mRNA_Ecto-sp6_S_contig82.17473.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE) HSP 1 Score: 684 bits (1765), Expect = 1.300e-246 Identity = 347/364 (95.33%), Postives = 350/364 (96.15%), Query Frame = 3
Query: 39 MADAASTTPLPXXXXXXXXXGIPSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPDASD 1130
MAD ASTTPL GIPSNANEGCVGPAAEEAGKAAGC CPNKTACASGKGREVDPAVAEVAERLS VKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVD+ATGEDKTESARAILREKAP+LLEL+AQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPDASD
Sbjct: 1 MADEASTTPLRPVPTAPMASGIPSNANEGCVGPAAEEAGKAAGCAGCPNKTACASGKGREVDPAVAEVAERLSGVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDKATGEDKTESARAILREKAPQLLELIAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPDASD 364
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA) HSP 1 Score: 480 bits (1236), Expect = 5.460e-166 Identity = 233/337 (69.14%), Postives = 283/337 (83.98%), Query Frame = 3
Query: 99 GIPSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVD 1109
GIP NAN+ CVGP + EAGK + C CPN++ACASG GR DPA+ +V +RL+ V+H +LVLSGKGGVGKST +CQLAF+LAA+GKQVGLLD+DICGPSVPRMLGLTG+EVHQSS+GWSPV+V+D LGVMSIGFMLP QD+AVIWRGP+KNGLI+QFLTDVDWGQLDYLVIDTPPGTSDEH+S+V+YL GC DGAVVVTTPQEVAMADVRKELSFC KTG+ VLG+VENM+ ++P++EL F D A ED+TE A+LR+ AP+LL+L F +FG+GP+GMA+ +GVPFLG +P+DPNLLKACE G +F ++Y S AA+P IV +V+
Sbjct: 9 GIPENANQNCVGPQSTEAGKVSACAGCPNQSACASGAGRTEDPALKQVTDRLAQVRHKILVLSGKGGVGKSTFACQLAFTLAAKGKQVGLLDLDICGPSVPRMLGLTGQEVHQSSTGWSPVYVSDLLGVMSIGFMLPGQDDAVIWRGPRKNGLIRQFLTDVDWGQLDYLVIDTPPGTSDEHISIVQYLKGCAADGAVVVTTPQEVAMADVRKELSFCSKTGIRVLGLVENMAASSLPLTELTFQDGA--EDRTEEVFAVLRQVAPQLLDLKVSFNPFPAFGEGPQGMAQKFGVPFLGKVPLDPNLLKACEAGGSFLSLYPNSTAARPLGLIVEKLVN 343
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA) HSP 1 Score: 454 bits (1167), Expect = 7.190e-156 Identity = 226/342 (66.08%), Postives = 270/342 (78.95%), Query Frame = 3
Query: 102 IPSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSF-GKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPDA 1124
+P+NAN GCVGP ++ AGKA+ C CPN+ ACASG ++ DP+VA+VA RL+ VKH VLVLSGKGGVGKST++CQLAF+LA+QG QVGLLD+DICGPSVPRMLGLTG+EVHQS++GWSPV+V D LGVMSIGFMLP D+AVIWRGP+KNGLIKQFLTDVDWG LDYLVIDTPPGTSDEH+S ++YL GCNVDGAV+V+T QEV++ADVRKE++FC+KT + VLGVV NM+ L PVS+L F + A G D T A A L AP LL + VF + G G GMA GVP+LG +P+DPNLL+ACEEG +F Y S AAKPF IV V+ AT A
Sbjct: 4 VPANANAGCVGPQSDAAGKASACAGCPNQAACASGAAKQTDPSVAQVAARLADVKHTVLVLSGKGGVGKSTMACQLAFALASQGHQVGLLDVDICGPSVPRMLGLTGQEVHQSAAGWSPVYVEDNLGVMSIGFMLPGSDDAVIWRGPRKNGLIKQFLTDVDWGTLDYLVIDTPPGTSDEHISTIQYLKGCNVDGAVIVSTNQEVSLADVRKEINFCKKTSIKVLGVVGNMAALKFPVSQLAFRN-AEGGDCTAEAMAALSAHAPHLLSMSVAADVFVAAEGGGAAGMAAKTGVPYLGPVPLDPNLLRACEEGRSFLEAYPMSAAAKPFAAIVDGVLKATGSA 344
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A6V1SZ98_HETAK (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SZ98_HETAK) HSP 1 Score: 444 bits (1143), Expect = 6.590e-152 Identity = 229/352 (65.06%), Postives = 271/352 (76.99%), Query Frame = 3
