mRNA_Ecto-sp6_S_contig84.17611.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 355 bits (911), Expect = 6.610e-115 Identity = 180/294 (61.22%), Postives = 215/294 (73.13%), Query Frame = 1
Query: 85 VRDQTGEETYFRVRSTVAMSKIKHTYCSRKGVSTGAMEFLLDGDRVEDDETPASLEIEDDDQIDARLNQRGGKPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQAST-----SEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNLNGSSHD 951
++ TG++ R + + +K +G+ + G + DD T I + L+ R KPVILLYP P+D TV +ELSPLW FS+LYPK L+Q + S+A + GGQQCKWNVHASP GSL+DLSTGR+YPYLFWEADS DGRV+RSFGL+ +RSFCVAG+AAGVFLD +LERLGLN+RERCDMVT WLPQLESS FNVI FV+V+RYE+ ARLTI P PDVTIR+FMAFRG AYDAELDTAKIE+LR+PAR+GFVAVEWGGMNLNG SHD
Sbjct: 162 IKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSHD 453
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI) HSP 1 Score: 176 bits (445), Expect = 2.900e-50 Identity = 84/95 (88.42%), Postives = 87/95 (91.58%), Query Frame = 1
Query: 667 MRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNLNGSSHD 951
MRERCDMVTYWLPQLESS FNVI FV+V+RYEK ARLTI PAPDVTIRIFMAFRGIDAYD ELDTAK+EDLRAP RKGFVAVEWGGMNLN SHD
Sbjct: 1 MRERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLNRVSHD 95
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: D7FN69_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN69_ECTSI) HSP 1 Score: 154 bits (389), Expect = 3.430e-41 Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 415 QQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLE 714
+Q S EAI+ GQ C+W VHA+PDGSL D+ST R+YPYLFWEADS DG V +FGL +T SFCVAG+ AG+FLD +LERLGLN+RERCD++TYWLPQLE
Sbjct: 59 RQTSGYEAIVASGQHCEWIVHANPDGSLTDISTSREYPYLFWEADSTDGLVCGNFGLEKTPSFCVAGNDAGLFLDVALERLGLNVRERCDVITYWLPQLE 158
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A1Y4WJV0_9FIRM (Uncharacterized protein n=1 Tax=Flavonifractor sp. An10 TaxID=1965537 RepID=A0A1Y4WJV0_9FIRM) HSP 1 Score: 150 bits (380), Expect = 2.760e-39 Identity = 89/219 (40.64%), Postives = 119/219 (54.34%), Query Frame = 1
Query: 277 ARLNQRGGKPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNL 933
A +G KPVI LYP + TVTLEL F++ YP E W V A+PDG+L D ++GR Y LFWE G + R F L+ FCVAG+ FL+ +L RLGL RE + + YWLP++E +P+N+I+F Y A LTI P+PD IR+FM ++G++ E+ ++L APAR GF AVEWGG L
Sbjct: 18 AGCGSKGAKPVIYLYPEEETEVTVTLELD--GTFTSTYP----------DYGEG---------WTVTAAPDGTLTDPNSGRTYYCLFWE-----GIIDRQFDLSA--GFCVAGEDTAAFLEDALARLGLTEREANEFIIYWLPRMEGNPYNLISF-QTDAYTDAAELTIDPSPDTLIRVFMTWKGLEQ-PVEIPA---QELTAPARTGFTAVEWGGAEL 203
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A8H7DML9_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7DML9_9AGAR) HSP 1 Score: 147 bits (372), Expect = 6.410e-36 Identity = 102/316 (32.28%), Postives = 150/316 (47.47%), Query Frame = 1
Query: 91 DQTGEETYFRVRSTVAMSKIKHTYCSRKGVSTGAMEFLLDGDRVEDDETPASLEIEDDDQIDARLNQRGGKPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTG-GQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDG--------RVSRSFGLNET-----------RSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGID---------AYDAELDTAKIEDL------RAPARKGFVAVEWGGMNL 933
