mRNA_Ecto-sp6_S_contig83.17529.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig83.17529.1
Unique NamemRNA_Ecto-sp6_S_contig83.17529.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: D7G289_ECTSI (zf-LYAR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G289_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 7.550e-173
Identity = 323/345 (93.62%), Postives = 324/345 (93.91%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATATPAAAAVAQVTAVAEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKRPRGKLSEEEXXLQEAATGEEAEGARNGGGVDAATRKALAKAAIGAVKKAQDKRMAVKELVKQAAAAVLVARGREGSSCGSSKEHQPDDQKLRRALKQRLKTRGLRHVTVEGKVAVYSKG 1035
            MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATATPAAAAVAQVTAVAEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RPR       XX      GEEAEGARNGGGVDAATRKALAKAAIGAVKKAQ KR+AVKELVKQAAAAVLVARG EGSS GSSKEHQPDDQ LRRALKQRLKT GLRHVTVEGKVAVYSKG
Sbjct:   61 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATATPAAAAVAQVTAVAEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRXXXXXXXXXXXXXXXGEEAEGARNGGGVDAATRKALAKAAIGAVKKAQGKRIAVKELVKQAAAAVLVARGTEGSSSGSSKEHQPDDQTLRRALKQRLKTGGLRHVTVEGKVAVYSKG 405
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A7R9UG70_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG70_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.550e-43
Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATA 474
            MV+FVCE CNE+LKKAQVDRH   C++CW VTCVDC  TF  D +R+HTSC+SE +KY+ +    PK K++  G +E+W + V  A+ N +   AP  +   L ++  LGNVPR E+KF+NF+ NSLR+ DET V+++W Y+  +K+   A+++EATA
Sbjct:   18 MVFFVCEGCNESLKKAQVDRHAARCRACWAVTCVDCGKTFPDDEYRSHTSCISEAEKYEKSTRAVPKTKKQ--GPHEVWMEVVETASKNVAD--APPRIQGWLPKIQSLGNVPRVERKFRNFLGNSLRLRDETIVTEIWQYLSELKSRQKAEKQEATA 171
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A7S2SQW7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQW7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.220e-42
Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPK-----AKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYV 426
            MV+FVCE CNE+LKK QVD+H   C +CW VTCVDCN TFEGD +R HTSC+SE QKY+GAL++ PK       +K +G  EIW + V  AA  A S  AP  + + +  +   GNVPR + KF NFVKNSLRV  E  + ++W ++
Sbjct:    1 MVFFVCEGCNESLKKNQVDKHASFCSACWAVTCVDCNVTFEGDDYRQHTSCISEAQKYEGALYRGPKKGGETGSKKKKGPQEIWMEVVEQAA--AESQQAPANIRSMISNLSGFGNVPRNQNKFCNFVKNSLRVRSEPMIKQIWEFL 145
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A835Z9A3_9STRA (zf-LYAR domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.070e-42
Identity = 68/148 (45.95%), Postives = 107/148 (72.30%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSC--KSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVK 438
            MV+F CE CNE+LKKAQV++H+++C  ++CW VTC+DCN TF+GD +  HT+C+SE +KY+  ++K  K K   +   + W D V  AA++A++   P  + AHL RM D GNVPRQEKKF+NF++NSL+++D  ++  +W +++ ++
