mRNA_Ecto-sp6_S_contig83.17539.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig83.17539.1
Unique NamemRNA_Ecto-sp6_S_contig83.17539.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI)

HSP 1 Score: 514 bits (1324), Expect = 1.300e-180
Identity = 269/272 (98.90%), Postives = 269/272 (98.90%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXASGIERFRRRGGAGRFGASGGLRGDCG 1221
            MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQEL KCSEFFTGVEGQL VRQARVNEGWRQLLLPNV VEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXASGIERFRRRGGAGRFGASGGLRGDCG
Sbjct:    1 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXASGIERFRRRGGAGRFGASGGLRGDCG 272
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 3.890e-89
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 1 
Query:  676 ARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 1107
            ARVNEGWRQLLLPNV VEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVV NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG
Sbjct:   11 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 154
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA)

HSP 1 Score: 239 bits (610), Expect = 2.430e-73
Identity = 133/223 (59.64%), Postives = 158/223 (70.85%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALE---VPS--GKPEVSPAKR-SDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLL-LPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVK-NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTM 1050
            MKFGKN+ RVVELSDPEWSPFW+NYK LKK +K ++    PS  G P   P    S P+A+++SAGEV F++ LRQEL KC EFF   E Q  VR+ARV EGWRQL  +P V V+G   KRLMAACV+LYKDLLLLENFAIMNY  FSKILKKHDKLTGF TRE +MKNVV     F  YP+V++ML  VE LF+ I++  + +  +       EEQLFID M
Sbjct:    1 MKFGKNLERVVELSDPEWSPFWLNYKHLKKMLKEVQHTPAPSAAGAPIAKPPNGLSSPEALSKSAGEVAFFKFLRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHANIAHSS-------EEQLFIDAM 216
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.070e-58
Identity = 110/248 (44.35%), Postives = 155/248 (62.50%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKAL-----------EVPSGKPEVSPAKRSDP--QAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG 1107
            MKFGK + +VV LSDPEW+PFW++YK LKK+VK L           +  S   +  P+  ++P  + +A+SAGEV F+R LR E+ K SEF+ G+E Q+  R+ R+  G + L  P   +E +   ++  AC+ LYKDLLLLENFA+MNYC  SK LKKHDK     TR  FM+NVV   PF  YP++++ML  +E +FK I++L    A      PL EE+ LF++ +  +N EA  +Q+ E AD+G
Sbjct:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSVNQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 6.560e-57
Identity = 110/248 (44.35%), Postives = 155/248 (62.50%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKAL-----------EVPSGKPEVSPAKRSDP--QAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG 1107
