mRNA_Ecto-sp6_S_contig85.17622.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig85.17622.1
Unique NamemRNA_Ecto-sp6_S_contig85.17622.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: D7FMG8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG8_ECTSI)

HSP 1 Score: 586 bits (1510), Expect = 7.190e-205
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 1
Query:    1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTE 867
            MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSL+GTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLAN AYIADGTKGAAMRNPTE
Sbjct:    1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTE 289          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JLH9_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH9_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 4.770e-115
Identity = 184/327 (56.27%), Postives = 229/327 (70.03%), Query Frame = 1
Query:  580 YRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRA-VHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIWG 1557
            Y DR LCWLMMLR+  CFH M  L+GP  +TF R+F+WMT QA TL  L DEI WP+ EER+AQ  FLA   HP L N A+I DGTK   MR P +P+DG  +   A V+  HYS+NKGLGY+H +Y N RGKP+RVET  G  SDR A+  SR++L+P  FL+ GE G+GDG Y G+AR D TG  MCVP +   +LT  +R FN++QRR+RVVVENTIGQ+KK+RVIG G+F H RD EP VFELC +LTARIMRVR+ +PRS+EWL  +   WE+KLG+FL+ D  +  SYLVH    D  Y++  T   +A +LQ RW  IWG
Sbjct:    3 YLDRALCWLMMLRQDFCFHTMADLWGPSAATFQREFVWMTTQATTLEILNDEIQWPTAEERRAQGEFLARVAHPDLGNIAFIIDGTKS-LMRIPAKPRDGITQDPTAEVNDMHYSNNKGLGYTHQIYCNIRGKPLRVETRRGAESDRGAYNNSRVYLQPTEFLSPGEVGLGDGGYVGEARAD-TGEAMCVPLR-GGHLTEAERGFNARQRRIRVVVENTIGQVKKWRVIGTGKFRHHRDLEPAVFELCTKLTARIMRVRDKFPRSKEWLWKEYEEWEAKLGIFLFADTENPQSYLVHNFGADLLYNS-ATPNGRATVLQHRWNVIWG 325          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JMX0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX0_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 9.520e-82
Identity = 175/447 (39.15%), Postives = 229/447 (51.23%), Query Frame = 1
Query:  247 EERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYP---DGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGHL------FRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIW 1554
            E+  R ++    +++   L+PG GRG+SEAN  AS  R  L +P    GIY A    T+   +  TGF + EFDDF+ A   D EG+L      F+  R+  G+ TP EN ARRTI+G++  +DRVLC++ MLRR   F +M+  +G  + T+  +F  MT+ A  +PCL                                                                                     +VETV G LSDR A  +S +F  PD FL+  E GMGDGNYRG AR DS  + MC P    PN+  E R +N +QRR RVVVENTIGQIKKF+ +G G+ F HQRDFE HVF +CARLTARIMRVRN YPRSE W+ ++   WE+KLG+  + D  +   YL+H   E+  YD   T +  AE LQ  W+AIW
Sbjct:   69 EDMRRATMYKQQLKKIKPLIPGVGRGKSEANLLASRKRTALVFPAEQGGIYGA---HTSSQIRYKTGFTKEEFDDFFAATHIDREGNLLPRSWFFQQARNNLGKHTPEENQARRTIRGSMSDQDRVLCYVEMLRRDTSFEDMSLKYGRSKGTWSNEFHDMTMAAQDMPCLQ------------------------------------------------------------------------------------QVETVRGSLSDRGALLSSDVFQHPDQFLSADEVGMGDGNYRGLARADSNDMYMCAPHP-GPNVPPEGRRYNREQRRFRVVVENTIGQIKKFKTVGNGKAFRHQRDFEKHVFNVCARLTARIMRVRNKYPRSEAWIGDKKEEWEAKLGIHYYWDYDEPGCYLIHNEGENLVYDN--TIEGTAEGLQEAWDAIW 425          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KIX2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX2_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 3.450e-69