Sbjct:    1 MVFFNCEGCNESLKKAQVEKHVFTCPARNCWAVTCIDCNVTFKGDDYATHTTCISEAEKYEKTVYKGNKGKPVKKNPQDAWMDLVTEAAASAAT---PPAVRAHLQRMADFGNVPRQEKKFRNFLQNSLKLWDAGAIDAIWRHLEALR 145
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A7S4DDA0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA0_HETAK)

HSP 1 Score: 155 bits (392), Expect = 3.020e-41
Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKE 465
            MV+FVC+ CNETLK+ QVD H   C SC+ VTCVDCN +F  + ++ H +C+SE +KYQG L++APK K   +   E W + V+    N+++  AP  L ++L RM DLGNVPRQ KKF NFVKNSL +  +  V++LW ++DG++    AK++E
Sbjct:    1 MVFFVCDGCNETLKRNQVDTHAGRCHSCYAVTCVDCNVSFPDNDYKQHMTCISEAEKYQGNLYQAPKKKAGKQNPQEAWMELVV----NSANQPAPAGLKSYLQRMADLGNVPRQRKKFGNFVKNSLALRSDAVVAQLWDHLDGLRE--AAKQRE 149
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: W7TWJ6_9STRA (Zinc finger, C2H2, LYAR-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWJ6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.230e-36
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCK-SCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKA-----KQKNRGVNEIWADSVL-LAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDG 432
            MV+F CE CNETLKKAQV+ HL     S + V+CVDC+  F G S++AHTSC+SE +KY+ +L+K PKA     K K R   E W + +  +A  N+ +G     L  HL RM +LGNVPR EKKFKNF+ NSLR+       +LW Y+ G
Sbjct:    1 MVFFSCEGCNETLKKAQVESHLRRALCSRYPVSCVDCSQVFPGSSYQAHTSCISEAEKYEKSLYKGPKAGNKGGKGKKRNPQEEWMEMIASVACDNSETGGVNSILRRHLSRMAELGNVPRNEKKFKNFLNNSLRINRSNEQDELWKYLKG 151
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A7S3HA97_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HA97_9STRA)

HSP 1 Score: 139 bits (349), Expect = 9.000e-36
Identity = 71/167 (42.51%), Postives = 101/167 (60.48%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLTAKEKEATATPAAAAVAQ 501
            MV+FVCE CNET+KK QVD+H   C+SC  VTCVDC+ TF G+ +  H +CVSE +KY+  L+KA   K     +N  +A +  +  + + +  AP  +  +L R+G+L NVPR +KKF NF KNSLR++ +  +  LW Y+D  +     KE    A P   AV +
Sbjct:    1 MVFFVCEGCNETVKKNQVDKHASRCRSCHAVTCVDCSVTFYGNDYAEHITCVSEAEKYEKTLYKAKAVK-----LNPQYAWNAQIETATSKAETAPAIVRPYLQRLGELNNVPRNKKKFINFAKNSLRLYSDNVLEALWNYLDTYRVLPATKEAPQKAEPVVEAVVE 162
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A8K1FM11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM11_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 1.160e-34
Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLW-AYVDGVKNDLTAKEKEATAT 477
            MV+FVCE CNETLKK +VD H   C++CW V+CVDC+  FEG+ + AHTSC+SE QKY+G+L+   KAK K     E W D V     NA++G   K L + L R+    NVPR++ KF NF+KNS+   D   + K+W  + D  K    A E EA AT
Sbjct:    1 MVFFVCEGCNETLKKNKVDAHAARCRNCWAVSCVDCSVVFEGNDYAAHTSCISEAQKYEGSLY---KAKSKKMSPQERWMDVV----QNATAG-NDKKLQSVLSRVAGYDNVPRKKAKFVNFMKNSIGGGDMAIIEKVWNVFEDAYK----ASEAEANAT 148
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A6A4Z0P0_9STRA (zf-LYAR domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z0P0_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.760e-34
