mRNA_Ecto-sp6_S_contig82.17469.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig82.17469.1
Unique NamemRNA_Ecto-sp6_S_contig82.17469.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: D8LDZ7_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ7_ECTSI)

HSP 1 Score: 940 bits (2430), Expect = 0.000e+0
Identity = 507/536 (94.59%), Postives = 507/536 (94.59%), Query Frame = 1
Query:    1 MEKEEPTLSRRDTHGPFARMGLGSKTSSKASMGGAGAEENERLHCVITEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYIVINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEEYEXXXXXXXXXXXVRDGGGSAGXXXXXXXXXXXXXXXXXXXGKRVVDMQVGHNNSANSRDTFDGYYDQRVDYSSDDEGKTLR 1608
            MEKEEPTLSRRDTHGPFARMGLGSKTSSKASMGGAGAEENERLHCVITEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFK       TPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAK              VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEEYE XXXXXXXXXX     GSA XXXXXXXXXXXXXXXXXXXGKRVVDM VGHNNSANSRDTFDGYYDQRVDYSSDDEGKTLR
Sbjct:    1 MEKEEPTLSRRDTHGPFARMGLGSKTSSKASMGGAGAEENERLHCVITEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFK-------TPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAK--------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEEYEEXXXXXXXXXXXXXXXGSAXXXXXXXXXXXXXXXXXXXXGKRVVDM-VGHNNSANSRDTFDGYYDQRVDYSSDDEGKTLR 514          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: D8LDZ8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ8_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 3.340e-193
Identity = 295/470 (62.77%), Postives = 353/470 (75.11%), Query Frame = 1
Query:  118 NERLHCVI---TEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQ-----------DILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYIV------------------------------------------------INRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEG 1341
            NER+  +I   +E+DAAI+AL++EV+RL+ EL   T+V KREHPLEP+IHLVD++G G  G HMGRTAS+ATATAL  L P RK DE AQ+++ MF         PK+HA YLTS +FA+D++RLC     ++E EPRC+F+QSPVYVFGDIHGNLEDL+FF+DNIWKLGMNLTAGKFLFLGDYVDRG+ GLECLAYLF+LK+ENPDK+FMLRGNHELRDVNGWVE+Y E+SFLWQCQ+RFGD LGE+VWE CNAVFDR+PLA+VID DIFCVHGGIPRPL  S+SR+Q           DI+ VP VAGVCPPN+ ETFESQQVASDCLWSDPA+ +QE ++  +GFGESLRGGGAICFGAKAIDDFLAQG+LSYIV                                                INRS +YKNRY+HRRDSLSLA ++LD+++KL +IGVVT+   +G
Sbjct:   22 NERVEVLIGLISERDAAISALEYEVRRLTIELQKQTKVVKREHPLEPLIHLVDDKGVGGRGSHMGRTASVATATALRGLGPSRKGDETAQKMLAMFT-------NPKEHADYLTSPRFAKDLMRLCKGVSHLYEAEPRCVFLQSPVYVFGDIHGNLEDLHFFADNIWKLGMNLTAGKFLFLGDYVDRGLLGLECLAYLFSLKLENPDKLFMLRGNHELRDVNGWVEYYREKSFLWQCQNRFGDSLGEDVWEACNAVFDRMPLAAVIDRDIFCVHGGIPRPLDGSSSRIQARGTVGDKPNEDIMSVPQVAGVCPPNDLETFESQQVASDCLWSDPAKGDQEDAIGPSGFGESLRGGGAICFGAKAIDDFLAQGDLSYIVRAHEAHSEGVSLSKGAKVFTVFSTSKDHGQGRGAMCGCILVNHDKLQVINRSVRYKNRYVHRRDSLSLANITLDEKEKLAKIGVVTDSYDDG 484          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: D8LDX7_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX7_ECTSI)

HSP 1 Score: 558 bits (1438), Expect = 2.380e-182
Identity = 285/476 (59.87%), Postives = 337/476 (70.80%), Query Frame = 1
Query:   79 SSKASMGGAGAEENERLHCVITEKDAAITALQFEVQRLSNELAS--HTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYIV------------------------------------------------INRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDD 1356
            SS +S  G   E  + L  V+ +K+ A+ ALQ EV+RL+ EL S     V K  HPLEPVIHLV +  +      +GR  SMATA+AL  L P ++ D MA+++ +MFK       TP  HA +LTS +FA D++++C R  PIFE EPR + +QSPVYVFGDIHGNLEDLNFF+DN+WKLGMN+TAGKFLFLGDYVDRGM GLECLAYLF+LKIENPDK+FMLRGNHELRDVNGW+EHYGERSFLWQCQ+RFG+ LGE+VWE CNAVFDRLPLA VID DIFCVHGGIPRPL  STSR+QDI+CVP VA VCPPNE ETFESQQVASDC+WSDPA+D QE++L+ +GFGESLRGGGAICFG KAIDDFL QGNLSYIV                                                INRS KYKN+Y+HRRDS+SLA L+L +      +G+V    SE   +D+
Sbjct:    2 SSSSSQEGRQQERLQELEGVLDDKEQAVLALQKEVKRLTRELTSGGSGEVQKSAHPLEPVIHLVGDSKTKHYA--IGRRVSMATASALEDLAPMQRRDSMARKMTKMFK-------TPDTHAAFLTSSRFALDLIKVCQRVAPIFEAEPRAVLLQSPVYVFGDIHGNLEDLNFFADNMWKLGMNVTAGKFLFLGDYVDRGMQGLECLAYLFSLKIENPDKMFMLRGNHELRDVNGWIEHYGERSFLWQCQNRFGEALGEKVWESCNAVFDRLPLAGVIDQDIFCVHGGIPRPLEGSTSRIQDIMCVPPVASVCPPNECETFESQQVASDCMWSDPAKDEQELALEDSGFGESLRGGGAICFGTKAIDDFLTQGNLSYIVRAHEAHSEGVSLSKGAKVFTVFSTSKDHGQGKGATCGCILVDYYRLLVINRSVKYKNKYVHRRDSMSLANLTLQELQAQVDLGLVVQPDSEDESDDE 468          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: A0A6V1NP81_HETAK (Serine/threonine-protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP81_HETAK)

