mRNA_Ecto-sp6_S_contig84.17606.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI) HSP 1 Score: 925 bits (2390), Expect = 0.000e+0 Identity = 453/472 (95.97%), Postives = 462/472 (97.88%), Query Frame = 1
Query: 1 MKPDQVVGGLALLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFPTAILEEQIDRYFYEIVNETDETLDDTHVVFIGANELNRVVEAITRYSTGGQGYQDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLAGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEWCTASVSQSWKRCVRLPVELTDLWAVWPLGGSVWSSFE 1416
MKPDQVVGGL LLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAP+SFQ KEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSAS TDAFRSRERCTGYTGEGEDFPTA LEEQIDRYFYEIVNETDETLD THV+FIG NELNRVVEAITRYSTGG+GY+DPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGL GIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDD+SIFTDLGFTPGEGSLLADSCIQ NFF+DDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVD+PAITKCDDPSNKVFYDG+HFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEWCTASVSQS KR VRLPV+LTDLWAVWPLGGSVWSSFE
Sbjct: 1 MKPDQVVGGLVLLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPNSFQLKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVNETDETLDYTHVIFIGTNELNRVVEAITRYSTGGEGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDESIFTDLGFTPGEGSLLADSCIQVNFFVDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEWCTASVSQSGKRYVRLPVDLTDLWAVWPLGGSVWSSFE 472
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI) HSP 1 Score: 762 bits (1967), Expect = 1.580e-275 Identity = 374/431 (86.77%), Postives = 398/431 (92.34%), Query Frame = 1
Query: 25 GLALLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFPTAILEEQIDRYFYEIVNET----DETLDDTHVVFIGANELNRVVEAITRYSTGGQGYQDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLAGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEW 1305
GL L AASA TRPN+FKKWRFENPPKMVVFGDSN+DTGRR+NAP+SFQF+++GIG FPWKRLYDGPDSDEKT+AYMPFEGSVSNGKAWPTWLRIPDEHNFATSS S TDAFRSRERCTGYTGEGEDFPTA LEEQIDRYFYEIV++ DETLD THV+FIG NELNRVVEAITRYS GG+GY+DPVAF+KVFEV+ATTGFPV D SGLPVPTFAPMIEEVLGAWDEGIGRLI AGVTGRILLANVGSPKGLAGIAGTETA +LD VA LR GA+LLVAKY+ QVRMLD+YTLFAALVDD+S+FTDLGFTPGEGSLLADSCIQFNFF+DDAAEIMGTQALRNPDCQEEC LCADSTTPCATC VD+PAITKCDDPS+KVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEE W
Sbjct: 17 GLVLSSAASAEV----TRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSIGGEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEHW 443
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI) HSP 1 Score: 718 bits (1853), Expect = 3.090e-258 Identity = 349/434 (80.41%), Postives = 385/434 (88.71%), Query Frame = 1
Query: 16 VVGGLALLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFPTAILEEQIDRYFYEIVNET----DETLDDTHVVFIGANELNRVVEAITRYSTGGQGYQDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLAGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEW 1305