Identity = 142/297 (47.81%), Postives = 171/297 (57.58%), Query Frame = 1
Query:  583 RDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSP--NLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLV 1464
            RDRVLCWL MLRR   F +M    G    TF  +F  MT  A  +P L +EI WP   ER A   FL    HP     AYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N R +        G  SD                      GMGDG Y G+AR DS  L MCVP++     +L++E+R FN++QRR RVVVENT+GQIKK++ +G G+ F H+RDFE  VF++CARLTARIMRVR+ YPRS EW       WE KLG+ L+ D  D  SYLV
Sbjct:    4 RDRVLCWLEMLRRDTLFEDMALACGRCAGTFHNEFKDMTAAAQNMPSLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSRNKGLGTSHIVYCNVRDR-------DGGWSD----------------------GMGDGAYLGNARADSD-LPMCVPYRKPQQGDLSNEERRFNTEQRRFRVVVENTVGQIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDGYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLV 269          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KWG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG0_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 4.750e-40
Identity = 93/212 (43.87%), Postives = 118/212 (55.66%), Query Frame = 1
Query:  382 GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
            GIY+A    ++   +  TG  ++EFD FY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR  CF +M   +G    T+  +F   T  A  +PCL +EI WP   ER A   FL    HP     AYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N RGKPIRV  +
Sbjct:   93 GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTCFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 300          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KLU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU9_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.940e-38
Identity = 87/191 (45.55%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  445 RNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
            ++EFDDFY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR   F +M   +G    T+  +F   T  A  +PCL +EI WP   ER A   FL    HP     AYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N RGKPIRV  +
Sbjct:    3 KDEFDDFYEDMFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSIDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 192          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5KI20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI20_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 9.880e-37
Identity = 127/445 (28.54%), Postives = 173/445 (38.88%), Query Frame = 1
Query:  247 EERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIWG 1557
            E+  RG      +++ G LLP  GR    +               GIY+A    ++   +  TG  ++EFD FY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR   F +M   +G    T+  +F   T  A  +PCL +E A                                                                                                                   GD                         L++E+R FN++QRR RVV ENTIG+IKK++ +G G+ F H+RDFE  VF++CARLTARIMRVR+ YPRS EW       WE KLG+ L+ D  D  SYLVH   E   Y   +  +  A+ LQ  W++IW 