            MKFGK + +VV LSDPEW+PFW++YK LKK+VK L           +  S   +  P+  ++P  + +A+SAGEV F+R LR E+ K SEF+ G+E Q+  R+ R+  G + L  P   +E +   ++  AC+ LYKDLLLLENFA+MNYC  SK LKKHDK     TR  FM+NVV   PF  YP++++ML  +E +FK I++L    A      PL EE+ LF++ +  +N EA  +Q+ E AD+G
Sbjct:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.440e-48
Identity = 117/292 (40.07%), Postives = 159/292 (54.45%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQ-AMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPN----------------------------VAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIES--------LPS----ASAEAGTR---------------VPLREE-QLFIDTMLTINTEAFRLQQAEGADIGE 1110
            MKF KN+  VV+LS PEW+PFW++YK LKK++K +   + +   SP KR   + A+A  A E++F+  L  EL K  EF+ G E +  +R +RV EG RQLL P                             VA E    +R ++ACV++YKDLLLLE +AIM+YC FSKILKKHDK+TG+ TR  +M  VV   PF +Y  V+KML   E+LFK + +        LPS     + +AG R               +PL EE QLFID +  +N EA  L + E  ++ E
Sbjct:    1 MKFCKNLLEVVDLSHPEWAPFWMDYKTLKKRLKDMSA-AKRSGASPKKRGRREVAIAEDALEIQFFSHLMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEVEE 291
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.330e-45
Identity = 94/242 (38.84%), Postives = 148/242 (61.16%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEV------------PSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVV-KNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLR-EEQLFIDTMLTINTEAFRLQQA 1089
            MKF K + +VV  SDPEW+P ++NYK+LKK++ A+++             +G    S    +  +++  S GE +F++ L  EL K SEFF   E Q+ +R AR+ EG RQL         N ++ +MAAC+KLYKDLL+LEN+AI+N+CGFSKILKKHDK TGF TR+ FM N V ++    +Y  + +++   E LF  I  +    +   T++ L+ +E++ I+++L +  +A R +++
Sbjct:    1 MKFAKTLQQVVSTSDPEWAPLFMNYKYLKKRINAIKIMNNTYSNSLPQADAGIENSSSPHETSKRSITESIGERDFFKALHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKI----SHTNTKLSLQTDERISIESILNLKFQAIRFKKS 238
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BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A7S2SN02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN02_9STRA)

HSP 1 Score: 169 bits (429), Expect = 5.990e-45
Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 1 
Query:  400 INMKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEV------PSGKPEVSPAKRS-----------------DPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESL-PSASAEAGTRV-PLREEQLFIDTMLTINTE 1068
            + MKFGK + RV  +SDPEW+PFW+NYK+LKKK+  +E       P       P+  S                 DP  +  SAGE+ F++ ++ EL K + FF   E +L  R  RV EG RQ+   N  V  +   RLM ACV LYKDL++LEN+A+M +  FSKILKKHDK T + TR  FM   V + PFV+Y ++  ML  V  LF+ ++ L P A A  G     LRE +     ML +  +
