mRNA_Ecto-sp6_S_contig82.17479.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: D8LDY8_ECTSI (Phatr1_ua_kg.chr_17000030 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY8_ECTSI) HSP 1 Score: 709 bits (1830), Expect = 2.570e-256 Identity = 358/381 (93.96%), Postives = 359/381 (94.23%), Query Frame = 1
Query: 1 MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVCTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLY MFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVCTPF+RLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQ ERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ
Sbjct: 1 MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYYMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVCTPFLRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQ---------------------ERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 360
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A7R9U7Y3_9STRA (Chloride channel protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Y3_9STRA) HSP 1 Score: 437 bits (1123), Expect = 2.740e-143 Identity = 229/382 (59.95%), Postives = 272/382 (71.20%), Query Frame = 1
Query: 4 TLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVC--TPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
T VG LTGLIAV +T + + KF +Y + G + AF+ +L FNL Y +A +EPLAAGSGIPEIK +LNGI LPRVVR KTL+CK +GV F+V++GLPAGKEGPMVHSG+VVAAGISQGKSN+LG DTSF++F+DFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEG S+WSTKLTWR FFCAMMTV TLY +++ +N +G+ D MFSFGEF LE Q N+SVWEL+LFIL+G MGG GA FN N++++ WR KHV +P R+ E L V MT V F W CT KP+ EDWT Q ER LVD+LV++ CD +TEYNEVASLFL DADTAI+Q
Sbjct: 136 TFFVGVLTGLIAVAITTTARAIQENKFNHIYDMVADDGEGFFAAFMTLLTFNLIYGLIAASSAVIEPLAAGSGIPEIKCYLNGIQLPRVVRAKTLVCKAIGVTFTVSSGLPAGKEGPMVHSGAVVAAGISQGKSNILGCDTSFARFKDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGTSYWSTKLTWRTFFCAMMTVLTLYVVRNAENSFGRSDNTSMFSFGEFFSLEEDQANYSVWELFLFILLGAMGGAWGALFNFFNEKITIWRIKHVPVESPIRRIAEALAVVTFMTCVAFGCSSAWTKCTTKPIPDEDWTSQ---------------------ERELVDDLVSFGCDEDTEYNEVASLFLTDADTAIKQ 496
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A7S4J0F6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0F6_9STRA) HSP 1 Score: 400 bits (1027), Expect = 3.090e-135 Identity = 203/339 (59.88%), Postives = 249/339 (73.45%), Query Frame = 1
Query: 133 AFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHV--CTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
AFL L + + A V+LEP++ GSGIPEIK FLNGIDLPRVVRVKTL+CKV+GV FSVAAGLP GKEGPMVHSGSVVAAGISQG++ G DTSFSKF DFRNDREKRDFVA GAAAGVA+AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM+T+ TL+A++ + WGQ ++ ++FSFGEF+ L N+S+WEL LFI++GC+GGLIGA FN N+ L+ WR K+V C R+MEV+ ++ +T V F++P++W CT P DM+DW+ Q E+ LV+ LV + C+ EYNEVASL DADTAI+Q
Sbjct: 52 AFLAYLFYQTLFAAAAAMFVYLEPVSGGSGIPEIKCFLNGIDLPRVVRVKTLICKVVGVTFSVAAGLPVGKEGPMVHSGSVVAAGISQGRTKFWGVDTSFSKFSDFRNDREKRDFVASGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMVTMGTLFAVRGFDSFWGQANMEKLFSFGEFNSLTGEGSNYSIWELLLFIIIGCLGGLIGAVFNATNEHLTIWRMKNVNICKK-RRVMEVVLISIGVTTVSFILPLIWNRCTELPTDMQDWSNQ---------------------EKNLVEALVPFRCEAGKEYNEVASLIFTDADTAIKQ 368
