mRNA_Ecto-sp6_S_contig84.17568.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE) HSP 1 Score: 907 bits (2343), Expect = 0.000e+0 Identity = 484/525 (92.19%), Postives = 496/525 (94.48%), Query Frame = 2
Query: 11 MRGSVRTLASLLVAGCWLSSVQCFTGIAPHRAIRRASLPTRSNAAFSSRVARRACDDGAKWRGCGGVMMVSKPSAAEAKGATVDPAEVEAALVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVGEDSKASEDDP 1585
MRG R LA LLV CWLSSVQCFTG+ PHR +RRASLPTRSNAAFSS V+ RACDD AK RG GGVMMVS PSAAEAKGA VDPAEVEAALVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITA QAFGAPFAASVSLFGVFALLKYTDISVGIAYQA+L YLTTFLGVATSVSVLPPILRSVLP+NVV PVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSA +AAFVY+NP+VGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAA+ALLTEV NKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAG AGAVGEAGGGRSYFDNSVAAYA+GLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVG+DSKAS+DDP
Sbjct: 1 MRGPARALAPLLVVSCWLSSVQCFTGLGPHRVVRRASLPTRSNAAFSSCVSSRACDDVAKRRGYGGVMMVSTPSAAEAKGAMVDPAEVEAALVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAAQAFGAPFAASVSLFGVFALLKYTDISVGIAYQATL--------YLTTFLGVATSVSVLPPILRSVLPDNVVKVPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSAISAAFVYINPSVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVGKDSKASDDDP 517
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV) HSP 1 Score: 206 bits (525), Expect = 5.320e-56 Identity = 168/423 (39.72%), Postives = 205/423 (48.46%), Query Frame = 2
Query: 287 VEEDKNVYLGLFALQLLPSLLIGY-KLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLF--PSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 1546
V ED Y L +LQLLP LIG ++ S VYF LA++TVY+G ++ I D R +T A AP AS+S+ L Y I G+ A A T GV V PILR+VLPE+ A V P LAKA P L LA L + Y P V +S KFL+ N AW I M S+G IS+ +F AAILL GLFCYDIFWVFGT+VMMTVATK+EAPVKFL+ P +P K YPFSVLGLGD+VIP F M D +AL +V SYF + AAYALGL CF VN ++ +GQPALLYL+PA + SA+ AV NG+LG++ F
Sbjct: 43 VREDAPWYALLASLQLLP--LIGLDRIESVVYFLGLAIATVYVGGRQETIDDPER--VTKKSALSAPIGASISIG-----LLYVLIKAGLDPTALY-------AIAVTLFGVLAVSDVGVPILRNVLPESFAEAEVEVP--EKLAKAIKLA-----PPTLPVDGLATLALGAALSAAYWAP-VAMSQKFLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEP-KPYPFSVLGLGDVVIPGLFVRFMARMD--------------EALQPQVF------------------------------------------------------SYFTAATAAYALGLTACFAVNEITHAGQPALLYLDPACIGSAL--AVGAANGQLGEVWNF 370
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.480e-55 Identity = 151/421 (35.87%), Postives = 203/421 (48.22%), Query Frame = 2
Query: 287 VEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKR-YPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 1546
V+ED YL LFALQ LP +L ++ S +YF +AV+TVY+G ++ I + R ++ A AP AS++L V+ L+K T Y ++ T G + PILR++LP + V P D D P L L L +Y P V + KF++ N+ AW + M S+G IS+ +F A ILLTGLFCYDIFWVFGTEVMMTVATK+EAP+KFL+P+ +R YPFSVLGLGD+VIP F LM D + PK SYF + AAYALGL CF VN ++++GQPALLYLNPA + SA++ V+NG +L +++ F
