mRNA_Ecto-sp6_S_contig83.17541.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig83.17541.1
Unique Name	mRNA_Ecto-sp6_S_contig83.17541.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI)

HSP 1 Score: 818 bits (2113), Expect = 3.600e-291
Identity = 550/669 (82.21%), Postives = 553/669 (82.66%), Query Frame = 1

Query:    1 MASRGGSVVVWLLATFTILTVFMPQELHVAACSEETMTCEADAVCNECMLVGDAFNQEFEDCNAEVNFYCAANLQYSCCQHQVLETDCLANEAFVAYWWSCWMSSCDISYPNAEDCSEFLGVPVTSGDVTYTGGTPAPTVAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAAVPDPIAAGTPGPV------------TAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAFDARTDDDGCTXXXXTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAVGDSTVASSAAASETPAPVALPXXXXXXXXXXXXXXXXXXXSVXXXXXXXXXXXXXXXXXXXXEXXXXXXAXXXXVVADXXXXPFTSAVTXXXXXXXXXXXXTSSARDVGITLSPATELATVGSGPSSEDTTTVTSDIDALYSSTGDCTSCIYDDECSECLSTVGFTDENAAEYSECIQETFTTTVDITDADQCEYMLAVYCCLSSASENDCMAMDEYVELIQCALQVADCSFDEITCSGVIGAGAAGSGAGPAVPHAISYLRAVSTVALGFVAVLVAMV 1971
            MASRGGSVVVWLLATFTILTVFMP ELHVAACSEET TCEADAVCNECMLVGD FN EFEDCNA+ N YCAANLQYSCCQ+Q LETDCLANEAFVAYWWSCWM SCDISYPNAEDCSE LGVPVTSGDVTYTGGTPAPTVAADT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAAVPDPIAAG                  AAPTXXX                            NAFDARTDDDGC     TGE TRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLE FELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAVGDSTVASSAAASETPAPVALP                   SVXXXXXXXXXXXXXXXXXXXX XXXXXX XXXX    XXXX  TSAVT            TSSARDV IT SPATELATVGSGPSSEDTTTVTS IDALYSSTGDCTSCIYD+ECSECLS  GF DENA EYSECIQETFTTTVDITD DQCEYMLAVYCCLSSASENDCMAMDEYVELIQC L  ADCSFDEITCSGVIGAGAAGSGAGPAVP AISYLRAVSTVALGFVAVLVAMV
Sbjct:   25 MASRGGSVVVWLLATFTILTVFMPLELHVAACSEETATCEADAVCNECMLVGDTFNPEFEDCNADGNSYCAANLQYSCCQNQALETDCLANEAFVAYWWSCWMFSCDISYPNAEDCSELLGVPVTSGDVTYTGGTPAPTVAADTLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADAAVPDPIAAGXXXXXXXXXXXXXXXXXAAAPTXXXAVEAGEVTTVTVTT--------------NAFDARTDDDGCAPDGCTGENTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAVGDSTVASSAAASETPAPVALPTPA----------------SVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSAVTPPASTSDPTPAPTSSARDVDITPSPATELATVGSGPSSEDTTTVTSGIDALYSSTGDCTSCIYDEECSECLSADGFNDENAVEYSECIQETFTTTVDITDFDQCEYMLAVYCCLSSASENDCMAMDEYVELIQCVL--ADCSFDEITCSGVIGAGAAGSGAGPAVPLAISYLRAVSTVALGFVAVLVAMV 661

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-13
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 1

Query:  721 FDART-DDDGCTXXXXTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV-GDSTVASSAAASETPAPVALP 1197
            FD R  D +GC     T E TRDGD++D SRWSC+  L        G  C + ++LG    ++ + +A  KG TR RT+++ V+G L    TS GTT G E  +L G +G    ++  ++ S     E++SI E +I V  DS V+  + ++ TPAPV  P
Sbjct:  201 FDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSL--------GGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDS-----EWVSITETDIMVLSDSVVSPPSPSTTTPAPVFAP 348

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 4.310e-13
Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 1