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A7S4S7C7_9STRA (Chloride channel protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7C7_9STRA) HSP 1 Score: 408 bits (1048), Expect = 5.910e-132 Identity = 203/338 (60.06%), Postives = 250/338 (73.96%), Query Frame = 1
Query: 133 AFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVC-TPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
AFL L + + +A+ V+LEP++ GSGIPEIK FLNGIDLPRVVRVKTL+CKV+GV FSVAAGLP GKEGPMVHSG+VVAAGISQG++ G DTSFSKF DFRNDREKRDFVACGAAAGV +AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM+T+ TL+A+++ +LWGQ D+ ++FSFGEF+ L NFS+WEL L I++GC+GGLIGA FN N+ L+ WR KH+ +P R +EV+ ++ +T + FVMP++W CT P DM+DW+ Q E+ LV+ LV + C EYNEVASL DAD AI+Q
Sbjct: 210 AFLAFLFYQTLFAGIASFFVYLEPVSGGSGIPEIKCFLNGIDLPRVVRVKTLICKVVGVTFSVAAGLPVGKEGPMVHSGAVVAAGISQGRTKFWGVDTSFSKFSDFRNDREKRDFVACGAAAGVTSAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMITLGTLFAVRNFDSLWGQADIDKLFSFGEFNSLSGEASNFSIWELLLSIIIGCLGGLIGAVFNAANEHLTIWRMKHINHSPSRRYIEVVAISIFVTIISFVMPLVWNRCTELPTDMQDWSNQ---------------------EKNLVEALVPFRCVAGKEYNEVASLIFTDADMAIKQ 526
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA) HSP 1 Score: 403 bits (1035), Expect = 1.560e-131 Identity = 203/344 (59.01%), Postives = 249/344 (72.38%), Query Frame = 1
Query: 115 GGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHV-CTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
GG +AF + + A+ V++EP++ GSGIPEIK +LNGIDLPRVVRVKTLLCKV+GV FSVA GLP GKEGPMVHSG+VVAAGISQGK+ G DTSFSKF DFRNDREKRDFVACGAAAGVA+AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM T+ TL+A+K+ WGQ D+ ++FSFGEF+ + NFS+WEL +F +GC+GGLIGA FN N+ L+ WR K V + R+ EV+ ++F ++ V F++P+LWG CT P DM+DW+ Q E+ LV+ LV + CDP EYNEVASL +ADTAI+Q
Sbjct: 67 GGNMLKAFWSFVLIQVLMCFAASIFVYIEPVSGGSGIPEIKCYLNGIDLPRVVRVKTLLCKVIGVTFSVAGGLPVGKEGPMVHSGAVVAAGISQGKTRFWGVDTSFSKFSDFRNDREKRDFVACGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMTTMMTLFALKNMDTWWGQADIGKLFSFGEFNSISGEASNFSIWELPMFACIGCLGGLIGAVFNAANEHLTIWRMKRVNFSKKRRMFEVIMISFGVSVVSFILPILWGRCTELPQDMQDWSNQ---------------------EKNLVESLVPFQCDPEKEYNEVASLIFAEADTAIKQ 389
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: B8LCA7_THAPS (Chloride channel protein (Fragment) n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8LCA7_THAPS) HSP 1 Score: 400 bits (1027), Expect = 4.680e-131 Identity = 215/386 (55.70%), Postives = 267/386 (69.17%), Query Frame = 1
Query: 1 MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTAL----HIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHV-CTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
+TL+VG L +IA ++ L ++K+ VY ++ G + FL L + + A+ V++EP+AAGSGIPE+K FLNGIDLPR+VR KTL+CKV+GV FSVAAGLP GKEGPMVHSGSVVAAGISQG++ G DTSFSKF DFRNDREKRDFVACGAAAGVA+AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM+T+ T + I++ + WGQ ++ ++FSFGEF + G NFSVWEL LFIL+GC+GGLIGA FN N+ L+ WR KHV + R++EV+ ++ ++T V FVMP+LW CT P DM+DWT Q + EL P EYNEVASLF +AD AIRQ