Sbjct:   18 VRMKFGKKLLRVQSMSDPEWAPFWVNYKYLKKKINEIETLRSVAQPEAHNSAVPSSASISVNAADAAANVRTEPLDPDTIKESAGEIAFFKAVQTELVKSATFFVSAEQELHERWKRVCEGMRQIGDRNYTVLDDATPRLMRACVSLYKDLIMLENYAVMTHSAFSKILKKHDKRTRYATRVKFMSRRVNHQPFVRYIQLKTMLDRVADLFRQVQKLIPDADAAYGDSTGSLREIKELHREMLVVGAD 265
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A7S1XNX0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNX0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.600e-45
Identity = 108/287 (37.63%), Postives = 150/287 (52.26%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRSDPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQL-------------LLPNVA-VEGNP--------------NKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKN----IESLPSASAEAGTRVPL----------------------REEQLFIDTMLTINTEAFRLQQAEGADI 1104
            MKFGKN+  VV +S+PEW+PFWI+YK LKK++K +   +   +   A++    A+A  A E+ F+R L  EL    +F+   E +  +R  RV+ G RQ+               P  A VEG                 +R + +C+++YKDLLLLEN+A+M+YCGFSKILKKHDK+TG+RTR  +M+ VV   PF +Y  V KML   E LF+     +E  P    +AGT  P                        EE LFID +  IN EA  L + E A++
Sbjct:    1 MKFGKNLLEVVAMSNPEWAPFWIDYKMLKKRLKDMAPDAAAGKQQGAQQQPRGAIASDAKEIAFFRHLMAELNHTVDFYKSAEAEFRIRIWRVHAGLRQITEAGSPRATSPVPFAPGAATVEGGDAEGQAPPCEWQCAMKRRALTSCLRIYKDLLLLENYAVMSYCGFSKILKKHDKVTGYRTRAQYMRRVVNPKPFCKYQGVAKMLHECEDLFRRLAAPVEPGPGGG-DAGTAAPNGGSEGLPISDWSDDRRKKFALHEEEHLFIDAIRNINKEASTLARDERAEV 286
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Match: A0A8J2SU39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU39_9STRA)

HSP 1 Score: 167 bits (423), Expect = 7.810e-45
Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 1 
Query:  406 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEV-PSGKPEVSPAKRSDPQ--AMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVA--VEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNI 972
            MKFG ++ RVV +SD EW+P+++ YK LKK +K ++  PS  P     +R D +   MA+SA EV F+R LR EL K ++FF   E  LEVR+ RV E  RQL   +    +E  P+ R + ACV  Y+DLLLLEN+AIMNYCGFSKILKKHDK TGF TR  FM+  V   PF +YP++++M+   E L+++I
Sbjct:    1 MKFGHDMHRVVRVSDAEWAPYFMQYKLLKKCIKQIKADPSSPPVAECCERGDCEKATMAKSAPEVAFFRALRFELQKSAQFFRQAELVLEVRRERVREALRQLQDEDRLGLLEDAPD-RALRACVTYYRDLLLLENYAIMNYCGFSKILKKHDKQTGFTTRTQFMRVCVAPQPFTRYPRLMEMIREAEDLYRDI 193
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G279_ECTSI1.300e-18098.90SPX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5H8_9PHAE3.890e-8998.61SPX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z5J1_9STRA2.430e-7359.64SPX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D3X8_9STRA4.070e-5844.35SPX domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TGL0_9STRA6.560e-5744.35SPX domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7R9YCT0_9STRA2.440e-4840.07Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2D364_9STRA2.330e-4538.