Identity = 71/152 (46.71%), Postives = 92/152 (60.53%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPK-AKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAH-LVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVS-KLWAYVDGVKNDL 447
            MV+FVCE CNETLKK +VD H   CK+CW VTCVDC   F+G+ +  HT+C+SE QKY+GAL++ PK +KQ  +   E W D V        S  AP P     L R+    NVPR++ KF NFVKNS+     T V  +LW +++   N L
Sbjct:    1 MVFFVCEGCNETLKKNKVDAHAARCKNCWAVTCVDCQVVFKGNDYATHTTCISEAQKYEGALYQGPKLSKQAKKNPQEKWMDLV-------QSSTAPDPKVNQALQRIAGYDNVPRKKPKFLNFVKNSIGF---TGVEDQLWTFLETEFNKL 142
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BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Match: A0A485KW80_9STRA (Aste57867_12667 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW80_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.200e-34
Identity = 76/163 (46.63%), Postives = 101/163 (61.96%), Query Frame = 1 
Query:    1 MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTSCVSEDQKYQGALFKAPK-AKQKNRGVNEIWADSVLLAASNASSGVAPKPLCAHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVS-KLWAYVDGVKNDLTAKEKEATATPA 483
            MV+FVCE CNETLKK +VD H   C++CW VTCVDC   F+G+ + AHT+C+SE QKY+GAL++ PK AKQ  +   E W D  L+ +S A      + L     R+    NVPR++ KF NF++NS+ V   T V  KLW +++   N L    KE TA PA
Sbjct:    1 MVFFVCEGCNETLKKNKVDAHAARCRNCWAVTCVDCQVVFKGNDYAAHTTCISEAQKYEGALYQGPKGAKQAKKNPQERWMD--LIQSSTAPEAKVNQAL----QRIAGYDNVPRKKPKFLNFLRNSIGV---TGVEEKLWTFLETEFNKL----KETTAEPA 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G289_ECTSI7.550e-17393.62zf-LYAR domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7R9UG70_9STRA1.550e-4349.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SQW7_9STRA1.220e-4251.70Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A835Z9A3_9STRA6.070e-4245.95zf-LYAR domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4DDA0_HETAK3.020e-4148.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TWJ6_9STRA3.230e-3649.01Zinc finger, C2H2, LYAR-type n=1 Tax=Nannochlorops... [more]
A0A7S3HA97_9STRA9.000e-3642.51Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8K1FM11_PYTOL1.160e-3447.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4Z0P0_9STRA3.760e-3446.71zf-LYAR domain-containing protein (Fragment) n=1 T... [more]
A0A485KW80_9STRA4.200e-3446.63Aste57867_12667 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:415589..419641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score498.0
Seed ortholog evalue3.4e-138
Seed eggNOG ortholog2880.D7G289
Preferred nameLYAR
Model size1038
KEGG koko:K14785,ko:K15263
