mRNA_Ecto-sp6_S_contig84.17616.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 1533 bits (3968), Expect = 0.000e+0 Identity = 759/801 (94.76%), Postives = 766/801 (95.63%), Query Frame = 1
Query: 1 MARSPVTKIASVAASSAALILSLPSPGEAHPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEGTLSAECAPLYKEVLCGVCSPYSAHLYTRLAEMGDDGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPIFEYCHFDYDSSQEEFDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIPKIGSFAEGNDGELYMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLDGQPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYAQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITSDGAPSEDVAATLVSTASPSTDTETTXXXXXXXXXXATSXAXXXXXXXXSGASSFPETYMGCYGDDKGDRALTFAYTASDTMSFEECESFCSTAGASIFALEYGRQCFCGTDE 2403
MARSPVTKIASVAASSAALILSLPSPGEAHPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEG LSAECAPLYKEVLCGVCSPYSAHLYTRLAEMGDDGLAMTRDFCDGFVMACG DLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEE LPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSY+VAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYH IYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIP GNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKD+GWRMFEGSRCNDGFEGYDGGECSGLDRADYAFP+FEYCH DYDSSQEEFDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGT+LSSIPKIG FAEGNDGELYMVGYQGNIYDLPCGDLCES EEQ+EASSACLPQSDTTPTFEEIGCFLDG+PKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDY QYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAIT DGAPSED AAT VSTAS XXXXXXXXXX X S ASSFP+TYMGCYGDDKGDRALTFAYTASDTMSFEECE FCS AGASIFALEYGRQCFCGTDE
Sbjct: 1 MARSPVTKIASVAASSAALILSLPSPGEAHPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEGALSAECAPLYKEVLCGVCSPYSAHLYTRLAEMGDDGLAMTRDFCDGFVMACGTDLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEDLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSYSVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSSQEEFDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLSSIPKIGGFAEGNDGELYMVGYQGNIYDLPCGDLCESGEEQKEASSACLPQSDTTPTFEEIGCFLDGEPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYVQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGDGAPSEDAAATPVSTASXXXXXXXXXXXXXXXXXXXXXXXAPPTTTMTSEASSFPDTYMGCYGDDKGDRALTFAYTASDTMSFEECECFCSAAGASIFALEYGRQCFCGTDE 801
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 4.130e-155 Identity = 282/683 (41.29%), Postives = 393/683 (57.54%), Query Frame = 1
Query: 85 AHPLCLYGPDRAVSTTAEATFCPDVLA-EGFCCEPNEEAVLSEKYAAIEGT---LSAECAPLYKEVLCGVCSPYSAHLYTRLAEMGD-DGLAMTRDFCDGFVMACGADLAL---DAT-YCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRAD-----FSYEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYD-GGECSGLDRADYAFPIFEYCHFDYDSS-QEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIP-KIGSFAEGNDGELYMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLDGQPKTMTLSTAPGC---DGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYAQYGDQLDDAECDMPCSGFPTQMCGGRSKMNV 2052
