mRNA_Ecto-sp6_S_contig84.17610.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 233 bits (594), Expect = 2.280e-70 Identity = 140/287 (48.78%), Postives = 170/287 (59.23%), Query Frame = 1
Query: 37 KSEVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTTVTLELSPFWSFSALYPKSPSSKLQQAAQDP--------------KVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTSSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
++E++ IKTLTG+ H IRAFPSETVLD+K+K + GI +QQR+I+AG+Q D TLR NI+NG H+ LS RKPVILLYPPAPVD TV +ELSP WSFS+LYPK L+Q A D K ++ P G+ + + R Y + W S D R + D +FC A + FL+ ALERLGLN+RERCDMVT WLP LE S FNVIYFV VER+E+AARLTI P PDVTIRVFMAFR
Sbjct: 155 ENEISFSIKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSVAHL---VLSLRKPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADS----SDGRVTRSFGL--DGSRSFCVAGE--------------------AAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFR 412
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8JUU4_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JUU4_9AGAM) HSP 1 Score: 160 bits (405), Expect = 1.320e-42 Identity = 109/275 (39.64%), Postives = 145/275 (52.73%), Query Frame = 1
Query: 34 GKSEVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPV-DTTVTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTSSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
S +T+F+KTLTG+T + A+ S+T+ IK K + GI DQQRLI AGKQLEDGL L YNIQ+ TLH+ L L G KPVI L+PP P D + L L+ W FS LYP + S+ Q ++ P T + R + W S + + TP + + F F P+ S P +V L VT +++ AL LGL+ RC +TYWLP L+ + + F+ +E AARL I P PDVT RVFM FR
Sbjct: 116 SSSIMTLFVKTLTGKTITVYAYRSDTIDCIKAKIQDREGIPPDQQRLIFAGKQLEDGLMLIDYNIQDNSTLHLVL-RLRGGKPVIYLFPPIPTSDIRIELALTKRWGFSVLYPPAAISRTADDGQSVLWTVDAKPDSTLFDRATGREVSYLFWEAHSNSTELPSPACTRACTPVEDI--FPFDPARP--SLTPADSVVLPLD-KVTE--YIDDALLSLGLHTEARCSFITYWLPDLQRHQYIALRFLPQPDYEAAARLNITPIPDVTTRVFMLFR 382
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: V2XEN0_MONRO (Ubiquitin family protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=V2XEN0_MONRO) HSP 1 Score: 153 bits (386), Expect = 6.420e-40 Identity = 105/275 (38.18%), Postives = 141/275 (51.27%), Query Frame = 1
Query: 49 TIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTTVTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFL---LIDARPSGETPTPHDRL--HTFCFAPSTHPHSTCPVVKLVSRLSWPVTS-SAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
T+FIKTLTG+T + A P ET+ IK K + GI D+QRLI AGKQLEDG TL YNI+ T+H+ L G KPVI L P + V L L P W FSA+YP P ++Q K + T + N T E S + SY L D +P P R+ + CF P+ PV+ + + P+ +L+ AL LGL+ R +TYWLP L + + F+ +E AA L ++P PDVT+R+FM FR
Sbjct: 111 TLFIKTLTGKTIRLEAAPLETIDKIKVKIQDLNGIPPDEQRLIFAGKQLEDGRTLSDYNIEKNSTIHLVLMRRGG-KPVIYLLSPCEQEARVQLSLVPQWEFSAIYPVVP---IEQGCFPSKGQSIEWLVKTHKDGNLT---ELSTGADVSYLFWEALTDPDSLQMSPPPSPRMGQSSECFIPNK------PVLNSANSVVLPIGMIPQYLDKALLALGLHTEARTSFITYWLPSLLKHTYVALRFLPQAVYEPAAPLNVSPPPDVTMRIFMLFR 372
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8MIN4_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MIN4_9AGAM) HSP 1 Score: 150 bits (380), Expect = 1.570e-39 Identity = 97/286 (33.92%), Postives = 140/286 (48.95%), Query Frame = 1
Query: 37 KSEVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTT-VTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTS------------SAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
+S + ++I+T+T + + I P +T+ D+K K E GI DQQRL+ AGK LED TL HY+IQ +H + L G KPV+ L PPAP + V L L+ W FSALYP +P Q + P GT + R + ++G S +LL+ + + PT C + P S V S PV + + +++ L LGL+ RC +TYWLP L+ + F+ +E AA + + P+PDVT RVFM FR
