mRNA_Ecto-sp6_S_contig82.17453.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig82.17453.1
Unique Name	mRNA_Ecto-sp6_S_contig82.17453.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig82.17453.1 vs. uniprot
Match: D7FYI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI9_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 1.320e-117
Identity = 275/392 (70.15%), Postives = 277/392 (70.66%), Query Frame = 3

Query:  495 APLRLGPRAATDDGEEEIAHLIKKCEWCATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKVLPRKSQEFKKFYMRLKPGTRIMAWKASSXXXXXXXXXXELQISEVPWADLAGLSSIALAAGTVLERPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDGDEPSRRAVRPGWVWIQEXXXXXXXXXXXXXXXXXXXXXAERAGAGGADETGGEGKAAGAAPSSSTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SGAGVRVSPVGSGGRLGEDSPAGGNGE----------------------------ARGSSEGPPAMSDLATKDEVQQALAWKLRACDERESELNGVIARANAALEENDDRRKA 1571
            AP   GP AATDDGEEEIAHLIKKCEWCATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKV PRKSQ+FKKFYMRLKPGT                                              RPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDGDEPSRRAVRPGWVWIQE XXXXXXXXXXXXXXXXXXXX                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SGAGVRVSPVGSGGRLGEDS AGGNGE                            ARGSSEGPP+MSDLATKDEVQQALAWKLRACDERESELNGVIARANAALEENDDRRKA
Sbjct:   33 APSSRGPGAATDDGEEEIAHLIKKCEWCATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKVFPRKSQDFKKFYMRLKPGT----------------------------------------------RPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDGDEPSRRAVRPGWVWIQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRSGAGVRVSPVGSGGRLGEDSSAGGNGERKAAKPSTAKNRGGVAARVGAPPPGEEEARGSSEGPPSMSDLATKDEVQQALAWKLRACDERESELNGVIARANAALEENDDRRKA 378

[Close]

BLAST of mRNA_Ecto-sp6_S_contig82.17453.1 vs. uniprot
Match: A0A6H5KZY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY4_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.310e-105
Identity = 291/533 (54.60%), Postives = 295/533 (55.35%), Query Frame = 3

Query:  495 APLRLGPRAATDDGEEEIAHLIKKCEWCATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKVLPRKSQEFKKFYMRLKPGTRIMAWKASSXXXXXXXXXXELQISEVPWADLAGLSSIALAAGTVLERPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDGDEPSRRAVRPGWVWIQEXXXXXXXXXXXXXXXXXXXXXAERAGAGGADETGGEGKAAGAA--PSSSTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGAGVRVSPVGSGGRLGEDSPAGGNGEARGSSEGPPAMSDLATKDEVQQALAWKLRACDERESELNGVIARANAALEENDDRRKA 1571