Query:  721 FDART-DDDGCTXXXXTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV-GDSTVASSAAASETPAPVALP 1197
            FD R  D +GC     T E TRDGD++D SRWSC+  L        G  C + ++LG    ++ + +A   G TR RT++++V+G L    TS GTT G E  +L G +G    ++  +++      E+LSI E EI V  D  V   +A+S TPAPV  P
Sbjct:  199 FDPRLGDSNGCDPAGCTAELTRDGDVSDESRWSCAPSL--------GGTCSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNL-----EWLSIKETEIMVLSDGVVFPPSASSPTPAPVFAP 346

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 9.360e-12
Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 1

Query:  745 GCTXXXXTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLE-IFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAVGDSTV 1149
            GC         TRDGD++D SRWSC   L      A+G  C + F L + + +  + +A  KGDTRTRT+++ V+G      TS GTT+G E +  +D G     V+ L      L  DE+LSI+EVEI V D  V
Sbjct:   49 GCPPDGCVAANTRDGDMSDESRWSCRPSLD-----ASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQ----VVEL---VGDLNDDEWLSILEVEIDVDDGIV 172

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.220e-11
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1

Query:  745 GCTXXXXTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            GC     T   TRDGD++++SRWSC+  L        G  C + ++LG    +  + +A  +GDTR RT+ + V+G+L    TS GTTSG E  ++ G  G   V   G E   L+  E+LSI+E EI V
Sbjct:  204 GCDPEGCTAALTRDGDMSEDSRWSCAPEL--------GGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQV-VTITGAE---LSDSEWLSIVETEIMV 321

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 6.720e-10
Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 1

Query:  718 AFDARTDDDGCTXXXXTG---EKTRDGDLTD-NSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            A D R  DDGC      G     TRDG  ++  SRWSC+  LV+  G      CQ+ F   E Q +  + VAF KG+ RTRTL + +NGE+     S    +   +     G  A  V ++ +ES  L +DE++S+IEV I V
Sbjct:  103 AHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEG-----PCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTL-----GVTATDVSTVMLESVALLSDEWISLIEVLIFV 235

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.790e-9
Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 1

Query:  718 AFDARTDDDGCTXXXXTG---EKTRDGDLTD-NSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            A D R  DDGC      G     TRDG  ++  SRWSC+  LV+  G      CQ+ F   E Q +  + VAF KG+ RTRTL + +NGE+     S    +   +     G  A  V ++ +ES  L +DE++S+IEV I V
Sbjct:  354 AHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEG-----PCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTL-----GVTATDVSTVMLESVALLSDEWISLIEVLIFV 486

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 7.930e-9
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 1

Query:  787 GDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTS--GGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            G+    SRWSC+  +V   G     +C++ F     Q +T V VAF KGD RTRTL + +NG+      S  G T +   I E        GV ++ MES G+ AD+++S++EV   V
Sbjct:   13 GEEDTESRWSCAEEIVPDGG-----QCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQE-------NGVHTVAMESVGIDADDWISLLEVRFMV 118

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.690e-8
Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 1

Query:  766 TGEKTRDGDLTD-NSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            T   TRDG  ++  SRWSC+  LV   G      CQ+ F   E Q +  + VAF KG+ RTRTL ++VNGEL     S  T S         G  A    ++ +ES+ L +DE++S+IEV I V
Sbjct:   58 TATNTRDGIFSEIESRWSCATKLVPDEG-----PCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESY-TDSTFNTL----GVTANEASTVMLESTALLSDEWISLIEVLIFV 171

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BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.460e-7
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 1

Query:  766 TGEKTRDGDLTD-NSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 1134
            T   TRDG  ++  SRWSC+  LV+  G      CQ+ F   E Q +  + VAF KG+ RTRTL +++NGE+     S    +   +     G  A  V ++ +ES  L +DE++S+IEV I V
Sbjct:  400 TATNTRDGIFSEIESRWSCATKLVDDEG-----PCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTL-----GVTATDVSTVMLESVALLSDEWISLIEVLIFV 513

