mRNA_Ecto-sp6_S_contig84.17620.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig84.17620.1
Unique NamemRNA_Ecto-sp6_S_contig84.17620.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 556 bits (1433), Expect = 6.400e-200
Identity = 272/280 (97.14%), Postives = 276/280 (98.57%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVW 840
            MYDEHIHLPTEESGKLDLV+EQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKT VCWDAAVEKIRTDKQYTEKTFDVYN+DGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGR RIL LAMA+QSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVN RPQVEAGHAVRKRQLTTSFAYRKKHKKDIV+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 9.490e-184
Identity = 263/311 (84.57%), Postives = 268/311 (86.17%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYT----------------------------EKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDE IHLPTEESGKLD VM+QYDRLGFTGA+GSMDVTHIAWSRCPYNQARSYTGKEGFPTI YQVTVDHAGRAIAVTEGFTGSTNDKTIVCWD AVEKI TDK YT                            EKTFDVYNEDGTTTTLKGCY+LVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAM YQSQERIDNVFFTC ILHNMLHTFDGMDQLVENTNWVSSAGVG T  TEPEAD GSVGTKDVND+PQ+E  H VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  128 MYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 1.390e-173
Identity = 245/283 (86.57%), Postives = 252/283 (89.05%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHIHLP EESGKL  VM+QYDRLG                 CPYNQARSYTGK+ FPTI YQVTVDHA RAIAVTEGFTGSTNDKTIVCWDAAV+KIRTDKQYTEKTFD+YNEDGTTTTLKGCY L DNGYHKWQILIEPSKYPLSE+DLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT  TEPEAD GS GTKDVND+PQ+E GH VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:   63 MYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 2.640e-153
Identity = 211/250 (84.40%), Postives = 229/250 (91.60%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDR 750
            MYDEHI+LP+E++G+LD VM+QYDRLGF+GAMGSMDVTHI WS+CPYN ARSYTGKEG PT+GYQVTV+HAGRAIAVTEGFT STNDKT VCWDA VEKIRTD QYTEKTFDVYNEDGTTTTLKGCY+LVDNGYHKW+IL+EP+KYPLSEND+LFSKRLESVRKDVECFFGILKG FRI K+AMAY  QERIDNVFFTCCILHNMLHTFDGMDQLVENT WVSSAG GT   TE EADS +VG KD ND+
Sbjct:  141 MYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 3.000e-153
Identity = 218/283 (77.03%), Postives = 242/283 (85.51%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHI LP+EE+G+LD VM QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM  L E+ NWV SA +  TS      DS SVGTKD+ND+PQVEA HA  KR+LTT+F YRKKHKKDIVWLSR
Sbjct:  170 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSG--HNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.180e-131
Identity = 209/283 (73.85%), Postives = 219/283 (77.39%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHIHL  EESGKLD V+    R G+                CPYNQARSYTGKEGFPTI YQV                      TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKG Y+LVDNGYHKWQILIEPSKYPLSENDLLFSKRL+SVR+D     GILKGRFRILKLAMAYQSQERID+VFFTCCI+HNMLHTFDGMDQLVENT  VSSAGVG T  TE EAD GSVG +DVND+PQ+E G  VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  215 MYDEHIHLLAEESGKLDHVV----RSGWVYG-------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JTS2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS2_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.180e-126
Identity = 194/247 (78.54%), Postives = 204/247 (82.59%), Query Frame = 1