DQ+ ++++T K H ++ + + + DG R+ D+TPA +++ED D ID L QRGGKPVI +Y D +V L L+ W SA+YP +++A+ +G G++ +WNV +GSL +L+TG YLFWEA + G V+ SF ++ S +A +LD L L L+ R +TYWLP L + FV + YE A L I P P+V RIFM F+GID A A DT + +++ RA F +EWGGM +
Sbjct: 111 DQSSRALVMKMKATTPFRKASHLISTQLVLDD--FDMVYDGCRLRLDQTPADVDMEDQDSIDIILKQRGGKPVIYVYSPTETDVSVALTLTREWSLSAIYP---------VVSTKALPSGTGERIQWNVRTRSNGSLTELNTGLDVAYLFWEAHTNHGIPASPPTSPVAGSFPTTQSFSPLTSDLFPVDSVLIAVRDITPYLDKVLAGLALHTEARTSFITYWLPSLLKHKHVALRFVPQEAYEIAAPLDIQPVPEVVTRIFMLFKGIDDDALTEWENAKAAADDTERWKEVVGGDFERADDASLFRVLEWGGMEV 415
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A8J6M4N2_9FIRM (Uncharacterized protein n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A8J6M4N2_9FIRM) HSP 1 Score: 140 bits (354), Expect = 2.040e-35 Identity = 85/216 (39.35%), Postives = 115/216 (53.24%), Query Frame = 1
Query: 289 QRGGKPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNLN 936
Q KPVI LYP + VTL+ R + YPK TGG W+V A PDG+L D G+ Y YL+WE + R F +R FCVAG + FL+ +L RLGL RE + + +WLPQLE +P+N+I F Y ARLT+ P PD +R+FMA++ +DA E++ + L AP R+GF VEWGG ++
Sbjct: 34 QTSAKPVIYLYPREETNVDVTLDYD--GRLTCTYPK---------------YTGG----WSVTARPDGTLTD-GAGQSYNYLYWEGED---RNEYDF----SRGFCVAGADSAAFLEDALARLGLTRREANEFIVFWLPQLEENPYNLIAF-QTDAYTDHARLTVTPEPDTVLRVFMAWKPLDA-PVEIEA---QPLTAPTREGFTLVEWGGSRVD 215
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A096CD36_FLAPL (Uncharacterized protein n=14 Tax=Eubacteriales TaxID=186802 RepID=A0A096CD36_FLAPL) HSP 1 Score: 140 bits (352), Expect = 3.530e-35 Identity = 82/211 (38.86%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 301 KPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNL 933
KPV+ LYP + TVTL+ ++ YP W V A PDG+L D +TGR+Y LFWE G + + FCVAG+ FL+ +L+RLGL RE + + YWLP+LE +P+N+++F + Y A LTI PAPD IR+F+A++G+DA E++ + L APAR GF AVEWGG +
Sbjct: 32 KPVLYLYPEEETEVTVTLDFD--GTLTSTYPDYGDG-------------------WTVTARPDGTLTDPATGREYYCLFWE-----GITEAEYDFST--GFCVAGEDTAAFLEDALDRLGLTGREADEFIIYWLPKLEGNPYNLLSF-QTEAYTSSAVLTIDPAPDTLIRVFLAWKGLDA-PVEIEP---QTLTAPARTGFTAVEWGGAEV 209
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A8NLI4_COPC7 (Ubiquitin-like domain-containing protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8NLI4_COPC7) HSP 1 Score: 145 bits (365), Expect = 7.700e-35 Identity = 99/324 (30.56%), Postives = 144/324 (44.44%), Query Frame = 1
Query: 91 DQTGEETYFRVRSTVAMSKIKHTYCSRKGVSTGAMEFLLDGDRVE-DDETPASLEIEDDDQIDARLNQRGGKPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSC-------------------DGRVSRSFGLNETR-----SFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAK-----------------IEDLRAPARKGFVAVEWGGMNLN 936
+ TG+ +V+ + + G++ A L G RV+ T A I+ D I RGGKPVI L+ V + +V L L P W FSA+YP P A GQ+ +W V S DGSL++ +TG + YLFWEA++ DG + F N+ S V +LDG+L+ LGL+ R +TYWLP + + + F+ YE+ A L I PAPDV +RIFM F+G+D + E D + ++ +A + F VEWGGM ++