HSP 1 Score: 551 bits (1419), Expect = 8.060e-180
Identity = 275/461 (59.65%), Postives = 335/461 (72.67%), Query Frame = 1
Query:  124 RLHCVITEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYIV------------------------------------------------INRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEE 1362
            RLH ++ EKDAAI ALQ E+ R+SNE+ S T +A+R+HP+ PVIH+V+E GS      MGR AS+AT+  L ++ P +K+DE+  R+I MFKA       P D+  YL S +FARD+LRL  RA PI ENEPRC+F+QSP YVFGDIHGNLEDLNFFSDNIWKLGM LTAGKFLFLGDYVDRGMSGLEC+AYL ALKI+NP+K+++LRGNHELRDVNGW EHYGERSFLWQC+DRFG+++G  VWE  N VFDRLPLA+VIDHD+FCVHGG+PRP+P ST+R+QDIL VPSVAGV PPNE ETFE+QQVASDCLWSDPAR +QE  LD TGFGESLRGGGAICFG KAI+DFL Q  LS++V                                                INRS +YKN+++H+R+S+SLA LS    D   ++G++ +  +    +DD+E
Sbjct:    9 RLHAMLAEKDAAIAALQQEIHRISNEVQSKTGIARRDHPMTPVIHVVEEGGSTVQN-RMGRHASVATSNVLQNI-PSKKNDELTPRMISMFKA-------PLDYVDYLKSARFARDLLRLAKRACPILENEPRCVFLQSPCYVFGDIHGNLEDLNFFSDNIWKLGMPLTAGKFLFLGDYVDRGMSGLECVAYLLALKIQNPEKVYLLRGNHELRDVNGWEEHYGERSFLWQCRDRFGEEMGIRVWEEVNQVFDRLPLAAVIDHDVFCVHGGLPRPIPGSTNRIQDILMVPSVAGVNPPNELETFETQQVASDCLWSDPARGDQERYLDDTGFGESLRGGGAICFGQKAIEDFLEQNQLSFVVRGHEAHAEGVSLSKGARVFTVFSTSKDHGQGTKAMAGCILIDFDQIQVINRSVRYKNKFVHKRNSISLAGLSGSALDLRAKLGLIVSPENSQTEDDDDE 460          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: A0A7S4IG93_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IG93_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 7.920e-138
Identity = 249/493 (50.51%), Postives = 310/493 (62.88%), Query Frame = 1
Query:  121 ERLHCVITEKDAAITALQFEVQRLSNELAS---------HTRVAKREHPLEPVIHLVDEQGSGRPGGH---------MGRTASMATATALSSL---QPGRKHDE-MAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPES-----TSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEM-SLDA-TGFGESLRGGGAICFGAKAIDDFLAQGNLSYI------------------------------------------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEEYE 1368
            ++   ++ E+DA I AL+ EV  L+N+L+S         H    +R HPL P  +LV EQ S     H         MGR AS+ATA  L++L   Q  R     +A+R+ +MFK        P  H  Y+ S +FARD+L++ A+  PIFE+EPR  F+QSP YVFGDIHGNLEDL+FFSDN+W+LGM LTAG F+FLGD+VDRGM  LEC+AYLFA+K+  P K+F+LRGNHE RDVNGW EHYGERSF++QC++RFGDDLG  VWE  N VFDRLPLA+VID DIFCVHGGIPRP+ E+      SR+QD+L VP VAG+ PP E+E    QQVASDC+WSDPA + QE   +D  TGFGESLRGGGAICFG KA+ DFL Q   SYI                                                VINRS  Y+N+YIHRRDS+S+A LS  +  +  R+G++T    EG  EDD E+E
Sbjct:   34 DKARSLLKERDAQIAALEKEVTLLTNKLSSLATGKHQHGHAGGKRRHHPLTPYGNLVTEQESKCGAKHRQLKQMRERMGRNASIATAAILNALPDDQESRSSTHALAERITQMFK-------DPASHMDYMNSEQFARDLLKINAKVKPIFESEPRVAFLQSPAYVFGDIHGNLEDLHFFSDNVWRLGMALTAGNFVFLGDFVDRGMQCLECVAYLFAMKLLLPHKVFLLRGNHETRDVNGWEEHYGERSFIYQCRERFGDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHGGIPRPVTETEDGKPASRIQDVLNVPKVAGINPPYEHEDEAYQQVASDCIWSDPASEEQEAHGVDPDTGFGESLRGGGAICFGHKAVTDFLQQHGFSYIMRAHEAHAEGVAVSKGARVFTVFSTSKDHNQGSQAMAGCILVDFEKMQVINRSPAYRNQYIHRRDSVSIAMLSDQEIKQRMRLGLITADPGEGDDEDDGEFE 519          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: A0A1Z5JT78_FISSO (Serine/threonine-protein phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT78_FISSO)

HSP 1 Score: 417 bits (1072), Expect = 1.850e-127
Identity = 217/416 (52.16%), Postives = 272/416 (65.38%), Query Frame = 1
Query:  298 MGRTASMATATALSSL-------QPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMSL--DATGFGESLRGGGAICFGAKAIDDFLAQGNLSYI------------------------------------------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVT----NHASEGVPEDDEE 1362
            MGRTAS+AT   L S+       +P + H  + QR++ MF         P  H  YL S  F +D+L++ ++A  +FE EPR +FIQSPVYVFGDIHGNLEDL+FFSDNIW+LGM+LTAG FLFLGDYVDRG+S LE +AYL A+K+  P K+F+LRGNHE RDVNGW EHYGER+F+WQC+ RFGDD+G  +WE CN VFDRLPLA+VID DIFCVHGGIPRP+   T+R+QDIL V  VAG+ PP E+E  E QQVASDC+WSDPA + QE+      TG+G+SLRGGGAICFG KA+ DFL Q + SYI                                                VINRS  YKN+Y+HRRDS+SLA LS  +  +   +G+VT    ++++    +DD+E
Sbjct:   85 MGRTASIATRQVLDSIAAMQQSSKPYQDHPSV-QRILEMFS-------NPSQHMEYLNSSVFCKDLLKVASKARHVFEREPRVVFIQSPVYVFGDIHGNLEDLHFFSDNIWRLGMSLTAGNFLFLGDYVDRGLSCLETVAYLLAMKVCLPHKVFLLRGNHETRDVNGWEEHYGERAFIWQCRQRFGDDIGYRIWEACNQVFDRLPLAAVIDQDIFCVHGGIPRPISRDTTRIQDILTVTKVAGINPPYEHEQDEYQQVASDCIWSDPASEEQEIRSVNPETGYGDSLRGGGAICFGNKAVTDFLQQQDFSYIMRAHEAHAEGVAVSKGARVFTVFSTSQDHNQGQDAMAGCILVDNDQLQVINRSPAYKNQYVHRRDSVSLATLSEKEIQQRMNLGLVTAPQMDYSTYANEDDDDE 492          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: A0A7S3LD81_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD81_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 1.660e-125
