mRNA_Ecto-sp6_S_contig83.17484.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig83.17484.1
Unique NamemRNA_Ecto-sp6_S_contig83.17484.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 745 bits (1924), Expect = 2.940e-262
Identity = 426/440 (96.82%), Postives = 427/440 (97.05%), Query Frame = 2 
Query:    5 GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMGASTGVPIGRRGGGTATRDKQLGXXXXXXXXXDGVATGGDFELGEKRTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGEGPGAKAKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXGLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKFMPPRSRRRCWGXXXXXXXXXGRSSYELVAK 1324
            GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAM ASTGVPIGRRGGGTATRDKQLGXXXXXXXXX+GVATGGDFELGEK TESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGD     AKAKEQ GVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXX LLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAK MPP S RRCWGXXXXXXXX GRSSYELVAK
Sbjct:   76 GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKGMPPGSSRRCWGXXXXXXXXDGRSSYELVAK 515
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 575 bits (1482), Expect = 5.890e-195
Identity = 311/337 (92.28%), Postives = 318/337 (94.36%), Query Frame = 2 
Query:    2 YGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMGASTGVPIGRRGGGTATRDKQLGXXXXXXXXXDG---VATGGDFELGEKRTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGEGPGAKAKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1003
            YGNLRLWGAIGFGIASLIGG+VCDSYGGSYTGVMIVFVANVAVAM ASTGVPIGRRGGGTATRDKQLG XXXXXXXX     VATGGDFELGEKRTESPVSPRT++RGCAVARDKT GEP+C GLIGTAAVTPAVATDTAATAD    HL DDDEPEGNDEAQTH+ALLSRPRTTSDKDGGGD NGSSG SRGDGEGPG KAKEQGGVLMAVRIM  TGESASFFMAVGLSGMG+GVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLR+PWWVLPAEVLHGLTFAAMWAATTEYAHGIAP
Sbjct:  127 YGNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGGXXXXXXXXXXXXXVATGGDFELGEKRTESPVSPRTATRGCAVARDKTAGEPKCAGLIGTAAVTPAVATDTAATADGNHDHLYDDDEPEGNDEAQTHSALLSRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 463
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 5.090e-81
Identity = 175/335 (52.24%), Postives = 207/335 (61.79%), Query Frame = 2 
Query:    2 YGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMGASTGVPIGRRGGGTATRDKQLGXXXXXXXXXDGVATGGDFELGEKRTESPVSPRTSSRGC-AVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGEGPGAKAKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1003
            +G+ RLWGA+GFG ASL+ GYVCD YGGS++GVM+VFV NV VA+ ASTGVPIG+        +    XXXX     +G A+GG    GE    +         G   V ++  +        + T+  +           + + LH                A L   P         GD+    G         GA   E+ GV+MA+RIM+ T ESASFF AV LSGMG GVIDTFLFIRLEELGGS VLCGLARLIMC+AEVPFFYLSGPLIRR G RGVIAL Q+AYLTRF+YYSVLR+PWWVLP+EVLHGLTFAAMWAATT+YAH IAP