Sbjct:   64 EDMRRGLTYRHSLKKLGPLLPRIGREGFPSEEG------------GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSCLFGQARNHVGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEAA------------------------------------------------------------------------------------------------------------------AGD-------------------------LSNEERRFNTEQRRFRVVAENTIGKIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDRYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLVHN--EGENYVYGVANEGTAQHLQQCWDSIWA 352          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A7S4JHM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JHM0_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 1.610e-30
Identity = 98/347 (28.24%), Postives = 158/347 (45.53%), Query Frame = 1
Query:  451 EFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL--AATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHN-------KGLGYSHIVYVNARGKPIRVET-VSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQ-----FSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKL--GVFLWMDP 1440
            EF+D +     D   + R+ R+ D +FT  ENS R+        R+R+  +LM  R    F +     G  ++    DF+W+  Q    P LV E+ WP     +A+   L  A    P      Y+ DGTK    RN                  HY H        KG G +H+++ N  GKP+     + G  +D AA+  + ++ +PDA+L    +G+ DG ++    +++T   +    Q      +P +       N QQR +R  +E T G IK++ ++ +  F    D +   F LC +LTAR+MRVR+ YPR  +W+  +   WE +     +L++DP
Sbjct:  109 EFEDLHN----DVLDVLRLSRNSDCRFTEEENSLRKKRHFKFSSRERLFHFLMFCRHYPTFRKGGADVGMSKAALRGDFVWLRAQLKVHPLLVAEVQWPEPAAVEAERLLLVEAGLLGPGFEMCVYMCDGTKDLGRRN-----------------AHYGHKHEPDYSQKGNGKTHLLFTNLFGKPMMCAAGIQGCENDPAAYQMTHIYRDPDAYLLPNHSGLFDGVFQNALHVNTTESGVLPASQPELRKAAPPMRKMLAKMNKQQRYLRCPIEQTFGMIKQWGIVSDTVFRGSLDQQGDNFLLCTQLTARLMRVRDQYPRGAKWMRGEKEAWEEEWERDGWLYIDP 434          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5K1A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1A5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 5.420e-23
Identity = 84/242 (34.71%), Postives = 111/242 (45.87%), Query Frame = 1
Query:   19 DSGDEEQRREAMCVAASLL----IVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLVGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVD 732
            + G  EQ+R+    AA+ L    +++  TQ E+ E E   L    E+   L+ +    G      L  I +          ER         V +  + LP  G+G SEAN AASN RR + + +G        TT       G          +A+ G    L R       +    EN ARR I+GT+ YRDR LCWLMMLR+  CFH M  L+GP  +TF RDF+WMT QA TL  L D
Sbjct:    4 EEGFTEQQRQLHAQAAAWLQERNVIELMTQLEEAEEEMGRLGDDDEAAYALSKQMGALGQQAEAGLQEILAIAQSVPESPGERAFRHTQLVSVNKLRRFLPTVGKGMSEANDAASNNRRQMVHAEGA------TTTSVLDPGMGV---------SARSGSTQALTRRSSTNSMRSWEDENMARRRIRGTMGYRDRALCWLMMLRQDFCFHTMEDLWGPSAATFQRDFVWMTTQATTLELLND 230          
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Match: A0A6H5JZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.140e-14
Identity = 64/202 (31.68%), Postives = 90/202 (44.55%), Query Frame = 1
Query:  223 FGMASHGVEERIRGSLVGTCVREA-----GKLLPGPGRGRSEANAAASNTRRNLKYPD---GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQF-TPAE------NSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL 783
            F +   G +    G+L G   R +     G +  G   G S AN  AS  R  L++P    GI++A     +   +  TG  ++E D FY                  G+  T +E      N ARR I+G++  RDRVLCWL +LRR   F ++   +G    T+  +F  MT  A  +PCL  EI WP   E+ A   FL