            AP   GP  ATD+ EEEIAHLIKKC+WCA TK KLRQCFMKAHAQVLRSVRVSRDGEHFV LATGKVLPRKSQEFKKFYMRLKPGT                      ISEVPWADLAGLSSIALAAGTVLERPSPARPVA WLCVPGASNVGEE VPARGSGRAPRGPPDDGDGD DEPSRR VRPGWVWIQE XXXXXXXXXXXXXXXXXXXX                        PSSSTKR  XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                                                                            SGAGVRVSPVGSGGRLGED  A GNGEARGSSEGPP+MSDLATKDEVQQALAWKLRACDERESELNGVIA ANAALEEN+DRRKA
Sbjct:   33 APSSRGPGPATDNSEEEIAHLIKKCDWCAATKGKLRQCFMKAHAQVLRSVRVSRDGEHFVGLATGKVLPRKSQEFKKFYMRLKPGT----------------------ISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEIVPARGSGRAPRGPPDDGDGDDDEPSRRVVRPGWVWIQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSSTKRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAGGPREEGXXXXXXXXXXXXXSRRSGAGVRVSPVGSGGRLGEDDSAWGNGEARGSSEGPPSMSDLATKDEVQQALAWKLRACDERESELNGVIASANAALEENNDRRKA 543

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig82.17453.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig82.17453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYI9_ECTSI	1.320e-117	70.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KZY4_9PHAE	1.310e-105	54.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig82	contig	Ecto-sp6_S_contig82:557624..569765 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Model size	1572
Hectar predicted targeting category	other localisation
Exons	7
Cds size	1146

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig82.17453.1	prot_Ecto-sp6_S_contig82.17453.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig82 557624..567207 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350458.009764-CDS-Ecto-sp6_S_contig82:557623..557698	1682350458.009764-CDS-Ecto-sp6_S_contig82:557623..557698	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 557624..557698 -
1682350458.0193706-CDS-Ecto-sp6_S_contig82:558262..558361	1682350458.0193706-CDS-Ecto-sp6_S_contig82:558262..558361	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 558263..558361 -
1682350458.028953-CDS-Ecto-sp6_S_contig82:561198..561843	1682350458.028953-CDS-Ecto-sp6_S_contig82:561198..561843	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 561199..561843 -
1682350458.0389314-CDS-Ecto-sp6_S_contig82:562788..562950	1682350458.0389314-CDS-Ecto-sp6_S_contig82:562788..562950	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 562789..562950 -
1682350458.0488193-CDS-Ecto-sp6_S_contig82:566511..566591	1682350458.0488193-CDS-Ecto-sp6_S_contig82:566511..566591	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 566512..566591 -