Sbjct:   96 FGSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQ------VNNDXXXXXXXNDQNIEG-ASGGSNASGEVLESADRENNDKGIGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXXQTTDGDALLEYHP---------GDSRTGGGXKXXXXXXXGAG--EKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 412
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 3.420e-59
Identity = 135/340 (39.71%), Postives = 181/340 (53.24%), Query Frame = 2 
Query:    2 YGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMGASTGVPIGRRGGGTATRDKQLGXXXXXXXXXDGVATGGDFELGEKRTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGEGPGAKAKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTT 1021
            YG  R WGA G+G+A+LI G+V D+ GGSY G+M+VFV  +A+A+ A+ GVP+GR                             +   G +  E P   R+ +     A  +TE       L+ T        T+T      + +++ DD E E + +   H                                     +E+  V   + IM    ++ SFF+ V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP   +T+
Sbjct:   41 YGTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRT----------------------------NEPAGGQDDEEPRGDRSGTSDNWSAHGETE-------LVETGRAREDEVTNTRPC---VGMNV-DDLEDEESSKRPDHVE-----------------------------------QEEHRVASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 306
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 2.170e-48
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 2 
Query:  599 KEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTT 1021
            +E+  V   + IM  T ++ SFF+ V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP   +T+
Sbjct:  225 QEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 365
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: D7G0X9_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 5.880e-40
Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 2 
Query:  779 MCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYS----------------VLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXGLLYAGLGASRCFAVSAALPSLSLLLLVL 1171
            M  +EVPFFY+SGPLIR +G R V+AL+Q+ Y+ R IYYS                VL  PWWVLPAE+ HGLTFAAMW+ATT+YAHGIAPAHLRTT+Q  V                G+ YA LG  RCF  +AALP+LSLL LV+
Sbjct:    1 MSFSEVPFFYVSGPLIRTIGPRNVVALSQIGYIVRLIYYSKTSSVTNPLTGLRHLQVLSDPWWVLPAELFHGLTFAAMWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLLFLVI 147
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE)

HSP 1 Score: 159 bits (401), Expect = 4.190e-38
Identity = 79/198 (39.90%), Postives = 114/198 (57.58%), Query Frame = 2 
Query:  596 AKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXGLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRW 1189