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SN02_9STRA5.990e-4540.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XNX0_9STRA7.600e-4537.63Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SU39_9STRA7.810e-4549.48Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:510526..519002 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score518.1
Seed ortholog evalue2.9e-144
Seed eggNOG ortholog2880.D7G279
Model size1338
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.cellular response to phosphate starvation
EggNOG OGsCOG5036@1,KOG1161@2759
Ec32 ortholog descriptionSPX, N-terminal
Ec32 orthologEc-16_002150.1
Cds size933
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17539.1prot_Ecto-sp6_S_contig83.17539.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig83 510526..518597 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350466.6311557-CDS-Ecto-sp6_S_contig83:510525..5106051682350466.6311557-CDS-Ecto-sp6_S_contig83:510525..510605Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 510526..510605 -
1682350466.6436088-CDS-Ecto-sp6_S_contig83:511164..5113161682350466.6436088-CDS-Ecto-sp6_S_contig83:511164..511316Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 511165..511316 -
1682350466.653979-CDS-Ecto-sp6_S_contig83:512137..5122261682350466.653979-CDS-Ecto-sp6_S_contig83:512137..512226Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 512138..512226 -
1682350466.6646678-CDS-Ecto-sp6_S_contig83:512757..5129141682350466.6646678-CDS-Ecto-sp6_S_contig83:512757..512914Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 512758..512914 -
1682350466.67497-CDS-Ecto-sp6_S_contig83:513374..5135741682350466.67497-CDS-Ecto-sp6_S_contig83:513374..513574Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 513375..513574 -
1682350466.6879787-CDS-Ecto-sp6_S_contig83:514424..5144801682350466.6879787-CDS-Ecto-sp6_S_contig83:514424..514480Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 514425..514480 -
1682350466.6987603-CDS-Ecto-sp6_S_contig83:514930..5150301682350466.6987603-CDS-Ecto-sp6_S_contig83:514930..515030Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 514931..515030 -
1682350466.710108-CDS-Ecto-sp6_S_contig83:518498..5185971682350466.710108-CDS-Ecto-sp6_S_contig83:518498..518597Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 518499..518597 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350466.7263062-UTR-Ecto-sp6_S_contig83:518597..5190021682350466.7263062-UTR-Ecto-sp6_S_contig83:518597..519002Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 518598..519002 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig83.17539.1