Sbjct:   28 FTILGEGQQAAWHGNLAGRWKRSSLHLTEGIVQAGGWWGNSTANGTASRARLPLRFPSEEGGIHDA---HRSSQIRYKTGMEKDEVDAFYEDTFWMLRETVSPAHGCLGELGTTSETTRRRTNKARRVIRGSMDDRDRVLCWLEILRRDTLFEDVALAYGRCAGTYHNEFKDMTAAAQNMPCLQVEIQWPEPAEQAAHCTFL 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FMG8_ECTSI7.190e-20599.31Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JLH9_9PHAE4.770e-11556.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JMX0_9PHAE9.520e-8239.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KIX2_9PHAE3.450e-6947.81DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KWG0_9PHAE4.750e-4043.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLU9_9PHAE1.940e-3845.55Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI20_9PHAE9.880e-3728.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4JHM0_9EUKA1.610e-3028.24Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6H5K1A5_9PHAE5.420e-2334.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZF6_9PHAE1.140e-1431.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:9756..13879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2055
Hectar predicted targeting categoryother localisation
Exons4
Cds size1566
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350476.9318154-UTR-Ecto-sp6_S_contig85:9755..102441682350476.9318154-UTR-Ecto-sp6_S_contig85:9755..10244Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig85 9756..10244 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350476.947472-CDS-Ecto-sp6_S_contig85:10244..108261682350476.947472-CDS-Ecto-sp6_S_contig85:10244..10826Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 10245..10826 -
1682350476.9579835-CDS-Ecto-sp6_S_contig85:11832..119491682350476.9579835-CDS-Ecto-sp6_S_contig85:11832..11949Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 11833..11949 -
1682350476.9681768-CDS-Ecto-sp6_S_contig85:12466..126011682350476.9681768-CDS-Ecto-sp6_S_contig85:12466..12601Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 12467..12601 -
1682350476.978553-CDS-Ecto-sp6_S_contig85:13147..138791682350476.978553-CDS-Ecto-sp6_S_contig85:13147..13879Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig85 13148..13879 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17622.1prot_Ecto-sp6_S_contig85.17622.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig85 10245..13879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig85.17622.1

>prot_Ecto-sp6_S_contig85.17622.1 ID=prot_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=522bp
MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESD
AMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLVGTCVREAGK
LLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRN
EFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLC
WLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPS
MEERQAQAAFLAATFHPRLANAAYIADGTKGAAMRNPTEPKDGRPKVRRA
VHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLE
PDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQ
QRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRV
RNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDATSYLVHGLVEDAEYDTD
MTAQQKAELLQGRWEAIWGAA*
