mRNA_Ecto-sp6_S_contig83.17496.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI) HSP 1 Score: 541 bits (1395), Expect = 1.300e-194 Identity = 260/273 (95.24%), Postives = 262/273 (95.97%), Query Frame = 1
Query: 25 MHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATSKRERYFSKEALDVIKMVYGKDYSLFGEYFEEHSASRLQ 843
MHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRL GCKVNSHWRPQHCFCSIARFRESYHVVPFANMS TEAVNLVDHMRRPSPDRAELLREFIV+RFSSNQDAKAQGATSKRERYFS+EALDVIKMVYGKDYSLFGEYFEEHSASRLQ
Sbjct: 1 MHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLTGCKVNSHWRPQHCFCSIARFRESYHVVPFANMS----------TEAVNLVDHMRRPSPDRAELLREFIVQRFSSNQDAKAQGATSKRERYFSQEALDVIKMVYGKDYSLFGEYFEEHSASRLQ 263
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 7.380e-139 Identity = 188/193 (97.41%), Postives = 192/193 (99.48%), Query Frame = 1
Query: 1 MRVRSSGAMHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSAS 579
MRVRSSGAMHPAMYVP DGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAA+NDEPRKVFRDFMLGV++DVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSA+
Sbjct: 158 MRVRSSGAMHPAMYVPGDGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAINDEPRKVFRDFMLGVQKDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSAN 350
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI) HSP 1 Score: 160 bits (406), Expect = 3.410e-43 Identity = 91/269 (33.83%), Postives = 133/269 (49.44%), Query Frame = 1
Query: 52 DGMIYCPIAKVACAEWRKTLRWMLGIPDW--DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQ----------NCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRG--CKV-NSHWRPQHCFCSIARFRESYHVVPFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSN--QDAKAQGATSKRERYFSKEALDVIKMVYGKDYSLFG 807
+G+IYCPIAKVA AEW+++LRWM+GI DW + +H GKNG+ L I + D + +FVVVRDPA+RL+SAFLNKC+ + NC Y MP FP ++ T R + EP F F G+ +++ G CKV N H++PQ CFC + ++HV+PF NMSA + F + E + + H A + + I K Q + G + R + + + + KD + G
Sbjct: 69 EGIIYCPIAKVASAEWKRSLRWMVGIEDWMGNHTNLHSAGKNGLERLQEWGLEGITWALESDRYFRFVVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTLFPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKREGDACKVSNHHFQPQMCFCDLREILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTG 337
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE) HSP 1 Score: 152 bits (383), Expect = 5.400e-40 Identity = 93/278 (33.45%), Postives = 135/278 (48.56%), Query Frame = 1
Query: 34 AMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMP-----QRFPGVSKRDAATDTK---FRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQD--AKAQGATSKRERYFSKEALDVIKMVYGKDYSLFGEYFEEH 825
A+ + ++ ++YCPI KVAC EW K RW+ G DW P H K+G+ +L ++N WLKF VVR+PA RLLS FL KC + E+ NCPY E P +RFP DT + A + +F ++ + R V+ C N HW PQ+C CS+ + +V +ANM TEA + S R ++EF+V R +N + K A S+ + ++ EAL + Y KDY LF +Y+ E+
Sbjct: 107 ALALKSERIVYCPIQKVACTEWIKVFRWIDGHEDW-AEPRHQ--KHGLDVLEEMDVERGNQILNSPDWLKFAVVREPAQRLLSCFLQKCNRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPGVDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQDPCGQNKHWSPQYCHCSLDVTAPVFRIVGWANM-----------TEAASAAIVPFASSSARGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEAYTAEALQAVHEAYAKDYKLFSQYWVEN 370