>prot_Ecto-sp6_S_contig83.17539.1 ID=prot_Ecto-sp6_S_contig83.17539.1|Name=mRNA_Ecto-sp6_S_contig83.17539.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=311bp
MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKALEVPSGKPEVSPAKRS
DPQAMARSAGEVEFYRLLRQELCKCSEFFTGVEGQLEVRQARVNEGWRQL
LLPNVAVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKL
TGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAG
TRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGGGGGGASGIE
RFRRRGGAGRFGASGGLRGDCGGGGGGGGGTKRRGEYAVDTGGAAARRHR
ATYKSKPRPL*
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mRNA from alignment at Ecto-sp6_S_contig83:510526..519002-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig83.17539.1 ID=mRNA_Ecto-sp6_S_contig83.17539.1|Name=mRNA_Ecto-sp6_S_contig83.17539.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8477bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:510526..519002- (Ectocarpus species6 EcLAC_371)
CACAGCTCCCCCTGCAGCGGCTTGCTCAGCTCGGTTCCGCTCCCTCTCTC
CGACAACATACAACACGTTCGCGTTCGCTCACACGATCGCGTCCTGTGTG
ATTCAACCATCGTGTCAACTGCACGGTAGAGAGTCCCCGCAGAAAAACAT
CGTCAACAGCAGCAGAGCGGCTTATCAGCAGCAGCACTCAGCAGGCAGTC
ACAAAGTAAGGTGCCGAGCAGCGCCCTTGGAGGAGGAGCCATCGGAGTGC
TGCTACAACAAGCGAGGCATTATAGGAGGAGCGTGCTCTTGGAGCGGTGT
ACGTGACGACAGGAACTGTATAGTAGTAGCATCACGGCAGAAACTGCAAG
TTGCCACACCCACAGCAGTCTCCCGTCTCAAGGTTTCAAACAAACCATAA
TAAACATGAAGTTTGGCAAAAACATCGGGAGGGTTGTGGAGCTATCGGAC
CCGGAGTGGTCGCCATTCTGGATCAACTACAAGTTCCTCAAGAAGAAGGT
CAAGGTGCGTGCGTGCCCCTTAGAGTTGACACACAGCGAGAACATACATG
GAGCAGAGCGTTTCTGCAGCAGCTGCTTGCTGTGTGGTTTTTAGGTGCGC
TTCGTGAAATGACGGAAATTGAAGATTTTGCCATCAGCAAGCCTCTATTC
AGTATGTTCGCGTTATGTCTATCCAGTCCATAACCGAATCTCTTGTCTCC
TGACTTGCCTTCACCTCCTCCGTTTTCCATCCTGGAAAGCCAAGCTGGCG
GCAACTTCCACTTCCAAAGCGCTCGTAACTCTATCGTGTTGTACATGCCA
ACGGGTCATGTGTAAAAAGATGGAATACTTTGCGCCGAGATATGCAGATT
CATACATGTAAAGCGTCGTGCCTGCCTGTGGGAAGGGCCGAGGACACCGC
AAGGCTCTGCTGCCGTACGTTACCATGATAACAACACATGAAGCTGTCCT
TTTGAGGACGTGGAGGTGGATCACACACTTGGGAGCTTTGGGGGCGATCA
TGTGTGCACAGCAGTTGCTGTCAGACGATGAACACGATGCCCCCCGCACA
TGATCACGAAAGGGATTGGATCCATTCTGAGATGGAATATCAGCGCTTGA
GAGATTCGCAAGATTGATTCATTCTGAACATGTCATCGGACATTACAGGG
GTTGCAGCCCCACCCGCCCTGGGTTATTACAGAGCACCGCCGACGACTTA
CTTTTTTTTTTTTTTCTCCCATCATTGGATTCTGTCGTCTGCCCCTCTGG
CCCCTATCCTCCACTTCTACCTAGCTAGACGACCCAACCGGGGTGACATA
GGAGGGGGGGGTTGGACCCCCTCCTGCGGTTCCTGCCTGAGATTTTTTAT
CGCGAGAAGGGTACAGCAATCCCTTCCCTCGCGACTTATGAAGTCGATCG
AATTTACTAACAGCGCGTTTCGCAGCGCGTTGCTTTCAACTTACTACTGT
ACGACGCCAACCTTCGTTTCTGACCCTGCGAGGCGGTGGATTGTGGATTT
GACAGCGTACAGCAGCTGCAGCAGCGTCGGCTTGTGCCGCCTGCCCTACC
AACATCGCGCACGCCCCGTTTCAAGAATACAGTACTGTACGCACAGCAGT
GTGGATAGGGCGTGAGCTCGATAGGCGCTCTCTGTCTTTTATTGTAGGCG
TTTCAAACAAAAAACAGGCGCCGCATACAATTGCACTTTCGAAAACGCTT
GTTGGGCGACATGCAGGCGAATTGGAAAAAAATAGGCGAACCCCGGAGAA
