-IDQDLARILK------DEKAAGMLPQ------------TDLKLAMGSAAALIKYLGVLHDSSNFGQYQLYQHDLSQYMKLDASALKALNLMPGPR------------DGSKTMSLFGLLNHCKTPMGNRLLAQWLKQPLMSMEEIVKRQQLVEAFVEDTELRQTMQEEH--LRSIPDLYRLSKKFQRK---KANLEDVVNVFQVVIRLPGFIGTLEGVMD--------EQYQTPLEAEYTSRLRESNDSLAKFAEMVETTVDLDAM---DRHEYLIKPEFDDSLKMIKKKLEKLDYEMDKQLREAAKDLDAEVGKKIFLENHTKHGWVMRLTRTEAVRIRNKSAYQEVSTQKNGVYFTTQKLQSFRREADQLSQNYNRTQSSLVNEVVGVAASYCPVIEKLAGLLAHMDVIVSFAHCSIHAPTSYVRPKIHPRGQGDTVLKESRHPCLEM-QDDIQFITNDVTLKRGDSEFLLITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFSMFATHFHELTALVEQY--PQVQNLHVVAHIDDNGKAKREVTLLYKVEEGVCDQSFGIHVAELVRFPEKVVNMAKRKADELED 847
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A0C2WVI0_9AGAM (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2WVI0_9AGAM) HSP 1 Score: 479 bits (1233), Expect = 7.760e-149 Identity = 327/897 (36.45%), Postives = 497/897 (55.41%), Query Frame = 2
Query: 104 VRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVS---FQSGGLPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSSTWTRRL---SASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAG--GVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILEEQGAQA----AGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLA----------SALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAG-----RIKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLC-VCVHLWD-WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNN-SRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRK--ANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNK---LTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLEN 2671
VR F R Y+TAHG DA ++++ ++ +S + +S L S+T+S+ + + +L AK RIE+W G + T+ + ASPGN++A+ + S + D DA V+ + A G VG A A+ + R +G+ A S+LE ++VQ+G +ECI++ +G A L +++ RCGV+ T + F S KD +D+ L++ G+ V A ++ +A++A AL+R+LDLM D+SN G ++LT +LR+YM DA+A A+ + PSP R L+ A G + SL +LN+ T+ G+RL+ +WL+ PL+++ EI RQ ++E + + + L+ LR +PD+ RI +RF +K L ++ VY+A +++ ++ L+ E ++ TA L +E + P QK +++KF+ + E+ IDLD L+ Q +RP LQ L +LA E L D A G ++ LE N H + RV+K D + K LS QKAGVLFT++ L+ +K+QY QS +V + +++AGTY VL S ++A LDV++S V V+ +++P + +G+ + +K RHP +E FIPND+++ S I+TGPNM GKST+IR +G+ L+AQ+G FVP EA M + D I ARVGA D+QL+GVSTFMAEMLET IL+ A + SLVI+DELGRGTST DG+GIAWA++D + LCLFATHFHELT + E + V+N+HV A K +T+LYKV +G CD+SFGIHVA++ NFP +V A+ A+ LE+