Sbjct: 6 LTLVVGVLQAMIATTCNMASRRLGSMKYDHVYALGGMDDYVDGNGANSPFLAFLFYQTVFALAASLFVYIEPVAAGSGIPEVKCFLNGIDLPRIVRFKTLVCKVVGVTFSVAAGLPVGKEGPMVHSGSVVAAGISQGRTKFWGVDTSFSKFSDFRNDREKRDFVACGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMITLGTAFMIRNQDSKWGQANVDKLFSFGEFTAIGEGTINFSVWELLLFILIGCLGGLIGAVFNAGNEHLTIWRMKHVNFSKKRRVVEVVVMSLIVTTVSFVMPLLWNRCTELPTDMQDWTNQEK-------------------------EL------PGKEYNEVASLFFCEADAAIRQ 360
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: K0R8R8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8R8_THAOC) HSP 1 Score: 401 bits (1030), Expect = 3.150e-130 Identity = 207/339 (61.06%), Postives = 248/339 (73.16%), Query Frame = 1
Query: 136 FLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRD--FVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHV-CTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
FL L + + A+ V++EP++ GSGIPE+K FLNGID+PR+VR KTL+CKV+GV FSVAAGLP GKEGPMVHSGSVVAAGISQG++ G DTSFSKF DFRNDREKR FVACGAAAGVA+AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM+T+ TL I++ + WG + ++FSFGEF G NFSVWEL LFIL+GC+GGLIGACFN N+ L+ WR K+V +P R++EVL ++ L+T V FVMP+LWG CT P DM+DWT Q E+ LV LV +NC P EYNEVASL+ +AD AIRQ
Sbjct: 324 FLCFLFYQTIFALCASLFVYIEPVSGGSGIPEVKCFLNGIDIPRIVRFKTLVCKVVGVTFSVAAGLPVGKEGPMVHSGSVVAAGISQGRTKFWGVDTSFSKFSDFRNDREKRGEYFVACGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMVTLGTLLGIRNQDSKWGATSVNKLFSFGEFTSYGDGTSNFSVWELLLFILIGCLGGLIGACFNAGNEHLTIWRMKNVNFSPKRRVVEVLVMSVLVTVVSFVMPLLWGRCTELPTDMQDWTNQ---------------------EKELVGNLVPFNCIPGKEYNEVASLYFCEADVAIRQ 641
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA) HSP 1 Score: 398 bits (1022), Expect = 6.080e-129 Identity = 202/382 (52.88%), Postives = 264/382 (69.11%), Query Frame = 1
Query: 1 MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVC-TPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
+T VG + ++A F ++++ + K+ +Y L+ + S AF + VA+ V++EP++ GSGIPEIK +LNGIDLPRVVR+KTL+CKV+GV FSV+ GLP GKEGPMVHSG+VVAA +SQGK+ G DTSFSKF DFRNDREKRDFVACGAAAGVA+AFGAPIGGVLFSLEEGAS+WSTKLTWRAFFCAM T+ T+ AI + WGQ ++ +FSFGEF+ + G N+S+WEL +F L+GC+GGLIGA FN N+ L+ WR K V + R++EV+ ++ ++ V F P++WG CT P DM+DW+ Q E+ LV+ LV + C+P EYNEVASL +ADTAI+Q
Sbjct: 85 LTFAVGVVQAVVATSCNFASRSMTSRKYDYIYELLNPSFVESSTAFWNFCLIQVLLCAVASMFVYIEPVSGGSGIPEIKCYLNGIDLPRVVRIKTLICKVIGVTFSVSGGLPVGKEGPMVHSGAVVAAALSQGKTTCWGVDTSFSKFSDFRNDREKRDFVACGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMTTILTIQAITNIDTWWGQTEVGRLFSFGEFNSISGGASNYSIWELPIFGLIGCLGGLIGAVFNAANEHLTIWRMKRVNHSKIRRVIEVIVISLGVSVVSFATPLIWGRCTELPQDMQDWSNQ---------------------EKNLVESLVPFQCEPGKEYNEVASLIFTEADTAIKQ 445
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A4D9D9F8_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F8_9STRA) HSP 1 Score: 400 bits (1027), Expect = 1.380e-127 Identity = 210/390 (53.85%), Postives = 273/390 (70.00%), Query Frame = 1