            A +Q  ++  + +M     +  FF+ + LSG GAG+ID +LFI +EELGG+  + G+AR +MC AEVP F+ SG +  R+G  G + +T  A++ RF+ Y+ +  PW V+ +E LHGLTFA MW A T  A  IAP  L TT+QG+VS               G +Y   GA   F ++    S SL+LL++    RW
Sbjct:  240 APQQAALIEILHVMTKDAYTTIFFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYAFMSNPWLVVASEPLHGLTFAVMWTAATRQAFAIAPQGLGTTMQGIVSGLHFGLGSGMGALVGGFVYESKGAFSTFMLAVGTASSSLVLLLIAEWTRW 437
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BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: D7G0X7_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 5.110e-33
Identity = 56/75 (74.67%), Postives = 68/75 (90.67%), Query Frame = 2 
Query:  779 MCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1003
            MC++EVPFFY+SGPLIR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP
Sbjct:    1 MCLSEVPFFYVSGPLIRKIGPRNVVALSQIGYIVRLVYYSVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5)

HSP 1 Score: 146 bits (368), Expect = 1.610e-32
Identity = 73/186 (39.25%), Postives = 110/186 (59.14%), Query Frame = 2 
Query:  623 AVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXGLLYAGLGASRCFAVSAALPSLSLLLLVLPTA 1180
            A+R+++    +  FF  + ++G G GVI+TFLFI +++LGGS  + G  R + C++EVP F+ SG ++ ++GV G + LT V Y+ RF  YS++R PW V+ +E LHG+TFA MWA +T+YA  IAP  L  T+QG++                G +Y   GA   F VSA +   + + LV   A
Sbjct:  501 ALRVIVQDANTMMFFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYSLMRSPWLVVASEPLHGVTFAIMWATSTKYAADIAPPGLGATMQGILGGLHFGLGQGLGALIGGAIYDVHGARFTFRVSAGMAGAAFVFLVASEA 686
[Close]
BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 3.120e-32
Identity = 67/154 (43.51%), Postives = 98/154 (63.64%), Query Frame = 2 
Query:  662 FFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXGLLYAGLGASRCF 1123
            FF+ + +SG+G G+I+TFLF+RL ELG +  + G++RL+MC+ E+PFF+ +  L+ R GV GV+ + Q AY  RF +YSVL+ PW V+  EVLHG+T+ A+W  ++ +AH IAPA L  T Q +V                G+LY  +GA   F
Sbjct:  262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSVLQNPWNVVYVEVLHGITYGALWGTSSVFAHQIAPAGLEATAQSLVGLIHWGIGFTLGSTLGGVLYEHVGAVNTF 415
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3W1_ECTSI2.940e-26296.82MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6H4_9PHAE5.890e-19592.28MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JEM5_9PHAE5.090e-8152.24MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JI17_9PHAE3.420e-5939.71MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G4M5_ECTSI2.170e-4863.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0X9_ECTSI5.880e-4054.42MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A9VAW9_MONBE4.190e-3839.90Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
D7G0X7_ECTSI5.110e-3374.67MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