Query:  145 QARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNG------------YHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            +A S+T + G PTI YQVTVDHAGRAIAVTEGFTGSTNDKTI CWDAAVEKIRTDKQYT+KTFDVYNEDGTTTTLKGCY+LVDNG            +  WQILIEPSK PLSENDLLFSKRLES             GR R LKLAM YQSQERIDNVFFTCCILHNMLHTFDG+DQLVENTNWVSSAGVG T  TEPE+D GSVGTKDVND+PQ+E GH VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  162 RAASWTTQGGVPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIFCWDAAVEKIRTDKQYTDKTFDVYNEDGTTTTLKGCYLLVDNGTEPVFAFHLSVVFFHWQILIEPSKNPLSENDLLFSKRLES-------------GRVRTLKLAMVYQSQERIDNVFFTCCILHNMLHTFDGIDQLVENTNWVSSAGVGATLATEPESDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 395          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 1.450e-117
Identity = 180/285 (63.16%), Postives = 207/285 (72.63%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVN---DRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            MY EHI LPT +  K   VM QYDRLGF+GA GS DVTHI W  CPYNQARSYTGKEG+PT+ YQVTVDH  R +AVT GFTGSTNDK+I+ +D AV KIR D  Y+EK F VY  DGT   LKGCY+LVDNGYHKW  LI PSKYP+ +NDL FSKRLESVRKDVECFFGI+KGRFRILKL++ Y  QE IDNVFFTCCILHNMLH++D   ++ E  NW  +AG+       P  D  SVG K  +   +  +VE+G   R++QL  SF YRK  K DI WLS
Sbjct:  201 MYAEHIFLPTGDYQKK--VMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKS-KNDIAWLS 482          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.720e-116
Identity = 170/283 (60.07%), Postives = 210/283 (74.20%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKD-VNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            +YDE+++LPT E   L  VMEQYDR+GF GA+GS DVTHI W  CPYNQAR YTGKEG PT+ +QVTVDH+GR +AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+ + +Y +DG     KGCY+LVDNGYHKW+ LI PSK P+   DL+FSKRLES RKDVEC+FGILKGRFRI KLA+ +  QE IDNVFFTCCILHNMLH+FD    + E  NW  SAG+   +  +P  D  SVG+ D  ++  +VE G    + +L T+F YR++ K+DIVWLS
Sbjct:  126 LYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 2.990e-115
Identity = 170/283 (60.07%), Postives = 210/283 (74.20%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKD-VNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            +YDE+++LPT E   L  VMEQYDR+GF GA+GS DVTHI W  CPYNQAR YTGKEG PT+ +QVTVDH+GR +AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+ + +Y +DG     KGCY+LVDNGYHKW+ LI PSK P+   DL+FSKRLES RKDVEC+FGILKGRFRI KLA+ +  QE IDNVFFTCCILHNMLH+FD    + E  NW  SAG+   +  +P  D  SVG+ D  ++  +VE G    + +L T+F YR++ K+DIVWLS
Sbjct:  217 LYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK2_ECTSI6.400e-20097.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNX4_9PHAE9.490e-18484.57DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE1.390e-17386.57DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE2.640e-15384.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE3.000e-15377.03Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE1.180e-13173.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTS2_9PHAE1.180e-12678.54DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE1.450e-11763.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.720e-11660.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.990e-11560.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:763890..765123 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score562.0
Seed ortholog evalue1.6e-157
Seed eggNOG ortholog2880.D7FSK2
Model size852
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
Cds size852
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350476.4610558-CDS-Ecto-sp6_S_contig84:763889..7643331682350476.4610558-CDS-Ecto-sp6_S_contig84:763889..764333Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig84 763890..764333 -