Query: 1 MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALH--IAGGP-SWRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHV--CTPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKP----VDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
+T + G L GL+ V +T+ T+ L+ K V L +AG +F LG NL YV +AN VW EP+AAGSGIPEIK+FLNG+ LPRVVRVKT+LCK++GV+F+V +GLPAGKEGPMVH G+VVAAG+SQG+S++ G DTSFS+ QDFRNDREKRDFV+CGAA+GVA+AFGAP+GGVLFSLEEGAS+WS+KLT+RAF CA++T FTL IK+++ WG D +MFSFG+F L+ +GN+SVWEL LF+L+GC+GGL+GA FNR N+RL+ WR + + C P + +EV+ V MT + + +P+ W CTP P + + WTEQ ER L +LV + C EYNE+ASLF D DTAI+Q
Sbjct: 230 LTALTGVLIGLLGVAMTYTTQRLVRFKLGTVTRLLQEEVAGTRLPGASFFSYLGLNLLYVLIANAAVWAEPVAAGSGIPEIKAFLNGVSLPRVVRVKTMLCKLVGVIFTVGSGLPAGKEGPMVHIGAVVAAGVSQGRSSLWGVDTSFSRMQDFRNDREKRDFVSCGAASGVASAFGAPLGGVLFSLEEGASYWSSKLTYRAFLCALLTAFTLLVIKTSEEAWGIPDATKMFSFGKFTSLKGVEGNYSVWELALFVLIGCLGGLLGAFFNRSNERLTRWRMRRLQPC-PRRQCLEVVAVCAAMTFISYFLPLCWVKCTPLPSSGAMATDGWTEQ---------------------ERALAMKLVPFRCKAGEEYNELASLFFTDPDTAIKQ 597
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO) HSP 1 Score: 395 bits (1016), Expect = 2.490e-127 Identity = 199/340 (58.53%), Postives = 248/340 (72.94%), Query Frame = 1
Query: 127 WRAFLVMLGFNLSYVTVANGLVWLEPLAAGSGIPEIKSFLNGIDLPRVVRVKTLLCKVLGVMFSVAAGLPAGKEGPMVHSGSVVAAGISQGKSNVLGFDTSFSKFQDFRNDREKRDFVACGAAAGVAAAFGAPIGGVLFSLEEGASFWSTKLTWRAFFCAMMTVFTLYAIKSTQNLWGQQDLYEMFSFGEFDELEAGQGNFSVWELWLFILVGCMGGLIGACFNRMNQRLSTWRRKHVC-TPFMRLMEVLGVTFLMTAVCFVMPMLWGVCTPKPVDMEDWTEQARTTKQGSATTHKFAHKHAQEERTLVDELVAYNCDPNTEYNEVASLFLRDADTAIRQ 1143
+ AF + + L + +A+ VW+EP++ GSGIPEIK FLNGID+PRVVR+KTL CKV+GV FSVAAGLP GKEGPMVHSGSVVAAGISQGK+ + G DTSFSKF DFRNDREKRDFVACGAAAGV +AFG+PIGGVLFSLEE +S++STKLTWRAFFCAM T+ TL+ I++ +LWGQ ++ +MFSFGEF+ + NFS+WEL LF +VGC+GGLIGA FN N+ L+ WR K V + R +EVL V+ ++ + F+MP+LWG CT P DM+DWT Q E+ LV+ LV + C P EYNEVASL ++D AI+Q
Sbjct: 194 FTAFFYFVLYQLVFAAIASVFVWIEPVSGGSGIPEIKCFLNGIDIPRVVRIKTLFCKVIGVTFSVAAGLPVGKEGPMVHSGSVVAAGISQGKTTLFGRDTSFSKFSDFRNDREKRDFVACGAAAGVCSAFGSPIGGVLFSLEEASSYFSTKLTWRAFFCAMTTLATLFWIRNFDSLWGQANIEKMFSFGEFNSISREASNFSIWELILFTMVGCLGGLIGAVFNAANEHLTIWRMKKVNKSKSRRFVEVLCVSLGVSIISFLMPVLWGRCTKLPTDMQDWTNQ---------------------EKNLVEALVPFRCVPGKEYNEVASLIFTESDIAIKQ 512 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17479.1 >prot_Ecto-sp6_S_contig82.17479.1 ID=prot_Ecto-sp6_S_contig82.17479.1|Name=mRNA_Ecto-sp6_S_contig82.17479.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=381bp MTLIVGALTGLIAVFVTFCTKTLLNVKFTPVYTALHIAGGPSWRAFLVMLback to top mRNA from alignment at Ecto-sp6_S_contig82:775692..780533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17479.1 ID=mRNA_Ecto-sp6_S_contig82.17479.1|Name=mRNA_Ecto-sp6_S_contig82.17479.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4842bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:775692..780533- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:775692..780533- >mRNA_Ecto-sp6_S_contig82.17479.1 ID=mRNA_Ecto-sp6_S_contig82.17479.1|Name=mRNA_Ecto-sp6_S_contig82.17479.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:775692..780533- (Ectocarpus species6 EcLAC_371)back to top |