AHPLC D+ T+C + +A G CC EE ++ + A G S CA LYK+V+CGVC YSAHLY L + G DGL M +FC+ V C A + D T YCD H +D +WSYP + F E + FPDL + P + ++++ TPDGS WW+ G+ G I S + D+ V+D+S YE+GLL AF P F+E+G FYVSYTV + + NRL++F Y GD T SEE+LLT+ K +S+HS+GW+GF PS Y + + +YWT GDGGPQ DP+N +QD + G+++RI+VPS G GY IP GN GA EICA G RNP RC+FD D LYCGDVG VEE++++ECG ++GW FEGSRC + E + C G+ R+ + FP++EYCH DY S+ +EF D CGDR + G +VIGG+VYRG + D+L G YIF D ++ ++++L GG W+ GTI+S +I SF+E +GE+ ++ Q NIY +PCGDLC ++ CL Q++ PT++ +GCF D A C + M+ +CAS+C T +GAT+FG+++ EC+CG D+ ++G L D+EC+ C P Q CGG + V
Sbjct: 17 AHPLCFID-DKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQVVCGVCHSYSAHLYEYLTDGGMLDGLTMKSEFCEELVDECAAYIEFPTYDGTSYCDHHTGGGNDF-----FWSYPYEEPEIF-EPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSELVIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTV-DLNDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNS--SPQDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSD--GDGYTIPSGNYGGGA---LDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQSTGDDEFTAGNDICGDRVLLGNAVIGGYVYRGNYFSDLLNGAYIFGDSTMKNIYYLVEEDGG-WSLGTIISDASVQIISFSEDINGEIVLLDLQHNIYHMPCGDLC---------ATTCLDQTEDQPTYDSVGCFADEVDDRALPDQADNCGEGETAMSPSICASYCET-QGATYFGVEFSYECFCGSSTADFDKHG-SLPDSECEYLCDANPDQFCGGFGAIEV 672
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 1.980e-151 Identity = 287/680 (42.21%), Postives = 379/680 (55.74%), Query Frame = 1
Query: 88 HPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEGTLSAECAPLYKEVLCGVCSPYSAHLYTRL-AEMGD-DGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRAD-----FSYEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPIFEYCHFDY---DSSQEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILS--SIPKIGSFAEGNDGELYMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLD--GQPKTMTLSTAPGC---DGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYAQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVF 2055
HPLC Y DR FCP+ + G CC EEA++ ++ A+ G L+ +C LYK+V+CGVC YS HLY RL AE+G DG+ M DFC+ ++TPD S +W+ G G IKM D + V+DIS YE+GLLG AFSP F+ G FY+SYTV + + EN NRLSKF Y+AGD T SEE+LLTS K S+HS+GWVGF PS+Y +YH IYWT GDG Q DP+N QD TNL GS++RISVP A GTGYEIP GN A+ PEICA G RNP RC+FD TDELYCGDVG VEE++++ECG ++GW FEGSRC + E DG C DR+ + FPI+EYCH DY D+ + +F D CG R V+G +VIGG+VYRG + D+L G Y+F D++ +++++ G W+ GTI+S S+ IG FAE N+GEL ++ NIY LPCGD+C +S CL QSD PT+E +GCF+D G C + M+ +CAS+C T+ GAT+ G+QY EC+CG + D Y+++G C+M C+G+P++ CGG + V+
Sbjct: 25 HPLC-YVDDRPTDPDEILEFCPEAQS-GACCTDAEEALVQLRHEAV-GNLTGDCDDLYKQVVCGVCGSYSGHLYERLGAELGVLDGMTMKSDFCE--------------------------------------------------------------------ELTPDSSMYWLVGQAGEIKMVDLDDLSTMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVE-LDDGENQRNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIA-SYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVP--ADGTGYEIPTGNL---ASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDG-PCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADVLYGAYVFGDNTSNNIYYIVQD-NGVWSVGTIISDSSVSVIG-FAEDNNGELMVIDQDYNIYQLPCGDMC---------ASTCLDQSDQQPTYESLGCFVDVLGDRALENDDAIRACLVDERVMSPAICASYCYTL-GATYAGVQYGFECFCGVDSD-YSRHGTST---TCNMECTGYPSESCGGVFSIEVY 609