Sbjct: 36 VRIFERGD---YYTAHGEDAIYIAQQVYRTSSVLKPLGKKSAPLQSVTLSITLAKEFLRESLTAKQLRIEIWIPEGGKKSATKFVLSKQASPGNLQAVEDLLFSHD----SDMDATVAPIVLAIRVSTADGIRTVGTASADASIRTIGIAQFAETDLFSNLESLIVQMGVKECIIQAEGKTADYDRTKLHQVLERCGVVITERKPAEF-STKD-VEQDIGRLLK----------------GDEPPVG--LPAFDLRVAMSASAALIRYLDLMRDASNFGHYTLTQHDLRQYMRLDASAVMALTLLPSP-RDSLSMMNSAGGAQPGATAAGGGSNKNSSLLGLLNRCKTAQGTRLIAQWLKQPLMNLHEIKKRQNLVELLVDQNSARRHLQ--DEFLRYMPDMHRICKRFHKKA---ANLEDVIRVYQAAIKIPDLIEHLE-GIETESLEQTA-----LIKETYIQPFQKFDENITKFKEMVEQTIDLDQLQ---NHQYVIRPEHDPSLQALADQLA----EHVAALDDEHRAVGRDLGLELDKKLHLENNQTHGYCFRVSKIDSKALAGKKKYTELSTQKAGVLFTSETLKHHSLEYAHIKDQYNRQQSSLVAEVVSIAGTYTVVLESVDDVIAHLDVIVSFAHVSVNAPSTYIKPVITEMGTGNLILKEARHPCLEVQEDVS-FIPNDVEMIRGASEFQIITGPNMGGKSTYIRQIGVIALMAQVGCFVPCTEAEMPIFDCILARVGAGDSQLKGVSTFMAEMLETATILKASTATQNSLVIIDELGRGTSTADGYGIAWAISDHIAKEIRALCLFATHFHELTKLAHEV--EHVKNIHVVAHVSDDHGKTREITLLYKVAEGVCDQSFGIHVAQLCNFPQSIVKHAKRKAEELED 883
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A3B4DMJ9_PYGNA (DNA mismatch repair protein n=3 Tax=Characoidei TaxID=1489739 RepID=A0A3B4DMJ9_PYGNA) HSP 1 Score: 476 bits (1226), Expect = 5.110e-148 Identity = 326/905 (36.02%), Postives = 489/905 (54.03%), Query Frame = 2
Query: 71 FFRRLESIGGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSGG---LPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSST-----WTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILEEQGAQAAG----LEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWD--WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRMT-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLENGEPLIRRANSSDNGGP 2719
FF E VR F RS Y+T HG DA ++E FK + G L S+ +S F S V LL + +R+EV++ +GS + W ASPGN+ + G G G E AA + + + VGV Y + R +G+ + S+LE ++VQ+G +EC+L G AG L +++ R G+L + + F + KD ++DL L++ G ++ ++P E +A++ L A++++L+L+ D +N G+F +T +L +YM D AA +A+ +F Q++S D SL +LN+ T G RL+ +WL+ PL+D +I R ++E+ + L + ++ +LR PDL R+ ++ R Q L VY+AV +L +V+AL+ L +SP + +SD SKFQ + E +D++ + + V+PSF L L + + + M L AG+ +KLE NA ++ RVT K++ + K TL VQK GV FT +L S++ + +E+YE+ Q+ IV + I++A Y L + +++A+LD ++S V H +VRPR+L GS + +KG RHP VEA + FIPND+ +M I+TGPNM GKST+IR VG+ L+AQIG FVP +EA ++V+D + ARVGA D+Q++GVSTFMAEMLET AILR A SL+I+DELGRGTST DGFG+AWA+++ + + + CLFATHFHELTA+ Q+ V NLHVTA ++ LTMLY+V G CD+SFGIHVA +ANFP HV++ A A LE + + R + GP
Sbjct: 23 FFSMPEKPDTTVRVFDRSD---YYTVHGKDALFAAKEVFKTNGVIKHLGSGSRRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNKSGSKSSKDHDWQIAFKASPGNLTQFEEILFGGGGLG---EGAAGVVGIRLGTGGDGQRVVGVGYVDSTLRKMGVCEFPDNDQFSNLEALLVQIGPKECLLP--GGDVAGDVGKLRQVIQRGGILLSDRKKAEF-TTKD-IVQDLNRLLKA--CKGETVSSAALPE------------MEKQIAVSCLAAVIKYLELLSDEANFGSFRMTTFDLNQYMRLDNAAVQALNLF------QVSS-----DDPSGTHSLAGLLNKCRTPQGQRLVNQWLKQPLIDKNKIEERLDLVESFVEDSELRQSCQED--LLRRFPDLNRLAKKLQR---QSANLQDCYRVYQAVGQLPGLVLALERH---------TGKHQILLNAAFISPFKDLISDFSKFQEMIETTLDMNQIEHHE---FLVKPSFDPTLSELRENMDQLEKNMQATLNSAARELGLDAGKTVKLESNAQMGYYFRVTCKEEKNLRNNKKFTTLDVQKNGVRFTNSKLSSMNEEYIKNREEYEEAQNAIVKEIISIAAGYVEPLQTLNEVIAQLDAVVSFAVVSHAAPVPYVRPRILEKGSGRLILKGARHPCVEA-QDDVAFIPNDVTFTRGEQMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALAQQV--PTVCNLHVTALTTDST--LTMLYRVRNGVCDQSFGIHVAELANFPKHVIANAREKALELEEFQDISRVDKEGVDAGP 870