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig83.17541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
D7G277_ECTSI	3.600e-291	82.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KL74_9PHAE	1.080e-13	37.27	F5/8 type C domain-containing protein n=3 Tax=Ecto...	[more]
A0A6H5KFA6_9PHAE	4.310e-13	37.89	F5/8 type C domain-containing protein n=2 Tax=Ecto...	[more]
A0A6H5L1V3_9PHAE	9.360e-12	39.71	F5/8 type C domain-containing protein n=2 Tax=Ecto...	[more]
D7FL48_ECTSI	1.220e-11	38.46	Leucine rich repeat carbohydrate binding protein n...	[more]
D7G5F4_ECTSI	6.720e-10	37.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G4F9_ECTSI	4.790e-9	37.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LCQ5_ECTSI	7.930e-9	36.44	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D7FI77_ECTSI	2.690e-8	39.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G3F4_ECTSI	1.460e-7	37.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig83	contig	Ecto-sp6_S_contig83:552807..556308 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	80.5
Seed ortholog evalue	3.3e-12
Seed eggNOG ortholog	2880.D7FL48
Model size	1974
Hectar predicted targeting category	signal peptide
Exons	4
EggNOG free text desc.	regulation of response to stimulus
EggNOG OGs	COG4886@1,KOG0619@2759
Cds size	1974
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350466.8863106-CDS-Ecto-sp6_S_contig83:552806..553233	1682350466.8863106-CDS-Ecto-sp6_S_contig83:552806..553233	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig83 552807..553233 +
1682350466.8986523-CDS-Ecto-sp6_S_contig83:554031..554211	1682350466.8986523-CDS-Ecto-sp6_S_contig83:554031..554211	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig83 554032..554211 +
1682350466.9087086-CDS-Ecto-sp6_S_contig83:554634..555146	1682350466.9087086-CDS-Ecto-sp6_S_contig83:554634..555146	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig83 554635..555146 +
1682350466.9188359-CDS-Ecto-sp6_S_contig83:555453..556308	1682350466.9188359-CDS-Ecto-sp6_S_contig83:555453..556308	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig83 555454..556308 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig83.17541.1	prot_Ecto-sp6_S_contig83.17541.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig83 552807..556308 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig83:552807..556308+
coding sequence from alignment at Ecto-sp6_S_contig83:552807..556308+

protein sequence of mRNA_Ecto-sp6_S_contig83.17541.1

>prot_Ecto-sp6_S_contig83.17541.1 ID=prot_Ecto-sp6_S_contig83.17541.1|Name=mRNA_Ecto-sp6_S_contig83.17541.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=658bp
MASRGGSVVVWLLATFTILTVFMPQELHVAACSEETMTCEADAVCNECML
VGDAFNQEFEDCNAEVNFYCAANLQYSCCQHQVLETDCLANEAFVAYWWS
CWMSSCDISYPNAEDCSEFLGVPVTSGDVTYTGGTPAPTVAADTLTTFST
TTDGTVPATEPPTAFVVTSSMMSDSTVPTTEPPTAADAAVPDPIAAGTPG
PVTAAPTVPAPTATPEAAAPTAPTAVEAGEVTTVTVTTNAFDARTDDDGC
TPDGCTGEKTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQL
VTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLEIFELDGGAGA
PGVLSLGMESSGLTADEFLSIIEVEIAVGDSTVASSAAASETPAPVALPT
PAPVALPTPAPVALPTPASVASETPAPMALPTPGPIIAPTESPVPAPAPT
PLVVADDTPAPFTSAVTPPASTPDPTPAPTSSARDVGITLSPATELATVG
SGPSSEDTTTVTSDIDALYSSTGDCTSCIYDDECSECLSTVGFTDENAAE
YSECIQETFTTTVDITDADQCEYMLAVYCCLSSASENDCMAMDEYVELIQ
CALQVADCSFDEITCSGVIGAGAAGSGAGPAVPHAISYLRAVSTVALGFV
AVLVAMV*