1682350458.058958-CDS-Ecto-sp6_S_contig82:567122..567207	1682350458.058958-CDS-Ecto-sp6_S_contig82:567122..567207	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig82 567123..567207 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350458.067908-UTR-Ecto-sp6_S_contig82:567207..567440	1682350458.067908-UTR-Ecto-sp6_S_contig82:567207..567440	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig82 567208..567440 -
1682350458.0781033-UTR-Ecto-sp6_S_contig82:569573..569765	1682350458.0781033-UTR-Ecto-sp6_S_contig82:569573..569765	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig82 569574..569765 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig82:557624..569765-
coding sequence from alignment at Ecto-sp6_S_contig82:557624..569765-

protein sequence of mRNA_Ecto-sp6_S_contig82.17453.1

>prot_Ecto-sp6_S_contig82.17453.1 ID=prot_Ecto-sp6_S_contig82.17453.1|Name=mRNA_Ecto-sp6_S_contig82.17453.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=382bp
MTTPAQGAPRLTPLPPSPPTPPAAPLRLGPRAATDDGEEEIAHLIKKCEW
CATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKVLPRKSQEFKK
FYMRLKPGTRIMAWKASSSSSSSSSSSSELQISEVPWADLAGLSSIALAA
GTVLERPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDG
DEPSRRAVRPGWVWIQEDDDEDEDGNGGGGGGGGGAVAAERAGAGGADET
GGEGKAAGAAPSSSTKRKRSSAGGPREEGGAGGEAAAAAAKRRKSRRSGA
GVRVSPVGSGGRLGEDSPAGGNGEARGSSEGPPAMSDLATKDEVQQALAW
KLRACDERESELNGVIARANAALEENDDRRKA

mRNA from alignment at Ecto-sp6_S_contig82:557624..569765-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig82.17453.1 ID=mRNA_Ecto-sp6_S_contig82.17453.1|Name=mRNA_Ecto-sp6_S_contig82.17453.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12142bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:557624..569765- (Ectocarpus species6 EcLAC_371)
ATGGAGTCGTTCAGCCGCACTGACCGGGGAAGAGGCCCGGGAAGGGGGGC
GAATGATATGATACCACGGACCCCCCATCGGTTCACTCGTGGACCAGCTG
CTGTGCTGGTGCTGCCGTGACACAACTCGCACAGGACCGGAACACATCCT
GCGCGTGTCAAGGAATCAGGCTGCAGACTCTACGCATCAAAGGTGAGTGC
GCCGGTCACCAATCCGAACATCACGCAGGGATGAAGGAAACGGAGACCCC
AAACATATCATGTGCCAGACCTTTTGATCGCGCATCGGTGGTATCCTGCG
TATGTACGAAACGCGTGCATGTGGTGGACTAAACTTCAAATCAAGACCCA
GCACAGCTAGTGGATTGATGAGTGGGGCAATGTCTCATCCTGGAGGCTGT
TATCCTCCGACAGGGCTCAAGACCTCCACTGCCATCGGTATCATCCAGGC
TGCAGGGAGAGCTTCGGTACAGCAGCAGTGCATCCTCCTTGTCCACAGCA
GTCCTCTTCTCTTCCTGCCTCACTCATTCCGTGTAGCACTCCGTTTGTCC
CTCGTTTGCTCGCTCCTGTTCTTTCCGCAAAGAGGACTTCGAAAACGCAT
TGTGAAGACACCAATTTGCACACCTTGTAAATACCTCACTTGCTCATATG
TCCGTCGCCTTCAGCTTGCTTGACAGTAAACAGCAGCGTGAAGATGAAAT
TCGCCCAAAAGACTCATGTGCATTAGTCTAAGACTCATGTGCATTAGTCT
AACCCGGACCGACATGTTTCCTCATGAACAAGCAGTGGAGGACTTTCTCC
TTTGCTGTACTGCTGCAAGAGCTCTAGACGATACGTACATATATAACTAG
GAGCATCTACGCTTTGGAAAAGAGCTATGCATACACGAGAGAGCTGGTCT
GGCCCACGTCTCCATGTTTGTGGAGAGTGATCAAAGATGCGATTTCTTGT