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A5A9PTN7_9TELE (DNA mismatch repair protein n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PTN7_9TELE) HSP 1 Score: 474 bits (1221), Expect = 1.180e-147 Identity = 319/888 (35.92%), Postives = 483/888 (54.39%), Query Frame = 2
Query: 104 VRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSGG---LPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSST---WTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILE--EQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWD--WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRM-TIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLENGEPLIRRANSSDNG 2713
VR F R+ Y+T HG DA ++E FK + + G L + ++ F + V LL +++R+EV+ + SS W SPGN+ + G G E AA V + ++ VGV Y + R +G+ + S+LE ++VQ+G +EC+L + G L++++ R GVL T + F + KD ++DL L++ A G S SA + + + + +++L+A++++L+L+ D N GTF +T +L +YM D AA +A+ +F G + SL +LN+ T G RL+ +W++ PL D +I R ++E + L + ++ +LR PDL R+ ++F R Q L VY+AV +LS +V+AL+ + + L + +SP +SD KFQ + E +D++ + + V+PSF L L + + G + M L AG+ IKL+ NA + RVT K++ + K TL VQK GV FT +L S++ T+ +E+YE+ Q+ IV + I++A Y + + +++A+LD ++S V H +VRP++L GS + +K RHP VEA + FIPND+ M I+TGPNM GKST+IR VG+ L+AQIG FVP +EA ++V+D + ARVGA D+Q++GVSTFMAEMLET AILR A +SL+I+DELGRGTST DGFG+AWA+++ + + + CLFATHFHELT + Q+ V+NLHVTA + N LTMLYKV G CD+SFGIHVA +ANFP HV+++A A LE + R SD G
Sbjct: 9 VRIFDRND---YYTVHGKDALFAAKEVFKTNGVIKYLGTGKNRLEGVVLNKSNFETFVRDLLLVRHYRVEVYRNASKSSKDHDWQLVFKGSPGNLTQFEEILFGSGGPG---EAAAGVVGVRLGTGSDGQRVVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGVLLTERKKSEFIT-KD-IVQDLNRLLK--------ARKGETVS--SAGLPEM----DRQIGISSLEAVIKYLELLSDEGNFGTFKITTFDLNQYMRLDHAAVQALNLFQ-----------GSSEDKTGTHSLAGLLNKCRTPQGQRLVNQWIKQPLRDKNKIDERLDLVEAFVEDSELRKSCQED--LLRRFPDLNRLAKKFQR---QSCNLQDCYRVYQAVGQLSGLVLALERY---------SGNHQVLLQAAFISPFNDLISDFCKFQEMIETTLDMNQIEHHE---FLVKPSFDPTLSELRECMDGLEKAMQAALSSAARELGLEAGKTIKLDSNAQIGYFYRVTCKEEKSLRNNKKFTTLDVQKNGVRFTNSKLSSLNDEYTKSREEYEEAQNAIVKEIISIASGYVDPVQTLNEVIAQLDAVVSFAVVTHAAPVPYVRPKILEKGSGRLILKASRHPCVEA-QDDVAFIPNDVTFSRGKEMFQIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLETAAILRSATEESLIIIDELGRGTSTYDGFGLAWAISEHIATRIKSFCLFATHFHELTVLAQQV--PTVRNLHVTAL--TTDNTLTMLYKVKPGVCDQSFGIHVAELANFPKHVIAKAREKAMELEEFQDFSRVEEGSDAG 841
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A162IL51_9EURO (DNA mismatch repair protein MSH3 n=1 Tax=Ascosphaera apis ARSEF 7405 TaxID=392613 RepID=A0A162IL51_9EURO) HSP 1 Score: 474 bits (1219), Expect = 1.820e-147 Identity = 328/909 (36.08%), Postives = 492/909 (54.13%), Query Frame = 2