mRNA from alignment at Ecto-sp6_S_contig83:552807..556308+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig83.17541.1 ID=mRNA_Ecto-sp6_S_contig83.17541.1|Name=mRNA_Ecto-sp6_S_contig83.17541.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3502bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:552807..556308+ (Ectocarpus species6 EcLAC_371)
ATGGCGTCCAGGGGCGGCTCTGTTGTCGTGTGGCTCCTCGCCACGTTCAC
CATCCTTACAGTGTTCATGCCACAGGAGCTGCACGTAGCGGCCTGCTCGG
AGGAGACAATGACGTGCGAGGCAGACGCCGTGTGCAACGAGTGCATGCTC
GTGGGCGACGCGTTCAACCAAGAGTTTGAGGACTGCAATGCCGAAGTAAA
CTTCTATTGCGCCGCAAATCTGCAGTATTCTTGCTGCCAGCACCAGGTGT
TGGAGACTGACTGCCTAGCAAACGAGGCGTTCGTGGCGTACTGGTGGTCG
TGTTGGATGAGCTCCTGCGACATCTCGTATCCGAATGCAGAAGACTGCTC
AGAGTTCCTCGGGGTTCCCGTTACTTCCGGCGACGTCACTTACACTGGGG
GTACACCGGCCCCAACCGTCGCGGCCGGTAGGTCCCTTTTCAACTCCACA
TGGATGAACATTTAGCGCCAATTTGGAGGTGTTGTTGGTGACGAATATAC
TTGCGACCACTGAAACATACCTTGCGCACTGCAAGTGCCATGTACATGTA
AGATTTGCCCGGAGCTCGGCAGGCTTCCGTGCCGCGTGTGGTTGCCGGTC
AAAGTTGCGACAACTGGCTCTATAACCCGGGGGCGCGTTCCGCGCAGACA
ATGCGTGGCGAACCAATTCTGAAACCCATGAAAATCGGCAGTTTGAAAAA
TTTTCCGCCTTGCTTGTTCATCTCCACATCTCTCACTCTTCGTGTCATTG
AAATGTCCGGAAGTACCAACGTTTGCTCTTTTGCACTTCGCAGCAGGCCA
AGTGAAACGCTGCTGCTGTAGATAATCTTAGCGCATTCACCCGTCCTGTT
GAATACATGATATCATAGAAGAAGTCTGATTTTTCACTGGCAAGTTGTTG
TTCGCTCGAGCTGGTTCCAACGTGGCATACGTGCGCGATATTATGTGCGG
AATACCAACGTTAGAAACTGCCCACCGAAAAGAAGACACAGCCCCTTCGT
CGGGCACTGCGCATGCATGTGGTCTTGCGTTACCCACGGGAGGTTGACAC
CCAGTCCCGGAGGAACGCCTTGTACATGCTGAGAAGTCATGAAGTCATGT
TATTGCTCACAACGTACCGAAGCCGACGGGATTGATAAACCGAAAAACGA
GCTGCGCACTTTCAATGAAGCAACCCACCCAACAACGTCCGCCTGTTTCT
TGCGGAACCCGTGTATTTTTTCTAGATACCCTGACCACTTTTTCCACGAC
AACAGACGGCACGGTCCCGGCTACTGAACCCCCTACGGCATTTGTGGTCA
CTTCTTCCATGATGTCAGACAGCACCGTCCCGACTACCGAACCCCCTACG
GCAGCTGACGCAGCAGTGCCTGATCCCATCGCGGCGGGAACACCGGGGCC
CGTGAGTAAAATCTTTTCGAACACAGGCAGCGTTCCTGTACCTAGCTTGA
TTATTTGACGTCGACGTAGGTAATTTCGATGCTACAGAAACGTGCTAGCA
AGCAGGAACTTAGCAGTTTAGAACTTGAGCCTCAAAAAAACAATCTAAGA
ACTTGGCCATAAGAACAGGTGCGACGTGGTAGTACTTACAAGAACCCGCC