Identity = 230/497 (46.28%), Postives = 304/497 (61.17%), Query Frame = 1
Query:   91 SMGGAGAEENERLHCVITEKDAAITALQFEVQRLSN--ELASHTRVAKRE----------HPLEPVIHLVDE--QGSGRPG-----GHMGRTASMATATALSSLQPGRK--HDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPES--TSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEM-SLDA-TGFGESLRGGGAICFGAKAIDDFLAQGNLSYI------------------------------------------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASE-GVPEDDE 1359
            S+G    +E   +H    E+D  + AL+ +V  LS   E+A H +  + E          HPL P    V E    + +P        +GRTAS++T   L +L       +  + QR++ MF+        P  H  YL S  F +D+L+L  +   +FE EPR +F+QSP YVFGDIHGNLEDL+FFSDN+W+LGM+LTAG FLFLGDYVDRG+  LEC+AYLFA+K++ P+K+F+LRGNHE RD+NGW EHYGERSF++QC+ RFGD  G  VWE CN  FDR+PLA VID DIFCVHGGIPRP+  +   +R+QDIL VP V+G+ PP E+E  + QQVASDC+WSDPA + QEM S+D  TGFGES RGGGAICFG KA+ +FL Q + SYI                                                VINRS  YKN+Y+HRRDS+SLAA+   + ++  ++G+VT+ + + G  +DD+
Sbjct:    5 SLGTLTEDETSLIHLGGAERDEEVEALRKQVVSLSAQLEIALHQQYPRNECRTNSTKRPYHPLSPHAFNVREVRTSTNKPTITAQREKLGRTASISTRQVLDNLPDSDVVGNPPVIQRILDMFQR-------PSSHMEYLNSELFCKDILKLAMKVKGMFEREPRVVFLQSPAYVFGDIHGNLEDLHFFSDNVWRLGMSLTAGSFLFLGDYVDRGLHCLECVAYLFAMKLQLPNKVFLLRGNHETRDINGWEEHYGERSFMYQCRKRFGDSAGYRVWEACNQAFDRMPLAGVIDQDIFCVHGGIPRPVSSNPGATRIQDILAVPKVSGINPPYEHEDDKYQQVASDCVWSDPATEEQEMTSVDPDTGFGESRRGGGAICFGNKAVSNFLQQHDFSYIMRAHEAHAEGVAVSKEARVFTVFSTSQDHNQGSQAMAGCILVDNNRLQVINRSPAYKNQYVHRRDSISLAAMPETEIEQRMKLGLVTSSSEDAGDGQDDD 494          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: K0TD91_THAOC (Serine/threonine-protein phosphatase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TD91_THAOC)

HSP 1 Score: 420 bits (1079), Expect = 3.000e-125
Identity = 235/490 (47.96%), Postives = 303/490 (61.84%), Query Frame = 1
Query:  115 ENERLHCVITEKDAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSL----QPGRKHDEMAQRVIRMFKARGC----------LLP-----TPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPESTS---RVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEM-SLDA-TGFGESLRGGGAICFGAKAIDDFLAQGNLSYI------------------------------------------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTN-HASEGVPEDDEEY 1365
            ++ER   ++ E+DA + AL+ EV  L N LA+ +R A           L+ E+        MGR AS++T   L+SL          DE+  R+  MF+   C          L P     +P +H +YL S +FARD+LRL  +   + E+EPRC+F+QSP YVFGDIHGNLEDL+FFSDN+W LGM+LTAG F+FLGDYVDRGMS LE +AYL A+K+  P K+F+LRGNHE RDVNGW EHYGERSF+ QC+DRFGDDLG  VWE  N+ FDR+PLA+VID DIFCVHGGIPRP+ + +    R++DIL V  VAG+ PP E+E  + QQVASDC+WSDPA ++QE  S+D  TG+G+SLRGGGAICFG +A+ DFLAQ   SYI                                                VINRS  Y+N+Y+HRRDS+SLA LS  +  +  ++G++T+  A      DDEEY
Sbjct:  231 DDERAKSLLRERDAKVAALEKEVVGLRNRLATLSREAGA---------LMSERS------RMGRNASISTQAVLNSLPDPSSSSNSVDELVGRINDMFRRCVCVRKSRPFASTLTPPPASFSPGEHVSYLKSDRFARDLLRLNRKVKSVLEDEPRCVFLQSPAYVFGDIHGNLEDLHFFSDNVWNLGMSLTAGNFVFLGDYVDRGMSCLEVVAYLLAMKLSLPQKVFLLRGNHETRDVNGWEEHYGERSFIHQCRDRFGDDLGFRVWEATNSTFDRMPLAAVIDQDIFCVHGGIPRPISDPSKEGGRIRDILNVTKVAGINPPYEHEDEDHQQVASDCIWSDPASEDQEARSVDRRTGYGDSLRGGGAICFGHRAVTDFLAQQGFSYIMRAHEAHAEGVAVSKGARVFTVFSTSKDHNQGSDAMAGCILVDFEKMQVINRSPAYRNQYVHRRDSVSLAMLSEQEIAERVKLGLITSDQAPASAGGDDEEY 705          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: W7UBM2_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBM2_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 4.500e-125
Identity = 224/452 (49.56%), Postives = 287/452 (63.50%), Query Frame = 1
Query:  139 ITEKDAAITALQFEVQRLSNELAS-HTRVAKREHPLEPVIHL---VDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRP--LPESTSRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQE--MSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYIV------------------------------------------------INRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTN 1326
            I +KD  I  +Q E++ L + L+   T+   R      V+ L   V+  G       + R AS+ATA ALS+  P    DE+A ++I +F+        P D   YL S +FA D+++LC R  PIFE E RCLF++SP YVFGDIHGNLEDLNFF+D++W+LG  LTAG+FLFLGDYVDRGM+GLEC+AYLFALKI +P K+FMLRGNHE RDVNGW +HYG+RSFL QC+ RFG +LGE+VWE  N VFDRLPLA VID+DIFCVHGG+PRP  + E  SRV+D+L VP VAG+ P  EYE+   QQ++SDC+WSDPA  + E    L+  GFGESLRGGGA+CFG +A+D+FLA    SYIV                                                INRS+KYKN+++HRR S + A ++    +K  R+G+V N