VVGGL LL S AS TRPN+FKKWRFENPP+MVV GDSNSDTGRR+N P+SFQF+++GIG FPWKR+YDGPDSDEKT+AYMPFEGSV+NGK WPTWLRIPDEHNFATSSA+ TDAFRSRERCTGYTGEGEDFPTA LEEQIDRYFYEIV++T ++TLD THV+FIG NEL A+TRYS GG+GYQDPVAF+KVFEV+ATTG PV D +GLPVPTF PMIEEVLGAWDEGI RLIGAGVTGRILLANVGS KGL GIAGTETA +LD + LR GA+LLV KY+ QVRMLD+YTLFAALVDD+SIF DLGFTPGEGSLLA++CIQFNF +DDAAEIMGTQALRNPDCQEEC LCADSTTPCATCLVD+PA+TKCDDPS K+FYD IHFTTDFHL+ GEAIRQCSKDSPNFDR FVGV+CPEE+W
Sbjct: 7 VVGGLVLL---SGVASAEVTRPNEFKKWRFENPPQMVVLGDSNSDTGRRFNTPASFQFEDEGIGPFPWKRVYDGPDSDEKTAAYMPFEGSVTNGKVWPTWLRIPDEHNFATSSATATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSIGGEGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGLDGIAGTETATVLDQITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGFTPGEGSLLAETCIQFNFVVDDAAEIMGTQALRNPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLCPEEQW 437
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 3.430e-139 Identity = 217/424 (51.18%), Postives = 280/424 (66.04%), Query Frame = 1
Query: 28 LALLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFPTAILEEQIDRYFYEIVNETD--ETLDDTHVVFIGANELNRVVEAITRYSTGGQGYQDP-VAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLAGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMC 1290
LAL GAA+ G +TRP +KKWR PKMVVFGDS SDTGRRYNAP+S+ F+ GIG +PW +LY+ PDS+ K A++P GS++NGK WP WL +P E NFAT++AS T+ FR+RE C GYTGEGED PT L+EQI RYF N+ D ET D TH+++IG +LN A RYS GG+GY DP V F+ +F+V G T +I E+ +W GI RLI AGVTG ILL N+G+P+GL+ GT ++ S+A +R AQ + ++ QVR+LD YTLF+A+VD IF +LGF EGS L+D C+ +F +D E+ GTQALR CQEEC LCAD+T+PC TC P+ C DP +++F+ +F+T FH I GEAIRQCSKDSPN+DRP V +C
Sbjct: 20 LALQGAAAQEEDGRSTRPLPYKKWRTN--PKMVVFGDSQSDTGRRYNAPASYVFE--GIGVYPWPKLYEAPDSESKFRAFLPGAGSMTNGKMWPEWLNVPQELNFATATASATETFRTRENCEGYTGEGEDLPTGTLDEQITRYF----NDADLHETADYTHIIYIGNEDLNSHSAATARYSIGGEGYVDPYVPFDMLFDVAD---------DGTVTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSSYIGTPLGEIVRSIALTIRAEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSFLSDPCLDLDFAVDYLGEVAGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELC 426
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: A0A6H5KTW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW7_9PHAE) HSP 1 Score: 313 bits (801), Expect = 2.560e-101 Identity = 181/294 (61.56%), Postives = 191/294 (64.97%), Query Frame = 1
Query: 121 MVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSD-----EKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFPTAILEEQIDRYFYEIVNETDETLDDTHVVFIGANELNRVVEAITRYSTGGQGYQDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLA-------------------------------GIAGTETAILLDSVAQALRVGAQLLVAKYSHQV 894
MVVFGDSNSDTG R+N PSSFQFK+DGIGAFPWKRLYDGPD D EKTSAYMPF+ S SNG AWPTWLRIPD A + C F A+ D THV FIGANE+NRV+EAITRYSTGGQ YQDPVAFEKVFEVDATTGFPV S LPVPTFAP+IEEVLGAWDE IGRLIGAG+TGRI LANVGSPKGLA GIAGTET LLDSVAQALR+GAQLLVAKYS QV
Sbjct: 1 MVVFGDSNSDTGSRFNTPSSFQFKDDGIGAFPWKRLYDGPDRDVSDCVEKTSAYMPFDNSASNGIAWPTWLRIPD-----VGGAPLVETLFFVACCKLL------FTLAV--------------------DYTHVAFIGANEMNRVIEAITRYSTGGQSYQDPVAFEKVFEVDATTGFPVLHESSLPVPTFAPIIEEVLGAWDEVIGRLIGAGITGRIHLANVGSPKGLAALSAVAGFVFPARKENEPLILLLLRSRRHAHGIAGTETGFLLDSVAQALRIGAQLLVAKYSPQV 263