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0001750,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005929,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022613,GO:0030097,GO:0030099,GO:0030100,GO:0030154,GO:0030218,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032879,GO:0034101,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042592,GO:0042995,GO:0043005,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0045807,GO:0045892,GO:0045934,GO:0046483,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0050764,GO:0050766,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0060627,GO:0061515,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0120025,GO:0120038,GO:1901360,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons7
EggNOG free text desc.erythrocyte development
EggNOG OGsKOG2186@1,KOG2186@2759
Ec32 ortholog descriptionZinc finger, C2H2, LYAR-type
Ec32 orthologEc-16_002050.1
Cds size1038
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17529.1prot_Ecto-sp6_S_contig83.17529.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig83 415589..419641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350465.3104525-CDS-Ecto-sp6_S_contig83:415588..4158041682350465.3104525-CDS-Ecto-sp6_S_contig83:415588..415804Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 415589..415804 -
1682350465.3229015-CDS-Ecto-sp6_S_contig83:416354..4165991682350465.3229015-CDS-Ecto-sp6_S_contig83:416354..416599Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 416355..416599 -
1682350465.3329782-CDS-Ecto-sp6_S_contig83:417125..4173421682350465.3329782-CDS-Ecto-sp6_S_contig83:417125..417342Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 417126..417342 -
1682350465.3432631-CDS-Ecto-sp6_S_contig83:417705..4178641682350465.3432631-CDS-Ecto-sp6_S_contig83:417705..417864Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 417706..417864 -
1682350465.3531709-CDS-Ecto-sp6_S_contig83:418781..4188411682350465.3531709-CDS-Ecto-sp6_S_contig83:418781..418841Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 418782..418841 -
1682350465.3686006-CDS-Ecto-sp6_S_contig83:419218..4193261682350465.3686006-CDS-Ecto-sp6_S_contig83:419218..419326Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 419219..419326 -
1682350465.3765764-CDS-Ecto-sp6_S_contig83:419608..4196411682350465.3765764-CDS-Ecto-sp6_S_contig83:419608..419641Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 419609..419641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig83.17529.1

>prot_Ecto-sp6_S_contig83.17529.1 ID=prot_Ecto-sp6_S_contig83.17529.1|Name=mRNA_Ecto-sp6_S_contig83.17529.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=346bp
MVYFVCESCNETLKKAQVDRHLYSCKSCWGVTCVDCNFTFEGDSFRAHTS
CVSEDQKYQGALFKAPKAKQKNRGVNEIWADSVLLAASNASSGVAPKPLC
AHLVRMGDLGNVPRQEKKFKNFVKNSLRVFDETSVSKLWAYVDGVKNDLT
AKEKEATATPAAAAVAQVTAVAEEPKEKTAATTEPARKSSKKEKKSKKRT
REEAADTGNGGTADGSDNGSGGGEKRPRGKLSEEEKKLQEAATGEEAEGA
RNGGGVDAATRKALAKAAIGAVKKAQDKRMAVKELVKQAAAAVLVARGRE
GSSCGSSKEHQPDDQKLRRALKQRLKTRGLRHVTVEGKVAVYSKG*
