mRNA_Ecto-sp6_S_contig84.17555.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: D7FRH8_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH8_ECTSI) HSP 1 Score: 1146 bits (2965), Expect = 0.000e+0 Identity = 607/622 (97.59%), Postives = 616/622 (99.04%), Query Frame = 2
Query: 299 RDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARVVEAKRRSLAQAATVFISGGGDSVTESTGGVRSAIFALAYAIVGVDAMEALFSTLSLLASANDLAKGKMPNERVRAGQGDLEVDVEAVFE 2164
RDVVDALEMAAKD+KVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRK+VYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKK+ ADAENDATAGEKIEL KTSVDESEDN+LSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNA+GAITRFAD GVGPG TEQATSSALCKRLQE+IDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLK WGIQVDSIELSENHLAFSPLQEFSPQQRSLM+KRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARVVEA+RRSL QAATVFISGGGDSVTESTGGVRSAIFALAYAIVGVDAMEALFSTLSLLASANDLAKGKMPNERVRAGQGDLE+DVEAVFE
Sbjct: 4 RDVVDALEMAAKDNKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKDVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKQTADAENDATAGEKIELLKTSVDESEDNVLSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNANGAITRFADPGVGPGSTEQATSSALCKRLQEVIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKAWGIQVDSIELSENHLAFSPLQEFSPQQRSLMEKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARVVEAERRSLVQAATVFISGGGDSVTESTGGVRSAIFALAYAIVGVDAMEALFSTLSLLASANDLAKGKMPNERVRAGQGDLEIDVEAVFE 625
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A372JBQ3_9ACTN (Signal peptide peptidase SppA n=3 Tax=Actinomadura TaxID=1988 RepID=A0A372JBQ3_9ACTN) HSP 1 Score: 294 bits (752), Expect = 9.520e-85 Identity = 213/574 (37.11%), Postives = 297/574 (51.74%), Query Frame = 2
Query: 185 LDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVG---PGLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
L++DL+ + + PPG LS F + R RDV+D L A D++V+ ++ + + GG LA VQEVR+AV R AG ++T+A A+TFGEGG Y+LASAF++V +Q TG VGLTG ++ FF G L+K G++P R EYK+ A + + KAY+P E+ L+ S+ + + +GVA +RG + V + PL A+ AL A L+D + Y D V + +KA AGE +L + +Y R G+ P +G +AL+N HG I R SG G PG + S + + + D + A+V RV+SPGGSAVASD+I V R AGKPVV SMGD+AASGGY +A A DTIVAQP TITGSIGV+ K V LL GI + ++E + FS ++FS + ++ + +IY DF A GR MS + V ++A+GRVWTG A + GLVDELGGL++A +A+K GL DA V
Sbjct: 24 LELDLTDGIVEVPPGDPLSM---------FLSMRRTHLRDVLDGLRRARSDARVKALVVKVT----GGAGLALVQEVREAVGALRAAG-------------------KYTVAWAETFGEGGRGTVPYYLASAFDRVFLQPTGEVGLTGVALEEPFFAGALEKAGVQPRFAKRYEYKTMANTFMEKAYTPEHEESSRRLVESLGEQLVNGVAEARGLTPER-VRELTDKGPLLASEALEAGLVDELGYRDQVYAHLKA-------------KAGEDAQLRYVA------------------RYNRT---------------HGLAKRIPQPGRQEG--------IALINGHGQI-RLGRSGRGGPLPGQSVAMGSDTVGAAFRAAVKDEKVRAIVFRVNSPGGSAVASDAIWREVVLAREAGKPVVVSMGDVAASGGYYVAMAADTIVAQPGTITGSIGVVVGKAVVNGLLDRIGIGLGAVEDGAHARMFSATKDFSDSEWERINASLDQIYADFTRKAAEGRGMSRERVHELARGRVWTGADARESGLVDELGGLDLAFDLARKKAGLAADAPV 509