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: A0A6H5KNY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY6_9PHAE) HSP 1 Score: 235 bits (599), Expect = 1.740e-72 Identity = 110/126 (87.30%), Postives = 117/126 (92.86%), Query Frame = 1
Query: 925 ALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEE 1302
ALVDD+SI +DLGFTPGEGSLLA SCIQFN F+DDAAEIM TQALRNPDCQEECTLCADST PCATCLVD+PAITKC +PS K+FYDGIHFTTDFHL FGEAIRQCSKDSPNFDR FVGV+CPEEE
Sbjct: 32 ALVDDESIVSDLGFTPGEGSLLAYSCIQFNLFVDDAAEIMRTQALRNPDCQEECTLCADSTAPCATCLVDQPAITKCKEPSTKIFYDGIHFTTDFHLTFGEAIRQCSKDSPNFDRAFVGVICPEEE 157
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Match: D8LHV8_ECTSI (GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV8_ECTSI) HSP 1 Score: 224 bits (570), Expect = 5.570e-64 Identity = 145/422 (34.36%), Postives = 219/422 (51.90%), Query Frame = 1
Query: 118 KMVVFGDSNSDTGRRYNAPSSFQFKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASTTDAFRSRERCTGYTGEGEDFP--TAILEEQIDRYFYEIVNETDE---TLDDTHVVFIGANELNRVVEAITRYSTG---GQGYQDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLAGIA------GTETAILLDSVAQALRVGAQLLVAKYSH----QVRMLDLYTLFAALVDDKSIFTDLGFTPGEGSLLADSCIQFNFFLDDAAEIMGTQA--LR----------NPDCQEECTLCADSTTPCATCLVDRPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCP 1293
K++VFGDSNSD GRR++AP+ + F + IG +PW+++YD D + Y EG+ +NGK W +L IP+ N+AT S + TD FRS++ CTGYT + + T L EQ+ +Y + E + + + TH + IG N+++ V EA+ R + G Y +PV+ + + F M++ V + LI GVTGRIL+ N SP G+ G A D + L ++ S QVR+LDLY+L + V D+ IF + GF + S + C+ +NF +D + +IMG+QA LR N +EC LC D +PC CLVD P ++ CD P +F+DG+H T F+ +F A+ +CSKD + +P+VG +CP
Sbjct: 81 KIIVFGDSNSDAGRRFDAPNVYPFSD--IGVYPWEKVYDA-DGEGMVDVY--HEGTNTNGKVWAQYLNIPNVQNYATGSGTATDTFRSQQLCTGYTTKADKASRRTGTLGEQMTKYLKDFSLEDGKIGCSSEYTHFIGIGMNDVSNVAEAMQRTALAEYLGVTYTEPVSVDDM--------------------NFVTMMQGVTDDIVAAVATLIEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDLKLSALSSAGEDQVRVLDLYSLIDSSVHDRDIFNEEGF---KTSSTPEQCLTYNFHVDSSTDIMGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDELDGSQPWVGKLCP 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17606.1 >prot_Ecto-sp6_S_contig84.17606.1 ID=prot_Ecto-sp6_S_contig84.17606.1|Name=mRNA_Ecto-sp6_S_contig84.17606.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=473bp MKPDQVVGGLALLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDback to top mRNA from alignment at Ecto-sp6_S_contig84:597076..604096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17606.1 ID=mRNA_Ecto-sp6_S_contig84.17606.1|Name=mRNA_Ecto-sp6_S_contig84.17606.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7021bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:597076..604096+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:597076..604096+ >mRNA_Ecto-sp6_S_contig84.17606.1 ID=mRNA_Ecto-sp6_S_contig84.17606.1|Name=mRNA_Ecto-sp6_S_contig84.17606.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1419bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:597076..604096+ (Ectocarpus species6 EcLAC_371)back to top |