mRNA_Ecto-sp6_S_contig82.17448.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: D7FYJ3_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ3_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 1.790e-147 Identity = 206/219 (94.06%), Postives = 211/219 (96.35%), Query Frame = 3
Query: 111 KFPGCSRPCFIEPNGRVHDYCGVTHARQAQASSSPAPAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRMIAEAVGDTPPSPPPP 767
K PGCSRPCFIEPNGRVHDYCGVTH R+AQASSSPAPAATRFDGTREYVSPDLL FWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMAT SPREHKDLGRGVSGYDQ+ WDQHK+ IV +GNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQ+VRTRMIAEAVGD PPSPPPP
Sbjct: 8 KLPGCSRPCFIEPNGRVHDYCGVTHGREAQASSSPAPAATRFDGTREYVSPDLLFFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATPSPREHKDLGRGVSGYDQNVWDQHKMRIVARGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQEVRTRMIAEAVGDKPPSPPPP 226
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A1I2I2Z7_9DELT (NADAR domain-containing protein n=2 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2I2Z7_9DELT) HSP 1 Score: 213 bits (543), Expect = 4.350e-61 Identity = 99/172 (57.56%), Postives = 124/172 (72.09%), Query Frame = 3
Query: 234 FDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRMIAEAVGDTP 749
FDG++ + + ++LFWQPP+VF QWTPS FVVD V Y CAEQ+MMAEKA+LFGD ++ KI+A SPR HK LGR V+G+ QD WD+ L IV +GN AKF QN M LL TG KLL EASP DR+WG+GLRAD+P P+ WRG+NLLG+ L +VR + A D+P
Sbjct: 6 FDGSQVFETETMVLFWQPPAVFGQWTPSRFVVDGVTYGCAEQFMMAEKARLFGDEATRAKILAADSPRTHKALGRQVAGFSQDVWDRECLGIVVRGNRAKFAQNPDMRAALLATGGKLLVEASPLDRLWGVGLRADDPRIHDPNQWRGKNLLGEALMRVRAELSARLRDDSP 177
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: UPI001CCB45E4 (NADAR family protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CCB45E4) HSP 1 Score: 200 bits (508), Expect = 3.690e-56 Identity = 94/167 (56.29%), Postives = 120/167 (71.86%), Query Frame = 3
Query: 234 FDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRMIAEA 734
FDG++ + ++LFWQPP VF QWT S FVVD V Y CAEQ+MMAEKA+LFGD ++ KI+AT SPR+HK LGR V+G+ Q W++ L IV +GN AKF Q+ + LL TG+KLL EASP DR+WG+GLRAD+P S WRG+NLLG+ L +VR + A A
Sbjct: 6 FDGSQVIETETMVLFWQPPGVFGQWTSSRFVVDGVTYGCAEQFMMAEKARLFGDEATRAKILATDSPRQHKALGREVAGFVQAVWERECLEIVVRGNRAKFGQDPDLRAALLATGDKLLVEASPLDRIWGVGLRADDPRIHDTSRWRGKNLLGEALMRVRAELRAAA 172
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 205 bits (522), Expect = 3.470e-51 Identity = 98/183 (53.55%), Postives = 125/183 (68.31%), Query Frame = 3
Query: 177 VTHARQAQASSSPAPAATR-FDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRM 722
T A S + APA FD + EY +PD++ FWQPPS FSQWTPS FVVD V YSCAEQ+ AEKA+LF D+S+ Q IM +P HK GRGV G+D W+ + +IV +YAKF+QN + LL +G+K+LAEASPYD +WGIGL+ADNP A+ S WRG NLLG+ LQ+ +R+
Sbjct: 26 ATSASAEHTSGTSAPAVPAVFDPSNEYCTPDMVFFWQPPSPFSQWTPSTFVVDGVVYSCAEQFFAAEKARLFKDHSALQNIMRVSNPALHKKFGRGVCGFDPSLWEHERENIVLTASYAKFSQNSELCDHLLGSGDKILAEASPYDCIWGIGLQADNPDAQYTSRWRGLNLLGNALQRSFSRV 208
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5L3B4_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B4_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.230e-50 Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = 3
Query: 213 PAPAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWR--GQNLLGDILQKVR 713
PAPA FD EY S D+LLFW+PPSVFSQWTPS F V V+YSC EQ+MM+EKAKLFGD +S+ KIMA P+ HK LGR V +D W++ + IV G+YAKF QN M LL+TG +LLAEASP+DR WGIG+ A P A S W G+NLLG L +VR
Sbjct: 61 PAPAPP-FDDKCEYASDDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDLTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASVSSKWAASGKNLLGKALMEVR 228
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5JIZ7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ7_9PHAE) HSP 1 Score: 188 bits (477), Expect = 3.910e-50 Identity = 94/165 (56.97%), Postives = 113/165 (68.48%), Query Frame = 3
Query: 225 ATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWR--GQNLLGDILQKVR 713