Sbjct: 90 VKEDALPYLFLFALQFLP-ILGSNRIESIIYFLGVAVTTVYIGGRQETIDEAER--VSEKSALVAPIGASIALGSVYLLIK-TGFDPTSLYAVAV-----------TLFGALAISDIGVPILRNILPPSFSEKEVQVPKDIAQKLEL-------DPPTLPLDGLVTLGLGLLCTAIYWAP-VAMEQKFILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLMTKVD----------------------------------------------QDLKPKVF----------------------SYFSAATAAYALGLSACFVVNEITQAGQPALLYLNPACIGSALVCGVING--QLDEIINF 417
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA) HSP 1 Score: 191 bits (484), Expect = 6.370e-49 Identity = 155/424 (36.56%), Postives = 206/424 (48.58%), Query Frame = 2
Query: 287 VEEDKNVYLGLFALQLLPSLLIGY-KLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLF---PSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 1546
V EDK YL LFALQLLP L+G + + YF AV TVYLG ++ + + R I A AP AS ++ G++AL+K +G+ SL+ A + +G V P+LR+V+P++ V P LA+ + P L L L Y +P V ++ KF++ N+ AW + M S+G IS+ +F AILL GLFCYDIFWVFGT+VMMTVATK+EAPVKFL+ P L + K YPFSVLGLGD+VIP F M D L+ A VG SYF + AAYA+GL CF VN ++ +GQPALLYL+PA + SA+ AV NG+L ++ F
Sbjct: 169 VAEDKYAYLALFALQLLP--LVGLDRWETVSYFLGTAVLTVYLGGRQETVGEVER--IEKENALYAPLGASAAIGGLYALIK-----LGLD-PTSLY------AIGVSLVGAIAISDVGVPLLRNVVPDSFAKGEVEVP--EPLAEKL-----KLNPPTLPVDGLTTLALGIVCTLAYWSP-VAMTQKFMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAE-GKSYPFSVLGLGDVVIPGLFVRFMSKVDEALKPA--------------------------------------------------------------VG------SYFTAATAAYAVGLASCFVVNEITHAGQPALLYLDPACVGSAL--AVGAANGQLSEVWNF 497
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.730e-48 Identity = 121/300 (40.33%), Postives = 156/300 (52.00%), Query Frame = 2
Query: 647 ILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 1546
+L + LPE + V P L A + + D++ + +A L AT A Y+ P L F++ N AWCIGMQ+IGLI+I +F A + L GLF YDI+WVFGT+VM+TVAT+ EAPVKF+FP D + YPF+VLGLGDIVIPA +L+R+ D L AE A +A GT V SYF VAAYA+GL CF N +SKSGQPALLYLNPA++ SA++ A +NG GE +L F
Sbjct: 6 LLAAALPEALRERRVRVP--RWLQDAIADPADQDERGVR-LPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSL-----AERDAGRA-------------------GTKV-------------------------------------SYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNG-GEFRELFDF 240
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.730e-44 Identity = 149/435 (34.25%), Postives = 200/435 (45.98%), Query Frame = 2
Query: 287 VEEDKNVYLGLFALQLLPSLLIGY-KLASFVYFGLLAVSTVYLGSKR--MDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPE-NVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSL-TDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVGEDSKASE 1576
V EDK YL LFALQ LP L+G + S YF LAV+TVYLG ++ +D P++ +T A AP AS+++ G++ LLK + Y + T G + P+LR++ P + A + P +A + + D P+ L + + T VY P V L KFLI N AW +GM S+G AILL GLFCYDIFWVFGT+VMMTVATK+EAPVKFL+ + +D K YPFSVLGLGD+VIP F M D L+ PK + SYF + AY GL CF N + ++GQPALLYL+P+L+ SA+ A +N +L ++ F + K E