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: S9PIB5_9DELT (Protease 4 n=3 Tax=Cystobacter TaxID=42 RepID=S9PIB5_9DELT) HSP 1 Score: 293 bits (750), Expect = 3.870e-84 Identity = 209/604 (34.60%), Postives = 302/604 (50.00%), Query Frame = 2
Query: 104 LVGGV------AAASLLYMNRRRRNRLPEGEIWLDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
+VGG+ A L Y+ R +P+ + L++D+S PL + P L+ GE P + RDVVDALE A +D +V+G+L R + G A VQE+RDAV FR G A A ADTFGEG A G Y+LASAF+ V VQ +G V +TG G + F R L K G+KP++ R EYK+A + + Y+ RE T LTS+ + + GV+ +RG ++V A + + PL AL L+DG++Y D+V + VK TAGE ++ R+ + Y+E+ + K P VALV G I+R + + L++ ++D + A++ RVDSPGGS VASD++ V+R R GKPV+ SMG AASGGY IA D IVAQP T+TGSIGV K+ L G+ + + + +N +S EF+P+Q + + + +YEDF AAGR + V+++ +VA+GRVW+G A ++GLVDELGG +A+ +AK+A L + RV
Sbjct: 11 VVGGISLLFVAAIVGLAYLAASHRPGVPDSVV-LELDISEPLREHVPEASLTSAFGEHAP---------TVRDVVDALERAGEDGRVKGLLVRLEGPA---GSTAVVQELRDAVKAFRSRGKKA-------------------WAYADTFGEGTSATGTYYLASAFDAVYVQPSGDVSVTGVGQETPFARDALVKLGVKPQMGKRHEYKAAVNTFTEQTYTEPHREESTRYLTSIFEQMLRGVSEARGLTP-EQVRAALDEAPLTGARALELKLVDGLLYRDEVLAKVKD-------------TAGEGVK--------------------------RLYLEKYLERAGRPHT-----------------KGPV---VALVYGAGTISRGRSESNPMSGEDTLGGETVAAALRKAVEDERVRAILFRVDSPGGSYVASDTVRREVQRAREKGKPVIVSMGTYAASGGYFIAMDADRIVAQPGTLTGSIGVYGGKMVTAELWAKLGVSWEPLGVGKNATMYSSSLEFTPEQHAKNEASLDRVYEDFTAKAAAGRKLPVEKLREVARGRVWSGEDAREKGLVDELGGFPVALRLAKEAAKLEGEVRV 522
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A5Q4DG26_9BACT (Signal peptide peptidase SppA n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A5Q4DG26_9BACT) HSP 1 Score: 293 bits (749), Expect = 1.080e-83 Identity = 220/622 (35.37%), Postives = 314/622 (50.48%), Query Frame = 2
Query: 161 RLPEGEIWLDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRG--VLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGP-GLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDA----RVVEAKRRSLAQAATVFISGGGDSVTESTGGVRSAIFA 2005
RLP G L++DL+R + +T VS +P L F + R + RD+V LE AA D +V G V+G W A QE+ AVTRFR +G T+ A+TFGE PA G YFLA+AF+++++Q +G VGL G + FFRG +++ I P+ +R EYK AAE +SP REA+ ++L S+ D++ G++ RG A++ P A AL A L+D + Y D+ + + A + + + A G+ D S A ++ S + D+A N + +ALV+ GAI R G P G ++A+ + L++ DP A++ RVDSPGGS VASD I V R R G PVV SMG+ AASGGY+I+A D I+A PTT+TGSIGV+A K V L+ G+ VD ++L ++H +S + + SP + + ++V IYEDFV VA GR M V VA+GRVW+GR AL GLVD+LGG ++A+A A++ GL DA R A+R + F G S GG + +FA