AGCGCTTTACTGCTGCTGCTGCTGCTGCTGCTGTAGACAAGGTTCTCAGG
GCATTTTTACGCGGGGTTTTGTAATAGCACCAAGTCCACCCCCCTTCCCT
CGACATGTGAAAAGTCGTTGAGCCTCCTGGTAACAGCAGCATCGCAAACA
ATTTGGCTGCGCTTAGGGCGTCAGTCTGTGGGTGCGTCGGCAACACCGAG
CGGCCCTGGAAGATCGTTTCGATGTCGGGGCATGGCAGATGATGTCTCCG
CGAGCTACAAACGACGATGTCCCCGTACTTGACCGAGTAGGTCTGTGGGA
AACTCCTTTTCGCTTTATTGCAGTGTTGCAGTGGCCGGTGTATCTTACTC
GGAGGGTCAGGTTACATTCGTCATCCACCAGGATATGTATTCACATCCCA
AAGAGCGCTGAAGGTTGAACAACACAGAGCTGCCATCTCCCGACACCCAC
CACCCACATCTATGCTACTATGCTACTTCTACATGATTCAATACTTCCCG
GATGCATACTTTATCCAACATATTTACTTAATCGAAAGCACTTGCGAAGA
CTACTAAATTTTCAAAGGTTGATTTGCCGTGATCTACGGTGCGGTACCCC
CCCCCCCCCATTTCGGCGAAAGACTGTCAAAATGTTAACATCACAGCGTG
TCAGAGCTGACGCGCCCAGAGTACATATCGTGCAAGACTCACCGTGTTTG
GAACGGTTCCCAGTCATCCGTGGAATGTTCCGTAGATTTTGTCCGTTGCG
GGGACACAGAGTGCGTCAAAGACGTTTTTGTGCTTAGCACTACCGTAGCT
GGCATCACTGGTATGGCTCAGTGTAGGCTTCAACATAGGCCAAGTAATCA
GCCGGTTTTTCTTACACTCGCTTTTTAGGTGTAAAGACTTCAACACATCC
CCTTTGCCTGCTGTGGTATTTTCTCGACCGGGTATGCGTAGTCTCTCTGT
CTTTGTATGCATATGTGTACTTGTAAGAAAATGCGCTGTCAACTTTGATG
TTCCCCCCCCGGGATGATCACCCACCGGCGCAAAAAAAAAAAAAACGTCA
TTGGGACTCGTTCGTGAAGGCGCTGTCGCCCGGCGAAAAAAACGAGTGCT
TTTTTTTTTTTTGCGAAGCATGTGTCTACGCACGCAGTCCTCCCTCCGCA
CAGGAGCGCTCGGACATGGGGGTGCCGTCGGTGTTGCGCTGTGCCTCCGG
GGTCCTCTTCCCGCTTTTTCTGGAAACAGTTTGCGAGAAGATACCCGACA
ACATACTTGGTTTCAAGGACCCTCCTTCTTGAAGAACACTCCCTGACGCC
CCCCCCCCCCCCCTCCCCATCCTCTCGCCGTTCGGGCGTGCTTCGTGTCA
CCCTCCTCTCGGTTCATTTCCTCAGAACTTGGGCAAGCGAACGCCTTCTC
TTCGAAGTTGCTTCGCAGCGACGCGACGTCGTTTCCACGAAACGACTCGA
CGGCAAGGCTCCGGTTCGACCGCAACAACGCAACCCTAAATCGCCCGAAA
GCTCGGACGGGGTGGTGGTGTCTGCGAGCCGAAGAAGCGTCCTCCCTCTT
CCCGACAAAAAAAAAGCCTGACCAAGGGGCCCGATGGAGGAGACAAGGAT
TGGTGGTGATGACAACCCCGGCGCAGGGGGCACCGCGGCTGACCCCTCTT
CCCCCTTCGCCCCCTACGCCGCCGGCTGCGCCCCTTCGTCTCGGTGAGCA
GCTCTCTCGGTTTGTTTGGGCGTGTGTGTATGCGCAAAGGTCGATGGTGA
TGTTTCGTTTTTTGGTGTCCAATGGGTCCATTTTTTTTCAGGATGCGGTT
CTTGGGTAAGCTAGCCTGTGACCACGAGAATCGACCGCGTCAAGTGTTCG
ACTAGTATGGGCAGAGGAAGGTACTGGGTAGAGAGAACGGAACGGTTTTT
TCCTGTCAAGACAACAACAGAAACGACGACAACAACAACAATGTTTTTCG
GAGGAGCGTGACGCAGTCTGCGCTGTTCAGCCACCAGGCCGGAGGTTTCG
GACGGCACGTTCGCGTCGTTTTTCCCTGGGAGGGGCTTGTTGGCTGTACA
GCAGCAGAGGTCCCTGCTTGAGGCCGGTTGCCCTGTTTGAGCGCCGGGTG
CCCGATGTAAGGCCGGTGGTTGCCCTTGGACCATAGCGGCCTTCGTCGGG
TACTCCTATACACCTGCAGTCTTACCTGATCACCCCACACAAGCCGTTGT
GTTTTTCTCTCGTGTCACTCAGAGGCCCCAGAGCGGCGACGGACGATGGC
GAAGAGGAGATCGCCCACCTCATCAAGAAGTGCGAGTGGTGCGCGACCAC
GAAGGTATTGCTTGTACAGAGAGCGCCCGCGCTCGAACCTCTTATTATAG
TTTTGGCTGAGGCTGGGGTTCTTACCGTATTCCTGGGGTCATGCTACGAA
TGGTCGCTATATAGCTTTTAGTCTAAGTGTTCATCACCGAGCTTACGAAT
GGTGCTCAAGTTCTTAGGCATGGAGTTCTTTTAGGCCCAACGAAGGGTGC
CGGGAAAAATATTTTCTGACACCTATGTACGCTCCAGAGGCGCTGAGGGG
GGGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCTTTGAC
CTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTCGCCGGACC
AGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCT
CATGAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGGCATCTTGTGCTTA
CTTCCTTGCGTACGGATGACAGCTGCGTATGACTTAACTTATTTTCTGGT
GCTTTCACTTCTAGAGACAGCTGTAAGCACCGTGTAACTGCCTCGAGGAA
GCTTGACCATTTGAACACAACGTGGTGCGGCCATCCCCCTTGCGCGGAGT
GAGAGTTCTCGACCCCGCACAACATGATCTATTCGACCACCAGGCGCTGA
GGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTC
GCATCCCTACAAAGCCGGGACGGAGCATGCCGGGTCCTCACCGGACCAGG
CTCTCACATCAGCAAGCGCGAAGCGCCGTGAGGTATTTGGCGAGTCGCAT
GAAGGGTGAGCTGCATCCTGCTAAGGGTGTTCGGCATTTTGTGCTTACTT
CCTTGCGTACGGATGACAGCTACGTATGACTTAATTTATTTTCTGGTGCG
TTCACTTCTAGAGACAGGTGTAAGCACTGTGTAACTGCCTCGAGGAAGCT
TGACCATTTGAACACAACGTGGTGCGATCATCCCCCGTTGCGCGGAATGA
GGGTTCTCGACCCCGCACAACATGATCTACTCGACCACCATTCTGGTTAC
CGCCAAAAAAAAAACCGAGGTAAAAAAAACAAACGGTAACCTGGTTGCCA
AGTTCACGGAGTGAATTGGCTTGTTTTACAACGTCGTTGCCAAGCGACGA
AAACCCAATCCCGATGGCAAACACCGAGTGGGGGGCTTGTTTTACAACGT
CGTTGCCAAGCGACGAAAACCCAATCCCGATGGCAAACACCGAGTCGGGG
GCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAAACCCCGATGG
CAAACATCGGGGAAGGGGAATAAAATCAAGTATTAGTAAAGGATCCAAAC
AAGTTTTTTTTTTGCTTTTCTCGCATTTGCGGCATCACTGATTTTTTTTT
CTCATTTCGACCTCTCTAGGACGTAGGTGTCGTTCTCAGTTTTTCTGTGG
GCACTGTTGACTTAACTGTCTAGTTTTCAAGTGCGGGTGCTTTCTGTAAT
TATAACACGGCAAGCATCTCACCTCAGAAGGAGGTGGAAAAAAGAAGAAA
AACTCGTGCGTGGTCTTCCTGTGCTACCGACCGGGCTGATGCGTCCAGAA
AACAAAAAAGTCGAAAGAAAGCAGTGCGACAAGACTGGCGTCCAAAGCTA
ATGGGACGGCGCACACACACGACGACAGCCGACATCTCTTGGTTTTAGGA
GAAATAAGTAAGAACACAGAAAGACTACCCGCTCGAGATGTAACCACAGT
CGAACGGGATGTGTTGGAGTCTTAGCAGTAACTAGTCTATGTTTCCGTTG
GCTGACTAGTCCATGTTTCCGTTGGTTGCATAAGGTTGCAGCAGCCCCTG
GCCCGTCTTGCAAATCTCGACTTCTCTGCAGCGGCAGATACTGTAAGGCA
GTAGCCACGGTGCCGAAAAAATAGCGACGTTTGAACAGCAGGCTCGTCGG
GTCGGAAAGTTTCCTAAAAGTTCGGTTTTCGACAATTCGACGTTTCGACG
TTTGCATGCGCCTCGCCGTAAACGCCGTTTTCTCCCTGACGCGAACTCTA
CAGTAGATTCAGTTTTTTGCCGCTTGACGGTGAACCCTAGGTATTTTTCT
CCCTCACAATGGTCGAGCTAGTATTCTACGGTTATGTTGTGAACCATGAC
GGTAGTATTCTACTTCTCGAAGGGTTTGGGAATTGTGAATCTCCAATTTG
GAACCCATAAACGCATGTCCGTGTTAGGGGTCATCGTTTTTTTTTTTTTG
CTGGAGAAAGGAGTTGTGCATGTTCTTGTTTGTTGTTTCTTCCTAGGCAT
GACATCACGGCCCTGTATGTAGCCTACCGTACATGACACAACATAACACA
CCCCCTGGACCGATTTTCAAATGTCGATTTCTCAACAACAGATAAGAGTC
ACAGCGCCGAAAACGGTGGCGTTGAAGCTGTCTCGTCGAGAGCTTTCCGA
AAATGTATTGTTTCGTTTATGCATCCTCTTCGTCGTGGCGTAATCGAGCT
TTGAAAATTGGTCCAGGGTGTGTGTTATCTTGTGTCTTATACGGTATTTG
AAAATAGTATGAATCACGTGCAAGAATGGGGGTGCTCCTGTCGTAGGCAG
TGTGGTTTGCACTCAATTTTGCATAGCGCGAAAGCGAGGGTAACACGTGT
CGTGCTACTGCTGTATGGATGTTTGTTTTTTGTAGACATGAATACCATCA
