mRNA_Ecto-sp6_S_contig85.17622.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: D7FMG8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG8_ECTSI) HSP 1 Score: 586 bits (1510), Expect = 7.190e-205 Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 1
Query: 1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTE 867
MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSL+GTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLAN AYIADGTKGAAMRNPTE
Sbjct: 1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTE 289
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JLH9_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH9_9PHAE) HSP 1 Score: 358 bits (918), Expect = 4.770e-115 Identity = 184/327 (56.27%), Postives = 229/327 (70.03%), Query Frame = 1
Query: 580 YRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRA-VHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIWG 1557
Y DR LCWLMMLR+ CFH M L+GP +TF R+F+WMT QA TL L DEI WP+ EER+AQ FLA HP L N A+I DGTK MR P +P+DG + A V+ HYS+NKGLGY+H +Y N RGKP+RVET G SDR A+ SR++L+P FL+ GE G+GDG Y G+AR D TG MCVP + +LT +R FN++QRR+RVVVENTIGQ+KK+RVIG G+F H RD EP VFELC +LTARIMRVR+ +PRS+EWL + WE+KLG+FL+ D + SYLVH D Y++ T +A +LQ RW IWG
Sbjct: 3 YLDRALCWLMMLRQDFCFHTMADLWGPSAATFQREFVWMTTQATTLEILNDEIQWPTAEERRAQGEFLARVAHPDLGNIAFIIDGTKS-LMRIPAKPRDGITQDPTAEVNDMHYSNNKGLGYTHQIYCNIRGKPLRVETRRGAESDRGAYNNSRVYLQPTEFLSPGEVGLGDGGYVGEARAD-TGEAMCVPLR-GGHLTEAERGFNARQRRIRVVVENTIGQVKKWRVIGTGKFRHHRDLEPAVFELCTKLTARIMRVRDKFPRSKEWLWKEYEEWEAKLGIFLFADTENPQSYLVHNFGADLLYNS-ATPNGRATVLQHRWNVIWG 325
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JMX0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX0_9PHAE) HSP 1 Score: 275 bits (702), Expect = 9.520e-82 Identity = 175/447 (39.15%), Postives = 229/447 (51.23%), Query Frame = 1
Query: 247 EERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYP---DGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGHL------FRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIW 1554
E+ R ++ +++ L+PG GRG+SEAN AS R L +P GIY A T+ + TGF + EFDDF+ A D EG+L F+ R+ G+ TP EN ARRTI+G++ +DRVLC++ MLRR F +M+ +G + T+ +F MT+ A +PCL +VETV G LSDR A +S +F PD FL+ E GMGDGNYRG AR DS + MC P PN+ E R +N +QRR RVVVENTIGQIKKF+ +G G+ F HQRDFE HVF +CARLTARIMRVRN YPRSE W+ ++ WE+KLG+ + D + YL+H E+ YD T + AE LQ W+AIW
Sbjct: 69 EDMRRATMYKQQLKKIKPLIPGVGRGKSEANLLASRKRTALVFPAEQGGIYGA---HTSSQIRYKTGFTKEEFDDFFAATHIDREGNLLPRSWFFQQARNNLGKHTPEENQARRTIRGSMSDQDRVLCYVEMLRRDTSFEDMSLKYGRSKGTWSNEFHDMTMAAQDMPCLQ------------------------------------------------------------------------------------QVETVRGSLSDRGALLSSDVFQHPDQFLSADEVGMGDGNYRGLARADSNDMYMCAPHP-GPNVPPEGRRYNREQRRFRVVVENTIGQIKKFKTVGNGKAFRHQRDFEKHVFNVCARLTARIMRVRNKYPRSEAWIGDKKEEWEAKLGIHYYWDYDEPGCYLIHNEGENLVYDN--TIEGTAEGLQEAWDAIW 425
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KIX2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX2_9PHAE) HSP 1 Score: 239 bits (609), Expect = 3.450e-69 Identity = 142/297 (47.81%), Postives = 171/297 (57.58%), Query Frame = 1
Query: 583 RDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSP--NLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLV 1464
RDRVLCWL MLRR F +M G TF +F MT A +P L +EI WP ER A FL HP AYIADGT MRNP + G+P+ VH +YS NKGLG SHIVY N R + G SD GMGDG Y G+AR DS L MCVP++ +L++E+R FN++QRR RVVVENT+GQIKK++ +G G+ F H+RDFE VF++CARLTARIMRVR+ YPRS EW WE KLG+ L+ D D SYLV
Sbjct: 4 RDRVLCWLEMLRRDTLFEDMALACGRCAGTFHNEFKDMTAAAQNMPSLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSRNKGLGTSHIVYCNVRDR-------DGGWSD----------------------GMGDGAYLGNARADSD-LPMCVPYRKPQQGDLSNEERRFNTEQRRFRVVVENTVGQIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDGYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLV 269
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KWG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG0_9PHAE) HSP 1 Score: 159 bits (401), Expect = 4.750e-40 Identity = 93/212 (43.87%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 382 GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
GIY+A ++ + TG ++EFD FY D EG+ LF R+ G ++ +N ARR I+G++ RDRVLCWL MLRR CF +M +G T+ +F T A +PCL +EI WP ER A FL HP AYIADGT MRNP + G+P+ VH +YS NKGLG SHIVY N RGKPIRV +
Sbjct: 93 GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTCFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 300
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KLU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU9_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.940e-38 Identity = 87/191 (45.55%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 445 RNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