GCATCTTATGCGAAATTTACAGTGTGTTTGTCTGCTTGTAGTGTATGAAT
AAGGGCAACATCAGTCGCACCGCTGTTACAACGCGAGCCCATGATACCAT
TAGGCAGGAAAGGCTGGGCGGCGGCGGGACTGTGTGGGGCTCCGTGGTAC
TTTGTAAGGATGTGCCAAAAAAATGGCAAGAGCAGGCGCCAGCCGGGGAA
AGTAGGTGCAGGCGCGCCAGGTTAGGCGCAGGCTCTCCGAGTTTAGGCGC
AGGCACCCCGAGAACAGGCACAGCGGCCGGCTTTAAGGCGAGTTTTAGTT
GGCTCGAATATCGTGTCTTTTTTGCGCAAATCTCTTACAAATTTCGCGTC
TTTGGCGAGCGCCTATCGAGCACAAGCCTAGGTTCGGAAGAGAGAGATGG
GGGGATCGCCCTCCCGCGCGTCCCCCCTTCCCCCCGCAGCAACAGTTCAC
TTGCAGCACCCGTGCATGATGTGCTCACCCAAAATCATGCCATACTATTC
ATAGATACGTTTGCCAACAGCAGTTGGCGAGCGTCGGTGAGGACCTTCAC
CCTCTTTACACGTCCTATGCACAAGACCTATTAAAGACCCAAATCGGGTA
CAACCATTGTCCTTCGAAGAACAAGAGGCGGCACTGTTGCTGTGTGCCTT
ACCTAGTCCGTAGCGCTACATAGAAAGTGGAGGTTTTTAGCATACGTCAC
AAAGGCTGTTGAGGCGAACATGCGGCAGTCAAGGTCGCCAAACACCGGTA
TTATGTCTTGCCGTGGTATGGGAGGTGTTTCGTGCATGATCAACCGCCAC
AGCCCTACGGGTCTTGGCACTGCTTGGGTGTCGTTTTTTTTGTGTTCCGA
TACTAAATATTACCAGGTACGTTCGAAGTATTAGATTGTGTTCCGTTGGC
GTATGTGTACGTGACGAGGAGACAGCTGGATATTTTTTAGACAGCACAGG
CGAGGAGGGGCATGTTTTGGCGTACTACATGCCAACACGCGCGCACGGAA
CCTGCGCATCTGGGGGGGGGTCAATTCCCACCAATTTCCTCAATGCTTGC
AAAGTACGGGGTTGAGCGTTGATTTTTCGAAGCTCTCCAAACAGAGTTGA
TCTTTGAACTCTATTTTCATGTGATTTGATACTTTTTCGGAGAGAGGCCT
CCTCCAAGTATATCATTCATGCCCATTCGGACCGCGCACTTTGGCCATGC
GCTGATCGAGCTGGTAGAGCACTGCGAGTCCGATGCTAGAACCACGTGTT
GTCATTGGTCAGCCGGCAGGCATGGTCATCGCTAATGAAGCCCACGCGAA
CAGTCGTAGGCCCTCTATTAGGCGGGTTATATACGACGGGTAAAATTGGC
TGGCACAGACGGAATAATCAAGGTGTTTTATGCATACGCATTGAATACGA
CTAATGAAGAGAGCAACGCGGTGCGGGACGTGCTGTCTCTCTCTCTCTCT
AAACTCTGTGCATTGGGTGCGTGGTGTGTGGTGGGCAGAGGACACGGTTT
TATCTTTCTTTCATAACTTGTGGTGGGTGTCACGTGTGTGCTCGGTGCCC
GTCGCCCCATTCACAGATAAAGACGTGATCTTGTGGCCCGCTGCCTGATT
CAACCTAAATTAGCGATCGCCACTCCAAGGGTCGGGCTTGCATGAAGGAC
GGTGGCCACGAAGTGCACGCCGAAAAGGATGGGGATGTGTGTTTTTCGCT
CCAAGTTTCCCAGCCCTGGGCTGAAACGTGGAGGGGTGTCTGCCCCCCCA
AGTCCTGCTTTGTCGTCGTTTCTATACTCGAATTGTCTGGAACATTTCCA
GAACCGGTCTTCATAATAATACTGCACGTGACCGTTGAGCGTATCCCTTA
TAAACAGGCAGTAGGATAATACAGTGACATTACTTGTACCTCTCGCGGCT
CGGTGAAGCCACCCTCTCCCGAGTAGATAGGCGCTCCGTGTGGACGGTGG
CCATGAAGTGCCAGTCGACGGAGGGTACCGTAGTTGAAACACATGAGAAC
TCCTTCCATTCTCGCGTTGTCCCTATCCTCCACCTCCTGCGCCCCCCCTG
TCAGTGGGACACGTAGATGTTTTATTTGAAATTGTTCGTGTTTTTTTCCC
GGTACAGGACTGGCTGACGCCTTGTCTTTTCCTTGGTCGGCCGGTTAGCG
CCGTCGATGCTAATTGATAAAGGACGCAAATTCACTCCGTCCGCCTCTGA
TGTTATTTGTTGGTACTGGAAGGCTCTGGAGGTGCCGTCGGGAAAGCCGG
AAGTATCGCCGGCCAAGCGTAGTGACCCACAGGCGATGGCGAGATCGGCG
GGAGAGGTGGAGTTCTACCGATGTGAGTCGACTACTGGGCCGCGTCGTGC
AGTACATCCGTTGATTGCAGCTGATGCTGTTTGTAGGGGGGGCGCCTTTC
CTCTTGGTTACTATTGCCAGGCGAAACGGATGGCATGTGTGCCAGCGAAA
GGATCGACCCTTACGTACCAGATCAGCCTGTGAGGACCGGTTTTTGGTTG
TCTTGCCAGCCAGCCGTATGTATGCTTGATATAAATCGTCGATTTTTGTA
TGACTGTTGTCGCCACAAAGGAGCTGCTACGCGTGCTGCCGCTGCTGGCT
CTGTTTGGACTCGTGGTCTCGCACCCTGCATTCTGACCTCTCTCCTTTTG