Sbjct:   44 IKDKDNVINDMQAEIKSLRDSLSQMRTQEGIRSPRNRKVVALSYQVEADGV-LSRARVARQASVATAQALSAF-PVESTDELASKMIDVFRK-------PLDKIDYLHSSRFAHDLIQLCERVKPIFEAEDRCLFLESPSYVFGDIHGNLEDLNFFADHLWRLGTQLTAGRFLFLGDYVDRGMNGLECVAYLFALKIISPTKLFMLRGNHETRDVNGWEDHYGDRSFLRQCRARFGRELGEQVWESVNQVFDRLPLAGVIDNDIFCVHGGLPRPSKMHEVASRVEDLLAVPRVAGISPVYEYESRVLQQLSSDCIWSDPALSDMEHGRELNELGFGESLRGGGAVCFGNRAVDNFLAVNEFSYIVRAHEAHAEGVGLSKGARVFTVFSTSKDHGQGNGAVAGCILVDHDAIRVINRSAKYKNKFVHRRQSATAAGVAPAHVEKAIRLGLVLN 486          
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Match: A0A7S2WM62_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM62_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 6.590e-123
Identity = 228/504 (45.24%), Postives = 292/504 (57.94%), Query Frame = 1
Query:  118 NERLHCVITEKDAAITALQFEVQRLSNELASHTRVAKRE----------------------------------HPLEPVIHLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHGGIPRPLPEST---SRVQDILCVPSVAGVCPPNEYETFESQQVASDCLWSDPARDNQEMS--LDATGFGESLRGGGAICFGAKAIDDFLAQGNLSYI------------------------------------------------VINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPEDDEEYE 1368
            N RL   I  +DA I +L+ EV+ L  +L     + K++                                  HPL P   +VD        GHMGR AS+ATA  L +L P  + D +A+  + ++K        P     YL S  FA D+LRLC +A  +FE E RCL+++SP +VFGD HGNLEDL+FFSDNIW+LGMNL  G+FLFLGDYVDRG+S LE + YL ALKI  P K+FMLRGNHE RDVNGW EHYG+RSF+ QC+ RFG+D GEEVWE  N VFDRLPLA+VIDH+IFC+HGGIPRPLP S    SR+  I  VP V+G+ PP ++E    +Q+AS+C+WSDPA ++QE S  L   G+G+S RGGG ICFG  AIDDFL +  LSYI                                                VI RS  Y+N+Y+HRRDS+SLAAL  ++ +   ++G++T   SE    D +EY+
Sbjct:   69 NNRLRRAIKNRDAEIASLKAEVENLKKDLVEADMLGKQQAEDLLTVKQEMEQAKKQQMLRRGSSARRLTQRKHHPLNPEASMVDPSDGTVRKGHMGRMASLATADILEAL-PIIETDILAETFVELYK-------DPTASVDYLASDSFALDILRLCEKAKHVFEAESRCLYLESPTFVFGDTHGNLEDLHFFSDNIWRLGMNLHPGRFLFLGDYVDRGLSSLEVVTYLIALKILFPHKVFMLRGNHETRDVNGWEEHYGDRSFIAQCKSRFGEDRGEEVWEELNQVFDRLPLAAVIDHEIFCIHGGIPRPLPGSAPGASRLDMICRVPPVSGINPPYDHEEEHLRQLASECIWSDPAGEDQEESGELGPDGYGDSPRGGGTICFGNLAIDDFLREHKLSYIMRAHEAHSYGVSLSKGARCFTVFSTSKDHNQGSRAICGCVLVDFDRMEVITRSPHYRNQYVHRRDSVSLAALPPNELEAREKVGLITEVPSE----DSDEYD 560          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDZ7_ECTSI0.000e+094.59Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
D8LDZ8_ECTSI3.340e-19362.77Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
D8LDX7_ECTSI2.380e-18259.87Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
A0A6V1NP81_HETAK8.060e-18059.65Serine/threonine-protein phosphatase n=1 Tax=Heter... [more]
A0A7S4IG93_9STRA7.920e-13850.51Serine/threonine-protein phosphatase n=2 Tax=Odont... [more]
A0A1Z5JT78_FISSO1.850e-12752.16Serine/threonine-protein phosphatase n=2 Tax=Fistu... [more]
A0A7S3LD81_9STRA1.660e-12546.28Serine/threonine-protein phosphatase n=2 Tax=Ampho... [more]
K0TD91_THAOC3.000e-12547.96Serine/threonine-protein phosphatase n=1 Tax=Thala... [more]
W7UBM2_9STRA4.500e-12549.56Serine/threonine-protein phosphatase n=2 Tax=Monod... [more]
A0A7S2WM62_9STRA6.590e-12345.24Serine/threonine-protein phosphatase n=1 Tax=Rhizo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:674369..686464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score950.7
Seed ortholog evalue3e-274
Seed eggNOG ortholog2880.D8LDZ7
Model size4194
KEGG koko:K01090
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0374@2759
EC3.1.3.16
Cds size1611
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350459.3774357-CDS-Ecto-sp6_S_contig82:674368..6744241682350459.3774357-CDS-Ecto-sp6_S_contig82:674368..674424Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 674369..674424 +
1682350459.3915536-CDS-Ecto-sp6_S_contig82:676608..6767261682350459.3915536-CDS-Ecto-sp6_S_contig82:676608..676726Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 676609..676726 +
1682350459.401912-CDS-Ecto-sp6_S_contig82:677168..6774141682350459.401912-CDS-Ecto-sp6_S_contig82:677168..677414Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 677169..677414 +
1682350459.4119656-CDS-Ecto-sp6_S_contig82:677782..6779411682350459.4119656-CDS-Ecto-sp6_S_contig82:677782..677941Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 677783..677941 +