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 2.220e-126 Identity = 225/488 (46.11%), Postives = 289/488 (59.22%), Query Frame = 1
Query: 271 LCGVCSPYSAHLYTRLAEMGDDGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPE---GAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPIFEYCHFDYDSSQE------EFDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSS-IPKIGSFAEGNDGELYMVGYQGNIYDLPCGDLC 1704
+CG C P+S HL+ RL D + +T++FC F C L L A YC H D+ YWSYPL I F+ + AFPDL + ++P EP+ M+MTPDGS WWI G+ G I D T A VLD+S +++E+GLL AFSP+F TG+FY SY V P G NRLS+F Y T SEEIL+TS+EK S+VHS+GW+GF PSSY + GA H ++W +GD GPQ D ++ QD LHGSI+RI V S+ MG+G + G+RNP+RC+FD D+LYCGDVG VE + IECG ++GWR FEG RC E C LDR+ + FP F YCH D+ + CGDR+V G +VI G+VYRGAKYDD+LGG+ IFAD ++ L+HL P GGGW +GTI + AE NDGELY+V YQG I+++PCGDLC
Sbjct: 1 MCGTCHPWSGHLFERL----DTAMTLTQEFCSEFYGECATQLGLPADYCVVHAGPEGDQ-----YWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADATWAKTVLDMSSLVLWTFEEGLLSMAFSPAFHTTGVFYASY----VNGPSFGTNRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEV-SSEMGSGDKE-------------------GMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPSYIVSDQSICGDRSVIGTAVIAGYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSGTIKGDDFFAVSHIAEDNDGELYVVQYQGTIFEMPCGDLC 455
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.220e-116 Identity = 274/796 (34.42%), Postives = 385/796 (48.37%), Query Frame = 1
Query: 88 HPLCLYGPDRAVSTTAEATFCP-DVLAEGFCCEPNEEAVLSEKYAAI--EGT-LSAECAPLYKEVLCGVCSPYSAHLYTRLA-EMGD-DGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAARE---YWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYD-GGECSGLDRADYAFPIFEYCHFDYDSS---QEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIP-KIGSFAEGNDGELYMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSDTTPTFEEIGCFLDGQPKTMTLSTAPGC---DGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYAQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITSDGAPSEDVAATLV----STASPSTDTETTXXXXXXXXXXATSXAXXXXXXXXSGASSFPETYMGCYGDDKGDRALT-FAYTASDTMSFEECESFCSTAGASIFALEYGRQCF 2388
HPLC + DR TFC + A G CC +EE + + ++ + EG L+ +C+ LYKEV+CG C +SAHLY LA E+G DG+ M DFC+ + ACG + TY D + +DY ++ +WSYP + A + + FPDL + P + ++M+ TPDGS WW+ G++G I GLL AF P F + FYVSYTV + + EN NRL++F Y GD VAT +EE+LLT+ K +SVHS+GW+GF PS Y E ICA GLRNP RC+FD D+LYCGDVGQ VEE+N IECG ++GW FEGSRC + + + C G+DR+D+ +P+FEYCH D+DS+ ++EF D CG+R V G VIGG+VYRG + D+L G YIF D ++ +++ L G W GTI+S +I SFAE +GE+ ++ Y +IY +PCGDLC + CL Q++ P +E +GCF D + A C + M+ +CAS+C T+ G+T FG+QY + Y P + CGG S M VF I D P+E A T + +TA +T + TT +T A +G + Y+GC+ D + R T S+TM+ C CS +A +YGR+ +
Sbjct: 20 HPLCFFD-DRPTDYNEVLTFCDTSIAAYGACCTDDEEVQVMKDFSGVTPEGVELTGDCSNLYKEVVCGRCHSFSAHLYENLAPELGLLDGMTMKSDFCNELLTACGGQINF-PTY-DNNTVDYCTKHTGGGDDFFWSYPYE-EAISDPRFLNEVFPDLGDNQQPDDTVSMRQTPDGSQWWLLGISGQIYA-------------------------GLLDLAFGPMFGDDSYPQYFYVSYTVL-LDDGENQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSVHSAGWLGFKPSVYGSAE----------------------------------------------------------------ICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLKEEEDG-WAVGTIVSDASVQIISFAEDVNGEIVLLDYNHDIYHMPCGDLCVTT---------CLDQAEDQPAYESLGCFADDVNDRALPTEADNCGVGETAMSPAICASYCETL-GSTFFGVQYSFQAY---------------------------PDEFCGGFSTMEVFTIE-DPLPTEAPAPTPLMNHSTTAPGATPSPTTTTVGPVLVGPST--APTTPAPLDAGVAG----YLGCFADAEAPRVFPETGMTGSNTMTTATCAGLCSDYA--YYATQYGREVY 674