F2U1L1_SALR51.610e-3239.25MFS domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A7S0ZL95_9RHOD3.120e-3243.51Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:20286..25858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score680.2
Seed ortholog evalue6.7e-193
Seed eggNOG ortholog2880.D7G3W1
Model size2458
KEGG koko:K11367
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.MFS_1 like family
EggNOG OGsKOG3762@1,KOG3762@2759
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-00_007140.4
EC3.6.4.12
Cds size1413
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17484.1prot_Ecto-sp6_S_contig83.17484.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig83 20386..24913 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350461.3695047-UTR-Ecto-sp6_S_contig83:20285..203851682350461.3695047-UTR-Ecto-sp6_S_contig83:20285..20385Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 20286..20385 +
1682350461.4562256-UTR-Ecto-sp6_S_contig83:24913..258581682350461.4562256-UTR-Ecto-sp6_S_contig83:24913..25858Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig83 24914..25858 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350461.3831258-CDS-Ecto-sp6_S_contig83:20385..204741682350461.3831258-CDS-Ecto-sp6_S_contig83:20385..20474Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 20386..20474 +
1682350461.404076-CDS-Ecto-sp6_S_contig83:21125..216621682350461.404076-CDS-Ecto-sp6_S_contig83:21125..21662Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 21126..21662 +
1682350461.4162097-CDS-Ecto-sp6_S_contig83:22273..224451682350461.4162097-CDS-Ecto-sp6_S_contig83:22273..22445Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 22274..22445 +
1682350461.4272318-CDS-Ecto-sp6_S_contig83:23370..234761682350461.4272318-CDS-Ecto-sp6_S_contig83:23370..23476Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 23371..23476 +
1682350461.4376614-CDS-Ecto-sp6_S_contig83:23983..243031682350461.4376614-CDS-Ecto-sp6_S_contig83:23983..24303Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 23984..24303 +
1682350461.447065-CDS-Ecto-sp6_S_contig83:24724..249131682350461.447065-CDS-Ecto-sp6_S_contig83:24724..24913Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig83 24725..24913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig83.17484.1

>prot_Ecto-sp6_S_contig83.17484.1 ID=prot_Ecto-sp6_S_contig83.17484.1|Name=mRNA_Ecto-sp6_S_contig83.17484.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=471bp
MIVFVANVAVAMGASTGVPIGRRGGGTATRDKQLGGGGGGGGGGDGVATG
GDFELGEKRTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVA
TDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNG
SSGPSRGDGEGPGAKAKEQGGVLMAVRIMMYTGESASFFMAVGLSGMGAG
VIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGV
IALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIA
PAHLRTTIQGVVSGIHWGLGFGLGAVLGGLLYAGLGASRCFAVSAALPSL
SLLLLVLPTAKRWISGTDARDGRPGAKFMPPRSRRRCWGGCCGGGGDDGR
SSYELVAKEVQANSPNDRNGYCCDDDVDADGGGNSIDKTDNSSNNGSDSG
EDVSSDDSDLEAQQRKATAV*
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mRNA from alignment at Ecto-sp6_S_contig83:20286..25858+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig83.17484.1 ID=mRNA_Ecto-sp6_S_contig83.17484.1|Name=mRNA_Ecto-sp6_S_contig83.17484.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5573bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:20286..25858+ (Ectocarpus species6 EcLAC_371)
ATACGGCAATCTTCGGCTGTGGGGTGCGATTGGTTTCGGGATCGCCTCGC
TCATCGGGGGCTACGTGTGCGACTCCTACGGCGGCAGCTACACCGGGGTC
ATGATCGTGTTCGTCGCGAATGTCGCGGTGGCAATGGGGGCGTCGACCGG
CGTTCCCATCGGGCGACGAGGGGGCGGAACCGCCACCCGGTGAGAACCGC
AAGCAGGGCGAGTTTCATGCTGCGTTTTGTGGATGGTGTGCTTGCTGCTT
ATGGGCCGGTCCCTTGTGAGGTGCGTCAGGATAAGTTGCGTTTCCTGTCG
GGAACAGTGTTGTTTTGCCAAGCGCTGCGTTGAGTGGCAAGGTGTGCATC
GAGACGATCGAGTGGCACGCGCTGCTGCTGTTGACAAGAGGTGTGGCTGA
GGAGAGGGAAGCACCCCGGTGCAGCAGCAGAGCCGTCGAATGGTGTTACA
TCTTTGTAGATCTGCGCGCTATGCAGTGCCCAACGGCCGACCGAACCCAC
GGTGGCGTGAAGCGCTCAAGACCACTGTCACGAGCGTCGAGTCAGGGCAC
AAGGAGACATCCGCGCGCGCGCGTTTTGACCCTCCTACGGGTGCCCACGA
AGGAGCGCGTGTCTCTTCGCCCCCGCCTGAAGCGTTGAAATTGTCCGTGC
CTTTCGATATCTCACGGCTCTGCGACCTTGCGCTCGCATCCCACTACAAC
CTACAACGTCTGCGCAATGTGGCCTGACGGGTTGATAACTTCGCCGGGAC
TGTTTGTTTTGTCTTCACCGATGAATCAATGATGATGATGATGATGATGT
CCGTGCATCTGGTTTCCGTGTCCCCCTGAACCAAACCCAGAGACAAGCAG
CTTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGGCGTCGCTACAGG
AGGAGACTTCGAGCTCGGCGAAAAGAGGACGGAGAGTCCCGTGTCTCCTC
GGACCTCATCCCGAGGCTGCGCTGTTGCTCGTGACAAGACGGAGGGAGAA
CCGGAGTGCGGCGGTCTCATCGGAACTGCCGCCGTGACCCCAGCAGTGGC
CACCGATACCGCCGCCACCGCTGATGATATTAAGCTCCATCTCCGCGACG
ACGACGAGCCCGAAGGCAACGACGAAGCCCAAACGCACGCCGCCTTGCTG
TCCCGCCCTAGGACGACCTCGGACAAGGACGGGGGCGGCGACAATAACGG
CAGCAGCGGCCCCAGCAGAGGTGATGGTGAGGGACCCGGGGCGAAGGCGA
AAGAGCAGGGGGGTGTGCTCATGGCCGTCCGGATCATGATGTACACGGGA
GAGAGCGCTTCCTTTTTCATGGCAGTGGGGCTCAGCGGCATGGGAGCGGG
CGTGATCGACACGTTTCTCTTCATTAGGTGATGGCGGAGAAATTACCGAC
GTTGTGGAGCAATTGTTTGCTCTTGTTCGTGGGGATCGTGCGTTCGTTGA
CTGAAAAAGCCTCTTGTTGGTGGTTGGTTGGTCGGAGTCTCAATAAATTT
AGCACTGCTGTACAAATAACATGGTTTTGCGTGGTGATGCTCTGATGCCC
GGGTGGTTTGTTTGAGTCGACCATGTTGTGCTCTCGCCGATTCAGTGATA
AAGCGTCGCCGACGTCGACGCATGAACCGAGTTTTCTTCTGGTTGTTTTT
ATGAGAGGCGAAACTGAAACCGAAGTTAAACACACATCACGCCGGCCGTT
CTGAGGTGGCGAACCACACGTGCAAGAGCAGCCCTCCTGTACGCATGATC
TGTGTTCGCGTTGGTATTCAAGGCAAAGCCTGCATGAACCTCGGCTCGCC
CATTTTCCTCCATGCCGCACATTGCGCCGCCCTGATCCCTCCACCGGTAC
ACACTCGAGGCCCTGCATTCTGGACTGGAGTTGACCTTTGATGTAAACCT
TGACTCTGCTATAGCCCGTAGTTGCCACCCTGCTTCTACTCTGTGCTACA
ACTCCCACACAACCCCCCAACCCCATCTCCCAACCAAGGCTGGAAGAGCT
CGGGGGTTCGCACGTGCTGTGCGGGCTCGCGCGTCTTATCATGTGCATCG