1682350459.4349334-CDS-Ecto-sp6_S_contig82:678485..6786201682350459.4349334-CDS-Ecto-sp6_S_contig82:678485..678620Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 678486..678620 +
1682350459.448601-CDS-Ecto-sp6_S_contig82:678935..6790431682350459.448601-CDS-Ecto-sp6_S_contig82:678935..679043Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 678936..679043 +
1682350459.4589612-CDS-Ecto-sp6_S_contig82:679501..6796541682350459.4589612-CDS-Ecto-sp6_S_contig82:679501..679654Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 679502..679654 +
1682350459.4684865-CDS-Ecto-sp6_S_contig82:680283..6804001682350459.4684865-CDS-Ecto-sp6_S_contig82:680283..680400Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 680284..680400 +
1682350459.4791532-CDS-Ecto-sp6_S_contig82:680777..6808911682350459.4791532-CDS-Ecto-sp6_S_contig82:680777..680891Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 680778..680891 +
1682350459.488608-CDS-Ecto-sp6_S_contig82:681373..6814661682350459.488608-CDS-Ecto-sp6_S_contig82:681373..681466Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 681374..681466 +
1682350459.5003462-CDS-Ecto-sp6_S_contig82:682288..6823811682350459.5003462-CDS-Ecto-sp6_S_contig82:682288..682381Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 682289..682381 +
1682350459.5095334-CDS-Ecto-sp6_S_contig82:682956..6830701682350459.5095334-CDS-Ecto-sp6_S_contig82:682956..683070Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 682957..683070 +
1682350459.5170553-CDS-Ecto-sp6_S_contig82:683776..6838811682350459.5170553-CDS-Ecto-sp6_S_contig82:683776..683881Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 683777..683881 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350459.524792-UTR-Ecto-sp6_S_contig82:683881..6864641682350459.524792-UTR-Ecto-sp6_S_contig82:683881..686464Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig82 683882..686464 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17469.1prot_Ecto-sp6_S_contig82.17469.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig82 674369..683881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig82.17469.1

>prot_Ecto-sp6_S_contig82.17469.1 ID=prot_Ecto-sp6_S_contig82.17469.1|Name=mRNA_Ecto-sp6_S_contig82.17469.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=537bp
MEKEEPTLSRRDTHGPFARMGLGSKTSSKASMGGAGAEENERLHCVITEK
DAAITALQFEVQRLSNELASHTRVAKREHPLEPVIHLVDEQGSGRPGGHM
GRTASMATATALSSLQPGRKHDEMAQRVIRMFKARGCLLPTPKDHATYLT
SVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSD
NIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRG
NHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLAS
VIDHDIFCVHGGIPRPLPESTSRVQDILCVPSVAGVCPPNEYETFESQQV
ASDCLWSDPARDNQEMSLDATGFGESLRGGGAICFGAKAIDDFLAQGNLS
YIVINRSSKYKNRYIHRRDSLSLAALSLDDRDKLTRIGVVTNHASEGVPE
DDEEYEEDEDDEEEEDEVRDGGGSAGSGAAGQDSGKEGGNGEGANGKRVV
DMQVGHNNSANSRDTFDGYYDQRVDYSSDDEGKTLR*
back to top

mRNA from alignment at Ecto-sp6_S_contig82:674369..686464+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig82.17469.1 ID=mRNA_Ecto-sp6_S_contig82.17469.1|Name=mRNA_Ecto-sp6_S_contig82.17469.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12096bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:674369..686464+ (Ectocarpus species6 EcLAC_371)
ATGGAGAAGGAGGAACCTACACTGAGTCGCCGAGACACACATGGACCGTT CGCAAGGTGAGGGTTTGCGCTGGACGCACTCGTTCTTGGGAGCAGGGGCG AAGCTCCCTAAAACCCATGGAACCGACAAGCGATGATAGAGCAGTCGGCC GTTGGTGACTGATCTACGGATGGCACACGCCAAAGAGGGCTCTCGCTGGT AGAGGGTAGAGCCTCTGTGACTGATTGCGCCAAGCGTGTGGGATAACCTG GCAGCGCGGTGCTAGTCAACAGGGGTGTTTTGTGCCGCCCGGATGCAATT GAGTGGAAGAAGTTGTTCCTTTTCAGTTGAGATCGTTCAAGCCGTCGCCG CACAGCAGCAGTCAACACCACCATGTATCACGGAGGTTTACACCCCGCCC CACCTGGCGCCAAACCTTAGCTCCTTTTGCTGACTCGCAGCGAGGAAACC GACCGAAGAGAGAATGCATAGGTTTTAGTGGTGGGGTCCACGTTGTTGTC ATTCCTGCCAATCAAACCCTCAACATTTTCAACTGCCAAGTTCGTAAAGT GTTCTGACTGAGGTTTCTCTTCGCTACCTGGTCTATATTGGGAGCGCTAC AGCAGTAGCGTATAGCTAGCTGTGGGTGCACGTTGGCCGCCGTTGGTCGG CTACCCCTGTACCGCTGTGAAATGCGGTGTTTCCCCATAAACCTCAAATG GCGGGCTGGTGTGTAGGAATTTCAGATTTCCTTCGAACGTTGTGGTCGCT GCCACCTACCTTCATAACGCAATATCGGCCGCAGTTTGGGACCTGCCTTG CAAGTCACAATCAGCAATAGGCCGCCCGACAACGCTATGGTATGTTGCGG TGTAGAAGTTATCTCTGACCATCAGTCGCAGCGTGCGATCACGCGAGGGA GGATTATCCACGGAAGGACGGAGGCAGTTCAATTGGTGACGGCTCTAAAG GTTTGAAGTCAGTCCCAAGTTATCTCCTCTCTGTAAGCCTCGCTCTTTCG TCTGAACTTGGTGGACTCGCGGCTGGGGTTGCGAGGGAGCTAGACAAGTA GCGGTGTGTGCCTGTGTCCTGCGTATATTGCTTCCCACAGTCAATATCCT CATGGTGCCAGCTGAAGAATTTCCATTGTTGTTTTCGTTCCCTCCTGTTG