Query: 105 PSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSF-GKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAF--------------TTMYAESP-AAKPFVKIVGAVVDA 1112
P NANE CVGP ++ AGK C CPN+ ACASG ++ DPAV +VA+RL+ VKH +LVLSGKGGVGKST +CQLAFSLA +G QVGLLD+DICGPSVP MLGL G+EVHQS+SGWSPV+V D LGVMSIGFMLP+QD+AVIWRGP+KNGLI+QFLTDVDWG LDYLV+DTPPGTSDEH+S+V+YL G VDGAVVVTTPQEVAMADVRKELSFC KTGL V+G+VENMSGL +PV++L F DRA+GED+T +A +LR + PE+LE++A VF + G GP GMA G +LG++P+DP L A E GE T A SP AA+PF IV VV A
Sbjct: 10 PENANETCVGPQSDNAGKVDSCAGCPNQKACASGAPKQADPAVGQVADRLAQVKHKLLVLSGKGGVGKSTFACQLAFSLAKRGYQVGLLDVDICGPSVPTMLGLVGQEVHQSASGWSPVYVGDRLGVMSIGFMLPRQDDAVIWRGPRKNGLIRQFLTDVDWGHLDYLVVDTPPGTSDEHISIVQYLKGAGVDGAVVVTTPQEVAMADVRKELSFCAKTGLPVVGLVENMSGLQLPVADLRFADRASGEDRTAAALRLLRARCPEVLEMVAGCAVFPAGNGGGPAGMARRLGARYLGALPLDPRLAAAAEAGEPLAGPLLPDEDDEEGETQESAPSPPAARPFEDIVDKVVSA 361
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: W7TWQ3_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ3_9STRA) HSP 1 Score: 438 bits (1126), Expect = 4.060e-149 Identity = 219/363 (60.33%), Postives = 274/363 (75.48%), Query Frame = 3
Query: 102 IPSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQ-GKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYL-GGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATG-----------------------EDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDAT 1115
+P +ANEGCVGP +EEAGKA+ C CPN+ CASG+ R+ DPA+ V ++L+ VKH ++VLSGKGGVGK+T +CQLAF LA Q G QVGLLD+DICGPSVPR++GLTG+EVHQS++GWSPV+V D LGVMSIGFMLP D+AVIWRGP+KNGLIKQFLTDVDWG+LDYL+IDTPPGTSDEH+S+++YL GC +DGAVVVTTPQEVAMADVRKEL+FC+KTGL V+GVVENMSGL VP++ L F+++ +DKT LR+ P LL+ + Q VF +FG GP+GMA ++ VPFLG +P+DP+LL+ACEEG + +SPA IV ++V AT
Sbjct: 15 VPPDANEGCVGPTSEEAGKASTCAGCPNQKVCASGEPRQPDPALVIVQDKLAQVKHKLVVLSGKGGVGKTTFACQLAFCLAQQYGLQVGLLDVDICGPSVPRVMGLTGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIIQYLKDGCGIDGAVVVTTPQEVAMADVRKELNFCKKTGLQVVGVVENMSGLNVPLTALNFLEKPVARHSGNGAGIEETDKSMETDKPVIKDKTAEVLEALRKVDPSLLDCVVQAEVFPAFGSGPQGMAAAFEVPFLGKLPLDPDLLRACEEGVSLEEKAPQSPAVPALHTIVRSIVAAT 377
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A7S1XNV4_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNV4_9STRA) HSP 1 Score: 432 bits (1112), Expect = 3.310e-147 Identity = 219/341 (64.22%), Postives = 267/341 (78.30%), Query Frame = 3
Query: 105 PSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGR-EVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTS-FGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDATPD 1121
P+NANE CVGP++E AGKA C CPN+ ACASG GR + A+A V +RL+SVKH +LVLSGKGGVGKST SCQLAF+LAAQGK VGLLDIDICGPSVPRMLGLTG++VHQS+SGWSPV+V D LGVMSIGFMLP D+AVIWRGP+K+GLIK FLT+V WG+LDYL+IDTPPGTSDEH+S+V+YL VDGA+VVTTPQEV+MADVRKELSFC K+GL VLG+VENM+GL VP+ L F D +G D+++ L APE+L ++A VF S G R MA + V +LG++P+DP++ ++CE+GE+F ESPAA F +V VV TPD