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mRNA from alignment at Ecto-sp6_S_contig83:415589..419641-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig83.17529.1 ID=mRNA_Ecto-sp6_S_contig83.17529.1|Name=mRNA_Ecto-sp6_S_contig83.17529.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4053bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:415589..419641- (Ectocarpus species6 EcLAC_371)
ATGGTGTACTTTGTGTGCGAGTCGTGCAATGAGGTGTGTGTGTGTGGCGA
GGAAGGTCCGGTACACAGCAGGACAGCGAGGGCGGCAGCGAGAGGAGCTC
CTTGTTTCGTAGCCCGCCGCGCGTGAACACTCAAGCTGACTTATCTGGTG
TCCTTGAGACGTGCCTTCATGGTATGGTTGGGTATCCGAGTTGGATATGA
TGTGCTGTGTGCTTGTGTACATGTAGTCGTACAGAAAACTCATTGCTGGT
CCGCTTCCTTGCCCTCTTGCGTTTTGCGTATCCTCGGCAACCTTTGGCGT
ACTGCTGTGCCTCAGACGCTGAAAAAGGCGCAGGTCGACAGGCACCTCTA
CTCGTGCAAGAGTTGCTGGGGCGTGACTTGCGTGGACTGCAACTTCACCT
TCGAAGGCGATTCGTTCAGGGCGGTAAGGGCCGCGTGGGGGGGTGTGTGA
GGGCGAGACACAGAGAACGAGAGAGAGTGTGTGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGACGCGTCAGGTACCGTTGAAGGTACATAGTG
CAAGAGGGTCCTCATGGGGAAATGGTCGATGCACGGACAGACAGATACCC
AACTGCCTGCACTCTTCTAGACAAGAAAGTCGTCCATATCCTTAAGGCGA
TGAGTACGTAGCCTGAGAGGCTCCCTGTTGGTCCGAGAGAAAGCAAAGTC
TGGCGTACGTGATTGATCTTGTGTCCCCCTGTCCGCCGTGCGTGCAACAA
TCATGATCCCGATAACTACTGACTGCTGCCCCCTCGCCGTCCTTTTGCAG
CACACCTCTTGCGTGTCCGAGGACCAGAAGTACCAAGGCGCTTTGTTCAA
GGCTCCAAAGGTGCGAAACGCAAAAACCCATCCGATACGCATGTATGTCA
TTACAATTCCACAGCATCACCGCAGACTGACCTACCGCATGTATGTGAAG
GTGGCTCCACGTCTCGCGGGTATTCACGCGTTACATCAGCGTATATTCCC
ACCGCCTACTGGAAACAATCGCATGCCAATGTAGCCCGGGCGGTATATTT
GGTACATCGGTACACGAGACAGGGCACAAGGAAAGTCAGCGCTGTGTGGT
GTGGGCGTGCAATGGCGATTGGTGTGGAGACCACCTTTATAAAGGTACAA
TCTTCCCAACGTCTGTCGAGGACGATTCCCTCTTTTCACAATGACATCGA
CGGTCAGATTGTGTGCTTTTGGTTGCAAAAGACACGGATTCAAAACCCGC
TGCTCACCAAATTTTCTTCCGGACAACGGAAAAAGAAAAACGGTGGGTGG
GCCAAGGAAGAACGCACTGGCTACCGAACTCGGCACTTCTGTAATCACGC
ACAGAGGATTGTGAAGAAAAGCGAATCGCCCCGCCGCCAGCCGGTTGGGT
TCCGGTTGCCCCAAGAAGACTTCTCTTGCCTAGCAAACAAGAAAAAGTCT
CGAAAAAGGGGGGGGTAATGTGGAGACCACCTTCATAAAGGTACAATCCC
CCCAACGTCTGTCGATTCCCTCTTCTCATTGAGTGTGTTTACCTCACCGG
GGCGAAAGACAGCACTCGCACCGCAACCAACCGCATTCTCTTGCGAAGCC
CATTCGCGTGCTTCCACAGTCGTAGTGGTACTCGCTTGCCCTTCGCAAGC
CACCGAACTGAAGACGAGGGACCGGGTGCACTGCTGTGTATTCTGCATGC
TGGGCCCACTTCCTCATTCTAGTTCGCTACCCCCCCGCCACCCCGGGTGC
ATGCACACGTGTGCCGACGTTAACCAGGCCAAGCAGAAGAATCGCGGAGT
GAACGAGATCTGGGCCGATTCTGTCCTGCTTGCCGCGAGCAACGCCTCTT
CCGGTGTTGCTCCCAAGCCGCTGTGCGCCCACCTGGTTCGCATGGGAGAC
CTCGGCAACGTGCCGCGCCAGGAGAAGAAATTCAAGGTGCGGAAGGACAG
CAGCAGCAGAAGCAGTAGGAGTCATGAAACTTCGCGGGCGGTATTTTGCA
CACTCTGCAGTGTTCCGCGTGTGCATATGCATGGCTGATAGTATTCACGC
GGGTATTTACGTGCGTCAATGTGTCGTATTTCTTTGGCGTGTTTCTTTGA
TTGGCATCGACCGCGGTAACCGGCTGACGCTAGAAAATTCACCAGTCTTG
CGTGTGCGTGTTCCCGCGTGTGCGTGTGCTGTTCACCCTCTAGCACTCGC
TGTGTGTGTACACCGGTTGCCGTTGGCCGCTTGGATTTTTTCTCTTGACA
CGTGCTTGCTCTGCGGACGTGTTTTTTTTCGATGGTCGTGACGAAACAGA
ACTTCGTAAAGAACAGCCTTCGTGTGTTCGACGAGACCAGCGTCTCCAAG
CTGTGGGCCTACGTTGACGGCGTCAAGAACGACCTGACGGCAAAAGAGAA
GGAGGCGACGGCGACGCCGGCAGCGGCGGCCGTGGCCCAAGTAACGGCTG
TGGCCGAAGAGCCTAAGGAGAAGACAGCCGCGACAACAGAACCCGCACGA
AAATCGTCCAAGAAAGGTATATCTTGTTTGACAAGGACAGCAACGTTTGT
GTACAAAAGGCGGGCCGGCATAAATGTTTGTGTATAGGAGGAGCAGGAGC