Sbjct: 83 VSEDKLGYLFLFALQFLP--LVGSDRYLSIAYFFGLAVTTVYLGGRQEVIDAPEK----VTKQNALYAPVGASLAIGGLYFLLK-NGLDPTSLYAVGV-----------TIFGALCISDIGVPLLRNLFPTVDFGTAEIELP------EAIAKKLDVDRLPIDGLITLGLGLLCTV---VYWTP-VALENKFLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFMAKVDEVLQ----------------------------------------------PKNL----------------------SYFTTATFAYGAGLAACFGANEMFQNGQPALLYLDPSLVGSALACAAVNN--QLSEVWEFEESSEEKVEE 419
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: K0SK77_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SK77_THAOC) HSP 1 Score: 174 bits (440), Expect = 4.730e-44 Identity = 146/434 (33.64%), Postives = 201/434 (46.31%), Query Frame = 2
Query: 251 ATVDPAEVEAA-LVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPE-NVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 1546
A ++ EV A V EDK Y +FALQ +P L G +L S VYF +AV+TVYLG ++ I R ++ A AP AS S+ G++ LLK I + Y A + T G + + P+LR+++P + N V P KA + ++ D+ L L L VY +P V + KF+ N+ AW +GM S L GLF YD FWVFG++VMMTVATK+EAPVKF+FP+ D + Y FSVLGLGD+VIP F LM D L +P+ SYF+ +V AYA GLG CFT N + ++GQPAL+YL+P+L+ SA+ A + NG++ +L F
Sbjct: 47 AKIEAGEVRRANRVSEDKFAYALIFALQFMPLLGNG-RLESLVYFYGVAVTTVYLGGRQETIEQAER--VSKDNALFAPVFASASIGGLYLLLK-NGIDITALY-----------AVVVTLFGAISISDIGVPVLRNLIPGVDFANEEVPLP------KAIVQKFKLDEADALPLDGLITLGLGLLCTAVYWSPLV-MEQKFIASNILAWSLGMASXXXXXXXXXXXXXXXLGGLFFYDAFWVFGSDVMMTVATKVEAPVKFIFPA--DTVRDYNFSVLGLGDLVIPGLFVRLMAKADEAL----------------------------------------------NPENF----------------------SYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACA--SANGQVAQLWDF 386
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S1BCW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCW1_9STRA) HSP 1 Score: 168 bits (425), Expect = 6.780e-42 Identity = 123/306 (40.20%), Postives = 168/306 (54.90%), Query Frame = 2
Query: 245 KGATVDPAE-VEAALVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLP-ENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPS--KRYPFSVLGLGDIVIPATFCTLMRSFDIYLE 1150
+GA +D E + V ED YL L A+Q LP L K A +YF +AV TVY+G ++ I R + A AP ASV+LF ++ LLK+ I I Y + + G P+LR+ +P ++ + +S P + K T E+ + LD LA+ + A +Y +PA+ ++ KFL+ NV AW IGM S+ ++IS+F AILL GLF YDIFWVFGTEVMMTVATKIEAPVKFL+ ++ + YPFSVLGLGDIVIP F ++ D L+
Sbjct: 106 RGAFIDAGEKIRTERVSEDAVPYLILAAVQFLPFLSTD-KYAGAIYFITMAVMTVYVGGRQYAIDGGER--VEKQNALYAPIGASVALFLLYGLLKF-GIDPTIVYSS-----------VAALFGALAVGDQFTPLLRAAVPWDDFADKQISVPKP--VGKFLSSTSESQETLPLD-GVLALGLGIALLA-IYWSPAIAITDKFLVSNVMAWSIGMVSLAAVNISSFQTGAILLGGLFFYDIFWVFGTEVMMTVATKIEAPVKFLYYTVPPDGIPREYPFSVLGLGDIVIPGLFVRMLGKMDKELQ 392
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S1XEF9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEF9_9RHOD) HSP 1 Score: 163 bits (413), Expect = 1.390e-40 Identity = 143/438 (32.65%), Postives = 204/438 (46.58%), Query Frame = 2
Query: 308 YLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIPDETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDD----QPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFP----SLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAAQALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFG-----VGEDSKASEDD 1582