Sbjct: 36 RLP-GSFVLELDLTRGVVET--------VSDDPFALAFARG-RPTVRDIVGTLERAAGDDRVEGLRVIGGSGVGGW-----ATTQEIHGAVTRFRASGKP-------------------TLLFAETFGELAPAQGAYFLATAFDEIVLQPSGEVGLAGLALEAPFFRGVFERWDIVPQFESRGEYKDAAEIFENTGFSPPVREALEAVLVSIRDELVGGISGGRGIS-ADSAGALLAAGPFSARQALDAGLVDRLGYRDEARAALDARVRN--GERPDGAAPGDAA-----------DRAASDLAPAD---------------------SVAAVSFGRYADAAGTGWNRGTR-IALVHGSGAIQRGDSPGFDPLGGGTGMGANAVARALRQAASDPDTRAILFRVDSPGGSYVASDIIRREVIRARERGIPVVVSMGNAAASGGYLISADADRIIAHPTTLTGSIGVVAGKFVVDDFLRSLGVSVDKVDLGDDHGFYSAMGDLSPADAAWLSRQVDRIYEDFVDIVAEGRGMDRAAVDAVARGRVWSGRDALAAGLVDDLGGFDVALAHARELAGLEPDADLELRRFPAERTLFEVLMSEFRGGEVRSAAGDAGGPATGMFA 587
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A250IFD6_9DELT (Protease 4 n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IFD6_9DELT) HSP 1 Score: 291 bits (746), Expect = 1.460e-83 Identity = 206/597 (34.51%), Postives = 308/597 (51.59%), Query Frame = 2
Query: 119 AAASLLYMNRRRRNRLPEGEIWLDMDLSRPLSKTPPGVDL-SFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGG--GYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQATSS-ALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
A L ++ + +P G + L++DLS PL++ L S + G+ + + RDVVDALE A DS+V+ ++ + GG G +A VQE+RDAV FR G A +A ADTFGE G Y+LA+AF+ V VQ +G + +TG G + FFR + K+G+KP++ R EYK+A S + Y+ RE + LTS+++ +A GVA RG ++V A + + PL AT AL L+DG++Y D+V + VKA AGE +L + + Y+E+ G N VAL+ GAI+R SG P E + L++ ++D + A++ RVDSPGGS VASD++ V+R R GKPV+ SMG AASGGY ++ D IVAQP T+TGSIGV + KL Q G+ + + + +N ++ +EF+P+Q + + + +YEDF VA GR++ +++V +VAKGR+W+G A +RGLVDELGG +A+ +A++A L + RV
Sbjct: 22 AVVGLAFLGASSKPGVP-GAVVLELDLSEPLAEHVAQESLASALQGD----------KPTVRDVVDALEKAGGDSRVKSLVVKL-----GGSPGSVAVVQELRDAVKAFRAKGKKA-------------------VAYADTFGEDSSGTGAYYLAAAFDAVYVQPSGDLSVTGVGTETPFFRDAMAKFGVKPQMGKRYEYKAAVNSYTEQTYTEPHREELERYLTSVVEQMAAGVAEDRGLS-AEQVRAAIDEAPLLATRALELKLVDGLLYRDEVYAKVKA-------------EAGEGAKL--------------------------LFLEKYLERA--------------------GRPNTQGPVVALIYGTGAISRGKSSGGNPVSGEAGMGGDTVAAALRKAVEDERVKAILFRVDSPGGSYVASDTVRREVKRAREQGKPVIVSMGTYAASGGYFVSMDADKIVAQPGTLTGSIGVYSGKLVTQEAWAKLGVSWEPLGVGKNATMYASSREFTPEQLAKNEAFLDRVYEDFTAKVAEGRHLPLEKVREVAKGRIWSGADAKERGLVDELGGFPVALRLAREAAKLEGEVRV 523
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A8J4CS75_9CHLO (Uncharacterized protein n=4 Tax=Volvox TaxID=3066 RepID=A0A8J4CS75_9CHLO) HSP 1 Score: 296 bits (757), Expect = 2.190e-83 Identity = 212/614 (34.53%), Postives = 321/614 (52.28%), Query Frame = 2
Query: 101 FLVGGVAAASLLYMNRRRRNRLPEGEIWLDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPA-VGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNM-------------LPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARVV 1900
F G +S L + R R + ++ + L PL + + ++ P + + + VV AL AAKD + +GV+ R GG LA VQE+RDA+ FR A + S T T A A +FGE G + + Y LA+A E++ +Q +G VGLTG + F R LD+ KP + AREEYKSAA L + ++ +R +T+LL M + + +RG + + V M PL A +A L+DG Y+D+V+++ + K A EK+ L +D ++ RV + YI M +AS + L + K +++ + VA+V A G I + GP + ++ LC+ L +++DP + AVV+RV+SPGGSA+ASD++ + R+R AGKPVV SMGD+AASGGY +AAA D IVAQP T+TGSIGV+ K+++ + L++ G+ D++ + N A SP +F+ Q + ++ + +Y+DF+ V+ R V E+ ++AKG+V+TG QA D GLVDELGGL A+ AK+ GLPEDA VV