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mRNA from alignment at Ecto-sp6_S_contig85:9756..13879-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig85.17622.1 ID=mRNA_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4124bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:9756..13879- (Ectocarpus species6 EcLAC_371)
ATGGATGGCCATGAAAGCGACAGTGGCGATGAGGAGCAGCGCCGTGAGGC GATGTGTGTTGCAGCGTCACTGCTGATCGTCGACAGTGCCACCCAGACTG AGCAGGAAGAGGCCGAGTTCGAGGATTTGCATAAGAGACTCGAGAGCGAC GCCATGCTTGCAGCGGAGACCGCGGTGGAAGGCGACGGTGAGAGCGATGA CCTCTTCGGGATAGGGTCCCCTTTCGGCATGGCGAGCCACGGGGTAGAAG AGAGGATCAGGGGTTCGTTGGTGGGCACCTGTGTGAGAGAGGCGGGGAAG TTGTTGCCTGGACCCGGGCGTGGACGGAGCGAGGCAAACGCCGCAGCATC GAACACGCGGCGAAACCTCAAATACCCGGACGGCATATATGAGGCGTGGT GCCAGGAGACTACGTGCCCTTTCCAACGCAACACGGGATTTAGGCGCAAC GAGTTCGACGACTTCTACACAGCGCAGGGCGGAGACGAAGGGCATCTCTT CAGAGTTCCAAGGGACATCGACGGGCAGTTCACGCCAGCTGAGAACAGTG CGCGACGTACGATCAAGGGAACGCTCCGCTACCGCGACCGAGTCCTGTGT TGGCTCATGATGCTTCGCAGGGGGTGTTGCTTCCACGAGATGACGACCTT GTTCGGGCCTGGCGAGTCGACCTTCTGCCGAGACTTTCTGTGGATGACGA TCCAGGCCGCAACTCTTCCTTGTCTGGTTGACGTGAGTTATGGTTGCATC GCTATGTGATTTGTACTCGTATTTCACACGCGTTCAGAGGCATCGCGATG TACCGTAAATGACACAAGATACCACGCCCCCAGGAACGAATGCCAAAGCT CAATTCCTCCACAGCAGTGCAAATAGTGCCGTTGCCGACACGTGTGGAGT TGGGACCGCGTCGTCGAGATAATTCCAAATACACGTCCTTTGATGTAGGG TTACTGTTGGTCGTGTCGTCAAGCTTTGTACATTAGACCGGGTGTGGTAT CTTACGTCACCCGCTGCTCCGTGTACATAGGACATGATAGTAGACCGCAC GCAGTCCGTAGTCGAGACCGCGTGTACGCTGAGCAGGTGGCGTACTGCTG TAGGAGCCTATAGGTTGTGATAGGTGAGGTTGTCAGCGGCGAACTTGAGC GGGCGACATTTTATGGCAATAACCTACACGAACACCCATACCTATGGCCT GACGCCGACCCTCACATGCACCCCCCCACACACACACACACAAAATGCAC GCGCTTGCGACGTCGACATACTAAGCAGGAGATTGCGTGGCCGTCCATGG AAGAGCGTCAGGCACAGGCTGCTTTCCTCGCCGCCACTTTTCACCCTAGG CTTGCCAACGCCGCCTACATTGCGGACGGTACAAAGGGAGCCGCAATGCG CAATCCTACGGAGGTAGGTTGTCAACGTTTATTTCGAGTGTTTTATCTGG GAATGGCTGAGGGCTAGGGTCAGCGGCTGCGGGGTCCGCTATGGCTTTTA ATGTTCAAGGAGCGGATTGGTGTCGCTTCCCTTCGATTGCTTAGAGAAAC GCAGTTCGAACGGGATGGGCTAGGGCTTGTTGCTCGAGAAAACAGGCGGC AAGGCATGAGCTGGAAGGGCTTAGCTCCATCGTGTAAAGGTCACATTACA CGGCATAGGTTAGGCAGCCGAGAACCTCCAAATCACCCTTGGATTTTCGC TCAGTGTGTTTTGGGAAACTCCTCCCCGAATGCAGCAAGTATTTGCGCTT TCGATCGCCACAATGCCGCTACACACGTGCAGGTAGGTACATGACTGCGC TGTGCCTGGTGTGAAGGCGACTTCAGGCCAGATGTTGAAAGGGATACCTG CGGGCCCTTCGTTCGCTATCGGATCTCGCCTAACACACCACCCCCACCCC ACGGCGAACATGACACCCCCTCCTACGCAGCCCAAGGATGGTCGCCCGAA GGTTCGCAGGGCAGTGCACGGCCAGCACTACTCCCACAACAAGGGCCTGG GCTATAGCCACATCGTGTATGTCAACGCCCGGGGCAAACCAATACGGGTG AGATATCTCTACGAATGAAACTGAGTGTCGTACCTTCATTTGTAGCGGCA TGGCTTTGGCACAAAGGGTTACCTTGGGCATGAACGCGCGGTCGTCTGTT CCACGGGCCAACTGTTGGGCATTAAAATCGAAAGTGTTGGGGTAGGGACT GGGCGCCACTGGCTGTGGCTCATGTTTGCCTATCCGTCCCGGGCTGTCCA CCGTGCAAAACATCGCGCACTGCCTCAATGGTGTGTGCGTTGCGCCTCGC TCTCCCTCTTGTTGTCATCCCCCCCGACTCGCTACGAATACGAACGGTGA CCAGTACCTCCTCAGTGATTTTTAGCTACGTTATTTCACACAACCAACGA ACAGCACACTTCCCCAATAGTACACAACGAACAAGTTGGCAGCTGCTGAA CCCTGTGTGCACGCCTGGCTCTGTGTTTGTCAGTGACGGATGTTCCCCGT TTGTCACGGGGGTTCCACGTTGGTCGCTGATCGGTGACCTTCATCTCACG AGCAAACGCAACAGCAGGCGACCCTACTTGTGGGCTGAAGTTGGTCACAG CAGCGTCCTTCGTATGTACCTACCCTACAGTAGTAACTTGAAAAAATCCC GCCTCTGTCCGTGGTCGGTCGAGCGTCCCCACGCTTCGCGTCGTTCCCGA CCTAGCTAGCGACTTTCGGGCAATATGGAGGCACCAAGGCTGGGTTTTGT GGGACCCAGTCAAAATGATATTGTAGTGCTCGGGCACAAGTGCTGCCTTG CAGTTCGGTGCGTAGGTGGTGGAACAGGCATCAAGCTTGTTTGTGTGAGC TCAACGCATGCACCAGAGAGCACCGACGCCATATTGTTTTACTACCTTGC GCCAAGCGTTTGCATGTGTAGGTGCGCTAGGGATGAAAGATGGTGAGAAA