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI) HSP 1 Score: 361 bits (927), Expect = 1.480e-104 Identity = 202/465 (43.44%), Postives = 254/465 (54.62%), Query Frame = 1
Query: 316 LAEMGDDGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYA-DPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPIFEYCHFDYDSSQEEFDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSS-IPKIGSFAEGNDGELYMVGYQGNIYDLPCGDLC 1704
L E D + +T++FC F C L L A YC+ H D+ YWSYPL I F+ + AFPDL + +P EP+ M+MTPDGS WWI G+ G I DPT A VLD+S +++E+GLL AFSP+F TG+FY SY V P G NRLS+F Y T GSEE+L+ S+EK S+VHS+GW+GF PSSY D GA H ++W +GD GPQ D ++ QD LHGSI+RI V S+ M +GY IP GNPF G G + EICA G+RNP+RC+FD D+LYCGDVG VE + IECG ++GWR FEG RC E C LDR+ + FP F L+HL P GGGW +GTI + AE NDGELY+V YQG I+++PCGDLC
Sbjct: 99 LFERLDTAMTLTQEFCSQFYGECATQLGLPADYCEVHAGPEGDQ-----YWSYPLVIDDSFSTDGLVKAFPDLSDSSIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADPTSAKTVLDMSSLILWTFEEGLLSMAFSPAFHTTGVFYASY----VNGPSFGTNRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYGNDAAGAVHELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGV-SSEMESGYSIPSGNPFSGGGG-RGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFN-----------------------------------------------------RLYHLFPTTGGGWGSGTIKGDDFFAVSHIAEDNDGELYVVQYQGTIFEMPCGDLC 499
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 338 bits (866), Expect = 4.040e-102 Identity = 206/478 (43.10%), Postives = 276/478 (57.74%), Query Frame = 1
Query: 265 EVLCGVCSPYSAHLYTRLAEMGD-DGLAMTRDFCDGFVMACGADLALDA----TYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRAD-----FSYEQGLLGFAFSPSFTET---GLFYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSY--ADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYD-GGECSGLDRADYAFPIFEYCHFDYDS-SQEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIP-KIGSFAE 1632
+V+CGVC YSAHLY L + G DGL M +FC+ V AC A + +YCD H A +WSYP + F E + FPDL + P + ++M + S + D+ V+D+S YE+GLL AF P F+E+ FYVSYTV + + E NRL++F Y GD T SEE+LLTS K +S+HS+GW+GF PS Y A P+ +YWT GDGGPQ D +N AQD ++ G+++RI+VPS G+GY IP GN GA EICA G RNP RC+FD TD+LYCGDVG VEE++++ECG ++GW FEGSRC + E + C G+DR+ + FP++EYCH DY S +EF D CGDR + G +VIGG+VYRG + D+L GHYIF D ++ ++ +L G GW+ GTI+S +I SFAE
Sbjct: 35 QVVCGVCHSYSAHLYEYLTDGGMLDGLTMKNEFCESLVDACAAYIDFPTYDGVSYCDHHT-----GGGADFFWSYPYEEPEIF-EPGLNELFPDLGDGEQPSDTVSM------------------RQVDSDNMDDSSLVIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTV-DLNDGEVQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYGNASPQD----LYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSD--GSGYTIPSGNYGGGA---LDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSSVGDDEFTAGVDICGDRVLLGNAVIGGYVYRGNFFSDLLYGHYIFGDSTMKNIFYLVKE-GDGWSLGTIISDASVQIISFAE 477
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.140e-98 Identity = 213/520 (40.96%), Postives = 284/520 (54.62%), Query Frame = 1