A F EY S D+LLFW+PPSV SQWTPSVF V V+YSC EQYMM+EKAKLFGD +S+ KIMA P+ HK LGR V +D W++ + IV G+YAKF QN M LL+TG +LLAE+SP+DRVWGIG+ A P A S W G+NLLG L +VR
Sbjct: 64 APPFGDKCEYASDDVLLFWKPPSVSSQWTPSVFNVLGVRYSCGEQYMMSEKAKLFGDMTSYDKIMAAPDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAESSPFDRVWGIGMSACFPEASVSSKWAASGKNLLGKALMEVR 228
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5L1K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K5_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.070e-49 Identity = 98/192 (51.04%), Postives = 119/192 (61.98%), Query Frame = 3
Query: 177 VTHARQAQASSSPAPAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRMIAEAVGDTPP 752
V H Q A P T FD TREYV+ ++LFWQPPS+FSQWTPS F VD V+YSCAEQ+ A KA+ FGD IM + P HK GR V G+ Q AW++ K +IV G KF+ N M Q LL TG +LAEASP+D GIG+RAD+P A PS+W G+NLLG LQ VR + + A PP
Sbjct: 12 VGHLIQRLALDHRQPHETAFDATREYVNNIVILFWQPPSIFSQWTPSTFSVDGVEYSCAEQFFAASKARHFGDKDMLHNIMLSSDPAMHKLYGRQVRGFTQQAWEKVKAYIVLVGTLEKFSHNPAMRQYLLKTGNSILAEASPFDNTRGIGMRADHPEAANPSNWTGKNLLGKALQSVRDLLRSSASLPMPP 203
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE) HSP 1 Score: 194 bits (492), Expect = 4.220e-49 Identity = 98/169 (57.99%), Postives = 117/169 (69.23%), Query Frame = 3
Query: 213 PAPAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWR--GQNLLGDILQKVR 713
PAPA FD EY S D+LLFW+PPSVFSQWTPS F V V+YSC EQ+MM+EKAKLFGD +S+ KIMA P+ HK LGR V +D W++ + IV G+YAKF QN M LL+TG +LLAEASP+DRVWGIG+ A P A S W G+NLLG L +VR
Sbjct: 61 PAPAPP-FDDKCEYASDDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVR 228
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5KUS0_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS0_9PHAE) HSP 1 Score: 191 bits (484), Expect = 5.940e-49 Identity = 98/187 (52.41%), Postives = 125/187 (66.84%), Query Frame = 3
Query: 219 PAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSW--RGQNLLGDILQKVRTRMIAEAVG---DTPPSPPP 764
P+A FD EY S D+LLFW+PPSVFSQWTPS F V V+YSC EQ+MM+EKAKLFGD +S+ KIM P+ +K LGR V +D W++ + IV G+YAKF QN M Q L+ TG + LAEASP+D VWGIG+ A +P A S+W G+NLLG +L +VR R++ + D P SP P
Sbjct: 63 PSAPPFDDKCEYASNDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRKVRPFDYAEWERRREEIVLTGSYAKFAQNPAMKQHLMATGTRFLAEASPFDPVWGIGMAATSPEASDSSNWPNSGRNLLGKVLMEVR-RLLRDRPSSGEDLPASPFP 248
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Match: A0A6H5K4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Y3_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.650e-48 Identity = 96/193 (49.74%), Postives = 118/193 (61.14%), Query Frame = 3
Query: 174 GVTHARQAQA------SSSPAPAATRFDGTREYVSPDLLLFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATHSPREHKDLGRGVSGYDQDAWDQHKLHIVTQGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQKVRTRMIAEA 734
GV+H R S P+ +D +EY + D+ LFW+ PS F QWTPS FVV V Y CAEQ+ AEKA+LFGD Q IM PR H GR V +Q W+Q + +IV G+YAKF+QN M LL +G+KLLAEASP+D +WGIG RAD+P A PS WRG NLLG LQKVR + + A
Sbjct: 41 GVSHFRSLDINPALTPSHHPSSEGVDYDAAQEYSNSDVALFWKSPSPFCQWTPSTFVVGGVSYVCAEQFFAAEKARLFGDRECLQNIMRVSDPRLHTQYGRAVRNSNQTLWEQERENIVLTGSYAKFSQNPEMRLHLLGSGDKLLAEASPWDLIWGIGHRADHPDACRPSRWRGLNLLGIALQKVRQLLRSNA 233 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17448.1 >prot_Ecto-sp6_S_contig82.17448.1 ID=prot_Ecto-sp6_S_contig82.17448.1|Name=mRNA_Ecto-sp6_S_contig82.17448.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=242bp MAFQGILQFLGLTRSHPPTPTCKFPGCSRPCFIEPNGRVHDYCGVTHARQback to top mRNA from alignment at Ecto-sp6_S_contig82:541557..545235+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17448.1 ID=mRNA_Ecto-sp6_S_contig82.17448.1|Name=mRNA_Ecto-sp6_S_contig82.17448.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3679bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:541557..545235+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:541557..545235+ >mRNA_Ecto-sp6_S_contig82.17448.1 ID=mRNA_Ecto-sp6_S_contig82.17448.1|Name=mRNA_Ecto-sp6_S_contig82.17448.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:541557..545235+ (Ectocarpus species6 EcLAC_371)back to top |