Sbjct: 115 EPTGQRVTVKVKPDSKIGILHDAIEKVLGIARDAQRLLYGGRRVDITSGTFADYGIKSGDTIIVYNVLRGGKPVIYLFSPVEREVSVKLSLVPQWEFSAIYPVVP--------VKTASAGSGQEIEWTVTTSADGSLKERTTGLEVAYLFWEAETTRVAPLSPPPTPTIAATDPGDGPLQEVFVPNDAHLCSENSVVVETSKVTPYLDGALKALGLHTEARTSFITYWLPAILKHEYVALRFLPQSAYERAAPLDITPAPDVVLRIFMLFKGVDQGELEEDWKQAAYRATEPVGRWVQVVGVDVPKATDPQSFRVVEWGGMEIH 430
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A096B0K5_FLAPL (Uncharacterized protein n=19 Tax=Eubacteriales TaxID=186802 RepID=A0A096B0K5_FLAPL) HSP 1 Score: 138 bits (348), Expect = 1.280e-34 Identity = 82/212 (38.68%), Postives = 116/212 (54.72%), Query Frame = 1
Query: 301 KPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNLN 936
KPV+ LYP ++ TVTL+ ++ YP A G W V A PDG+L + +TGR+Y LFWE G + + FCVAG+ FL+ +L+RLGL RE + + YWLP+LE +P+N+++F Y A LTI PAPD IR+F+A++G+DA E++ + L AP R GF AVEWGG ++
Sbjct: 32 KPVLYLYPEEEMEVTVTLDFD--GTLTSTYP--------------AYGDG-----WTVTARPDGTLTNPATGREYYCLFWE-----GITEAEYDFSA--GFCVAGEDTAAFLEDALDRLGLTEREADEFIIYWLPKLEGNPYNLLSF-QTDAYTDSAALTIDPAPDTLIRVFLAWKGLDA-PVEVEP---QTLTAPERTGFTAVEWGGAEVD 210
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Match: A0A7X5D8X7_9CLOT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X5D8X7_9CLOT) HSP 1 Score: 137 bits (345), Expect = 2.070e-34 Identity = 84/212 (39.62%), Postives = 111/212 (52.36%), Query Frame = 1
Query: 301 KPVILLYPSVPLDTTVTLELSPLWRFSALYPKPPSSKLQQASTSEAILTGGQQCKWNVHASPDGSLEDLSTGRKYPYLFWEADSCDGRVSRSFGLNETRSFCVAGDAAGVFLDGSLERLGLNMRERCDMVTYWLPQLESSPFNVINFVDVKRYEKVARLTIAPAPDVTIRIFMAFRGIDAYDAELDTAKIEDLRAPARKGFVAVEWGGMNLN 936
KPVI LYP P V LEL YP + ++ S SE W V A PDG+L DL GR+Y YLFWE G F R FC+AG FL+ +L +LGL +E D +TYWLPQ++ +P+N+I F Y++ ARLT+ P PD IR+FMA+ +D E + + L A R+GF VEWGG ++
Sbjct: 5 KPVIYLYPKEPCVVEVALELE--GTVGMAYP----AFNEERSASEG--------SWKVQADPDGTLSDLRVGREYGYLFWEGV---GDWEPDFD----RGFCIAGADTAEFLEDALRQLGLTDKEADDFITYWLPQMQGNPYNLIAFQG-GAYDRTARLTVDPQPDTIIRVFMAWMRLD----EPVVVEPQVLSAAPREGFAVVEWGGGEVS 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17611.1 >prot_Ecto-sp6_S_contig84.17611.1 ID=prot_Ecto-sp6_S_contig84.17611.1|Name=mRNA_Ecto-sp6_S_contig84.17611.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=305bp MMAKKEEPARVLRIIVRDQTGEETYFRVRSTVAMSKIKHTYCSRKGVSTGback to top mRNA from alignment at Ecto-sp6_S_contig84:668068..672227- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17611.1 ID=mRNA_Ecto-sp6_S_contig84.17611.1|Name=mRNA_Ecto-sp6_S_contig84.17611.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4160bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:668068..672227- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:668068..672227- >mRNA_Ecto-sp6_S_contig84.17611.1 ID=mRNA_Ecto-sp6_S_contig84.17611.1|Name=mRNA_Ecto-sp6_S_contig84.17611.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=915bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:668068..672227- (Ectocarpus species6 EcLAC_371)back to top |