CGGAAGTGCCGTTCTTCTACCTCTCGGGGCCTCTCATCAGGCGGGTCGGC
GTACGGGGAGTGATCGCCCTCACCCAGGTGGCCTACCTGACTCGCTTCAT
CTACTATTCGGTGAGCCTTGTCTTTTGTCGTCCCCCGCGTACGGTGGGCT
CGAGAGAGCTGGCGCACTCGCTATCCGCCTGGATGGAAGTTTGTCGCCTC
CGCAGGCAGTGGTGGGGGGCCCTCCCTTCCCCTTCCCTCCAATTGTTCAG
CTTTCGCTCCTTCAGAGCAGTGGCCACGTTTGTAGAGGTAGAGGGGTAGG
GTGCCTGGCGTTGTTGCGAAGTGAGTTCAGCGGGCGTTCGCGAGGTCGGT
GTGAGGCAGAAAATCGGGTGTCCTGAAACATTTTTTTGCCTCGTGCGGCC
ACCACCGCCCAGGAAGGCTCTTTCAGTGGTTCAAAGGTGTACAGGTTGCC
CAAGCACTGAAGACAAAAGGAAAATCATTTTGTTTCTTCTTGCCCTAGGG
GCACAGCAGGTCAACGGTGGATTGGACACCAAGTCGTTCACCATGAGGCA
TCCTGGGCCATGGAGGCAAAGAAAGAATACCGAGCCTTGGCTCGTACTCG
ACGCTTTACAATTTTCGTCGACCAACTACAGCGACGCATCCTTTTTTGTC
TCTCCGTTTGTCTCGTCTGCTTCCTCCTACCTCGGGAACCAAGATCCCCT
CACCCTATCTCTTCTTCCGCTTTCACAGGATTGCACAGCAATGTCTTTCC
GTCCAACGAGGGTGGTGACGACCATAGCAGCGCACTGAACCACTCTTACC
TTTTAGCACCCGTGCTGAAGTAGTGCCGAACGCGCCCATCGCATACATGC
CTTCACTTGAATCACATTCTGGCCGCCCGGTCCATTGGGGGACATGAGAC
CGACTCTGCCTGCTATTCCTGCCATGGCGGAAGGCTGTTAGTCTCTACCT
CTGTTCTGAGTTGCATGGAATTGAAGTGTCTCGTTGCCCCTGTGCTGTCC
TCTTCGGGACGAACTCGACCCTCGAACTGGCTCAGGTGCTACGAAAGCCG
TGGTGGGTCCTCCCGGCCGAGGTGCTGCACGGCCTGACCTTCGCCGCAAT
GTGGGCAGCCACCACCGAATACGCGCACGGGATCGCTCCAGGCACGTTGT
GCTGCTGCCGCTGCCAACCACAAATGCTAGTGTTCTTGTTTCTTTGTGCT
CTCTCGTCCTGCCCATGCACGCTTTTGTATTTCCTCAATCGTTGCAGTAT
ACCACGGCTGACTCCTACACTGCACTGCGAGTTTTGTCACGGCGTTGTAG
CTTTGGCTTCGGGCTGGGTGTGGTCGTGCCGACGCCGCACGTTTAGGCAA
CAAACGAAACACAACGGGTGTTGTTCTTGGACAGTCCTCATACCGAACTC
GCCCGTTCCCCATACAGAATACATGTAACCTCTCGGAAACTTTCCTCCCT
CTCGTGGACGTGGCCGACGCGATCGCGCGCAAAACACTGCCTCGCGCCCA
CGCGCGCGCCCACATATACGCCCACCACACACACCCAGCCATAAGTAGGC
ATGCGAACGCATCGCCATGACCTTTGGACTGCCTCCCATCTAAATTAACC
GTCCCTCGGTCCTTCCACGGACCTCACAAACACAAAATCCAACCACAGCT
CACTTGCGGACGACGATTCAAGGAGTCGTGTCCGGGATCCACTGGGGCCT
GGGCTTCGGGCTCGGGGCGGTGCTGGGAGGGCTCCTGTACGCAGGCCTCG
GTGCTTCTAGGTGCTTCGCCGTTAGCGCCGCTCTGCCCTCGCTGTCCCTG
CTGTTGCTGGTCCTGCCCACGGCGAAACGGTGGATCAGCGGCACCGACGC
GCGCGACGGGCGACCGGGGGCAAAATTTATGCCACCTCGTAGCAGGCGAC
GGTGCTGGGGCGGCTGCTGCGGCGGTGGTGGCGATGATGGGCGCTCTTCG
TACGAGCTCGTTGCGAAGGTCGGTGAATGAACACGATGGTGTATCGCTTG
TACTCCACAGGGCAATTTTCAGGCAATCCGGGGCTTTTTGTTCTGTAGGA
TCGGGTCTGGGGGGTAAACGGGGCGGCTGGCAACGCATTTGTAAAAGGGG
GCGTGTAGTGCGCTCGGCGGAAGGACTGGGATGACCGCAGCGCAAGACGT
TCTTCATTCAAGTGTTGTGGGTCGGCGATGAGAAAGAAACAAATCGCGGC
GGCATGCTTGGCAAATAGTTCGAAGTATATCATCAGTACCTGCCCACATG
CCGCAACCTCGCGAACAATCCCCCTTACACGTACACCAGGTGATCTCTCA
CAGCAGGACAACTGTGAAAGTAACGTTTAGTCTCAACCACTCGTTCTGCG
CCACGATACGAATTCCTCTCTCGCGTTGTGCTCCTGTAGGAGGTTCAAGC
CAACAGTCCCAACGATCGAAACGGCTACTGCTGTGACGACGACGTCGATG
CCGACGGAGGTGGGAACAGCATCGACAAGACCGATAACAGCAGCAACAAT
GGCAGCGACAGCGGCGAAGACGTCAGCAGCGACGACAGCGACCTAGAGGC
ACAGCAGCGGAAGGCAACGGCCGTGTAGACGAAACCCGCTCTGTTTTCTG
TCCCGTTACACCTCAGTACGGCGTGTGTACGATACGAGATGGATGCATTC
TACAATTTTAGAGAAAATGTTGTACTTCAGAGTAAGTAGTTTTGCCTTTT