Query: 32 TRAERRMSDQ--FATFFRRLESIG----GLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQS---GGLPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSSTWTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCALSDL----EGVVVQVGARECILEEQGA----QAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDV-ETASKAPAGRIKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLC-VCVHL-WDWVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKL-GNNSRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTA------EADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLEN 2671
+R E ++ D+ F FFR L S G +R F R Y+TAHG DA+ ++R +K TS + GLPS+T++V VF +L+ AL R+E+W G S W A+PGN++ + D+ +G G +E AV +A A+ VGV +A+ + R +G+ + A +DL E +V+Q+G +ECIL + A + L +I++ C + T + F KD +DL+ L+R + + ++ E+ LA+ A ALV++L +M D+SN G + + L +YM DAAA +A+ + P P G + SL+ +LN T +G+RLL +WL+ PL++ +EI RQ ++E ++ L T+++ LR IPDL R+ ++F + TL ++ VY+ V+RL I+ L+ E E T E+ S L+ ++ K + E +DLD L D + ++P F LQ + +L E M ++V + + P ++ LE + VH R+T+ + + + S QK GV FTT ++S +L Y QS +V + + VA +Y P++ A ++A LDV++SL V V+ +VRP++ P G+ +K RHP +E + FI ND+ L + + I+TGPNM GKST+IR +G+ L+AQIG FVP EA +T+ D I ARVGASD+QL+GVSTFMAEMLET +ILR A +SL+I+DELGRGTST DGFG+AWA++ +I+ LFATHFHELTA+E EK V NLHV A E K+T+LY+V G CD+SFGIHVA + FP VV+ A A LE+
Sbjct: 3 SRPELKVDDEYGFIRFFRSLSSKGEDEENTIRVFDRGD---YYTAHGNDAERIARMVYKTTSVIRTLGRGDNGLPSVTLTVTVFRNLLREALFKLGMRVEIWAN-TGRSNWKMVKQATPGNLQDVEEDLGTG---GTLNELPPVILAVKYTAKASEGRLVGVCFADASVRELGVSEFADNDLFSNFESMVIQLGVKECILPAESAKKDPELQKLRQILSNCDITITQRPGSDF-GVKD-IEQDLSRLLR-----------------DEVTAAGMSPVTELKLAMGAAAALVKYLGVMHDASNFGQYRIYQHNLSEYMKLDAAAVRALNLLPGPR------------DGSKNMSLYGLLNHCKTPVGNRLLSQWLKQPLMNNEEIEKRQQLVEAFVNDTELRQTMQEDH--LRAIPDLYRLAKKFQKG---LATLEDVVRVYQVVIRLPGIINTLEGVME--------EQYQTCLEEQYTSNLRTYSNNFGKLAEMVETTVDLDAL---DRHEFIIKPEFDDTLQIIKNKLDRLREAMDDEHREVGKDLGQEPDKKLFLENHRVHGWCFRLTRTEAGCIRNKREYQECSTQKNGVYFTTTNMQSYRREHDQLSSNYNRTQSGLVREVVNVAASYCPLIEQTAAVLAHLDVIVSLAHVSVNAPTPYVRPKIHPRGTGNTILKAARHPCMEM-QDDMTFITNDVSLIRDKASFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETASILRSATSESLIIIDELGRGTSTYDGFGLAWAISQHIITEIKCFALFATHFHELTALE-EKFPNAVHNLHVIAFISDDEEGAERKRKVTLLYQVESGVCDQSFGIHVAELVRFPQKVVNMARQKADELED 855
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A6J2VGL6_CHACN (DNA mismatch repair protein n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VGL6_CHACN) HSP 1 Score: 474 bits (1219), Expect = 5.240e-147 Identity = 320/897 (35.67%), Postives = 481/897 (53.62%), Query Frame = 2