AGTATTCACTGTAGCAATAATTATTTAGCTGGTAGGTGAGAGGGGAGAGG TGCATATTAAGCAGGGGACGAAATCGATTTGCGCATTCCCAATTCCGGGA TGTTTCCTGCCATTGGCCGGTCTGGATCCTCCGTCAAAGACTGTTGCCCG CTTGCCTTCTGTCTTGACGACCCCAAAACCTCTGCGTCATCCTCAGCGAA GAAACCACCTACAGCCGTGGGTGCTACACGCCTCCGGCGACGGCTGTGGT CGTTTTTGACGGGTTCGATCAGGCGTACTGCTGTGTAGGGGGGTGTTACC TTACAGTACAGTATCGAGACGGACCTCCAGTAGTGCGTGGCCTTAGTGCT GTCGAGGACTGGCGACACTAGGGAATTATCTGCATGCTAGGCAACGCGTA TGCGTGTGCACACTCCGACTCCGTAACCGCCACCAGAGTGCGGCAAGAAA CAGGAGTAGGGTTATGGCACAAACGGCTCGCTGCAGCGAGAGGACCGGTT CTGTTCGTGGCATTTTGCAAATATGCACTGCCTTGTCCTGAAGCAGGTCC GTTCCCCTTCGGAACCCGGGAGAGCTTATTGCTTTTTTATTGGCCTCTTT GAAGGGGTGATTGTTCCTGGCCTCTCTTCGTTTCCTACATAGCAGTAGTT CGCATGCTTGGCTTGGAACAGTACCACAGAGGAGGTAAAGGATAGAAGCC CAGAGAGCACGTTTTTATGCGAAGGCCCCACCTACAACCAAAGTGCCGAA TGGAGATGTTGACACTCCGTGAATCGGACTTATACGGGAAGGAGAGCATC GCTACCACGAGTCAGTTCGCCAGGCCTATGCTGCGTCCCTTTGTTCGATC CACGAGTCAACCATGAACTGCTTTGTGCACGCGGCAGGAAGACGACCGCC GTGTTCTGATGTATACCTTGTGCGCTTTGGTGTACCAGGGTTGTAAAGGG CCGATACCTGTCCGTACTGCCAAGTGCCCCCGATAAAATGATACGATTGA GAGCGAGACGTTCAAACCATAGGGTCGAAACTAAACAGGCTTGTGATTAA CTGAACTTTCTGTACCATCCGCATCGACAACGCCGCGCAGGATGGGGTTG GGGAGCAAGACGTCGAGCAAGGCGTCCATGGGGGGGGCGGGGGCGGAGGA GAACGAGCGGCTGCACTGCGTCATCACCGAGAAGGATGCCGCCATCACGG CGTTGCAGGTTTGTGTGTCTTTCAACCTCGCCTGTTTGGCTGGGGCACCT TGAGCTTTCCTAAACGAAAGGGGAACGGCGGATGAACACAGATGTCGATG GGGGTAGGAGAAGCGAGCAATCTTCTCGTGTGGTGGTACCCAGGAGTTTA TAGTGCAGCGTGCTCCTCTGTCAACATCCAAGTGACTGGTGATTTACGTC ATGAATCGCCTGTCCCCGCGTGTGGTCTGCTTTGTTGTTGGTGTAATTCC GTGCATCACCCGCCGCTCACCGTTTCCACTACGCCCCCCGACCGTAAAAT TGACCCCGCACATCCAACTCAAGAGCTTTGACCCTAAGCCACGCGGATGC ATCCAGGTATATAGTATGGCGTCTATTTCACGTTACTTCTACACTCCAAC ACAAGCACCACAATGCCCCCCCCCTCCCCTCCCCTCCCCCTCCCTGCCAG TTCGAAGTCCAGCGGCTGAGCAACGAGCTAGCGTCGCACACCCGAGTCGC GAAGCGCGAGCACCCGCTCGAGCCGGTGATCCACCTGGTCGACGAGCAAG GATCCGGCAGGCCCGGCGGGCACATGGGGAGGACGGCTAGCATGGCCACG GCCACGGCGCTGAGCAGCCTCCAACCGGGCAGGAAGCACGATGAGATGGC CCAGCGGGTCATCCGCATGTTCAAGGCGCGTGGCTGTCTGTTGCCCGTAC ATCCTTATGTGCCTCTGTCGCTGCCATGCAGGGATCGGTCCGTGTGTTGA GCAGATGTGTTAGCGCTGCTGTGTCTTGTGTGTTTTGTTTGTCAAGTGAT TTTATGTAGTCGTGTGGCTGAGGCCCTTTGTCGGAGAGTCGTTACCCCCG TATGTGGTGCCATGATGATTGGGTGTTGTCATCGGTGTCGTCCTCGTCTT CGTAGCTGTTGCTGATGTCGTGGCCACAGTCGATCGTGACCAAGCTCCCG TGGACCGTTTATCGTACCGCCAAATTGTTCTGTTGTCTTGACTTTCTTCT CGAGTCGCATCATGCCGTTCCACACACACCCCTTTTGTGCATCTTTTTGT GGAAAAAACTGCAGACTCCTAAGGACCACGCGACCTACCTCACCTCCGTG AAATTCGCGCGAGACATGCTGAGGCTGTGCGCCAGGGCGGGACCGATCTT CGAGAATGAGCCCCGCTGCCTCTTCATCCAGTCCCCCGTTTACGTCTTCG GAGACATTCACGGGAACTTGGAGGTGAGTTCTTTTTTCACAGCAGCACCC CTTTAAACCGGCAGGCATAAGAGTGGGTTCCTGTTATAATTTTTTTTTTT GCGAGAACAGGCCCCTTTCTGCGTTCATTCTATGTTTTATCCGGAGAGGT AGCGTAGCGTACCTACCCCATGGCGGGTTCCCAGGTCATGGGCTTTCGAG GAGTCATGTTGTGTTTTCAGCCGGAGACTTGCGTCTTTTTCATTGGTCGC CGGTTAGCGCGGTCGATCCTAAGAATACAAAAACACAAACACACACACAA TTACTTTTCGAATCCCGAGGGTGGATCCTGTGGTCCAACCTCCTTGGCGG CGCCACCCTGCCGTTTCCGCCCCCCGGGCGACTCGAAAAGTGTGTTCGCT TTTTTCATCCCGTAGTTTTCAAGGAGCACGCAGACGCACAAAACAGCATT ACCCGTCGATCGACTGTCTCTACTTGCACTAGAGGACGCTCATTTTCCCC ACATGTGTATCTACTTGGACCAAAATTCGGCGTGCCGTCCAATGGGCGGT TGACGTCACCGTAACAGGACTTGAATTTCTTCTCGGACAACATCTGGAAG CTGGGGATGAACCTGACGGCCGGGAAGTTTCTGTTTCTCGGCGACTACGT CGACCGGGGAATGTCGGGGCTCGAGTGCCTCGCGTATTTGTTTGCCCTCA AGGTGCGCTGTCGTCGTCGTCACTGTCGATGTATTGTCGTCAGGTGTGTT GCGGTTGGTCTTGAGTGCATCGTCAAACTAGGACCCGCTCGGAGCAATTT TAGCTGCGGGCGCTTCACCCGCCCTTGGCTGCGACACTCACGCAGCAGGA GGCACCTACTATGATGCGCGTTGTCGTCGGTGCCTCTCATCGCCGCCAAC ACGACGTCTTCTTGTCCGTACCATGCACGGAGTCGACTATGATGAGACCA CAAACGGCCGAAATCGATCGCCCCCCTCCTTCTTCCCCCTGTTCGGCTCC TTATCCTTGTCCTTTAGATCGAAAACCCGGATAAGATCTTCATGCTGCGG GGGAACCACGAGCTGAGGGACGTAAACGGATGGGTGGAGCACTACGGGGA GAGGTCTTTCTTGTGGCAGTGCCAGGTGGGTGGGAAAGCACCCGTTGTGA GCTGCCAGTTGACTGGAGGCCGCGGCGGCGCTCGCTCCCAGTGGTCGTTT TCGTGGACGCTGTCGAAGTGTTGAATCATCAACCGTATTTGCTGTGACGC ACAAAAACGTGCGTGCGTGTATGTGTGTGTGTGTGTTTAGTATTCGTGCT CAGAGGCAACCGGCTGACCAAATGAAAAGGACGCCAATGTCAGTGCGGGT GTATGTGTGTGCGTTTGTTTTGCGAGTCTGGGGGTTTCCGAGCTTGTGTT GGTCCGTCTGTGTGGAAATCATTCGTATCTAAATGTCATTGTAGTCGACA AGTTCGACCTTCACCGGATACGTCTGCATGGGGCGTGTTGACCGAGTCTT GAGTCTTTTCTTCCCGTGCCTGTTGGATGACGGTTGCATGACGTCACGAC GACACGCGGTGTGGATGGTGATCGACGTCACAGGATCGGTTCGGGGACGA CCTTGGGGAAGAGGTCTGGGAAGGGTGCAACGCTGTTTTCGACCGCCTCC CCCTGGCCTCGGTGATCGATCACGACATCTTCTGCGTGCATGGGGGCATC CCCCGCCCGCTGCCGGAGTCGACCTCAAGAGTCCAGGTGCAATCAGCAAC ACAATACCGTAGCACCGATCAACGTGATAGTACTTTGTAGCGGCAGCGTG GCGTGGCGGGAGTGCCAGCAACACCAGTAGGGGTGTCACCTGTCACCAAC GCCACAATATGCCGATACCGACCAACACCGTTTGTGGGAGTTCCAGCAAC