Y L A Q+LP + YF A +TV++G+KR + ++ I+ A AP AS LFG++ LLKY+ I + A +T LG + P++ +++PE ++F W+ DD + F + L+ +TAA A+ + FL+ N+ AW I ++I LI S+F AA LLTGLF YD+FWVFGT+VM+TVA I+AP KFLFP S DPS YP++VLGLGDIV+P+ F +L AL +D + V + SP A+G G YF S AY +GLGL F N ++ QPAL YL P+LL S++LTA + G E+ ++AF G D+ S++D
Sbjct: 24 YAVLLAAQILPFVCRNVA-GDIAYFLTTATATVFIGAKRA-MWEQVAERISQRAAALAPMIASSYLFGLYLLLKYSQIDINTIMAA-----------FSTLLGAICLSESMQPVMHTLIPEPF--------------RSFA-LWKKDDASSQEGFYGFQAASWLLGLSTAAAY----ALHVEPNFLLNNILAWGIAARTISLIQPSSFLVAAGLLTGLFLYDVFWVFGTDVMVTVAMAIDAPAKFLFPRDLSSYADPSSVYPYAVLGLGDIVVPSLFASL--------------------------------ALTIDKRI----------VYQTSPS---------------AIGHVPSG-PYFRASFIAYFVGLGLTFVANTLTSHAQPALFYLVPSLLGSSLLTAAMRG--EMKSIVAFQNDVVTEGNDNGDSDND 369
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Match: A0A7S3Y2U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2U4_HETAK) HSP 1 Score: 163 bits (413), Expect = 1.960e-40 Identity = 114/290 (39.31%), Postives = 158/290 (54.48%), Query Frame = 2
Query: 284 LVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDIP---DETRNPITAGQAFGAPFAASVSLFGVFALLKYTDISVGIAYQASLFFRARERAYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAE-LAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPS--------KRYPFSVLGLGDIVIPATFC 1117
LV ED L L LQ LP +G + A YF +A +TVYLG +R +P D+ + I+ A AP A+S+SLFGV+ L KYTD+ +AY+ Y+ T G L +LR++ P + V P+ VL PE + L A+ L A AAF Y++P L+ + N AW I +QS+GLI+ ++F A + L GLF YD++WV+GT+VM+TVA K++AP+KFL+P DP+ YPFSVLGLGD+VIP FC
Sbjct: 119 LVREDAPGLLALLLLQALPLAALGRE-AGLAYFMAVATATVYLGGRRAVLPSPIDQAKPTISGKSALLAPVASSISLFGVYLLFKYTDLHPEVAYR-----------YVATAFGALNVGLTLGAVLRALGPRALGRRAV--PIPQVLEGPVPEGAPAGYRALATPADCLGAAAGAALAAF-YLSPLPALTT-WEANNFLAWAIAIQSLGLITPASFGTACLFLGGLFLYDVWWVYGTDVMLTVALKVDAPIKFLYPK--DPTLVAQGLAGSDYPFSVLGLGDVVIPGIFC 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17568.1 >prot_Ecto-sp6_S_contig84.17568.1 ID=prot_Ecto-sp6_S_contig84.17568.1|Name=mRNA_Ecto-sp6_S_contig84.17568.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=526bp MRGSVRTLASLLVAGCWLSSVQCFTGIAPHRAIRRASLPTRSNAAFSSRVback to top mRNA from alignment at Ecto-sp6_S_contig84:161529..170466- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17568.1 ID=mRNA_Ecto-sp6_S_contig84.17568.1|Name=mRNA_Ecto-sp6_S_contig84.17568.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8938bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:161529..170466- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:161529..170466- >mRNA_Ecto-sp6_S_contig84.17568.1 ID=mRNA_Ecto-sp6_S_contig84.17568.1|Name=mRNA_Ecto-sp6_S_contig84.17568.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1578bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:161529..170466- (Ectocarpus species6 EcLAC_371)back to top |