Sbjct: 65 FAGAGALLSSALLVAARYRASQADAQLPSEFVLEVPLDRLRV---VDAINASPLAVLTGDINQVELPQVVSALRNAAKDERCQGVVAYIGPREHLGG-LASVQELRDAILSFRAAATGRSVT---------------TAAFAASFGEAGSSGMVPYVLATACERLYMQPSGMVGLTGLESRSFFARALLDRVHAKPLILAREEYKSAANFLTKSGFTEAQRANVTNLLGDMAGQMVAAMGTARGV-EVEAVRKAMDAAPLLPAAATAAKLLDGTKYKDEVQALFRISDK---------ALGEEKVRLGSKHKRRKDDVRMA-----------RVPLDKYIRLMELKKASAAASKEGLAGWLKGTPFQGLALLLTGKDSESRQRRKVAVVTASGPIVQ-GPVRPGPSQGQVIDATKLCRHLGALLEDPEVTAVVVRVNSPGGSALASDTLHHELMRLRAAGKPVVVSMGDVAASGGYYLAAAADRIVAQPGTLTGSIGVLFGKVNISKTLEEVGVCSDAVTVGRNADALSPFTDFTDAQEAQLEVMIDHVYQDFLDKVSRSRGRPVAEIRQLAKGKVYTGLQAHDVGLVDELGGLETAVQRAKQLAGLPEDAEVV 637
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A8J9RFS0_9CHLO (Protease 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RFS0_9CHLO) HSP 1 Score: 293 bits (749), Expect = 2.560e-83 Identity = 238/658 (36.17%), Postives = 338/658 (51.37%), Query Frame = 2
Query: 83 KVKQRPFLVGGVA-----AASLLYMNRRRRN--RLPEGEIWLDMDLSRPLSKTPPGVDLSFVSGEPQPLY-----FRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVG---EYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKA----------ADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQATSSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLP--EDARVVEAKRRSLAQAATV--FISGGGDSVT 1969
K+ +R + GV AAS + + R+N +LP E LD+DL G+DL + P + FR+ + R V+AL +A+ D +V+GV+ F G LA +QE+R+AVT FRE A+GR T+A AD FGE G +G Y+LASAF+KV +Q +G + ++G F R F D + +KP AREEYK+ + Y+ R A +LL + D+ DG+AASRG ++K+ + D P + AL+ LID Y D+ E G +K+ A A A G E P T+ + A ES I+ +D A+ AK A+ P +AL+ A G+I + ++ S+ +CK+L + DPS+ AVV+R+DSPGGSAVASD+I V R++ AGKPV+ SMG++AASGGY I+A IVAQP+T+TGSIGV+ K ++ L+ +GI +I +N A P +++ +Q L+++ V IY F+ VAAGR MS EV K+AKGRVW G+ AL GLVD LGGL AI +AK GLP EDA V+ R L + + GG S+T
Sbjct: 8 KIARRGLIAVGVVTVASTAASAYAVRQTRKNATKLPP-EFILDIDLE--------GIDLVEQAAPLNPFFQFTGRFRK--QLELRQAVEALRLASTDERVKGVIATFGANQRYQG-LAQIQELRNAVTDFRE-------------RAEGRV---MTVAYADAFGEAG--IGGTLSYYLASAFDKVYMQPSGLLSMSGLASSTPFLRRFFDSWKVKPHFVAREEYKNIINQFTQDNYTKEHRHATGTLLKGFVTDIIDGIAASRGL-NQKQARRAIDDAPFNSDEALAHGLIDDFKYRDEAEGTF--GLEKRTRRIPIAKYLRAQA---AAKGTNQEDPMTAA------FNAMMAPPGES----------IDGTEQDEAAAAAR--------AKRAERDRPV-IALITAVGSIVTGKGAVGELQQMQEIASTPMCKKLIDARLDPSVKAVVIRIDSPGGSAVASDTIYREVMRLKEAGKPVIVSMGNVAASGGYYISAPATKIVAQPSTVTGSIGVVFGKFNIAEALRQYGINPCTIAEGKNADAQFPFSDWTREQERLVNRLVDHIYSGFIRKVAAGRGMSEAEVRKIAKGRVWNGKDALAHGLVDCLGGLQDAIELAKTEAGLPLEEDAVVIRDMARPLPLLVQIVKMLKGGDVSIT 604