AAAGGGAGCAGTAGCGGTATATCACCCACGCCACAGTCAGGAAGAGCAGT TACAGCAGCAGCAGCAGCAGCAGCAGAAGCAGGTACAGCAGTGCAAGTTG CTGTTGCTTCGAGCAAGGCTAACAGAGCAGGTACATGGCGTAGTATTAGG CATGGCTATTGTATCTGTAGAAATTTAAGGAGACTGGATGATAATAACCG TTACTCCCCCAAGGGTGACGTCGCAGCCGTCAAGGTCTTGTCTCTCCCCT TCCCCTTGTGGAGGAGCTCTCTGCCCAAGCTGCGACTTCCACGAAACGCT CGATTTTTTGGGGGGATTAGATGTCGGACATGGTACGACAAAACCTGCTT GCCTTACTAAGAGGCATGCATGATTGAAGGATTCGCGGAGAGTTGGAACT TACAAGATTGCCCCCCCCCCCGCTTTTGCGTGATTTTACACCATACGCCA TGATGTGATGTGCAGGATATCCTCTGCGTGCCGTCCGTTGCTGGGGTCTG CCCGCCGAACGAGTACGAGACTTTCGAGTCCCAGCAGGTGGCGTCGGACT GCCTTTGGTCCGACCCCGCCCGGGATAACCAGGTGCGCATGTGTGGCCGT ATGTTTTGAGTGTTTTTTATAATTGGAATGGCCGATTCCGTGCAAAGGCT CAATTCCCTGATGAAAACGGAGTCAAGAACGGGCCCTACTGTGTGTTGTT GTATCGTTGTGTGACGTTATCCGTTTTGTGTGCGTGTTCGTTCTCGTTTC TCGTACAAGGATATATATATATATATATATGTGGATTTGGAGTTTCCCCT GGCAAGGTGAAGGGTCGAGGAGGCTCCTGGCTGAATCGCTGAACCAGCTG CAGGGCGCTTCTTTGTCTCCTTTCCGGCTAGTAGATCAGAAAGGGTCCGA AGGTGCATCTATGTTTTGCGGTAGTTTAACGGGATGTCAACCAACAACCA CCCCGCCAGGAGATGAGCCTGGACGCGACCGGGTTCGGGGAGAGCTTGAG GGGGGGAGGGGCTATCTGCTTCGGCGCCAAGGCCATCGACGACTTCCTGG CTCAGGGGAACCTGAGTTACATCGTGAGGGCCCACGAGGCTCACTCGGAG GGTGTTTCCTTGAGCAAGGGGGCCAAGGTGTTCACGGTGTTCTCCACGTC CAAGGACCACGGGCAGGGGAAGGGAGCTATGTGCGGCTGCATCCTCGTCG ACTTTGAGAAGCTGCTGGTGAGAGAGGGGGGGGGAGAGAGAGAGAGAGAG AGAGAGAGGCGGAGAGAGTCAGACACAGACAATGAGAAAAGAGAGACGGG CGGGGAGGGGAGGAGAGAAAATCAGACCCGAGAGAGGCAGGCCGAGACAG AGCGAAAGAGAAACTGTGTGTGTGCGTGTGTTGTACAGTGGAATCCCTTG AGAGGTATGGTTCTCGCCGACGCCCCAACGGCATGAGCTACCCATCCCTG TGCGAATGGCCTACTGCCCGTCTGGGAAGGCTCCAAGGCCCACTAGACTC AAGGTGACTGAGTGTCTTCCTTCTTTCCCCCGATGATGATGCCTCCTCTC CGCAGGTGATCAACCGGTCTTCTAAGTACAAGAACCGGTACATCCACAGG AGAGACAGCCTGTCTCTCGCGGCGCTCAGTCTAGACGACAGGGACAAGGT GAAGCTCATGGCTTGAAACTTCTTGGTGGTTGTTGTTCTTGGCTTGTGTT TTTTTGCCGTGTCTGCTGCTACTGCTGCTGTTGGTGTTGTTGTCGTTTGC TGGTGCTGCCTTGTCTGTTGTTGGGCGTGGCGTCTTGCTGTGGTGAGTTG GTTGGAGCACCCGGAGGCGGTTCACGTGGTTTTCCGGTGCCTGTGTGCTT CACCCGCCTTGGGCTCTCACCTCCGATTCTGAACCTTGTCGGCATCATAG CCACCATGCCACGTCCGTAAAGAGCTCTTGGCTCCTTGCCCCCCGATGAG CGTTGCTTCGATCTACTGCTGTACGTCGACGCGCGTTCCTTTTTGGTGCG ATGTGGACACGCTCGCACTTGCTGGCGCACCCTCTTGGGATGCTGATTTT TTTGCTGTCACGTAGTAAGCGAGCAATAGAGGGCGGTGGCTGCCAACACC GTGGCCGGGGGAACGGGAAAGCTTGTCGAGGCGGCCACACGTGCACTGTC GCCGCGTCAAGGAGCTCTCTCGCTCTCTCCGTCATGGCGTTGGTAGCCAG TGCCCTATTTTGTTGGCGCTCTACGGGCGTTTGTGAGAGGTGGTGAACGA TCGAGACGTGCACAGTGTGCTCGGCAGGCCAAGCCAGACCTTTCGATTAG TGTGAAAGGCTCACATGCGTCGGGATTTCGAGCTTCTCTCCAAGGCTTTT TTGCAACACGACACCCTGTGGTGCTGCCTTCAACGATAAATGAACCCTGC TTCAATCATCGCGTTGGTTCTCTTGCTGTCGGTTTCGGCGGCGTAACGTT TTTGACTACCATCCACGAAGCTGACGCGCATTGGGGTGGTGACAAACCAT GCCTCGGAGGGAGTTCCAGAGGACGATGAGGAGTACGAAGAGGATGAGGA TGACGAGGAAGAGGTGCGGGCGACTTTGACAGCAAGCGAGGGGCACGGTG TTGGTTTGGTTTTTCCTCTTCTCTCACGGAACTCCTCGCGGTGATTTTTT TCATCGTGGAATAGAAACCGGTGGGGGGTAGGTGAAAACGAGGCATTGAA AAGCGTCTAGCAACATCATTTCAAGCTTTTTCCCGCCGCGTGCACGACGC GGAGAAGGAACATGAGGAGAGGGAAGGGATTTAGACGAAAAAGTAGTGGC GTTGCCTACTCTCGACGAGGCCGTTTGTGTTTGCGGCAAGCAGATAATGC GAGGCTTTTGCGGCGAATATGATGGGGACGCTGCCTGGGGGGGAGAGAGA GAACAGTTGGAGAGGCCGTGAAGGCCACATTGCGGTGCTGTTTTCACACC TCACACCAATGTTTTCAAACATCTGTCTGTAGTTTCTCCAAGACATACCA ACGTGGCCACACACGGTGCTCGCTTATGGAGTGCATGACGACGATGCAGG TCGGTCGCTTGCGCAGGCAGCACCACAGAGTTGTTCACCGCTACCAACCC TTGCGCATATACCGCCGCTTCTTTGATTCGTCGACCAGGAGGATGAGGTG CGAGACGGAGGGGGGTCCGCGGGATCAGGGGCGGCGGGGCAGGACAGCGG AAAAGAAGGCGGGAACGGGGAGGGCGCTAACGGAAAGCGGGTGGTTGACA TGGTGAGTTGTATTCGTCGACTTTGTTTTGTCGGCGTTGTCGAGATGCCA TGTCGTGCCTGCGTTGCATTTTCAGCCCTTTATTTTGTGAGCATGGCTTG TTAGCGTTCTGATCGCCGCGGTGCCTCTGCGTTTCGCTACCCGTGGAAGA TGGTCTGCACAGTTTTTTTTCTGGGTAGTTTGTAACACTTTTCGAAAGCG GAGGATCGTTTTTTTCAAGTGCCTTGCCGGAGGCCGTGCGTGTGCGCTGG GCAGAGTATTGCACGAAAGGGCGCTAACGCTAACGCTGCTTGTTGCTGAA AAATGGAGTGCTTTTTCCATTTCAGTTGGCGTTCTTCCTACAAACGAGAA AATCATCCCCCTGAAACGAGAGAATTTGGAGTATTCACCCGTTTCGGCTG GGTGCGATGAGGCTCAAGTCTGGCAATTCTTTGGGAGGGAGTAGAGAGCG GGGTGGTAAAGAAAACAACTGGGCTGCTCCTCACAACCTGAAAAACCCGC AATTTGAATACATCTCCGCAGGAGGCCACCTCTCATGTGCAAGTCTCATG TTCTCCACTTTTTCATTTGTTTGCTTCATGAAAACTGACCTTGGTGTACA AGTCTCGTGTTGTTTGTTCCCGCATTGTATGCGAAAATCGTCTTCCATAC CCAAGTCTCGTGCTATTCTTACGTCCCTTGTTTTGTATGCGAAAATCGAC CCGAACAGCAGGTGGGCCACAACAACTCGGCGAACTCACGCGACACCTTC GACGGCTACTACGACCAGCGGGTGGACTACTCGAGCGACGACGAGGGCAA AACGCTCCGATGAATCTGCTTGTTGGATGCGACCGGGTGGTCTCACCTTT CGAGATACCCTTTTTTTCGTGTTTTCCTCTCTTTGTACATCATTTCCCAG TATTTTTTCCTCTTGCCATGGATGACCGCCTGGTTTGATGGTTTTTCCTG CGGGTTGCTGTAGCTCTCGAGGGCGGTGTAGTGAAGGAGTGTCTCCACAA TACCCCCGCGAATTGTTTATTTTCAATGATTTGTCAATCTTCGCTTCGGT