mRNA_Ecto-sp6_S_contig83.17551.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: D7G270_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G270_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 2.590e-166 Identity = 245/254 (96.46%), Postives = 246/254 (96.85%), Query Frame = 1
Query: 1 MALRVVVGLLLVVLVTEEISAFVTVPTRTARRGQYPKHAGKHPTTNGLRMMMGKKGGARSKKKRGRGGIGDVGVEDEAVGMDKRGDAAAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTR 762
MALRVVVGLLLVV VTEEISAFVTVPTRTARRGQYP HAGKHPTTNGLRMMMGKKGGARSKKKRGRGGIGDVGVEDEAVGMDKRGDAAAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKV YEEMIFFDDWDQNCKDVGKLGVTCVECRR +S W R
Sbjct: 1 MALRVVVGLLLVVFVTEEISAFVTVPTRTARRGQYPNHAGKHPTTNGLRMMMGKKGGARSKKKRGRGGIGDVGVEDEAVGMDKRGDAAAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVSYEEMIFFDDWDQNCKDVGKLGVTCVECRRVVST-FWRR 253
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A6H5JAJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ8_9PHAE) HSP 1 Score: 470 bits (1209), Expect = 3.480e-164 Identity = 244/268 (91.04%), Postives = 251/268 (93.66%), Query Frame = 1
Query: 1 MALRVVVGLLLVVLVTEEISAFVTVPTRTARRGQYPKHAGK-HPTTNGLRMMMGKKGGARSKKKRGRGGIGDVGVEDEAVGMDKRGDAAAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATKESLR 801
MALRV+VG+LLVV VTEE SAFVTVPTR HAGK HPTTNGLRMMMGKKGGA+SKKKRGRGGI DVGVE+EA+GMDK+G AAAEESDG VPRLVVMDLDYTLWKPELYQMRGAPFTK+KDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGL REVWTRGLAKFAA KESLR
Sbjct: 1 MALRVIVGILLVVFVTEEFSAFVTVPTRIT-------HAGKQHPTTNGLRMMMGKKGGAQSKKKRGRGGIEDVGVENEAIGMDKKGGAAAEESDGIVPRLVVMDLDYTLWKPELYQMRGAPFTKEKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLIREVWTRGLAKFAAAKESLR 261
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A7S2V3W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3W0_9STRA) HSP 1 Score: 177 bits (449), Expect = 9.260e-50 Identity = 83/181 (45.86%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 262 AAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATKESLRP 804
A+ +++ +VP+LVV DLDYT+W PE+YQ+ GAPF +K+ GKV DRSG + LF VR L + F TK+A ASRT + WA +VM L+ ++ L M VF F EIY G+K HF + ++S++ +++M+FFDDW+ NC+DV +LGVT +EC +G++ +V+ L KF A S P
Sbjct: 57 ASMDAETAVPKLVVFDLDYTMWNPEMYQLYGAPF-EKRGGKVYDRSGTEVKLFRDVRSILRRIRTSEEFSSTKIASASRTEYPEWAYEVMSLMPVDDNLTMADVFEFNEIYPGTKTAHFRRLHQDSQIAFKDMVFFDDWNGNCRDVARLGVTTMECPQGMTMKVFDACLQKFQAAVNSKVP 236
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A836CCC3_9STRA (Acid phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC3_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.840e-48 Identity = 86/177 (48.59%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 262 AAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATKE 792
A E VPRLVV DLD T W PE++Q++GAPF + G+V DR G + L P VR L E++ T++A ASRT+ W+RQVM L + GLLM +F F EI G K HF E+ SKVPY+EM+FFDDW++N KDV LGVTC+ C GL++++W +GL K+A+ K+
Sbjct: 122 ALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPF-RVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 297
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A6S9KH66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KH66_HETAK) HSP 1 Score: 167 bits (422), Expect = 1.290e-46 Identity = 78/166 (46.99%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 283 SVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFA 780
+VP+L+V DLD+T+W PE+YQ+ GAPF+ + +GKV DR +DLFP VR L +H F +TK+ ASRT + WA + M LI++ G+ MR F+F EIY G+K +HF +++++S+V YE+M+FFDD NC+DV LGVT C GLS + L FA
Sbjct: 2 AVPKLIVFDLDFTMWDPEMYQLDGAPFSYR-NGKVYDRRNTEVDLFPDVRNILQRIHFSEEFAETKIGSASRTEYPEWAYECMSLIDVCDGMKMREFFTFNEIYPGTKTKHFRKLQKDSQVDYEDMLFFDDCSWNCRDVSALGVTAFNCPNGLSEREFNEALDIFA 166
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A5J4YXB8_PORPP (Magnesium-dependent phosphatase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXB8_PORPP) HSP 1 Score: 157 bits (397), Expect = 7.070e-42 Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 250 RGDAAAEESDGSVPRLVVMDLDYTLWKPELYQM--RGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFA 780
+G AA + +VPRL+V DLD TLW+PE+Y++ GAPF KDG V DRSG + L R LLE+ R++DT++A+ASRT WA + M I + G+ M+S EIY G+KV HF + + +PY++MIF+D+ NC DVG LGV C+ RG++ +W + L +FA