Query: 268 VLCGVCSPYSAHLYTRL-AEMGD-DGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAARE---YWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFSYEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYD-GGECSGLDRADYAFPIFEYCHFDYDSS---QEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIP-KIGSFAEGNDGELYMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSDTTPTFE 1776
V+C C YSAHLY L AE+G DGL MT DFC+ V AC + TY D +DY ++ +WSYP + E S+T F L S WW+ + M +S+ D + +E+GLL F P F+ FYVSYTV + + E NRL++F Y GD VAT +EE+LLT+ K +S+HS+GW+GF PS Y DP N +QD T + G+++RISVPS GTGY IP GN + GA K E+CA GLRNP RC FD D LYCGDVG VEE+N+IECG ++GW FEGSRC + + + C G+DR+ + +P+FEYCH DYDS+ ++EF D CGDR V G VIGG+VYRG + D+L G YIF D ++ +++ L G W GTI+S +I SFAE +GE+ M+ YQ +Y +PCGDLC ++ CL Q++ PT+E
Sbjct: 4 VVCARCHSYSAHLYEYLGAELGMLDGLTMTSDFCEELVTACDGQIEF-PTY-DSGSVDYCTKHTGGGDDFFWSYP------YKERSLTG-FLFL-----------------WSRWWVNSDS----MDSSELVIDVAGPVPSGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVL-LDDGEMQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGS------------------TDPGNHSQDETTMLGAMMRISVPSD--GTGYTIPPGN-YPGA---KAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLREEEAG-WAVGTIISDASVQIVSFAEDVNGEIMMLDYQHRMYHMPCGDLC---------ATTCLEQAEDQPTYE 458
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI) HSP 1 Score: 316 bits (809), Expect = 1.340e-94 Identity = 185/416 (44.47%), Postives = 245/416 (58.89%), Query Frame = 1
Query: 268 VLCGVCSPYSAHLYTRLA-EMGD-DGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAARE---YWSYPLDITAGFNEASVTA-----AFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVL-----DISDRADF--SYEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDFGWRMFEGSRCNDGFEGYD-GGECSGLDRADYAFPIFEYCHFDYDSSQEEFDACGDRTVTG 1452
V+CG C +SAHLY LA E+G DG+ M FCD V AC D +D D +DY ++ +WSYP E +VT FPDL P + ++M+ TPDGS WW+ G++G I A + D D +++ + F +E+GLL AF P F + FYVSYTV + + EN NRL++F Y GD AT SEE+LLT+ + SVH++GW+GF PS+Y +P Y +YWT GDGGPQ DP N +QD T + G+++RISVP A GTGY IP GN +G K EICA GLRNP RC+FD D+LYCGDVGQ EE+N++ECG ++GW FEGSRC + + + C G+DR+ + FP+FEYCH D+DS+ DAC D G
Sbjct: 6 VVCGRCHSFSAHLYEYLAAELGLLDGMTMKSAFCDELVTAC--DGQIDFPTYDSGTVDYCTKHTGGGDDLFWSYPY-------EEAVTCDLYSKLFPDLGANEQPDDTVSMRQTPDGSQWWLLGISGQI-YAVNSDSMDESELVIHVAGPVPSGGSFYVDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVL-LDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYGNP--GYQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVP--ADGTGYTIPPGN----YHGSKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDFDSTDICADACADYAYYG 402
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 281 bits (719), Expect = 7.650e-78 Identity = 273/847 (32.23%), Postives = 376/847 (44.39%), Query Frame = 1