++EFDDFY D EG+ LF R+ G ++ +N ARR I+G++ RDRVLCWL MLRR F +M +G T+ +F T A +PCL +EI WP ER A FL HP AYIADGT MRNP + G+P+ VH +YS NKGLG SHIVY N RGKPIRV +
Sbjct: 3 KDEFDDFYEDMFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSIDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 192
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KI20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI20_9PHAE) HSP 1 Score: 151 bits (381), Expect = 9.880e-37 Identity = 127/445 (28.54%), Postives = 173/445 (38.88%), Query Frame = 1
Query: 247 EERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIWG 1557
E+ RG +++ G LLP GR + GIY+A ++ + TG ++EFD FY D EG+ LF R+ G ++ +N ARR I+G++ RDRVLCWL MLRR F +M +G T+ +F T A +PCL +E A GD L++E+R FN++QRR RVV ENTIG+IKK++ +G G+ F H+RDFE VF++CARLTARIMRVR+ YPRS EW WE KLG+ L+ D D SYLVH E Y + + A+ LQ W++IW
Sbjct: 64 EDMRRGLTYRHSLKKLGPLLPRIGREGFPSEEG------------GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSCLFGQARNHVGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEAA------------------------------------------------------------------------------------------------------------------AGD-------------------------LSNEERRFNTEQRRFRVVAENTIGKIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDRYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLVHN--EGENYVYGVANEGTAQHLQQCWDSIWA 352
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A7S4JHM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JHM0_9EUKA) HSP 1 Score: 135 bits (340), Expect = 1.610e-30 Identity = 98/347 (28.24%), Postives = 158/347 (45.53%), Query Frame = 1
Query: 451 EFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL--AATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHN-------KGLGYSHIVYVNARGKPIRVET-VSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQ-----FSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKL--GVFLWMDP 1440
EF+D + D + R+ R+ D +FT ENS R+ R+R+ +LM R F + G ++ DF+W+ Q P LV E+ WP +A+ L A P Y+ DGTK RN HY H KG G +H+++ N GKP+ + G +D AA+ + ++ +PDA+L +G+ DG ++ +++T + Q +P + N QQR +R +E T G IK++ ++ + F D + F LC +LTAR+MRVR+ YPR +W+ + WE + +L++DP
Sbjct: 109 EFEDLHN----DVLDVLRLSRNSDCRFTEEENSLRKKRHFKFSSRERLFHFLMFCRHYPTFRKGGADVGMSKAALRGDFVWLRAQLKVHPLLVAEVQWPEPAAVEAERLLLVEAGLLGPGFEMCVYMCDGTKDLGRRN-----------------AHYGHKHEPDYSQKGNGKTHLLFTNLFGKPMMCAAGIQGCENDPAAYQMTHIYRDPDAYLLPNHSGLFDGVFQNALHVNTTESGVLPASQPELRKAAPPMRKMLAKMNKQQRYLRCPIEQTFGMIKQWGIVSDTVFRGSLDQQGDNFLLCTQLTARLMRVRDQYPRGAKWMRGEKEAWEEEWERDGWLYIDP 434
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5K1A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1A5_9PHAE) HSP 1 Score: 108 bits (271), Expect = 5.420e-23 Identity = 84/242 (34.71%), Postives = 111/242 (45.87%), Query Frame = 1
Query: 19 DSGDEEQRREAMCVAASLL----IVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVD 732
+ G EQ+R+ AA+ L +++ TQ E+ E E L E+ L+ + G L I + ER V + + LP G+G SEAN AASN RR + + +G TT G +A+ G L R + EN ARR I+GT+ YRDR LCWLMMLR+ CFH M L+GP +TF RDF+WMT QA TL L D
Sbjct: 4 EEGFTEQQRQLHAQAAAWLQERNVIELMTQLEEAEEEMGRLGDDDEAAYALSKQMGALGQQAEAGLQEILAIAQSVPESPGERAFRHTQLVSVNKLRRFLPTVGKGMSEANDAASNNRRQMVHAEGA------TTTSVLDPGMGV---------SARSGSTQALTRRSSTNSMRSWEDENMARRRIRGTMGYRDRALCWLMMLRQDFCFHTMEDLWGPSAATFQRDFVWMTTQATTLELLND 230
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF6_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.140e-14 Identity = 64/202 (31.68%), Postives = 90/202 (44.55%), Query Frame = 1
Query: 223 FGMASHGVEERIRGSLVGTCVREA-----GKLLPGPGRGRSEANAAASNTRRNLKYPD---GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQF-TPAE------NSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL 783
F + G + G+L G R + G + G G S AN AS R L++P GI++A + + TG ++E D FY G+ T +E N ARR I+G++ RDRVLCWL +LRR F ++ +G T+ +F MT A +PCL EI WP E+ A FL
Sbjct: 28 FTILGEGQQAAWHGNLAGRWKRSSLHLTEGIVQAGGWWGNSTANGTASRARLPLRFPSEEGGIHDA---HRSSQIRYKTGMEKDEVDAFYEDTFWMLRETVSPAHGCLGELGTTSETTRRRTNKARRVIRGSMDDRDRVLCWLEILRRDTLFEDVALAYGRCAGTYHNEFKDMTAAAQNMPCLQVEIQWPEPAEQAAHCTFL 226 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig85.17622.1 >prot_Ecto-sp6_S_contig85.17622.1 ID=prot_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=522bp MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDback to top mRNA from alignment at Ecto-sp6_S_contig85:9756..13879- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig85.17622.1 ID=mRNA_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4124bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:9756..13879- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:9756..13879- >mRNA_Ecto-sp6_S_contig85.17622.1 ID=mRNA_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1566bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:9756..13879- (Ectocarpus species6 EcLAC_371)back to top |