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A5J4YVB4_PORPP (Carbohydrate sulfotransferase 14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVB4_PORPP) HSP 1 Score: 94.0 bits (232), Expect = 4.840e-18 Identity = 71/277 (25.63%), Postives = 130/277 (46.93%), Query Frame = 1
Query: 7 VRSSGAMHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDW-DTGPIHDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPG--VSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFI---VKRFSSNQDAK--AQGATSKRERYFSKEALDVIKMVYGKDYSLFGEY 813
+R+S A + + +IYCP+ KVA + ++ +R G D+ D H + ++G+ L+ ++E +M D ++LKFV VR+P DR+LS +LNK + + ++ Y ++ Q + +++RD ++ K F++F+ + ++N HW Q CS+ F + V F NMSA AEL+ + + ++RF S +D K A A+ K +Y+S + ++ ++ Y D+ EY
Sbjct: 245 LRASAAANRIIVSEKSRLIYCPVPKVANSNFKMLIRKFEGFEDYADLLTAHSRARSGLRFLSSYSVEEVEALMKDPTFLKFVFVRNPLDRVLSCYLNKIVNKDPKSEEYATYLGQLYGWRFLTQRDYKSERK----------PSFQEFVNAISLQSPW---QMNEHWALQSFLCSLDVFPYDF-VGRFENMSAD-------------------------AELVLQAVGRVLERFPSQKDIKFLANEASKKINKYYSPQIMERVRNTYACDFRSMPEY 482
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A812MLT8_9DINO (CHST8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MLT8_9DINO) HSP 1 Score: 90.1 bits (222), Expect = 3.720e-17 Identity = 71/276 (25.72%), Postives = 114/276 (41.30%), Query Frame = 1
Query: 43 VPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNG-----IPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQN----------CPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVV----PFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQG---ATSKRERYFSKEALDVIKMVYGKDYSLF 804
+P+ +++C + K + W+ LRW++G+ DW + P H++ NG + L +A I++M+ D SW K VVRDP DRL SA+L+K GG N PY F FP DF+ V + N HW+ Q C + +F Y V P +M A +S +D + + +P+ + V+ FS + AKA +K + ++ + +Y +DY LF
Sbjct: 86 IPSHRLVFCYVPKCGTSRWQTFLRWLVGVQDWASNP-HNRDANGYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGGNDPNNTHLTKDLFGLPYEAFNATNFP--------------------------DFVTRVEFGMHHALEHENPHWQRQSRTCDLGKFLPFYQHVFFMAPDKSMRAELSDC---------FIDAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCQKARQLYAEDYELF 318
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A7S3ED89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED89_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 2.830e-16 Identity = 65/248 (26.21%), Postives = 108/248 (43.55%), Query Frame = 1
Query: 61 IYCPIAKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVVPFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATSKRERYFSKEALDVIKMVYGKDYSL 801
+YCP+ K+AC+ W+ R + G D+ + HD+ +G+ L + M+ D WLKFV VRDPA RLLSA+L+K E + + +F Q G R A + + F +F++ V R +N HW PQ C + +F + + RF +A ++D + +P EF + S + G K + +F+ E +++ + +DY L
Sbjct: 215 MYCPLPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYVGRQNDF---DMNEHWAPQVYLCQMDKFPYDF-----------VGRFENYDADAFAVLDALGQPQE-------EFPSQ---SKLGFPSMGTREKMDEHFTDEIRTQVELKFERDYRL 428
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A812MHH0_9DINO (Chst9 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MHH0_9DINO) HSP 1 Score: 86.3 bits (212), Expect = 8.160e-16 Identity = 68/265 (25.66%), Postives = 114/265 (43.02%), Query Frame = 1
Query: 43 VPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPIHDQGKNGIPLLARRK----ARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVV----PFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQG---ATSKRERYFSKEALDVIKMVYGKDYSLF 804