CGAGCAAGACCGACGGTATGTACATGAGCGACAGAGATAACGTGTAGACT
CTCAAGAGTTATGTTACAAGCTCCGAACTTGTTGGATTGATTCCTGCTAG
CCGGTCCGTCGATGTATATCGCACAACGAGGATTGTGCTTCCCCCCGAAA
ATGACGATGCACTTCACGACATTCCCTATTTTTCTATTTTTTCAGCAATC
GCTGGCTCCCTTGCTCTTCGGTCTATCGTGTTTTGTCCCCTTCATGATTC
AAGTTTTTGGTTAAAAAAACATAACGAATCAGAAAATAAAATTGTTTGTT
ACCAAATTTAATATAATGGGGCGTACTCATTTGTTGCTTGCCGTAGTCAT
TTGACCATTGACCACGCGTCCCTTTCGAGACGGGGCACCGTTCCTACACC
TACTAGAGACACCACCAACATTTGGGAGCTCTTTACGTTTCTGCCACAAA
CTCCATAAAAATTTCTTGCACATCTTATCCCCGTCCTCTAGGGCCTCTTG
TGCCCACCATCTATCCCCAATTATCGCGATCGTTGTTTCGCTGTTGTCTA
ATTTACCAAACTTGTCCATGTCACACCCTCTCTGTCTCATTTCCTCCTCG
AGATCCTCTCTTTCCTTCCTGTACAACTCACACTCCCCAACTATGTGGGG
TCTACTCTCCTCCGATTTGCCACATGGATATGTGTGTCTATCCTCCTCTT
CCTCTCTCCTATTGGGGGGACGTTATGAATACCAAACCAACGTCACCCGC
TTGCCCTCGCGCAGGCCAAATTCGGGCAATGTTTCTCTAATAATGCCGGT
CCTTGCCCTCGGCCAAAACTCCGGCGAATGCTTCTCCAAACATGTCGCCC
CTTGCCGTCGCGCAGGCCAAACTCCGGCAATGCTTCATGAAGGCACACGC
GCAGGTCCTTCGCAGCGTGCGAGTTTCCCGGGACGGCGAGCACTTCGTGT
GCCTCGCCACCGGAAAGGTGTTGCCCCGGAAGAGCCAAGAGTTCAAGAAG
TTCTACATGCGGTTGAAGCCGGGGACGGTGAGCTGTTTGTTGGTGTTTTT
TTTGTGTGTTCGTGTGTGTGTGTATGTGTGTTTTTTTTCAATCGCATGCA
GAACACTAATACCTTCTGCCTGTTGCTGTTGCTGTTGCTGTTCCTGTCGT
CTTGGTTTTTTAACTCATGAAAACACTGTTACCCTCTATGATATGATGGC
TGTGGTTGTTTGTTGTGTGCCCACATGCGTGTCTTTGCACAGCTCCATGC
CCCCGCCCACCCTTGTCCTTTGTCTTGGATCTTCCTTACACACCCCTTTG
ACCAAATGGAATTTCGTCCCCCGAGAGACCGATTCCACCATACCGTACCG
GGATGCCTTTGTCTTCCGGACCGCCATACCATACCATACCATACCGTACC
GAGGTGTCGTGGTCTTCCGGTCCACCATTCTATACCGTACCAGGGTGTCT
TGGTCTTCCGGTCCACCATACCATACCGTACCGGGGTGTCTTGGTCTTCT
GGTCCACCGCAAGATACCGCACCGGAGTGGCTTGGGGTGTTCCGGCCTTT
TCATCCCCATGTCCCGGTGTTTTTCAACCGGAGTGAGCGTTTTTGCGAAA
TTTCGCACCGGAGTCTCACGCGAGACACGAAAAAAAGCCCACAGCACCAG
CAGAAGAAAACGCGCACTGCTAGCCCCCCCCCCCCCCGGTACTCTCTGCC
GCCGGCGAGGTTTCGCGTGGAACGTCAACATCGAGCCAACCATGTCAACC
AGACGGGCATGTGGTGTACCCCCCCCACCGTCCCCAAGTGCCCGAAGTAC
CCCAGGCAGTACGTAGCCTGGGCCGGCGAAAACCCGGAAGGCATATATCG
CTCGGTCCCTGAATTGTAGGGGTGCGAGGTCAATGGGCTACCATTTACGG
CATGCATTTACATGAGCACCCCCCCCCCCCCAAAATGCCTACCTGCTATC
ATACGTGTTCGCCTTGGTCCAGCGCATCATGGCGTGGAAGGCGAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGCTCCAAATCTCGGAGGTG
CCCTGGGCGGACCTGGCCGGCCTCTCCTCCATCGCCCTCGCCGCCGGCAC
TGTCCTCGAGCGGCCGAGCCCCGCCAGGCCCGTCGCGGGCTGGCTCTGCG
TCCCGGGCGCCTCGAACGTGGGCGAGGAGACAGTCCCGGCTCGGGGTAGC
GGCCGCGCACCTCGCGGGCCCCCTGATGACGGCGACGGCGACGGCGATGA
ACCTTCGCGCCGGGCCGTGCGCCCCGGCTGGGTCTGGATTCAAGAAGATG
ATGACGAGGACGAGGATGGGAACGGCGGCGGCGGCGGCGGCGGTGGCGGC
GCGGTTGCTGCTGAAAGAGCGGGAGCAGGGGGGGCGGACGAGACCGGGGG
CGAAGGAAAAGCGGCTGGAGCAGCGCCTTCATCTTCGACCAAGCGCAAGA
GGTCCTCGGCGGGAGGGCCTCGAGAGGAGGGGGGCGCGGGGGGGGAGGCA
GCGGCGGCGGCGGCGAAGCGCAGGAAGTCGCGCAGATCGGGCGCCGGAGT