Sbjct: 39 QSTMKVYIRTITSQVYSIDIEPYDTIGDLKSKIEEKDGIPTDQQRLVFAGKMLEDKNTLNHYDIQKECLIHQVV-RLRGGKPVVYLLPPAPTNNIRVDLALTQAWDFSALYPPTPICPTVGGGQSVSWIVDAKPDGTLFEHGTGREVSY-LFGKHSAYLLLIFKSTQRHPTSSTNPALPCSPAVSRPGSPVQEVASTFDPSRPVITPSNSTVLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQQHKHIALRFLPQSEYEAAAPMDVTPSPDVTTRVFMLFR 322
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8J338_9AGAM (Ubiquitin family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J338_9AGAM) HSP 1 Score: 149 bits (375), Expect = 2.390e-39 Identity = 94/270 (34.81%), Postives = 137/270 (50.74%), Query Frame = 1
Query: 52 IFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTT-VTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVT-SSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
+++KTLTG+T + S+T+ ++K K + G +QQRL+ AGKQ+ED TL YNIQ YT+H F+ TL G KPV+ L+PP P + V L L+P WSFSALYP + Q + P GT + R + W + + P+ P + F PS PV+ + P ++ +++ L LGL+ RC +TYWLP L+ + F+ +E AA + + P+PDVT RVFM FR
Sbjct: 3 VYVKTLTGKTITLEVESSDTIANVKAKIQDKEGYPPEQQRLMFAGKQIEDDCTLGDYNIQKEYTIH-FVSTLRGGKPVVYLFPPLPTNRIRVDLALAPAWSFSALYPSASVRPTAGGGQSVAWIVDAKPDGTLSDRGTGREVSYLFW-EAHTNPALPCSPAVSRPGSPVQEVAATFDPSR------PVITPDNSTVIPFDKATGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8MCD0_9AGAM (Ubiquitin family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MCD0_9AGAM) HSP 1 Score: 149 bits (375), Expect = 2.200e-38 Identity = 105/282 (37.23%), Postives = 146/282 (51.77%), Query Frame = 1
Query: 22 VFAPGKSEVTI--FIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPV-DTTVTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVW-GNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTSSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
+ P ++ V + F+KTLTG+T ++++ +T+ ++K K + I DQQRLI AGKQLEDG TL YNI TLH+ L +G KPVI L+P AP D V L L W FSALYP P+ Q + P T +R + W +S+ L + PS D L F P+ +P T P +V L ++ +++ AL LGL+ RC +TYWLP L+ + + F+ +E AARL I P PD+T RVFM FR
Sbjct: 92 IHTPNQNFVILDLFVKTLTGKTISLQSYRHDTIDNLKVKIQDKERIPPDQQRLIWAGKQLEDGRTLNDYNISANATLHLVLEIRAG-KPVIYLFPSAPATDIRVELSLVNHWGFSALYPPVPTCDTVNHGQSVSWIVDAKPDSTLFDHATSREVSYLFWEAHSNPTLPLSPTPSRPGTPLADPLP---FNPA-YPSLT-PADSVVLPLD---KTTGYIDDALLSLGLHTEARCSFITYWLPELQRHQYIALRFLPQPDYEAAARLNITPMPDITTRVFMLFR 364
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A4Y7TAI2_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TAI2_9AGAR) HSP 1 Score: 146 bits (368), Expect = 1.660e-37 Identity = 95/279 (34.05%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 43 EVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPA--PVDTTVTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPST------HPHSTCPVVKLVSRLSWPVTSSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
E+TI++K TG I+A+PS+T+ + K K + GI DQQRLI AGKQLEDG L Y ++N L++ + L G KPVI ++PP+ V+ +V L L P W FS +YP +S + Q + ++ G ++N + W + L + P P+P + + P T H ++T +V VS+++ +L+ AL+ LGL+ R +TYWLP L + + F+ +EKAA L ++PAPDV R+FM F+
Sbjct: 77 EITIWVKRDTGAIVDIKAYPSDTIDNFKAKIQDREGIPADQQRLIFAGKQLEDGRLLSDYGLRNEDVLYLVI-RLRGGKPVIYVFPPSGSEVNASVKLSLVPEWEFSVIYPIVSASITKVGGQTLEWNVKASSDGVLLEKNTGLEVSYLFWEAEALKRLSE--PISPLPSPTSKYASLESVPETFIPNQPHINATNSIVLEVSKMT------PYLDKALKELGLHTEARTSFITYWLPALLKHKYVALRFLPQTVYEKAAPLEVSPAPDVVARIFMLFK 346
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8MJY2_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MJY2_9AGAM) HSP 1 Score: 142 bits (357), Expect = 1.080e-36 Identity = 92/270 (34.07%), Postives = 133/270 (49.26%), Query Frame = 1