+P+ +++C + K + W++ LRW++G+ DW + P N I L + K A I++M+ D SW K VVRDP DRL SA+L+K G N P + G+ + + + F DF+ V +R N HW+ Q C ++ F Y V P M A +S ++ + + +P+ + V+ FS + AKA +K + ++ + +Y +DY LF
Sbjct: 78 IPSHRLVFCYVPKAGTSRWQRFLRWLVGVQDWASNPHIRDANNYIGGLMQLKHLPRAEAIQIML-DPSWTKMAVVRDPLDRLRSAYLDKIAGA---NDPGNTNFTKHLFGLPYENFTSTS-------------FSDFLRRVEFGMRHSLDHENKHWQRQSHRCDLSTFLPFYQHVFFMPPDKTMRAELSDC---------FIEAVAKTAPNPS------AVRNFSFGESAKALAEHRTDAKDHATYDEQLCLKARQLYAEDYELF 310
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A812M394_9DINO (Chst8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M394_9DINO) HSP 1 Score: 84.0 bits (206), Expect = 5.610e-15 Identity = 66/264 (25.00%), Postives = 112/264 (42.42%), Query Frame = 1
Query: 43 VPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPI------HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFRESYHVV----PFANMSASISRFNLGLTEAVNLVDHMRRPSPDRAELLREFIVKRFSSNQDAKAQGATSKRERYFSKEALDVIKMVYGKDYSLF 804
+P+ +++C + K + W + LRW+ G PDWD P H G + L R +A I M D W K VVRDP DRL SA+L++ +G N + + + + + A+M+ F DF+ V + + HW+ Q C + +F YH V P + A +S +++ + + +P+ AE+ + R S + A A S + +E + +Y +DY +F
Sbjct: 80 IPSRRIVFCDVQKAGSSRWLRLLRWLAGSPDWDGNPHFLDSEGHPGGLRRLEHLPREEAVQI---MRDPKWTKIAVVRDPLDRLRSAYLDRVVGATEPNEIFEKRLFAHYQSL------------ASMS------FSDFLARVELGMHFLE-NEDVHWQRQSRRCDLGKFLPLYHHVFIIPPDKSARAEVSDC---------VLEALAKTAPNPAEVRNFSMTSRASESLVAHRTDAES--HSTYDEELCLKARQLYAEDYEVF 310
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Match: A0A7S2ZL45_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL45_9RHOD) HSP 1 Score: 84.3 bits (207), Expect = 6.360e-15 Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 1
Query: 61 IYCPIAKVACAEWRKTLRWMLGIPDWDTGPI-HDQGKNGIPLLARRKARDIELMMNDDSWLKFVVVRDPADRLLSAFLNKCLGGEWQNCPYTEFMPQRFPGVSKRDAATDTKFRAAMNDEPRKVFRDFMLGVRRDVRLRGCKVNSHWRPQHCFCSIARFR-------ESYHVVPFANMSA 576
+YCP+ K+AC+ W+ R + G D+ + HD+ +G+ L + M+ D WLKFV VRDPA RLLSA+L+K E + + +F Q G R A + + F +F++ V R +N HW PQ C + +F E+Y FA + A
Sbjct: 215 MYCPLPKIACSNWKSLFRKLEGFKDYKNLALAHDKANSGLKYLKDYTEEEALKMVQDPEWLKFVFVRDPASRLLSAYLDKFDRRELDSPEFIKFFDQLL-GFQYRKNAVELFMPS---------FEEFIMYVGRQNDF---DMNEHWAPQVYLCQMDKFPYDFVGRFENYDADAFAALDA 381 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig83.17496.1 >prot_Ecto-sp6_S_contig83.17496.1 ID=prot_Ecto-sp6_S_contig83.17496.1|Name=mRNA_Ecto-sp6_S_contig83.17496.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=282bp MRVRSSGAMHPAMYVPADGMIYCPIAKVACAEWRKTLRWMLGIPDWDTGPback to top mRNA from alignment at Ecto-sp6_S_contig83:174746..179319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig83.17496.1 ID=mRNA_Ecto-sp6_S_contig83.17496.1|Name=mRNA_Ecto-sp6_S_contig83.17496.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4574bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:174746..179319+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:174746..179319+ >mRNA_Ecto-sp6_S_contig83.17496.1 ID=mRNA_Ecto-sp6_S_contig83.17496.1|Name=mRNA_Ecto-sp6_S_contig83.17496.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:174746..179319+ (Ectocarpus species6 EcLAC_371)back to top |