CTTCCCTTTCCATGTCCTACCCTGCTCCACAATCCAACCCTGCTGGCCCG
TTCCTGACCCGTTGTTTCTGTTTTTTATGTATTTGTTTCGTGTTGCCAAC
TGGGTCGGTATCATCCCACTAGTGCTTCGGCAAGAGCTGTGCAAGTGCTC
CGAGTTTTTCACCGGCGTGGAGGGCCAGGTGTGTGCGCGTGCGTGCTTTT
TTTTGTTGTACACTACTTTTTCATGTGCGTGTTCTTGATTGGCGTAGACC
GCGCTAACCGGCTGACCAAGTAAAAGACGACAGTGGCAGTGCGGTTGAAA
CTACGTGCTTCTGAAGGACACAATCTGTGTGTGTGCGTGTGCGTGTGCGT
GCGCGCCTTTTTTTCTTTTTCTGTGCACTATTGTATCATGTGTGTGTGTT
ATTCTTTAGCATCGACCACGCTAACCGACTGACCCACGAGAAGACGTACG
TATCGTAGCGGGCTATGAGCTTGTTTGTTTTTTAGTGTGTGTGTACTCTT
TTTGTATCTGTGGTGTGACGGAGAGAGAGCGTTGACTCGTGGGGCGGCTG
GAGCAGCGCAAGCTTGGTTTCTTTAGCACTATAATAGCAGCTGAACTCCA
CCACCACCACCACCCGGGTGGGTTTTGAACTTGTTCGTGTCCAGGACGGG
CTTTTAGTTGATCGGACCTCTAGCGAGGCGCTAGCGATGGTCGCTGCTGC
TGTCCGTGCCAACACGGGTTTGAGACTTGGGAACGCTTGTGCGCCGTCTC
TGTGCGAGTTGGCGTTGCTGGGCTCTGCACCATATCAGCGTCGCCCTGCC
GTCCAATCTCTCCGCGCTCGCACGTACCCCTGATAGTACTCGACCCCTTT
CGGCGTTTCTCCCGATATTTTTGTCGTCGTTGCTGCACTCGTTCGCCCGC
CCTATTCCCTCGCCGCTCTCTGCTTGGCCCTCCTGTCCGCGTTCGTGTGC
GAACGTCAAACGCCTGTTGTGTTGTTTGCTCGACTACAACGTCAACAACA
AACGACGACACCAATTTTTTACTTTCAGCTGGAGGTGAGACAGGCCAGGG
TGAACGAGGGGTGGCGGCAGCTCCTCCTGCCCAACGTGGCGGTGGAGGGC
AACCCGAACAAGAGGCTCATGGCGGCGTGCGTGAAGCTGTACAAGGACCT
GCTGCTGCTGGAGAACTTCGCCATCATGAACTACTGCGGGTTCAGCAAGA
TCCTCAAGAAGCACGACAAGCTCACGGGGTGCGTCGTCCCTCCCGCCACT
GTTGGTTGGTGCACGCTCGCTACGCACACATACATACGCGAGCTAGCGTA
CACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC
TCCCCCCCTCTCTCTCACTTTCAATGGGCTTTCGATGCGTCTGCTCCAGT
TCTGAGGTGCTGTTTCGCGTTGTATACGGAAGTGTTCCCCTCTCACTCTT
GTGTGCGGTCGTGTGTTTGTGTGTTTTTCTTCTTCGCCCGTTTCGGGGCG
GTGTCGCTTTGCGATGCTGCTCCCTCTCTGCGTCGCTCTCTCTCCCTCTT
ATCTCCCTCTCTCTCCCTCTCTTTTCCCGCATGACTAGTACCCACTCCCC
CTCTCTCCAAATCGAAACCAAACCAAACCAAACCAAACCAAACCAAACCA
AACCAAACCAAACCAAACCAAACCAAACCAAACGACAGGTTCAGGACTCG
CGAGAGCTTCATGAAGAACGTCGTGAAGAACGCCCCCTTCGTGCAGTACC
CGAAGGTCATCAAGATGCTCTCCGCAGTCGAGGCGCTGTTCAAGAACATC
GAGAGCCTGCCTTCGGCGAGTGCCGAGGCGGGCACGAGGGTTCCGGTAAG
ATAAACACCAACAACGACGAACTGGGGGGGGGGGTGCTCGTCTTCGATAT
CATATTTTGGAATGTTATTTTGCATTTTGCGGCACCCGCGGGACGCTTCA
CACCCACGTCCCGGAGGGAGACCTTGTTTTTGTTTTGGGGGGGGTAAAGA
CATGTTCAACGACGATGGCGATTCAGCAATAGACCCTTGTTGTTGATGTG
TGTTCGACAGATTTTCTCCGAACGTCTACAGTAGACGAGGTCGTATTAGA
CCCCACTATCCACAACGGTGGTATTGTGGTGAGCTGCATGGGTGGTCTTC
GATTCGTAGTCGTAGGTGCTAAGACAGCTCTGTCGGGGGTAGGAAACCAT
ACGAGGTGTACTACCTATCTTACAGTTGGACACCGACGCGCTGAGTTTTT
TCCTCGCCAGCAGCGGAATATTGACCTTACTGTCCCGGTCCCCATCCGCC
GTCCCCCCGCCTCTCCCTCCGCCTCTCCCTCCGGGTGGCCGTTTTTTTTT
GTTTTTTGTGCACGTGCGTCACGCAGCTTCGAGAGGAGCAGCTATTCATA
GACACGATGCTGACGATCAACACCGAGGCCTTCCGCCTGCAGCAGGCGGA
AGGGGCGGACATCGGGTGAGGGGGAGGCTGCCGCTCGCACTGTTTTCTTG
TTTGTTGGCCTGGCTTGCGGGTGTCGCTTGGATCTAGGTCGCCCGCACGT
GTGCTCGCTTAGCCTTGTGTGGCTGCTGCCTTTGCTTCACTGATGTTTGT
CAAGAGTAGGTGGTGGGGCCCCTTGCGTGCAGACGCGCGTAATGTGTGTG