1682350476.472778-CDS-Ecto-sp6_S_contig84:764715..7651231682350476.472778-CDS-Ecto-sp6_S_contig84:764715..765123Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig84 764716..765123 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17620.1prot_Ecto-sp6_S_contig84.17620.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig84 763890..765123 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig84.17620.1

>prot_Ecto-sp6_S_contig84.17620.1 ID=prot_Ecto-sp6_S_contig84.17620.1|Name=mRNA_Ecto-sp6_S_contig84.17620.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=284bp
MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQA
RSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKI
RTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSE
NDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCC
ILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNDR
PQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR*
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mRNA from alignment at Ecto-sp6_S_contig84:763890..765123-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig84.17620.1 ID=mRNA_Ecto-sp6_S_contig84.17620.1|Name=mRNA_Ecto-sp6_S_contig84.17620.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1234bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:763890..765123- (Ectocarpus species6 EcLAC_371)
ATGTACGATGAACACATCCACCTCCCTACGGAAGAGAGCGGCAAGCTGGA CCTCGTCATGGAGCAGTACGACCGGCTTGGGTTTACGGGTGCGATGGGTT CTATGGACGTAACACATATCGCTTGGAGCAGGTGCCCCTACAACCAAGCC CGTTCGTACACTGGCAAGGAGGGGTTTCCCACGATCGGGTACCAGGTCAC CGTTGATCACGCTGGCCGGGCTATTGCCGTGACCGAGGGCTTCACCGGCT CGACGAACGACAAGACCATCGTCTGCTGGGATGCCGCGGTGGAGAAGATT CGGACGGACAAGCAGTACACGGAGAAGACGTTCGACGTGTACAACGAGGA TGGCACGACGACGACGCTCAAGGGGTGCTACGTGCTCGTCGACAACGGGT ACCACAAGGTGGATGCATTTGAAGTACCGTGTGGTTGACTTGCCAAAATA TTGTTTTGGAAGAGACATGTGTCCGGCCTGAGACAGATAGACAGAGAAAG AGAGAGCGCTGGCGAGCAACGTCTTTGTTGTCGGGGAAAATGACGGAGCA GCTAGTTTCGGACAGTTTCGACGCCAATCGTTCATGGTATTGACGTGTCG GATACGGAAATCAAAACCTCGGCTGCACGCTCTTGCAGTCTACTCCGGTG TTTCATGGGTGGCTGCTGTTATTTTTCGAGCGCCTCCTTCCAACCTCGAA GCCCCCGCTTGAGTCTCCGAGTGTAAATTTCACAGCTTTTAACAACATAG AACCAAACTCGTACCCCTTCTCCCTCTCGCGTTTTTCCAGTGGCAAATCC TGATCGAGCCCTCCAAGTACCCGCTGAGCGAGAACGACCTGCTCTTTTCG AAGAGGCTGGAGAGCGTGCGGAAGGACGTCGAGTGCTTCTTCGGCATCCT GAAGGGTCGCTTTAGGATCCTGAAGCTCGCCATGGCGTACCAGAGCCAGG AGCGCATCGACAACGTGTTTTTCACGTGCTGCATCTTGCACAACATGCTG CACACCTTCGACGGCATGGACCAGCTGGTGGAGAACACGAACTGGGTCAG CAGTGCCGGGGTGGGGACCACATCGGTGACGGAGCCGGAGGCGGACTCTG GATCTGTTGGGACGAAGGACGTCAACGACAGGCCTCAAGTGGAGGCAGGG CACGCGGTGCGCAAGCGGCAGCTCACCACGAGCTTCGCGTACCGCAAGAA GCACAAGAAGGACATTGTGTGGCTTTCTAGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:763890..765123-

>mRNA_Ecto-sp6_S_contig84.17620.1 ID=mRNA_Ecto-sp6_S_contig84.17620.1|Name=mRNA_Ecto-sp6_S_contig84.17620.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:763890..765123- (Ectocarpus species6 EcLAC_371)
ATGTACGATGAACACATCCACCTCCCTACGGAAGAGAGCGGCAAGCTGGA
CCTCGTCATGGAGCAGTACGACCGGCTTGGGTTTACGGGTGCGATGGGTT
CTATGGACGTAACACATATCGCTTGGAGCAGGTGCCCCTACAACCAAGCC
CGTTCGTACACTGGCAAGGAGGGGTTTCCCACGATCGGGTACCAGGTCAC
CGTTGATCACGCTGGCCGGGCTATTGCCGTGACCGAGGGCTTCACCGGCT
CGACGAACGACAAGACCATCGTCTGCTGGGATGCCGCGGTGGAGAAGATT
CGGACGGACAAGCAGTACACGGAGAAGACGTTCGACGTGTACAACGAGGA
TGGCACGACGACGACGCTCAAGGGGTGCTACGTGCTCGTCGACAACGGGT
ACCACAAGTGGCAAATCCTGATCGAGCCCTCCAAGTACCCGCTGAGCGAG
AACGACCTGCTCTTTTCGAAGAGGCTGGAGAGCGTGCGGAAGGACGTCGA
GTGCTTCTTCGGCATCCTGAAGGGTCGCTTTAGGATCCTGAAGCTCGCCA
TGGCGTACCAGAGCCAGGAGCGCATCGACAACGTGTTTTTCACGTGCTGC
ATCTTGCACAACATGCTGCACACCTTCGACGGCATGGACCAGCTGGTGGA
GAACACGAACTGGGTCAGCAGTGCCGGGGTGGGGACCACATCGGTGACGG
AGCCGGAGGCGGACTCTGGATCTGTTGGGACGAAGGACGTCAACGACAGG
CCTCAAGTGGAGGCAGGGCACGCGGTGCGCAAGCGGCAGCTCACCACGAG
CTTCGCGTACCGCAAGAAGCACAAGAAGGACATTGTGTGGCTTTCTAGGT
AG
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