TCGAACGGCATGATCGTAGCACCGTCAAAGAAGGATGGTAGCAACATCGT TGATGTGGGCTTTCAGCGATTGGTCAATGCTTCTGTTTAAGGACAGAATG ATGATACGAGTAGCACATCAATGAAGGATGCATGGTGCTTCGATGATTGG TCGATCCTTCTCTTCGTATTGAACGGAATAATGTTGGCACCATCCATGAA TGACGTTCTTCCAATGATTGGTCAATTTTCGATGATTGGTCTATTCTTCC CTCCGGCGATTGGTCTATCTCCTCTTCGCATTCAACCGAAGCATGGTAGC ACCATCAATTTAGCTTGCGCGTATGCGCCCCCAGGTTGAGTGAGCATGTG CCCAACACGGCTGCCTGGTCGAAGTAGCCGCCCTTGGTGCTTACCGCTTT TTTTTTGTGCCATCGATGTGAAGCCAGTCGCCAGTCAGTGCATGGCCACC CCCAAGAGCTGATACCCTCGGTGACAGCAGACGTCTCCAGCTCGTCTGCC TTGTGTTACTCATTTGGTCCGGACTAATGGGTGGGCAGTGGTTTAGGCCA GACCACACTCGGAAAGTAAGCCCGCATTTGTTGTGGTGTTCTTCATTTCT GGGGCTACAGATTCGGAGGCCTTGCTATATGGCTTGATGTAATCGCTTGT CTTGTTTTTTTTTCGAAGCTTTTTTTGTGTTCTGACGCTGAATCGAGATA TGATGCCAATCGCCGCCTTCCAAAGTGTTCGTGAACTAATAATACTCCCT TGTTGCGCAGCAAATGCGCAGGTTATAATTGGCCCCCCGCAAAGTATGGG CGAAAGGAATCGGGGTGATTTGACGGGGAGGGGCATTGTGTGTAACGTGT GGCGCGTGCTAATCTCCTTGATTGTTTTGCAGCCTTCCTTTCGGCTTCGT TTTGTTTGTGTGTGTGTGTTTTCCCTCTTTTGATAGGGCGCACGCGAAAG ACGCGTCATAAGGTAGTGACAGGCAGAGAGGCAGGTAGACGGAGCGGGCC TGCAATGGCGCCCACCAAGATTTGGTTGCGTTGTCTTGCGCGCGTGCATG AAGGAAAGCATCGGTGGTAAATGCTGGGTTTGCGAGGCGGCTCGACGGAT ATTCGCGCACTAGGGTACACACACACACACGGGACGCCGGTTTGTCTGGC GTCCGTCAATAGAGCGAAGTAGACGTTGGGAGAGACGACGCGAAAACCGA AAACGCCGTTGATGATCGATCTTGCTGTTAGCTGTACAATCGTGCGGCTA CCTGTGTGCCCCCCTCCTCGGGTGCTCCTTTCTGTTTCTGTGGGGTGCTC GCCTGCAGCTGTTAGCTGCGATTGGAGAGCAGCTACTCCCTGTGGAGATG AGTGTGACTCACCGAGATGCCGTGTGCACTCAAGCGCGAGCTTTTTTCGC AGCAAGAGCGATGAGAGATTTTTGTGGCAACCACGGCGTTTTGTGGAGAG CAAGTCGGGGCTGCCTATCTGTCGCGAGTGGACACGGTGTTGGAAACGTG TTGAACGGGAAATGGTCTAGTGTGCCCCATCTACGCGCCTTGGATGAATG TTTGATCTTTTGCCCTTTTTGGGAAAGGGGGGGAGAAGCGGTTCTCGTGG GGCATGGGTCGGCTCGGCAAGAAGTTGGCACGGTGTTGGTGTGTAATGCT ATGAACTGTCCTTTGTTTGTTGTACCCATGGCGTAAGATTAGGAAGTGAT GTGACGCCTGTGGGCGTCCCCTGCCTTGATGGCATGTCCGACGATCCAGA GGTGGCGGTTGACCCTGGCAGCCAGGCGGTCAGTCAAAACTTCTAACCGT TGAGACAATTAGGAACTCTGGAGAACAAGCACCCTTTTGTCTATAGGGAG CATGGACATTTTTGGAAGATGTTTTGCGGTGGACTTTGAACGTTGGCGCT GCCGCGTCGGACGCAGTAGGGGCCGGGGTTGTCCATTGTGCTGAAACGAC ATTTTCTTGTAGAAAAGGTGCTGCATTCCTCAATAGCGGGCAAGGCGACC GGCGTGCTCAGACATGGGCACGACGAGTCGTTGGTTGGAGCAGCTTGTTC TGGCAAGCGTGCCAATCCTCGATGGGCCACGTGACGGCTGTGGGTCTGTG TGCATTAGTTGCGTTCTCGGCCGGATTCGGAGAGTTTGGGGTCGATCGGA GAGTTTGGGATCAAGAAGAGTGGTTGCTGCCGCGGTGGGCAGCTTTCGTC CACAATTTCGGTTTTTCACGCGGCGGTGTGCATACAAATTCCACCTCGTG TTGGGTGTCCTAAAATTGCTACAACTTGATTATTGTTAGACCTGTCGGTC CTTTCGTGTTGGGTAGCGATTCACCGTTGACTTCGCGGTCGGTCGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:674369..686464+

>mRNA_Ecto-sp6_S_contig82.17469.1 ID=mRNA_Ecto-sp6_S_contig82.17469.1|Name=mRNA_Ecto-sp6_S_contig82.17469.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1611bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:674369..686464+ (Ectocarpus species6 EcLAC_371)
ATGGAGAAGGAGGAACCTACACTGAGTCGCCGAGACACACATGGACCGTT
CGCAAGGATGGGGTTGGGGAGCAAGACGTCGAGCAAGGCGTCCATGGGGG
GGGCGGGGGCGGAGGAGAACGAGCGGCTGCACTGCGTCATCACCGAGAAG
GATGCCGCCATCACGGCGTTGCAGTTCGAAGTCCAGCGGCTGAGCAACGA
GCTAGCGTCGCACACCCGAGTCGCGAAGCGCGAGCACCCGCTCGAGCCGG
TGATCCACCTGGTCGACGAGCAAGGATCCGGCAGGCCCGGCGGGCACATG
GGGAGGACGGCTAGCATGGCCACGGCCACGGCGCTGAGCAGCCTCCAACC
GGGCAGGAAGCACGATGAGATGGCCCAGCGGGTCATCCGCATGTTCAAGG
CGCGTGGCTGTCTGTTGCCCACTCCTAAGGACCACGCGACCTACCTCACC
TCCGTGAAATTCGCGCGAGACATGCTGAGGCTGTGCGCCAGGGCGGGACC
GATCTTCGAGAATGAGCCCCGCTGCCTCTTCATCCAGTCCCCCGTTTACG
TCTTCGGAGACATTCACGGGAACTTGGAGGACTTGAATTTCTTCTCGGAC
AACATCTGGAAGCTGGGGATGAACCTGACGGCCGGGAAGTTTCTGTTTCT
CGGCGACTACGTCGACCGGGGAATGTCGGGGCTCGAGTGCCTCGCGTATT
TGTTTGCCCTCAAGATCGAAAACCCGGATAAGATCTTCATGCTGCGGGGG
AACCACGAGCTGAGGGACGTAAACGGATGGGTGGAGCACTACGGGGAGAG
GTCTTTCTTGTGGCAGTGCCAGGATCGGTTCGGGGACGACCTTGGGGAAG
AGGTCTGGGAAGGGTGCAACGCTGTTTTCGACCGCCTCCCCCTGGCCTCG
GTGATCGATCACGACATCTTCTGCGTGCATGGGGGCATCCCCCGCCCGCT
GCCGGAGTCGACCTCAAGAGTCCAGGATATCCTCTGCGTGCCGTCCGTTG
CTGGGGTCTGCCCGCCGAACGAGTACGAGACTTTCGAGTCCCAGCAGGTG
GCGTCGGACTGCCTTTGGTCCGACCCCGCCCGGGATAACCAGGAGATGAG
CCTGGACGCGACCGGGTTCGGGGAGAGCTTGAGGGGGGGAGGGGCTATCT
GCTTCGGCGCCAAGGCCATCGACGACTTCCTGGCTCAGGGGAACCTGAGT
TACATCGTGATCAACCGGTCTTCTAAGTACAAGAACCGGTACATCCACAG
GAGAGACAGCCTGTCTCTCGCGGCGCTCAGTCTAGACGACAGGGACAAGC
TGACGCGCATTGGGGTGGTGACAAACCATGCCTCGGAGGGAGTTCCAGAG
GACGATGAGGAGTACGAAGAGGATGAGGATGACGAGGAAGAGGAGGATGA
GGTGCGAGACGGAGGGGGGTCCGCGGGATCAGGGGCGGCGGGGCAGGACA
GCGGAAAAGAAGGCGGGAACGGGGAGGGCGCTAACGGAAAGCGGGTGGTT
GACATGCAGGTGGGCCACAACAACTCGGCGAACTCACGCGACACCTTCGA
CGGCTACTACGACCAGCGGGTGGACTACTCGAGCGACGACGAGGGCAAAA
CGCTCCGATGA
back to top