Sbjct: 29 PANANETCVGPSSETAGKADSCAGCPNQNACASGAGRGDAAAALAPVVDRLASVKHTILVLSGKGGVGKSTFSCQLAFALAAQGKNVGLLDIDICGPSVPRMLGLTGQQVHQSASGWSPVYVADNLGVMSIGFMLPSTDDAVIWRGPRKSGLIKSFLTEVHWGELDYLIIDTPPGTSDEHISIVQYLRAIEVDGALVVTTPQEVSMADVRKELSFCAKSGLKVLGLVENMAGLRVPMRNLRFTD-PSGADRSDEITKKLEAAAPEVLSMLASVNVFQSQSGATARQMAADFDVRYLGAVPLDPSMGESCEKGESFLQANPESPAAPAFQAVVDQVVQLTPD 368
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: H3GAM5_PHYRM (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=20 Tax=Phytophthora TaxID=4783 RepID=H3GAM5_PHYRM) HSP 1 Score: 432 bits (1110), Expect = 4.690e-147 Identity = 213/330 (64.55%), Postives = 263/330 (79.70%), Query Frame = 3
Query: 105 PSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIV 1094
P+NAN+ CVGP +E+AGK GC CPN++ CASG R+ DPAV++V +RL+ VKH +LVLSGKGGVGKSTV+CQLAF+LA QG QVGLLD+DI GPSVPRMLGL G+EVHQS++GWSPV+V D LGVMSIGFMLP D+A+IWRGPKK+G+IKQFL DV WG LDYL+IDTPPGTSDEH+S+V+Y+ ++DGAVVVTTPQEVA++DVRKEL+FCRKT +NVLGVVENMSG+ P+SE+ FV A G D+T + +L+EKAPELL+ Q VF + G MA+ + VPFLG +P+D + ACEEG +F Y +S AA F KIV
Sbjct: 6 PANANDSCVGPQSEQAGKVDGCAGCPNQSLCASGAARQPDPAVSDVKQRLAGVKHKLLVLSGKGGVGKSTVACQLAFALAGQGFQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPDADDAIIWRGPKKSGIIKQFLVDVQWGDLDYLIIDTPPGTSDEHISIVQYMKEADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSEVKFVG-ADGNDETAAFMKLLQEKAPELLQHSVQMEVFPASNGGGEAMAKRFNVPFLGRLPLDNKMTGACEEGVSFLEEYPDSVAAPAFSKIV 334
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A8K1C2U6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2U6_PYTOL) HSP 1 Score: 431 bits (1108), Expect = 5.780e-147 Identity = 215/337 (63.80%), Postives = 266/337 (78.93%), Query Frame = 3
Query: 102 IPSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDA 1112
+P +AN+GCVG ++ AGKA GC CPN+ CASG+ R+ DPAV++V +RL++VKH +LVLSGKGGVGKSTV+CQLAF+LA +G QVGLLD+DI GPSVPRMLGL G EVHQS++GWSPV+V D LGVMSIGFMLP D+A+IWRGPKK+G+IKQFL DV WG LDYL+IDTPPGTSDEH+S+V+Y+ +DGAVVVTTPQEVA+ DVRKEL+FCRKT +NVLGVVENMSG+ ++E+ FV A G D+TE+ A+L+EKAP LL+L Q VF G MA+S+GVPFLG +P+D + ACEEG +F Y +S AA F +IV VV A
Sbjct: 9 VPKDANDGCVGVESDLAGKADGCAGCPNQQLCASGEARKPDPAVSDVRQRLANVKHKLLVLSGKGGVGKSTVACQLAFALAGKGYQVGLLDVDITGPSVPRMLGLMGHEVHQSAAGWSPVYVEDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGDLDYLIIDTPPGTSDEHISIVQYMKEAGLDGAVVVTTPQEVALMDVRKELNFCRKTKINVLGVVENMSGVQRGLNEVKFVG-ADGADQTEAFLAVLKEKAPHLLDLSVQMQVFPPAAGGGEAMAKSFGVPFLGRLPLDDKMTSACEEGVSFLEEYPQSIAAPAFERIVQDVVKA 344
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: T0RQD5_SAPDV (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RQD5_SAPDV) HSP 1 Score: 428 bits (1101), Expect = 5.790e-146 Identity = 210/334 (62.87%), Postives = 256/334 (76.65%), Query Frame = 3