TTTGTGGTGTACCAATGCGCATACAAATAAAAAAGGAGCCCCGAAAACAC
GGCGACTAGATACACGAACTCAGGGAGGTGGGGGGTGACCCCAGCGGCAG
GGACCGGAGGGTGGGGCACCTCGGGAAAAAAGGTTCGTCACCATATTGAA
CAGCAGTGCGCCGTTACCGTTGCCTCTTGTCTGTTAAGGTCGCAGCGCCT
GTTCCCGCGCCTACGGCGACTCCCGAAGCCGCGGCTCCGACTGTTCCCGC
GCCTACGGCCACTCCCGAAGCCGCGGCTCCGACTGCCCCCACGGCCGTTG
AAGCTGGCGAGGTGACGACCGTCACGGTCACCACCAACGCGTTCGACGCC
AGGACCGACGACGACGGGTGCACCCCGGACGGGTGCACGGGCGAGAAGAC
CCGCGACGGCGACCTGACGGACAACTCCCGTTGGTCCTGCTCCGCGGGCC
TCGTAGAGGCCGCTGGTGGTGCCGCTGGCGAGGAGTGCCAGGTCATGTTC
GAGCTAGGTGAGGCCCAGCTCGTTACGAGCGTGTCGGTGGCGTTCTTGAA
GGGGGACACCAGGACCCGTACGCTCAACATCAACGTGAACGGCGAGCTCT
TCGAAGTGGTGACGTCTGGTGGTACCACGTCCGGACTCGAGATCTTTGAA
CTCGACGGCGGGGCGGGAGCGCCCGGAGTGCTGTCGCTGGGGATGGAGTC
CTCCGGGCTCACCGCCGACGAGTTCCTCAGCATCATCGAGGTATTACTTG
CTTGCATGCAGAGAGCGCGATCAACTGATCCGTGCAACGCTGCAAAGATC
TTCGACATCAGAACCACTGCAGCCCGAACGGCTGCACCTTTCAATGTCAT
CCTCGCAGGTCCATTTCTAGGTGGAAATTGCCGGGCGAATCAGGTCCATG
CAGCGAAGAAACCACCGCGGTGTTTCCATTCCGATACTGCTCTATTCGAG
CAGCCCAACCTCCCACACACGCATCGCTCTGTTGCGAATAAAACGCGGTC
GGAAACTCACCGCCCCAATTTTTGTCCCGCCCTCTGTCTCTGTGCAGGTG
GAAATTGCAGTGGGTGATTCCACGGTGGCCTCTTCTGCAGCGGCCTCAGA
AACGCCTGCCCCTGTGGCCTTGCCAACGCCTGCCCCTGTGGCCTTGCCAA
CGCCTGCCCCTGTGGCCTTGCCAACGCCTGCCTCTGTGGCCTCGGAAACG
CCCGCGCCTATGGCCTTGCCAACGCCTGGCCCCATAATTGCCCCCACCGA
GAGTCCCGTTCCTGCGCCTGCGCCTACCCCTTTGGTTGTCGCCGACGACA
CGCCTGCACCCTTCACTTCTGCTGTCACCCCGCCGGCGTCGACCCCCGAC
CCTACGCCGGCTCCTACCTCGAGCGCCCGGGATGTGGGCATCACCCTGTC
TCCCGCCACTGAGCTCGCGACGGTAGGGAGCGGCCCCAGCTCGGAAGATA
CCACTACAGTAACGAGCGACATTGACGCCTTGTATTCATCGACCGGTGAC
TGCACTTCTTGCATTTACGACGACGAGTGCTCAGAGTGCCTCAGCACCGT
CGGTTTTACCGATGAGAACGCAGCCGAGTACAGCGAGTGCATACAGGAAA
CGTTCACCACAACCGTCGACATCACAGACGCCGACCAGTGCGAGTATATG
CTTGCGGTGTACTGCTGCCTCTCCTCTGCCTCCGAGAACGACTGCATGGC
CATGGATGAGTACGTTGAGCTTATCCAGTGTGCGCTACAAGTAGCGGATT
GCTCATTTGACGAGATCACCTGCTCGGGCGTCATCGGTGCTGGGGCCGCC
GGTAGCGGTGCTGGTCCCGCCGTCCCACACGCCATCAGCTATTTGAGAGC
TGTCTCGACAGTTGCACTCGGGTTTGTTGCCGTTCTTGTCGCGATGGTTT
AA