GCGAGTCAGCCCTGTCGGGAGCGGCGGCAGGCTCGGCGAAGACAGTCCAG
CGGGGGGGAACGGCGAGGTAAATATATATATTTTTGCTTCTGTTGTTATC
ACTCCTGTGTTGTTTTTGTCCAGAAGTGGGTTGTTTTTTGCATGCGTTTT
TATGGTTCTCTCTTCTTTGTGTGCGACCACTCCTGTGTTGTTTGTTTAGA
CGTTGTTGTTGCTGAGCTGTGCTGCCTATAGGGGGTATACTCTCCCTGTT
GAGAGGAACCCGGCCGAGATGCTTGGAGCCGGGTTGCGAGATGAGGAGTG
CGCAAACTTGAGGTAGAGGCAGATGTTGCATGTGAGTGCCAGCAACTCGA
CCGTTTTCCCCAACACCTGGACACCAGACTGGCCCTCGTGCGTTACATAC
CTCGTTTTGTCTCTTCGCTCCTCAATCCGGACTTCACAAAAATGAGATGG
TCCTCCGTGCCTTGTACGTACCTTAGTTTGTCGCTCCACTCCTCGTTGCG
GGCTGAACAGAGAAAAGGTATAATAGCCCTCTTGCTTGTGGCTTCCCCAG
CCGTGTACCATACCGCTACTACGCTGTTTTGGGGGATGGATGTCGGCGAT
TGTCTTTTGGCGTTCTTGTTTTGTGTTTTGCTTGCTCTGCTTCTTTGCCT
GTAGAAGAGAAGACGATCTAGTGCGGGTGGCCCCCGTCGTCGACATGTTG
CCGGCCTGTCGGCCCCCGCCGCCGCCGCCCCTCGGGCCCCCAGTCCTCTC
CCGGAGAAGGGAAAAAGTTTCCGGTAAAAAAGTTGAAAACATGGTTCCTT
GTTCCGCGTACATGTTCGCACCACGTCTCCCAGAGAAGTGGGGCAAAGCC
CTCAACTGCCAAGAACCGGGGCGGAGTTGCCGCTCGGGTAGGAGGCCCCC
CCCCGAGAGAGGAAGAGGTGGGTGTATAAACCCCTTGATGGACACCCGAG
AGTTGAGCGTGTGCCTTGAGGCAGATGGGGGGGTTATCAAGGTGCGCTCC
CGCTACTCCGCAGGCGGCCCTTTTGGGGGCGGAGGTTCGAGCTTGGTGGT
GGTGGTGGTGGTGGTGGTGGTGGTGGGAGTTTCTGAGCCCTCTCTCTCTC
GAGACCGCTCCTCAACAGCTGGGGGCGTGCGCGAGAGGACCGAACGGTCA
GGAGGTCGAACGAAGTGGGCTGGTGTTCCATGTGGGGAATTTGGTGTTAC
AAACACATTTCGGTTTGGACTAAAATTTTCGGGGACAGCTCGATTGCTGC
CTGACAGCACCAACGGACGTCGGTAGTGTCTGGAGCATGCAAAGTTCTTT
CTGGTCTCTCCCTCCCTCTCTCTCCCTTTCCCTTTTTCTCTCTCTTTTAC
TCCCTGTCCGTCTCTCGTCTCTCTGTCTCTCTCTCTCCTCTCTGTCTGTT
TCTCTCTTATTTGCTTTCCCTCTACCTGTCTTTGGTCTCTGTCTCTGTCT
GCCTGTCTATATTTATATTTCCATTTCTCTCTCCCCCCCTCTCTCACACA
CACTCTACAGCAGCAACAACTTCACCTGTGAGGCTAGAGCGGATGACATC
CCATGTGCACATCTCACGCTGTGCTGCCAACACAGCAGTTTGTGTCTTTT
GTGCTGTCGTAGGCACTCGCTGGTCGCTTGGTAGTAGGAGAGGTTTGGCC
GCATCGATAACCACAGCGTTACTCGCTTTGAAGCGAGCGCAGAATTTCCT
GAGAACTTCCTTCCGACAGCAGTAGCTCGGTCTTTGTGTAGTACAGTACT
CGCCTCCACTGGAGAGTCGTTTTTTGCGCTTGAGGGTCTCTTCCTGGTTG
CTCTATGTGCATGGGGAAAACAAACTCGAATCTCGACCATGTAGGTTGAG
GTTCAAGCTTTTTTTTTTTTTTTCTTACCTGTAGCGAACAAATCAATCTC
TATCCACAGACAAGAGCCCAGGATATAATAGAGAGTAGTGGGGTTGTACT
TCGAAGGTTACAGCAGGTTTTACCCGGAGTGTGTCTCTCGCCGTAAACCA
AGTGTTCTCGAGGTGGTTGGTGCGCGGTGCAAGGTGTCTATGTCTTGATC
TTAAGCGTCCCACAGCAGTCAAGTCAGTTCACTACAGGCTCGTAAGGAAA
ACGATTGACAAGTGACGGCAGCATCGAACTTCGAACCCCCGAACTCGACA
CGTTTTTGACCACGGAAGGAGGCAAGAGGTGTGCCCGGGTACCATGCGGT
CTTTTCGGCCCGACGTATGTATGCTTCTGTCATTGCGACAACCATGGAAC
GGAATTATTCAACAGCAGTCTCCGTGTGCACTAAGCCCACAGCCGAACCT
TTTTCTTTTTTTTTTCACGAGGTCTGCGCCCACCACTATCGGTCACTGTC
GTGGACGCCAAGGTTAAGGTTGCACGTCTAGGGGAACGTTGGATGCTTCT
ACGAAAGCACCCGCACGCTCAGTGTTCACGGCAATCGGGTTGTTTTTTCG
GGGGGGGGGGGCGTGACCAAGTATGTGTGACGAACTTGATCATATATAGG
GTTAGGGGAAAAGTACCGCAATTGCATATCTATAATCTTGACCTTGGGCC