Query: 52 IFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTT-VTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTS-SAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
+++KTLTG+ I S+T+ ++K K + G+ DQQRL+ AGKQ+EDG TL YNIQ T+ + + L G KPV+ L+PP P + + L L+P WSFSALYP P Q + P GT R + W + + P+ P + F PS PV+ + P + +++ L LGL+ RC +TYWLP L+ + F+ +E AA + + P+PDVT RVFM FR
Sbjct: 3 LYVKTLTGKKTTIEVESSDTIDNVKAKIQDKDGVPPDQQRLLFAGKQMEDGRTLSDYNIQRESTV-ILVYRLRGGKPVVYLFPPLPTNNVRIDLALTPAWSFSALYPSVPVRPTAGDGQSVAWIVDAKPDGTLSDHGTGREVSYLFW-EAHTNPALPCSPAVSRPGSPVQEVASTFDPSR------PVITPDNSTVLPFDKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: V2WVS7_MONRO (Ubiquitin family protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=V2WVS7_MONRO) HSP 1 Score: 146 bits (369), Expect = 5.870e-36 Identity = 104/278 (37.41%), Postives = 141/278 (50.72%), Query Frame = 1
Query: 40 SEVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTTVTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGE---TPTPHDRLHTF--CFAPSTHPHSTCPVVKLVSRLSWPV-TSSAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
S IF+ T+TG T + S+T+ ++K K E G DQQRLI AGKQLED TL Y+IQ TLH+ + +L G KPVI L P + V L L P W FSA+YP P ++QA K + T + + T E S + SY L +A + E +P P R+ F CF P P++ + + P+ T +L AL LGL+ R +TYWLP L A + F+ +E AA L ++P PDVT R+FM FR
Sbjct: 564 SGTRIFVLTVTGLTLEVPVKFSDTIANVKAKVENLDGTPSDQQRLIFAGKQLEDECTLSEYDIQKNSTLHLVV-SLRGGKPVIYLLSPCEQEARVQLSLVPQWEFSAIYPVVP---IEQACSTSKGQSIEWLVKTRKDGSLT---ELSTGADVSY-LFWEAHTNSEIQMSPPPSPRMEQFSECFIPDQ------PMLNNANSVVLPIETIPQYLNKALLALGLHTEARTSFITYWLPSLLKHAHVALRFLPQAVYEPAAPLNVSPPPDVTTRIFMLFR 827
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Match: A0A8H8MML9_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MML9_9AGAM) HSP 1 Score: 139 bits (350), Expect = 1.150e-35 Identity = 93/270 (34.44%), Postives = 133/270 (49.26%), Query Frame = 1
Query: 52 IFIKTLTGETHIIRAFPSETVLDIKEKSERAGGISVDQQRLIHAGKQLEDGLTLRHYNIQNGYTLHMFLPTLSGRKPVILLYPPAPVDTT-VTLELSPFWSFSALYPKSPSSKLQQAAQDPKVSLLTVPFGTSRKQNQTRFYEFSVWGNSSYFLLIDARPSGETPTPHDRLHTFCFAPSTHPHSTCPVVKLVSRLSWPVTS-SAFLEGALERLGLNMRERCDMVTYWLPLLEPSAFNVIYFVNVERFEKAARLTIAPAPDVTIRVFMAFR 855
+ +KTLTG+T + S+TV ++K K + GI + QRLI AGKQ+EDG TL YNI T+H+ + L G KPV+ L+PP P ++ V L L+P WSFSALYP +P + P GT R + W + + P+ P + F PS PV+ + P + +++ L LGL+ RC +TYWLP L+ + F+ +E AA + + P+PDVT RVFM FR
Sbjct: 3 LIVKTLTGKTIWVEVETSDTVDNVKAKIQDKEGILPEVQRLIFAGKQMEDGRTLSDYNILKQRTIHV-VTRLRGGKPVVYLFPPLPTNSIRVDLALTPAWSFSALYPSAPVRPTAGDGHSVAWIVDAKPDGTLSDHGTGREVSYLFW-EAHTNPALPCSPAVSRPGSPVQEVAATFDPSR------PVITPDNSTVLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17610.1 >prot_Ecto-sp6_S_contig84.17610.1 ID=prot_Ecto-sp6_S_contig84.17610.1|Name=mRNA_Ecto-sp6_S_contig84.17610.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=286bp MVFVLPRVFAPGKSEVTIFIKTLTGETHIIRAFPSETVLDIKEKSERAGGback to top mRNA from alignment at Ecto-sp6_S_contig84:665880..667209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17610.1 ID=mRNA_Ecto-sp6_S_contig84.17610.1|Name=mRNA_Ecto-sp6_S_contig84.17610.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1330bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:665880..667209+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:665880..667209+ >mRNA_Ecto-sp6_S_contig84.17610.1 ID=mRNA_Ecto-sp6_S_contig84.17610.1|Name=mRNA_Ecto-sp6_S_contig84.17610.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:665880..667209+ (Ectocarpus species6 EcLAC_371)back to top |