Sbjct: 70 KGAMAAGATRVTVPRLLVFDLDGTLWRPEMYELWGGGAPFKPNKDGNVVDRSGTEVRLLGNSRSLLLELRTDERWKDTQVAVASRTDEPTWAEECMQKIMIADGMNMKSTIDIEEIYKGNKVHHFRALHEKTGIPYDQMIFYDNETANCHDVGTLGVLCIFTPRGMTDGIWQQSLEQFA 248
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A8J7X6_CHLRE (Predicted protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8J7X6_CHLRE) HSP 1 Score: 143 bits (361), Expect = 1.620e-37 Identity = 72/175 (41.14%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 286 VPRLVVMDLDYTLWKPELYQMRG-APFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEP----GLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATKES 795
+P+L+ DLD TLW PE+Y + G APF + K G V D+ E I+L E L E+ +++DT++A SRT + WA + + P G + + ++ EIY GSK+ HF +I ++S VPYE+M+FFD+ NC + +LG+ CV RGL+RE W RGLA FA + S
Sbjct: 4 IPKLIAFDLDGTLWWPEMYMLDGGAPFRRDKSGAVFDKRNERIELMGASEEVLRELATDPKWKDTEIAYVSRTEYPEWAIPCLKTFLVTPEGQGGRNLLDISAYQEIYPGSKITHFKKIHKDSAVPYEDMLFFDNEKWNCTECSRLGIVCVYTPRGLTREAWDRGLADFATAQAS 178
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A7S2PH52_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PH52_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.670e-36 Identity = 68/166 (40.96%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 289 PRLVVMDLDYTLWKPELYQMRGAPFTK-KKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEP-GLLMRSVFSFTE-IYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKF 777
P+LVV DLD+T+W PE+Y++ GAPF K + G+V DR E + +F + E +H F +TK+A+AS T++ WAR+ M L+ ++ + + +V + + IY +K HF E+R S + +++M+FFD+ N ++VG+LGVTCV C G+S E W RGL F
Sbjct: 7 PKLVVFDLDFTVWYPEMYELEGAPFKKCSRTGRVTDRDNEEVQIFDDMHEIFKALHTSDEFENTKVAVASSTTYPEWARECMRLLHVQDIDVALETVIHYRQAIYPRNKKVHFNELREASGIDFKDMLFFDNERYNIREVGELGVTCVYCPDGMSMEHWERGLDAF 172
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: C1MN59_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN59_MICPC) HSP 1 Score: 140 bits (354), Expect = 2.600e-35 Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 286 VPRLVVMDLDYTLWKPELYQMRGAPFTKKKDG-----KVRDRSGEVIDLFPGVREAL--LEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPG-------LLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATK 789
+P LV DLD T+W PELY MRGAP+TK++ +V D SGE + +P A+ L H R TK+A+ASRT+ WA +VMG+ ++ G + V E+YSG+K RHF +++ + +PY +M+FFD+ +QN +DV LGVTCV C G++ W GL FA K
Sbjct: 86 LPALVCFDLDDTIWFPELYMMRGAPWTKERCDTTGRERVMDASGEELRCYPAATAAMAMLRSHAAFAKRGTKIAVASRTNRGAWADEVMGMFVVDDGSGSGTTTTMRECVGDLVEMYSGTKKRHFEKLKARTGIPYADMLFFDNEEQNTRDVATLGVTCVLCVGGMTERAWEDGLRAFAEKK 267
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Match: A0A1W0A7X6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7X6_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.030e-35 Identity = 69/183 (37.70%), Postives = 106/183 (57.92%), Query Frame = 1
Query: 286 VPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIEL------------EPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLSREVWTRGLAKFAATKESL 798
+P+L+V DLD+TLW PE+Y++ GAPF + K G V R GE + LF L E+ FR+T++A+AS T++ WAR+ M LI++ + ++ + + IY +K HF ++ S VPYE+M+FFD+ N +V +LGV C C GLS +VW G+ +F + KE+
Sbjct: 10 IPKLIVFDLDFTLWYPEMYELVGAPFRRNKHGVVSARDGEEVHLFDDAHAVLTEIASLPEFRETQVAVASSTTYPHWARECMSLIQVRNAEMPKKNKKTKEAKVLNAFIDYQAIYPKNKKVHFKQLHEESGVPYEDMLFFDNEHYNIVNVQQLGVVCAYCPDGLSYQVWREGMDRFQS-KEAF 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig83.17551.1 >prot_Ecto-sp6_S_contig83.17551.1 ID=prot_Ecto-sp6_S_contig83.17551.1|Name=mRNA_Ecto-sp6_S_contig83.17551.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=269bp MALRVVVGLLLVVLVTEEISAFVTVPTRTARRGQYPKHAGKHPTTNGLRMback to top mRNA from alignment at Ecto-sp6_S_contig83:650432..656285+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig83.17551.1 ID=mRNA_Ecto-sp6_S_contig83.17551.1|Name=mRNA_Ecto-sp6_S_contig83.17551.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5854bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:650432..656285+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:650432..656285+ >mRNA_Ecto-sp6_S_contig83.17551.1 ID=mRNA_Ecto-sp6_S_contig83.17551.1|Name=mRNA_Ecto-sp6_S_contig83.17551.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=807bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:650432..656285+ (Ectocarpus species6 EcLAC_371)back to top |