AGAATGCTCCTGTTGTGTTGCTTGATCCCATACGAAATGTCGTGGGTCGT
ACTAACTGTGCGTGCTCGCCGTTGCCTGGCTCGTGAATAGCTCGTCGGCT
CTGTCGTTTTGGCCGTCTTTTTTTTTTTTTTCCAACTCTGCTGGTTTGTG
CTTGTGTTCCCTCTTCTGTGCTGCTACTCTTGTGTTGAGGTTTGTTTGTA
CATATTTTCTTGTCTTAACAGCAAGTCCCGACATCTCGAGCGAAGAATCG
ACCAGCCGCGACACCGACGCCGTGCCCCCGCCGTGTGCGCGGTGTGCAAC
CGGACCGCCGTGCGCTTACTTCCCCTTGCCACTCTCTCTTTGTCAACAAC
CGATCGATCGAACCCCCCCCCCTCCCCCGCATCACAAATCGCCAAAGGCT
CAACACGCCAGAGTTCAGCCACAAGCGCGACGGTTTCAGCGGGAAGCCTT
CGGCGATGACGCCCCAGGGCCCCGTGCGCGCGGCGGCGACCGCGACGGAG
AAGCCGGCGGAGAAGCCGGCGGTGGCGGCGGCGGCGGCGGCGGCAGCGAC
GGCGAATGCCTCCGGCGGTGGCTGCAGCGGGGGCGTAGGCGGTGCCGGCG
GCGTCCCTCGCAGCAGCGGCGCCAACGCCGCTGCAGGGAGGGGGTTGGAC
ATGGTGGCGGCGGCGGCGGCGCAAGTGGTATCGAGAGATTCCGAAGGCGA
GGTGGTGCAGGGAGATTCGGCGCCAGTGGCGGCCTGCGCGGAGACTGCGG
CGGCGGCGGCGGCGGCGGCGGAGGCACGAAACGGCGAGGTAAGCGCGTGC
GTTGGGGGCATCATCCACATATTACGTCGTGACCGTGAGGGGGGAGGCGT
TAAGCTTGCTGGTACTCGTTTTGTGGCCTGGATTATCAAAAGAGTGCCGG
GATATGTTCCCCGCCCTTGAATAGAACCCCGAGCGGTAGAAAACTGTCAA
ACAGACCATGCACGTCTTGCGCAAAGCCAGCCCCCCCCTCCCCACAGCGC
GCCCAGTGAACATGTATTGACCAACGTGTGCCACTGCTCTCTGTTGTTGC
TCTCTGTTGTTCCCCCTGCACGAGCTCTCTCGCGCCCGATCGCTCTTTGA
CCCGCATGGTTGCCGACATGCCTGCCTGCCTTCTCGACTAACAAAACCGA
GTGGTCCGTTAGAGAACTGCCTACGCAAAGAAAGTCGGATTTTTTACGGG
AAAACGACGAGACAGGGGGCACGCAGACCGTAACCCCAACTTAGCCAGCC
GATTCTACGCTTTATCAAGTACATTTGCTTACTTTCGAAAAACCTGCTAG
ACTACTGCCTTTAAAACCTGCCCACCGGCGTAATGATTTGTCTCCAGGCG
AGTACGCGGTCGATACAGGGGGAGCAGCAGCGAGACGCCACCGGGCCACA
TACAAATCTAAGCCCCGTCCCCTCTAA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:510526..519002-

>mRNA_Ecto-sp6_S_contig83.17539.1 ID=mRNA_Ecto-sp6_S_contig83.17539.1|Name=mRNA_Ecto-sp6_S_contig83.17539.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:510526..519002- (Ectocarpus species6 EcLAC_371)
ATGAAGTTTGGCAAAAACATCGGGAGGGTTGTGGAGCTATCGGACCCGGA
GTGGTCGCCATTCTGGATCAACTACAAGTTCCTCAAGAAGAAGGTCAAGG
CTCTGGAGGTGCCGTCGGGAAAGCCGGAAGTATCGCCGGCCAAGCGTAGT
GACCCACAGGCGATGGCGAGATCGGCGGGAGAGGTGGAGTTCTACCGATT
GCTTCGGCAAGAGCTGTGCAAGTGCTCCGAGTTTTTCACCGGCGTGGAGG
GCCAGCTGGAGGTGAGACAGGCCAGGGTGAACGAGGGGTGGCGGCAGCTC
CTCCTGCCCAACGTGGCGGTGGAGGGCAACCCGAACAAGAGGCTCATGGC
GGCGTGCGTGAAGCTGTACAAGGACCTGCTGCTGCTGGAGAACTTCGCCA
TCATGAACTACTGCGGGTTCAGCAAGATCCTCAAGAAGCACGACAAGCTC
ACGGGGTTCAGGACTCGCGAGAGCTTCATGAAGAACGTCGTGAAGAACGC
CCCCTTCGTGCAGTACCCGAAGGTCATCAAGATGCTCTCCGCAGTCGAGG
CGCTGTTCAAGAACATCGAGAGCCTGCCTTCGGCGAGTGCCGAGGCGGGC
ACGAGGGTTCCGCTTCGAGAGGAGCAGCTATTCATAGACACGATGCTGAC
GATCAACACCGAGGCCTTCCGCCTGCAGCAGGCGGAAGGGGCGGACATCG
GGGAGGGGGTTGGACATGGTGGCGGCGGCGGCGGCGCAAGTGGTATCGAG
AGATTCCGAAGGCGAGGTGGTGCAGGGAGATTCGGCGCCAGTGGCGGCCT
GCGCGGAGACTGCGGCGGCGGCGGCGGCGGCGGCGGAGGCACGAAACGGC
GAGGCGAGTACGCGGTCGATACAGGGGGAGCAGCAGCGAGACGCCACCGG
GCCACATACAAATCTAAGCCCCGTCCCCTCTAA
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