Query: 71 FFRRLESIGGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSGG---LPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSST-----WTRRLSASPGNV---EAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILE---EQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWD--WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRMT-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLENGEPLIR 2689
+F E VR F R+ Y+T HG DA ++E FK + G L S+ +S F S V LL + +R+EV+ AG + W ASPGN+ E I+ S G GEG AA V + + +GV Y + R +G+ + S+LE ++VQ+G +EC+L + G A L +++ R G+L + + F + KD ++DL L++ GE+ S E +A+++L A++++L+L+ D SN +F + +L +YM D AA +A+ +F G D SL +LN+ T G RLL +W++ PL+D +I R ++E + L + ++ +LR PDL R+ ++F R Q L Y+AV ++ ++V+AL+ + + L VSPL +D +KFQ + E +D++ + + V+PSF L L + + + M L AG+ +KLE NA + RVT K++ + K TL VQK GV FT +L S++ T+ +E+YE+ Q+ IV + I +A Y L + ++A+LD ++S + H ++RP++L G+ + +KG RHP VEA + FIPND+ M I+TGPNM GKST+IR VG+ L+AQIG FVP +EA ++V+D + ARVGA D+QL+GVSTFMAEMLET AILR A SL+I+DELGRGTST DGFG+AWA+++ + + + CLFATHFHELTA+ Q+ V+NLHVTA ++ LTMLY+V +G CD+SFGIHVA +ANFP HV++ A A LE + + R
Sbjct: 23 YFSMSEKPDTTVRIFDRND---YYTVHGKDAIFAAKEVFKTNGVIKNLGSGSRKLESVVLSKMNFESFVRDLLLVRQYRVEVYRNKAGGKSSKDHDWQVAFKASPGNLAQFEEILFGSSGGPGEG-----AAGVVGVRIGTGGDGQRVIGVGYVDSTLRQLGVCEFPDNDQFSNLEALLVQIGPKECVLPGGGDGGGDLAKLRQVVQRGGILMSDRKKAEF-TTKD-IVQDLNRLLKA-------------RKGETVS-SAALPEMERQIAMSSLAAVIKYLELLSDESNFDSFKMITFDLNQYMRLDNAAVQALNLFQ-----------GSSDDATGTHSLAGLLNKCRTPQGQRLLNQWIKQPLIDRNKIEERLDLVEAFVDDSELRQSCQED--LLRRFPDLNRLAKKFQR---QNANLQDCYRAYQAVGQIPNLVLALERY---------SGNHQVLLNAAFVSPLNDLNTDFAKFQEMIETTLDMNQIEHHE---FLVKPSFDPTLSELRENMDRLEKNMQATLTSAARELSLEAGKTVKLESNAQIGYFFRVTCKEEKNLRNNKKFTTLDVQKNGVRFTNSKLSSLNEEYTKNREEYEEAQNAIVKEIINIAAGYVDPLHTLNDVIAQLDAVVSFALVSHAAPVPYIRPKVLEKGAGRLVLKGARHPCVEA-QDDVAFIPNDVSFSRGEEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAEISVVDCVLARVGAGDSQLKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALAQQV--PTVRNLHVTALTTDST--LTMLYRVKKGVCDQSFGIHVAELANFPKHVIANAREKALELEEFQDISR 862
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: W5UE85_ICTPU (DNA mismatch repair protein n=4 Tax=Siluroidei TaxID=1489793 RepID=W5UE85_ICTPU) HSP 1 Score: 473 bits (1216), Expect = 1.400e-146 Identity = 321/889 (36.11%), Postives = 479/889 (53.88%), Query Frame = 2
Query: 71 FFRRLESIGGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSGG---LPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSST-----WTRRLSASPGNV---EAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILE--EQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWD--WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRMT-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLE 2668