Query: 105 PSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVV 1106
P++AN GCVG +++AGKA+GC CPN+ CASG + DP +A+V L +KH++LVLSGKGGVGKSTVSCQLAF LA G QVGLLD+DI GPSVPRMLGL+G+EVHQS+ GWSPV+V D LGVMSIGFMLP QD+A+IWRGPKK+GLIKQFLTDV WG+LDYL+IDTPPGTSDEH+S+V+Y+ +DGAVVVTTPQEVAMADVRKEL+FCRKT L +LGVVENM+G+ + ++ FV+ AT D T +LREKAPELL Q VF G MA ++ VPFLG +P+D NL +ACE+G +F Y +S AA F IV V+
Sbjct: 4 PTDANAGCVGTQSDQAGKASGCAGCPNQNLCASGATKLPDPTMAQVKNHLKDIKHIILVLSGKGGVGKSTVSCQLAFGLAGMGHQVGLLDVDITGPSVPRMLGLSGQEVHQSNDGWSPVYVDDNLGVMSIGFMLPNQDDAIIWRGPKKSGLIKQFLTDVTWGELDYLIIDTPPGTSDEHISIVQYMKETKIDGAVVVTTPQEVAMADVRKELNFCRKTNLPILGVVENMAGIQQTLDQVKFVNPATSSDDTAHFLQVLREKAPELLPYAVQLQVFPPASGGGEAMASAFNVPFLGRLPLDANLTQACEQGVSFLEAYPKSSAATAFDAIVKRVI 337
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Match: A0A3R6VDL5_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VDL5_9STRA) HSP 1 Score: 426 bits (1095), Expect = 8.820e-145 Identity = 214/337 (63.50%), Postives = 254/337 (75.37%), Query Frame = 3
Query: 105 PSNANEGCVGPAAEEAGKAAGCXXCPNKTACASGKGREVDPAVAEVAERLSSVKHVVLVLSGKGGVGKSTVSCQLAFSLAAQGKQVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDRATGEDKTESARAILREKAPELLELMAQTTVFTSFGKGPRGMAESYGVPFLGSIPMDPNLLKACEEGEAFTTMYAESPAAKPFVKIVGAVVDAT 1115
P+NAN+GCVG +EEAGKAAGC CPN++ CASG + DP VA V + LS VKH +LVLSGKGGVGKST+SCQLAF LA +G QVGLLD+DI GPSVPRMLGL G+EVHQS+ GWSPV+V D LGVMSIGFMLP D+A+IWRGPKK+GLIKQFLTDV WG LDYL+IDTPPGTSDEH+S+V+YL +DGAVVVTTPQEVAMADVRKEL+FC+KT + ++GVVENM+GL +S FVD T D T+ +L+ KAPELL + Q VF G MA + VPFLG +P+D L +ACEEG +F Y S AA F +I+ VV T
Sbjct: 23 PTNANQGCVGTQSEEAGKAAGCAGCPNQSLCASGATKLPDPTVATVKDHLSRVKHKILVLSGKGGVGKSTISCQLAFGLAQKGFQVGLLDVDITGPSVPRMLGLQGQEVHQSNEGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGLIKQFLTDVHWGDLDYLIIDTPPGTSDEHISIVQYLKDAQIDGAVVVTTPQEVAMADVRKELNFCKKTSVPIIGVVENMAGLQQDLSRCNFVDPMTSVDHTQHVLDVLKAKAPELLSMAVQLQVFPPAAGGGEAMARMFQVPFLGRLPLDQKLTQACEEGVSFLEAYPTSSAASGFQQILDQVVRNT 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17473.1 >prot_Ecto-sp6_S_contig82.17473.1 ID=prot_Ecto-sp6_S_contig82.17473.1|Name=mRNA_Ecto-sp6_S_contig82.17473.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=365bp MADAASTTPLPPIPTAPTASGIPSNANEGCVGPAAEEAGKAAGCAGCPNKback to top mRNA from alignment at Ecto-sp6_S_contig82:720289..725282- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17473.1 ID=mRNA_Ecto-sp6_S_contig82.17473.1|Name=mRNA_Ecto-sp6_S_contig82.17473.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4994bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:720289..725282- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:720289..725282- >mRNA_Ecto-sp6_S_contig82.17473.1 ID=mRNA_Ecto-sp6_S_contig82.17473.1|Name=mRNA_Ecto-sp6_S_contig82.17473.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:720289..725282- (Ectocarpus species6 EcLAC_371)back to top |