AGACTCTTTCTGTCGGGCATAGTAGTGGGACGGGGATGGGGGTCACGGTT
CACGTAAAAAACTCCGGGAAACTCCCAAGAATCTTGTGTTTTGGCGTGTA
GTAGGGTAGAGTACATGGCGGTACGCTGGTGGTTGTGTGAGAAGCATGTA
GCATCACGATTTTTGTGTGTAGACGTTGTTGGAAATACAGCGTATTTCGA
CAACACCAATACCTTTAATCCCCAGGGATTTTGATATCGATCCCGCAGAA
TCCACAACTCTCATGCCGATGGCACCCCCCCCAACCTTCAAGCGTGCAAT
TGCCACGAACCAGCCTTACGCCGCGCGTTAGTGGTGTGAACTCGTGCCGA
CAACCTGTGTGCGTTTGCACCAAACCTCCCTCCCCCCCTTCCTTCCTCCT
GTTTCTCTTCCTGCACGCGCGACCGCATCACCATCGCCACAGAGAAAAAG
AGCAAAAAGCGAACGAGAGAAGAGGCGGCGGATACGGGGAACGGGGGGAC
TGCAGACGGCAGCGATAACGGTAGCGGTGGCGGCGAAAAGAGACCGCGAG
GAAAGCTGTCAGAAGAGGAGAAGAAGCTGCAAGAGGCGGCGACCGGCGAA
GAAGCCGAGGGTGCGAGAAACGGTGGTGGGGTAGATGCGGCCACTCGCAA
GGCGTTAGCCAAGGCGGCTATCGGCGCTGTGAAGAAGGTGGGCGGGGGGT
GATGCGGCCACACGAAGGGCAGTCGGCTGTGCTCTTCTATGGGTGTTTTG
GCTCACGTAGTGTTTTGATCTAACCAAGCGCCCAAAACTATAGCGTCATG
TCACGAGACACACGGCGGGTGCATGACGGCAGCAGCAAAACCACCCACAA
ACCTCAACACGCTCAAATAACCAAGGCGCACGCCGTGCACCTACCCATCG
TGTCCCGAATCTTGGCTTGAGTTCGTCAATGTTTGCCGCCAGCAGCAAGT
TGGTCGGCGGCAAGGACATCGCTACCGTGTTGAAATTCGTCACGATCGTA
CCTCTCTTCCCTGCAGCCAGTATTGATTGCTGGGTGAGTGTAAACGACGT
CTCTACACGCGGGTGCGTTAAGAACGATGGTTTGAAAAAACTGCCGGTGG
CGTGTAGTATTCTGAATAGTTGCCCCCCGATTGACCAGCCTTCCTCCTTG
TTGCCGTTTTTTTTTCCGCTTGGTGTCCTCATGTTTTTTTATTCCCAACC
CTCTCTACCTCAACTGTTCTGTCTCAATTTCCACCAGGCTCAGGACAAGA
GGATGGCGGTGAAGGAACTTGTCAAGCAGGCGGCGGCGGCGGTGTTGGTG
GCAAGAGGCAGGGAGGGCAGCAGCTGCGGCAGCAGCAAGGAGCACCAGCC
GGACGACCAGAAGCTGAGGCGTGCCCTGAAGCAGCGGTTAAAGACCCGGG
GGCTCCGCCACGTGACGGTGGAAGGGAAGGTGGCCGTCTACTCCAAGGGA
TAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:415589..419641-

>mRNA_Ecto-sp6_S_contig83.17529.1 ID=mRNA_Ecto-sp6_S_contig83.17529.1|Name=mRNA_Ecto-sp6_S_contig83.17529.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:415589..419641- (Ectocarpus species6 EcLAC_371)
ATGGTGTACTTTGTGTGCGAGTCGTGCAATGAGACGCTGAAAAAGGCGCA
GGTCGACAGGCACCTCTACTCGTGCAAGAGTTGCTGGGGCGTGACTTGCG
TGGACTGCAACTTCACCTTCGAAGGCGATTCGTTCAGGGCGCACACCTCT
TGCGTGTCCGAGGACCAGAAGTACCAAGGCGCTTTGTTCAAGGCTCCAAA
GGCCAAGCAGAAGAATCGCGGAGTGAACGAGATCTGGGCCGATTCTGTCC
TGCTTGCCGCGAGCAACGCCTCTTCCGGTGTTGCTCCCAAGCCGCTGTGC
GCCCACCTGGTTCGCATGGGAGACCTCGGCAACGTGCCGCGCCAGGAGAA
GAAATTCAAGAACTTCGTAAAGAACAGCCTTCGTGTGTTCGACGAGACCA
GCGTCTCCAAGCTGTGGGCCTACGTTGACGGCGTCAAGAACGACCTGACG
GCAAAAGAGAAGGAGGCGACGGCGACGCCGGCAGCGGCGGCCGTGGCCCA
AGTAACGGCTGTGGCCGAAGAGCCTAAGGAGAAGACAGCCGCGACAACAG
AACCCGCACGAAAATCGTCCAAGAAAGAGAAAAAGAGCAAAAAGCGAACG
AGAGAAGAGGCGGCGGATACGGGGAACGGGGGGACTGCAGACGGCAGCGA
TAACGGTAGCGGTGGCGGCGAAAAGAGACCGCGAGGAAAGCTGTCAGAAG
AGGAGAAGAAGCTGCAAGAGGCGGCGACCGGCGAAGAAGCCGAGGGTGCG
AGAAACGGTGGTGGGGTAGATGCGGCCACTCGCAAGGCGTTAGCCAAGGC
GGCTATCGGCGCTGTGAAGAAGGCTCAGGACAAGAGGATGGCGGTGAAGG
AACTTGTCAAGCAGGCGGCGGCGGCGGTGTTGGTGGCAAGAGGCAGGGAG
GGCAGCAGCTGCGGCAGCAGCAAGGAGCACCAGCCGGACGACCAGAAGCT
GAGGCGTGCCCTGAAGCAGCGGTTAAAGACCCGGGGGCTCCGCCACGTGA
CGGTGGAAGGGAAGGTGGCCGTCTACTCCAAGGGATAG
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