+F E VR F RS Y+T HG DA ++E FK + G L S+ +S F + V LL K +R+EV+ AG + W ASPGN+ E ++ G GEG AA + + ++ VGV Y + R +G+ + S+LE ++VQ+G +EC+L + L +++ R G+L + + F + KD ++DL L++ GE+ S E +A++ L A++++L+L+ D +N +F +T +L +YM D AA +A+ +F + + D SL +LN+ T G RL+ +WL+ PL+D +I R ++E+ + L + ++ +LR +PDL R+ ++F R Q L VY+AV +L ++V AL+ A L ++PL VSD SKFQ + E +D++ + + V+PSF L L + + + M L AG+ IKLE NA + RVT K++ + K TL VQK GV FT+ +L S++ T+ +E+YE+ Q+ IV + I++A Y L + ++A+LD ++S V H +VRPR+L G+ + +KG RHP VEA + FIPND+ M I+TGPNM GKST+IR VG+ L+AQ+G FVP +EA ++V+D + ARVGA D+Q++GVSTFMAEMLET AILR A SL+I+DELGRGTST DGFG+AWA+++ + + + C+FATHFHELTA+ Q+ V NLHVTA + N LTMLY+V G CD+SFGIHVA +ANFP HV++ A A LE
Sbjct: 23 YFSMPEKPDTTVRIFDRSD---YYTVHGKDAAFAAKEVFKTNGVIKMLGAGSRRLESVVLSKMNFEAFVRDLLLVKQYRVEVYRNKAGGKSSKDHDWQIAYKASPGNLTQFEEVLFGSGGGLGEG-----AAGVVGIRVGTGSDGQRVVGVGYVDGILRKLGVCEFPDNDQFSNLEALLVQIGPKECVLPAGDTVGDLGKLRQVVQRGGILLSDRKKAEF-TTKD-IVQDLNRLLKA-------------RKGETVS-SAALPEMEKQIAVSCLAAVIKYLELLSDEANFSSFKMTTFDLSQYMRLDNAAVQALNLFQASS-----------DDPTGTHSLAGLLNKCRTPQGQRLVSQWLKQPLMDKNKIEERLDLVESFVEDSELRQSCQED--LLRRVPDLNRLAKKFQR---QNANLQDCYRVYQAVGQLPALVQALERH---------AGKHQVLLNAAFITPLNDLVSDFSKFQEMIETTLDMNQIEHHE---FLVKPSFDPTLSELRESMDQLEKSMQAALNSAARELSLDAGKTIKLESNAQIGYFFRVTCKEEKTLRNNKKFTTLDVQKNGVRFTSSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPLQTLNDVIAQLDAVVSFSVVSHAAPVPYVRPRILEKGTGRLVLKGARHPCVEA-QDDVAFIPNDVTFTKGKEMFHIITGPNMGGKSTYIRQVGVIVLMAQVGCFVPCDEAEVSVVDSVLARVGAGDSQIKGVSTFMAEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCVFATHFHELTALAQQV--PTVNNLHVTAL--TTDNTLTMLYRVKTGVCDQSFGIHVAEMANFPKHVIAYAREKALELE 854
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A8M1KJ24_CLUHA (LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2 n=3 Tax=Clupeidae TaxID=55118 RepID=A0A8M1KJ24_CLUHA) HSP 1 Score: 472 bits (1215), Expect = 1.910e-146 Identity = 322/880 (36.59%), Postives = 478/880 (54.32%), Query Frame = 2
Query: 137 YFTAHGLDADLVSREAFKNTSAVSFQSGG---LPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGS---STWTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGLLDCA----LSDLEGVVVQVGARECILE--EQGAQAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKAPAGR-IKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLCVCVHLWD--WVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNNSRMT--IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLENGEPLIRRANSSDNGGP 2719
Y+T HG DA ++E FK + G L S+ +S F S V LL + +R+EV+ AG + W ASPGN+ A +I G G G E A + + + + VGV Y + R VG+ + S+LE ++VQ+G +EC+L + G A + +++ R GVL + + F + KD ++DL L+R GES S E +A++ L A++++L+L+ D +N ++ +T +L ++M D AA A+ +FP DS SL +LN+ T G RL+ +W++ PL+D +I R ++E+ + L + ++ +LR PDL R+ ++F R TL Y+AV L ++V+AL L ++PL V D SKFQ + E +D++ + + V+PSF L L + + + M VL AG+ +KLE NA H + RVT K++ + K TL VQK GV FT +L S++ T+ +E+YE+ Q+ IV + + +A Y L + +++A+LD ++S + H +VRPR+L GS + +KG RHP VEA + FIPND+ S+ T I+TGPNM GKST+IR VG+ L+AQIG FVP EEA ++V+D + ARVGA D+Q++GVSTFMAEMLET AILR A SL+I+DELGRGTST DGFG+AWA+++ + + + CLFATHFHELTA+ Q+ V NLHVTA + + LTMLY+V +G CD+SFGIHVA +ANFP HV++ A A LE + L + + D+ GP
Sbjct: 42 YYTVHGKDAIYAAKEVFKTNGVIKNLGSGSKKLESVVLSKMNFESFVRDLLLVRQYRVEVYRNKAGGKKENDWQIEYKASPGNL-AQFEEILFGGG-GAPGEGVAGVVGIRVGSGPDGQRVVGVGYVDSILRKVGVCEFPDNDQFSNLEALLVQIGPKECVLPVGDAGGDAGKMRQVVLRGGVLLSDRKKSEF-TTKD-IVQDLDRLLRA-------------RKGESVS-SAALPEMEKQIAVSCLAAVIKYLELLSDEANFNSYKITSFDLHQFMRLDNAAVNALNLFPG------------SDSTVASHSLSGLLNRCRTPQGQRLVNQWIKQPLIDKNKIEERLDLVESFMEDSELRQSCQED--LLRRFPDLNRLAKKFQR---HSATLQDCYRAYQAVGHLPALVLALQRY---------NGKHEVLLSAVFITPLNDLVLDFSKFQDMIETTLDMNQIEHHE---FLVKPSFDPTLSELRESMDKLEKGMQAVLTSGAKELGLDAGKTMKLESNAQHGYFFRVTCKEEKGLRNNKKFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEILGIASGYLDPLHTLNEVIAQLDAVVSFALVSHAAPVPYVRPRMLEKGSGRLLLKGSRHPCVEA-QDDVAFIPNDVSF-TRSKETFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCEEAEVSVVDCVLARVGAGDSQIKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEHIATELRSFCLFATHFHELTALAQQL--PNVHNLHVTAL--TTHDTLTMLYRVKKGVCDQSFGIHVAELANFPPHVIASAREKALELEEFQDLSPQE-AGDSEGP 867
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Match: A0A6G1GDQ0_9PEZI (DNA mismatch repair protein MSH2 n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GDQ0_9PEZI) HSP 1 Score: 471 bits (1213), Expect = 2.270e-146 Identity = 338/926 (36.50%), Postives = 503/926 (54.32%), Query Frame = 2
Query: 29 GTRAERRMSDQ--FATFFRRLESIGG-LVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSAVSFQSG---GLPSITISVKVFSSLV-PALLAKNFRIEVWEQLAGSSTWTRRLSASPGNVEAIMADISSGEGEGRQDEDAASGTAVMMSAYANAAGGVGVAYANPAFRIVGL---LDCAL-SDLEGVVVQVGARECILEEQGA----QAAGLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGVGGGAAATGSVPSGESADVSHVAAAREMTLALAALQALVRHLDLMEDSSNHGTFSLTMDELRKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTSMGSRLLREWLQHPLVDVQEITSRQCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRVTLATLLGVYRAVMRLSSIVVALDDAFEDDAAGDTAESGPTLFRERIVSPLQKAVSDLSKFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMA----GVLKDVETASKAPAGRIKLEFNAVHSHHLRVTKKDQAFVGKCKAALTLSVQKAGVLFTTDRLRSVDARATRLKEQYEDVQSKIVLQAITVAGTYNPVLSSAAKIVAELDVLLSLC-VCVHL-WDWVRPRLLPVGSQTIDIKGLRHPSVEAARGGGLFIPNDIKLGNN-SRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISS-GTLCLFATHFHELTAIEQEKGGKGVQNLHVTA------EADSASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCLEN----GEPLIRRANSSD 2707