Query: 88 HPLCLYGPDRAVSTTAEATFCPDVLAE-GFCCEPNEEAVLSEKYAAIEGT---LSAECAPLYKEVLCGVCSPYSAHLYTRLAEMGDDGLAMTRDFCDGFVMACGADLALDATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEVLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADFS------YEQGLLGFAFSPSFTETGL---FYVSYTVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHVIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPVGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIEC-----GKDFGWRMFEGSRCNDG------FEGYDGGECSGLDRAD--YAFPIFEYCH---FDYDSSQEEFDACG----DRTVTGLSVIGGHVYRG---------AKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTILSSIPKIGSFAEGNDGEL------YMVGYQGNIYDLPCGDLCESVEEQEEASSACLPQSD-------------------TTPTFEE---------IGCFLDGQPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYAQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITSDGAPSEDVAATLVSTASPSTDTETTXXXXXXXXXXATSXAXXXXXXXXSGASSFPETYMGCYGDDKGDRALTFAYTASDTMSFEECESFCSTAGASIFALEYGRQCFCGTD 2400
HPLC D+ TFC + +A G CC +EEA + + A+ L+ +C LYK+V+C C YSAHLY L GA+L + + A E + FPDL ++ P + ++M+ TPDGS WW+ G++G I S ++ V+D+S +E+GLL AF P F + FYVSYTV + + E NRL+KF Y+ D VAT SEE+LLT+ K +S+HS+GW+GF PS Y +P Y +YWT GDGGPQ DP N +QD T + G+++RISVP A GTGY IP GN + GA K E+CA GLRNP RC FD D+LYCGDVG VEE+N IE ++ GW + G+ +D F GE LD Y P + C D Q +++ G D L + G + G A Y + LG + S G + K GS + N L + G I GD + E + P + T PT +GCF D Q T + + G+M +CAS CA ++G Q+ EC+CG D Y YG+ A CDM C+G + +CGG + M+ ++ S +V T SP D T XXXXXXXXXX X XXXXX + Y+GC+GD + DR + T S +M+ C S C A + + ++G +C+CG +
Sbjct: 19 HPLCFID-DKPTDYDQVLTFCDNSIASSGACCTDDEEAQVVVDFNAVTPVGEELTGDCPDLYKQVVCARCHSYSAHLYEYL----------------------GAELGM---------------------------LDAEIFEPGLNEVFPDLADDQQPGDTVSMRQTPDGSQWWLLGISGQIYAVDSDSMDESELVIDVSGPVPSGGNFYDDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVL-LDDGEMQRNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYGNP--GYSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVP--ADGTGYTIPSGN-YPGA---KAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIENIYFLREEEDGWAV--GTIISDASVQIVSFAEDVNGEIMLLDYQHNMYHMPCGDLCATTCLDQAEDQPTYESLGCYADDVNDRALPIQGPNCGEGETAMSPAICASYCETLGSTFFGVQFSFQCF------------CGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVFTIGDPTPT--EAPAPTPLVNPSTQAPXXXXXXXXXXXXXXXXSTAPTTPAPVNAGAAGYLGCFGDSQ--TDRVFSVVVFSGSMTTAICASTCADY---AYYGTQFGGECWCGNNAD-YDVYGE----ATCDMGCTGDSSDICGGFNAMSFYSTGS-----------VVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPTEPG-----YLGCFGDSQADRVFSVV-TGSGSMTTAICASTC--ADYAYYGTQFGGECWCGNN 761 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17616.1 >prot_Ecto-sp6_S_contig84.17616.1 ID=prot_Ecto-sp6_S_contig84.17616.1|Name=mRNA_Ecto-sp6_S_contig84.17616.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=926bp MARSPVTKIASVAASSAALILSLPSPGEAHPLCLYGPDRAVSTTAEATFCback to top mRNA from alignment at Ecto-sp6_S_contig84:729415..743521- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17616.1 ID=mRNA_Ecto-sp6_S_contig84.17616.1|Name=mRNA_Ecto-sp6_S_contig84.17616.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14107bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:729415..743521- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:729415..743521- >mRNA_Ecto-sp6_S_contig84.17616.1 ID=mRNA_Ecto-sp6_S_contig84.17616.1|Name=mRNA_Ecto-sp6_S_contig84.17616.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2778bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:729415..743521- (Ectocarpus species6 EcLAC_371)back to top |