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A6H9YF10_9ACTN (Signal peptide peptidase SppA n=1 Tax=Actinomadura rudentiformis TaxID=359158 RepID=A0A6H9YF10_9ACTN) HSP 1 Score: 285 bits (730), Expect = 1.260e-81 Identity = 208/575 (36.17%), Postives = 301/575 (52.35%), Query Frame = 2
Query: 185 LDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNV-ALVNAHGAITRFADSGVGPGLTEQAT---SSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
L++DL+ + +TPP ++ + L R R RDV+D L A DS+VR ++ + + GG LA QE+R+AVT REAG + T+A A+TFGEGG Y+LASAF+KV +Q TG VGLTG ++ FF G L+K ++P+ R EYK+ A + + KAY+P E+ L+ S+ + + G+AA+R + V + PL A AL A L+D + Y D+V + ++ + A M Y+ + + T+ LP + P + V AL++ HG I R SG G L Q T S + L+ + D + A+V RV+SPGGSAVASD+I V R AGKPV+ SMG++AASGGY ++ A DTIVAQP TITGSIGV+ K V LL G+ + ++ E+ FS ++FS + ++ + +IY+DF VA GR +S + V ++A+GRVWTG A + GLVDELGGL++A+ +A+K GGL DA V
Sbjct: 24 LELDLTDGVVETPPADPVAAI------LSMR---RTHLRDVLDGLRRARSDSRVRALVVKIT----GGIGLAMAQELREAVTAVREAG-------------------KLTVAWAETFGEGGRGTVPYYLASAFDKVYLQPTGEVGLTGIALEEPFFAGALEKLRVQPQFAKRHEYKTMANTFMEKAYTPEHEESSQRLVASLGEQITAGIAAARDLPADR-VRELTDRGPLLAAEALEAGLVDRLGYRDEVYAELREQVGENA-------------------------------------------MLRYVARYNR---------THSLP---RRLPQPGKQEVVALISGHGPI-RLGRSGRGGPLPTQGTAMGSDTIGAALRAAVKDDRVKAIVFRVNSPGGSAVASDAIWREVVLARKAGKPVIVSMGNVAASGGYYVSMAADTIVAQPGTITGSIGVVVGKAVVNGLLDRVGVGLGTVAEGEHARMFSSTKDFSESEWERVNASLDQIYDDFTRKVAEGRELSRERVHELARGRVWTGADAKEHGLVDELGGLDLALDLARKKGGLAADAPV 509
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A4R5BI65_9ACTN (Signal peptide peptidase SppA n=5 Tax=Actinomadura TaxID=1988 RepID=A0A4R5BI65_9ACTN) HSP 1 Score: 284 bits (727), Expect = 3.340e-81 Identity = 208/575 (36.17%), Postives = 293/575 (50.96%), Query Frame = 2
Query: 185 LDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNV-ALVNAHGAITRFADSGVGPGLTEQAT---SSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
L++DL+ + +T P +S + + R S RDV+D L A DS+VR ++ + S GG LA QE+R+AV FR+AG + +A A+TFGEGG ++LA+AF+KV +Q TG VGLTG ++ FF G L+K G++P R EYK+ A + + +AY+P E+ L+TS+ + + G+AA+R + V + PL A AL L+D + Y D+V + ++ F GE +L +Y V N A+ P ++V AL+N G I R SG G L S +C + D + A+V RV+SPGGSAVASD+I V R AGKPV+ SMG++AASGGY +A A DTIVAQP TITGSIGV+ K V LL GI + S+ E+ FS ++FS + ++ + IY+ F VA GR +S D V ++A+GRVWTG A +RGLVDELGGL+ A+ +A+K GLP DA V
Sbjct: 24 LELDLTEGIVETAPADPISAIMS---------MRRTSLRDVLDGLRRARTDSRVRALVVKVS----GGVNLALAQELREAVQAFRDAG-------------------KLAVAWAETFGEGGRGTVPFYLATAFDKVYLQPTGEVGLTGVALEEPFFAGALEKAGVQPRFAKRYEYKTMANTFMERAYTPEHEESSQRLVTSIGEQITAGIAAARDLPVER-VRELTDRGPLLADEALEEGLVDHLGYRDEVYAALREEF-------------GEAAQL----------------------RY--------------------VARYNRTQGLARRLPQPGRQDVVALINGQGPI-RLGRSGRGGPLPNSGPAMGSDTVCAAFRAAARDDRVKAIVFRVNSPGGSAVASDAIWREVVLARRAGKPVIVSMGNVAASGGYYVAMAADTIVAQPATITGSIGVVVGKAVVSDLLDRIGIGLGSVADGEHARMFSATKDFSDSEWERINAALDRIYDGFTAKVAEGRELSRDRVHELARGRVWTGADACERGLVDELGGLDTALDLARKRSGLPADAPV 509