G+R + ++ D+ F FFR L + G VR F R + ++TAHG DA L++R ++ TS + Q G GL S+T+SV VF + + AL R+EVWE G W ASPGN++ I D+ G Q + A AV ++A A A VGV +A+ + R +G+ LD L S+LE +++Q+GAREC+++ A A + I+ CG ++ F A +DL+ L+R A G +P ++ LA+ + AL+R+L +M DSSN G + L +L +YM DA+A +A+ + P P G SL+ +LN T +GSRLL +WL+ PL++V+EI RQ ++E + AL T+++ LR IPDL R+ ++F RK L ++ Y+ +RL + LD A D+ D E + + L++ + L+K Q + E +DL+ L D + ++P F L+ + + L EM + +D++ ++ LE + VH LRVT+ + + + + S QK GV FTT L++ RL E Y QS +V + + VA +Y PV+ A ++A LDV++SL V VH + RP++ G+ +K RHP +E + FI ND+ L + S I+TGPNM GKST+IR +G+ L+AQ+G FVP EA +T+ D I ARVGASD+QL+GVSTFMAEMLET IL+ A ++SLVI+DELGRGTST DGFG+AWA+++ ++ G LFATHFHELTA+ VQNLHV A + + ++T+LYKV G CD+SFGIHVA + FP V++ A+ A LE+ E L ++A+ D
Sbjct: 2 GSRPDLKVDDEVGFIRFFRNLPTTNGDTVRIFDRGE---FYTAHGEDAQLIARTVYRTTSVIR-QLGREPGLDSVTLSVTVFRNFLREALFRLGKRVEVWESSGGRMNWKITKRASPGNLQDIEDDL------GGQIDSAPIILAVKITARAAEARHVGVCFADASVRELGVCEFLDNDLYSNLESLLIQLGARECLVQADAAGKNVDLAKIRAIVDNCGCALAERASSDF--ATRDIEQDLSRLLRE------ERAAGVLPQ------------MDLKLAMGSAAALLRYLGIMSDSSNFGQYQLYQHDLSQYMKLDASAVRALNLMPGPR------------DGAKTMSLYGLLNHCKTPIGSRLLAQWLKQPLMNVEEIERRQQLVEAFVEDTALRQTMQEEH--LRSIPDLYRLAKKFQRKA---ANLEDVVRTYQVSIRLPGFLGLLD-AVMDERYQDALE-------KEYTTKLREYSNSLAKLQEMVETTVDLEAL---DNHEFIIKPEFDDSLRTIRKRLDKLKYEMGVEQRKIAQDLDLDMDK---KLFLENHRVHGWCLRVTRAESSCIRGKRQYQECSTQKNGVYFTTSTLQAYRREFDRLSETYNRTQSGLVNEVVGVAASYCPVIEKLAGVIAHLDVIVSLAHVSVHAPTPYTRPKMHARGTGNTILKEARHPCMEM-QDDVQFITNDVTLERSKSEFLIITGPNMGGKSTYIRQIGVIALMAQVGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKTATKESLVIIDELGRGTSTYDGFGLAWAISEHIVREIGAFALFATHFHELTALVDSY--PQVQNLHVVAHISDDDDGSQSKREVTLLYKVEPGVCDQSFGIHVAELVRFPTKVINMAKRKADELEDFSGKHEKLTKQASKED 863 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17656.1 >prot_Ecto-sp6_S_contig85.17656.1 ID=prot_Ecto-sp6_S_contig85.17656.1|Name=mRNA_Ecto-sp6_S_contig85.17656.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=910bp MSDQFATFFRRLESIGGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSback to top mRNA from alignment at Ecto-sp6_S_contig85:273078..281827- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17656.1 ID=mRNA_Ecto-sp6_S_contig85.17656.1|Name=mRNA_Ecto-sp6_S_contig85.17656.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8750bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:273078..281827- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:273078..281827- >mRNA_Ecto-sp6_S_contig85.17656.1 ID=mRNA_Ecto-sp6_S_contig85.17656.1|Name=mRNA_Ecto-sp6_S_contig85.17656.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2730bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:273078..281827- (Ectocarpus species6 EcLAC_371)back to top |