CAGATGGACATGTTCGTTCTCTTCATACAGAGCGGCACCAGTTCTTGCAA
TTGACCGAATCACGGCCACTTCATCTCGCAAAGAGATCACCCCAAGATTT
GTGCCCGTGGGCAACAAGCAGCCTGCCCCCGTAAAACAACGCGTGGGGGT
CAGTGTTTTGTAGTCTACCTAGTACTACGATGTTCATTTTTTACTGTCTA
CTTTTTTTTTCCGGCTCCCTCTCTCCGCTTGATACTTTGATATGCATACG
ACCTTTTAATTTTCCATTTTCTCCTCTTTTTTTCTTTTTTTCTTTTTGCT
CCCGCTCCTTACGCTTGCACGCTCCGTCGGTTGGCCGTGTGTGCGGCGTT
TCAGGCGAGGGGCTCAAGTGAAGGACCGCCCGCCATGTCCGACTTGGCCA
CCAAGGACGAGGTGCAGCAGGCGTTGGCGTGGAAGCTGAGGGCTTGCGAC
GAGGTCAGTACGTTACCGGCGACGCCCTTTTCTTTCCTACGGCATGTTCT
GGACGGTGTTTCGTGTGTCGTACTGTAAGCATTTCGACCCGAACTCCAAT
TGCGCACAATAAACATCAGAAGAATAAAACAAGTCTCACACTGCTGCTGT
AGGTACTGGCGCGGTGGAACTTCGAGGCGGCCGCCTTTTCGTTTGACGCC
GCACCCAAATGCAAATGAACTTGCTCTGCGCCAACCTAAATGCGAGAGAA
TCTGCACTGCGCAAATTCAACCTTACCCGCCTTTTCCCCGCGTAGATCTG
CGTACTCGGGTGTGTTTTGATTTTTACAATTTTTTGGAACCGCTGTTTTC
CTGGCAGTAGAATATCGAGGTCACCTTCCGTGACACGCCAAACCCAAATG
CGAGTGAAGTTTGCGATGCGCCGATTCAACGGCACCATCGTTGCTCTCGC
ATCGATTGTGTGATATTCGTACTTTTGTACAATCGCTCTGCGAAGACGTG
CCTCCCTGAAGATGAGCTTGCGTGTTGGTCGAACGCTTACGACGGTTCGT
TTTGCTTGTTGCCTCAGCGGGAGTCGGAGCTGAACGGCGTCATCGCAAGA
GCCAACGCTGCGCTGGAGGAGAACGACGACCGCCGGAAGGCA

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:557624..569765-

>mRNA_Ecto-sp6_S_contig82.17453.1 ID=mRNA_Ecto-sp6_S_contig82.17453.1|Name=mRNA_Ecto-sp6_S_contig82.17453.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:557624..569765- (Ectocarpus species6 EcLAC_371)
ATGACAACCCCGGCGCAGGGGGCACCGCGGCTGACCCCTCTTCCCCCTTC
GCCCCCTACGCCGCCGGCTGCGCCCCTTCGTCTCGGCCCCAGAGCGGCGA
CGGACGATGGCGAAGAGGAGATCGCCCACCTCATCAAGAAGTGCGAGTGG
TGCGCGACCACGAAGGCCAAACTCCGGCAATGCTTCATGAAGGCACACGC
GCAGGTCCTTCGCAGCGTGCGAGTTTCCCGGGACGGCGAGCACTTCGTGT
GCCTCGCCACCGGAAAGGTGTTGCCCCGGAAGAGCCAAGAGTTCAAGAAG
TTCTACATGCGGTTGAAGCCGGGGACGCGCATCATGGCGTGGAAGGCGAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGCTCCAAATCTCGG
AGGTGCCCTGGGCGGACCTGGCCGGCCTCTCCTCCATCGCCCTCGCCGCC
GGCACTGTCCTCGAGCGGCCGAGCCCCGCCAGGCCCGTCGCGGGCTGGCT
CTGCGTCCCGGGCGCCTCGAACGTGGGCGAGGAGACAGTCCCGGCTCGGG
GTAGCGGCCGCGCACCTCGCGGGCCCCCTGATGACGGCGACGGCGACGGC
GATGAACCTTCGCGCCGGGCCGTGCGCCCCGGCTGGGTCTGGATTCAAGA
AGATGATGACGAGGACGAGGATGGGAACGGCGGCGGCGGCGGCGGCGGTG
GCGGCGCGGTTGCTGCTGAAAGAGCGGGAGCAGGGGGGGCGGACGAGACC
GGGGGCGAAGGAAAAGCGGCTGGAGCAGCGCCTTCATCTTCGACCAAGCG
CAAGAGGTCCTCGGCGGGAGGGCCTCGAGAGGAGGGGGGCGCGGGGGGGG
AGGCAGCGGCGGCGGCGGCGAAGCGCAGGAAGTCGCGCAGATCGGGCGCC
GGAGTGCGAGTCAGCCCTGTCGGGAGCGGCGGCAGGCTCGGCGAAGACAG
TCCAGCGGGGGGGAACGGCGAGGCGAGGGGCTCAAGTGAAGGACCGCCCG
CCATGTCCGACTTGGCCACCAAGGACGAGGTGCAGCAGGCGTTGGCGTGG
AAGCTGAGGGCTTGCGACGAGCGGGAGTCGGAGCTGAACGGCGTCATCGC
AAGAGCCAACGCTGCGCTGGAGGAGAACGACGACCGCCGGAAGGCA