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:552807..556308+

>mRNA_Ecto-sp6_S_contig83.17541.1 ID=mRNA_Ecto-sp6_S_contig83.17541.1|Name=mRNA_Ecto-sp6_S_contig83.17541.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1974bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:552807..556308+ (Ectocarpus species6 EcLAC_371)
ATGGCGTCCAGGGGCGGCTCTGTTGTCGTGTGGCTCCTCGCCACGTTCAC
CATCCTTACAGTGTTCATGCCACAGGAGCTGCACGTAGCGGCCTGCTCGG
AGGAGACAATGACGTGCGAGGCAGACGCCGTGTGCAACGAGTGCATGCTC
GTGGGCGACGCGTTCAACCAAGAGTTTGAGGACTGCAATGCCGAAGTAAA
CTTCTATTGCGCCGCAAATCTGCAGTATTCTTGCTGCCAGCACCAGGTGT
TGGAGACTGACTGCCTAGCAAACGAGGCGTTCGTGGCGTACTGGTGGTCG
TGTTGGATGAGCTCCTGCGACATCTCGTATCCGAATGCAGAAGACTGCTC
AGAGTTCCTCGGGGTTCCCGTTACTTCCGGCGACGTCACTTACACTGGGG
GTACACCGGCCCCAACCGTCGCGGCCGATACCCTGACCACTTTTTCCACG
ACAACAGACGGCACGGTCCCGGCTACTGAACCCCCTACGGCATTTGTGGT
CACTTCTTCCATGATGTCAGACAGCACCGTCCCGACTACCGAACCCCCTA
CGGCAGCTGACGCAGCAGTGCCTGATCCCATCGCGGCGGGAACACCGGGG
CCCGTGACCGCGGCTCCGACTGTTCCCGCGCCTACGGCCACTCCCGAAGC
CGCGGCTCCGACTGCCCCCACGGCCGTTGAAGCTGGCGAGGTGACGACCG
TCACGGTCACCACCAACGCGTTCGACGCCAGGACCGACGACGACGGGTGC
ACCCCGGACGGGTGCACGGGCGAGAAGACCCGCGACGGCGACCTGACGGA
CAACTCCCGTTGGTCCTGCTCCGCGGGCCTCGTAGAGGCCGCTGGTGGTG
CCGCTGGCGAGGAGTGCCAGGTCATGTTCGAGCTAGGTGAGGCCCAGCTC
GTTACGAGCGTGTCGGTGGCGTTCTTGAAGGGGGACACCAGGACCCGTAC
GCTCAACATCAACGTGAACGGCGAGCTCTTCGAAGTGGTGACGTCTGGTG
GTACCACGTCCGGACTCGAGATCTTTGAACTCGACGGCGGGGCGGGAGCG
CCCGGAGTGCTGTCGCTGGGGATGGAGTCCTCCGGGCTCACCGCCGACGA
GTTCCTCAGCATCATCGAGGTGGAAATTGCAGTGGGTGATTCCACGGTGG
CCTCTTCTGCAGCGGCCTCAGAAACGCCTGCCCCTGTGGCCTTGCCAACG
CCTGCCCCTGTGGCCTTGCCAACGCCTGCCCCTGTGGCCTTGCCAACGCC
TGCCTCTGTGGCCTCGGAAACGCCCGCGCCTATGGCCTTGCCAACGCCTG
GCCCCATAATTGCCCCCACCGAGAGTCCCGTTCCTGCGCCTGCGCCTACC
CCTTTGGTTGTCGCCGACGACACGCCTGCACCCTTCACTTCTGCTGTCAC
CCCGCCGGCGTCGACCCCCGACCCTACGCCGGCTCCTACCTCGAGCGCCC
GGGATGTGGGCATCACCCTGTCTCCCGCCACTGAGCTCGCGACGGTAGGG
AGCGGCCCCAGCTCGGAAGATACCACTACAGTAACGAGCGACATTGACGC
CTTGTATTCATCGACCGGTGACTGCACTTCTTGCATTTACGACGACGAGT
GCTCAGAGTGCCTCAGCACCGTCGGTTTTACCGATGAGAACGCAGCCGAG
TACAGCGAGTGCATACAGGAAACGTTCACCACAACCGTCGACATCACAGA
CGCCGACCAGTGCGAGTATATGCTTGCGGTGTACTGCTGCCTCTCCTCTG
CCTCCGAGAACGACTGCATGGCCATGGATGAGTACGTTGAGCTTATCCAG
TGTGCGCTACAAGTAGCGGATTGCTCATTTGACGAGATCACCTGCTCGGG
CGTCATCGGTGCTGGGGCCGCCGGTAGCGGTGCTGGTCCCGCCGTCCCAC
ACGCCATCAGCTATTTGAGAGCTGTCTCGACAGTTGCACTCGGGTTTGTT
GCCGTTCTTGTCGCGATGGTTTAA