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Match: A0A4R4Y0X9_9ACTN (Signal peptide peptidase SppA n=2 Tax=Actinomadura TaxID=1988 RepID=A0A4R4Y0X9_9ACTN) HSP 1 Score: 284 bits (727), Expect = 3.340e-81 Identity = 209/574 (36.41%), Postives = 299/574 (52.09%), Query Frame = 2
Query: 185 LDMDLSRPLSKTPPGVDLSFVSGEPQPLYFRQVCRASQRDVVDALEMAAKDSKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKEVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKKAADAENDATAGEKIELPKTSVDESEDNILSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNAHGAITRFADSGVGPGLTEQAT---SSALCKRLQEIIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKDWGIQVDSIELSENHLAFSPLQEFSPQQRSLMDKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 1897
L++DL+ + + P +S + L R R S RDV+D L A D++VR ++ + S GG LA VQE+R+AV R+AG + T+A A+TFGEGG ++LA+ F+KV +Q TG VGLTG ++ F G L+K G++P R EYK+ A + + KAY+P E+ L+ S+ + + G+AA RG + K V + PL A AL NL+D + Y D+V + ++A F GE+ +L + +Y R G+ + LP + VAL+N HG I R SG G L S + + + D I A+V RV+SPGGSAVASD+I V R AGKPV+ SMG++AASGGY +AAA DTIVAQP T+TGSIGV K V LL GI + S+ + E+ S ++FS + ++ + +IY+DF VA GR +S + V +VA+GRVWTG A +RGLVDELGG+++A+ +A+K GL DA +
Sbjct: 24 LELDLTEGIVEVAPSDPISAI------LSMR---RTSLRDVLDGLRRARSDTRVRALVVKVS----GGIGLALVQELREAVQALRDAG-------------------KHTVAWAETFGEGGHGTVPFYLATVFDKVYLQPTGQVGLTGIAIEEPFLAGALEKAGVQPRFAKRHEYKTMANTFMEKAYTPEHEESSRRLVDSLGEQITAGIAAGRGLPEDK-VRELTDRGPLLADEALEENLVDRLGYRDEVYADLRAEF-------------GEEAQLRYVA------------------RYNRA---------------HGLA--SRLPQPGR------QDAVALINGHGPI-RLGRSGRGGPLPNSGPAMGSDTIGAAFRAAVKDDRIKAIVFRVNSPGGSAVASDAIWREVVLARRAGKPVIVSMGNVAASGGYYVAAAADTIVAQPGTLTGSIGVATGKALVNGLLDRIGIGLGSVAVGEHSRMSSATKDFSDSEWERVNASLDKIYDDFTSRVAEGRGLSRERVHEVARGRVWTGADAKERGLVDELGGIDLALDMARKKSGLAADAPI 509 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17555.1 >prot_Ecto-sp6_S_contig84.17555.1 ID=prot_Ecto-sp6_S_contig84.17555.1|Name=mRNA_Ecto-sp6_S_contig84.17555.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=703bp MTSSMILSKVKQRPFLVGGVAAASLLYMNRRRRNRLPEGEIWLDMDLSRPback to top mRNA from alignment at Ecto-sp6_S_contig84:7308..26513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17555.1 ID=mRNA_Ecto-sp6_S_contig84.17555.1|Name=mRNA_Ecto-sp6_S_contig84.17555.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=19206bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:7308..26513- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:7308..26513- >mRNA_Ecto-sp6_S_contig84.17555.1 ID=mRNA_Ecto-sp6_S_contig84.17555.1|Name=mRNA_Ecto-sp6_S_contig84.17555.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2109bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:7308..26513- (Ectocarpus species6 EcLAC_371)back to top |