GTAACTGCCCACCGCGGGTCATGGCCTGGACGGTGCGGCGTTGTCATTTC TTCCTGCCTCATGTCCCCCGTGTTCAACCTTTTCCGCGAACGTATCGATA TAGGTGGAAACGGTATCTGGGCGGCTGTCTGACCGAGCTGCCCACACGGC CTCAAGGCTGTTCTTGGAGCCGGATGCGTTCCTGACGTTAGGGGAGACGG GTATGGGCGACGGCAACTATCGCGGGGATGCGAGGATGGACTCAACGGGC CTCGAGATGTGTGTCCCGTTCCAGTTTTCACCCAACTTGACGCATGAGCA AAGGGATTTCAACTCTCAGCAGAGGAGGGTCCGTGTTGTGGTGGAGAATA CGATTGGCCAAATCAAGAAGTTCCGAGTCATCGGGGAGGGGAGATTTGAT CACCAGCGGGACTTCGAGCCGCATGTGTTTGAGTTGTGTGCAAGGTTGAC GGCGAGGATAATGCGCGTGCGGAACGCCTACCCCCGCAGCGAGGAGTGGT TAGTGAACCAGGTCTCGACATGGGAGTCGAAGCTCGGGGTGTTCTTGTGG ATGGACCCCGGCGATGCGACGTCGTATCTAGTTCACGGTTTGGTTGAGGA CGCGGAATACGACACTGACATGACTGCCCAGCAGAAGGCTGAACTGCTGC AGGGCCGGTGGGAAGCAATCTGGGGGGCAGCGTAGCGGATTCCTCGCAGG TTGCAACTTGTCTAGCGTACATGTTTTGAGGTAATTGCCTCTCTGGTTTG AATGTAGCGAAGATTTTATAATTAGAAGCCTATCCCAACCCTGGAAAAGC CTTCCGAGGTGTGCAAGCCCCTATGGGGGCACGCCGGAGAGCAAAACACC ATGGTAGCAGTAGGTTTGTTGCGTCAGGGTTTGGCCGTGCCTGACCTACG TCATCAACAGCATTTCATGATTGCGAGGCTTGTATGTGAGTAGCGCTCGG GGTCTCCCTCCACGGACAGTGACGAGCACAAGTCTCTCGTAGCACAGACT CGTCGCACCGCTCGAAGCAAATGTGCAGGCGCGGCGCAGTGCACGCGCCT TGTCCTTGGACGAAAAGATAAAGATGCCAGACGGCTGATATATAGTGATG TGTCTCGATTGACGTCCCGGCATGGGCCTGGACAGTGTACAAACCAACGG GACAACGGAATCGAAAAACACTGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig85:9756..13879-

>mRNA_Ecto-sp6_S_contig85.17622.1 ID=mRNA_Ecto-sp6_S_contig85.17622.1|Name=mRNA_Ecto-sp6_S_contig85.17622.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1566bp|location=Sequence derived from alignment at Ecto-sp6_S_contig85:9756..13879- (Ectocarpus species6 EcLAC_371)
ATGGATGGCCATGAAAGCGACAGTGGCGATGAGGAGCAGCGCCGTGAGGC
GATGTGTGTTGCAGCGTCACTGCTGATCGTCGACAGTGCCACCCAGACTG
AGCAGGAAGAGGCCGAGTTCGAGGATTTGCATAAGAGACTCGAGAGCGAC
GCCATGCTTGCAGCGGAGACCGCGGTGGAAGGCGACGGTGAGAGCGATGA
CCTCTTCGGGATAGGGTCCCCTTTCGGCATGGCGAGCCACGGGGTAGAAG
AGAGGATCAGGGGTTCGTTGGTGGGCACCTGTGTGAGAGAGGCGGGGAAG
TTGTTGCCTGGACCCGGGCGTGGACGGAGCGAGGCAAACGCCGCAGCATC
GAACACGCGGCGAAACCTCAAATACCCGGACGGCATATATGAGGCGTGGT
GCCAGGAGACTACGTGCCCTTTCCAACGCAACACGGGATTTAGGCGCAAC
GAGTTCGACGACTTCTACACAGCGCAGGGCGGAGACGAAGGGCATCTCTT
CAGAGTTCCAAGGGACATCGACGGGCAGTTCACGCCAGCTGAGAACAGTG
CGCGACGTACGATCAAGGGAACGCTCCGCTACCGCGACCGAGTCCTGTGT
TGGCTCATGATGCTTCGCAGGGGGTGTTGCTTCCACGAGATGACGACCTT
GTTCGGGCCTGGCGAGTCGACCTTCTGCCGAGACTTTCTGTGGATGACGA
TCCAGGCCGCAACTCTTCCTTGTCTGGTTGACGAGATTGCGTGGCCGTCC
ATGGAAGAGCGTCAGGCACAGGCTGCTTTCCTCGCCGCCACTTTTCACCC
TAGGCTTGCCAACGCCGCCTACATTGCGGACGGTACAAAGGGAGCCGCAA
TGCGCAATCCTACGGAGCCCAAGGATGGTCGCCCGAAGGTTCGCAGGGCA
GTGCACGGCCAGCACTACTCCCACAACAAGGGCCTGGGCTATAGCCACAT
CGTGTATGTCAACGCCCGGGGCAAACCAATACGGGTGGAAACGGTATCTG
GGCGGCTGTCTGACCGAGCTGCCCACACGGCCTCAAGGCTGTTCTTGGAG
CCGGATGCGTTCCTGACGTTAGGGGAGACGGGTATGGGCGACGGCAACTA
TCGCGGGGATGCGAGGATGGACTCAACGGGCCTCGAGATGTGTGTCCCGT
TCCAGTTTTCACCCAACTTGACGCATGAGCAAAGGGATTTCAACTCTCAG
CAGAGGAGGGTCCGTGTTGTGGTGGAGAATACGATTGGCCAAATCAAGAA
GTTCCGAGTCATCGGGGAGGGGAGATTTGATCACCAGCGGGACTTCGAGC
CGCATGTGTTTGAGTTGTGTGCAAGGTTGACGGCGAGGATAATGCGCGTG
CGGAACGCCTACCCCCGCAGCGAGGAGTGGTTAGTGAACCAGGTCTCGAC
ATGGGAGTCGAAGCTCGGGGTGTTCTTGTGGATGGACCCCGGCGATGCGA
CGTCGTATCTAGTTCACGGTTTGGTTGAGGACGCGGAATACGACACTGAC
ATGACTGCCCAGCAGAAGGCTGAACTGCTGCAGGGCCGGTGGGAAGCAAT
CTGGGGGGCAGCGTAG
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