ATTTGTTGCCGAGCGCGGAAGCGGTGTGCCAATGAGTCTTCCTGACGTCC
GCGTGAATTGATGTGCCATCTACAAGGGTCGATGGGATTACTAAGGGCGC
CGACACCAGGGGAGGGTGGAGAGTTGTGCTTGCGTCAAACACGATGTTCA
AGTGTCAAGATAAAGTATATCCATCGCGTTTAGTAGCGGAGTAACGTGCG
ATGCAACGCCGTTCCACGCGGAATAGTCCATGGTCTTTTAGAATCACGCT
GTGCTGCAACAGTTCCGCTGCGGCAAACGTATCCCCCTCACTACTGTGTA
AGCCACATCCCTGTAGACCTTCGAGCATTGACGGAGACACTTTTTTATCT
CTTGGCGTGCAGGGCCAAGAAGGTTGTTTCATGGGGCATTGATCGCCTCT
GTGCGAGTTTATGAGACCGCAAATCTTGGCAACACGAGTCAACCCCCTTA
CCTCTAACACCCTTGCCTTCAGCACAGCTGACACGGTATCCTCACGAAAT
AGTGGCTATTGGTCCACAGCCTCCAGCGGTGAACTCAGCGTCCCTAGGTA
CATTAGCGGATGTTGCCGCTGCACACACGAGACGACTCCGGTTTCTATTT
ACTGGCAAAAGATAATGGGGTTGTTAGCCATTTTCTGCGCATTCACCGTG
TGGGAGATTGTCTTGTACACGGTGGTGACTGTGATGGGACGGGGGGAGCA
ACAATACTGCTGTTCACGACGGAAACGATGGGGTACAGTAGGTGGCAGGC
GTTGGACGTCAAACGTCAGATAGATGCGGACACTAATGGAGAGGAAGGCA
GCACCTGCGGCGCAGGAGAGGTC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig83:20286..25858+

>mRNA_Ecto-sp6_S_contig83.17484.1 ID=mRNA_Ecto-sp6_S_contig83.17484.1|Name=mRNA_Ecto-sp6_S_contig83.17484.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1413bp|location=Sequence derived from alignment at Ecto-sp6_S_contig83:20286..25858+ (Ectocarpus species6 EcLAC_371)
ATGATCGTGTTCGTCGCGAATGTCGCGGTGGCAATGGGGGCGTCGACCGG
CGTTCCCATCGGGCGACGAGGGGGCGGAACCGCCACCCGAGACAAGCAGC
TTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGGCGTCGCTACAGGA
GGAGACTTCGAGCTCGGCGAAAAGAGGACGGAGAGTCCCGTGTCTCCTCG
GACCTCATCCCGAGGCTGCGCTGTTGCTCGTGACAAGACGGAGGGAGAAC
CGGAGTGCGGCGGTCTCATCGGAACTGCCGCCGTGACCCCAGCAGTGGCC
ACCGATACCGCCGCCACCGCTGATGATATTAAGCTCCATCTCCGCGACGA
CGACGAGCCCGAAGGCAACGACGAAGCCCAAACGCACGCCGCCTTGCTGT
CCCGCCCTAGGACGACCTCGGACAAGGACGGGGGCGGCGACAATAACGGC
AGCAGCGGCCCCAGCAGAGGTGATGGTGAGGGACCCGGGGCGAAGGCGAA
AGAGCAGGGGGGTGTGCTCATGGCCGTCCGGATCATGATGTACACGGGAG
AGAGCGCTTCCTTTTTCATGGCAGTGGGGCTCAGCGGCATGGGAGCGGGC
GTGATCGACACGTTTCTCTTCATTAGGCTGGAAGAGCTCGGGGGTTCGCA
CGTGCTGTGCGGGCTCGCGCGTCTTATCATGTGCATCGCGGAAGTGCCGT
TCTTCTACCTCTCGGGGCCTCTCATCAGGCGGGTCGGCGTACGGGGAGTG
ATCGCCCTCACCCAGGTGGCCTACCTGACTCGCTTCATCTACTATTCGGT
GCTACGAAAGCCGTGGTGGGTCCTCCCGGCCGAGGTGCTGCACGGCCTGA
CCTTCGCCGCAATGTGGGCAGCCACCACCGAATACGCGCACGGGATCGCT
CCAGCTCACTTGCGGACGACGATTCAAGGAGTCGTGTCCGGGATCCACTG
GGGCCTGGGCTTCGGGCTCGGGGCGGTGCTGGGAGGGCTCCTGTACGCAG
GCCTCGGTGCTTCTAGGTGCTTCGCCGTTAGCGCCGCTCTGCCCTCGCTG
TCCCTGCTGTTGCTGGTCCTGCCCACGGCGAAACGGTGGATCAGCGGCAC
CGACGCGCGCGACGGGCGACCGGGGGCAAAATTTATGCCACCTCGTAGCA
GGCGACGGTGCTGGGGCGGCTGCTGCGGCGGTGGTGGCGATGATGGGCGC
TCTTCGTACGAGCTCGTTGCGAAGGAGGTTCAAGCCAACAGTCCCAACGA
TCGAAACGGCTACTGCTGTGACGACGACGTCGATGCCGACGGAGGTGGGA
ACAGCATCGACAAGACCGATAACAGCAGCAACAATGGCAGCGACAGCGGC
GAAGACGTCAGCAGCGACGACAGCGACCTAGAGGCACAGCAGCGGAAGGC
AACGGCCGTGTAG
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