mRNA_Ecto-sp6_S_contig82.17431.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: D7G182_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G182_ECTSI) HSP 1 Score: 674 bits (1740), Expect = 8.310e-243 Identity = 354/366 (96.72%), Postives = 355/366 (96.99%), Query Frame = 1
Query: 1 MLLDDQLIVDAGNTTTREKR----KAKESARSQEEKRAGALAEYFSALFDESFCSHNFKLVGSRIFSSGRFQEEEAANARDSELSFARAGSSNGSLNGSLGSSGSSSEVLPRVGSSGQMSDGERWGWFDEMEDPAGGEGGGPAPDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL 1086
M LDDQLIVDA NTTTR R AKESARSQEEKRAGALAEYFSALFDESFCSHNFKLVGSRIFSSGRFQEEEAANARDSELSFARAGSSN SLNGSLGSSGSSSEVLPRVGSSGQMSDGE WGWFDE+EDPAGGEGGGPAPDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL
Sbjct: 1 MPLDDQLIVDADNTTTRSPRTPIANAKESARSQEEKRAGALAEYFSALFDESFCSHNFKLVGSRIFSSGRFQEEEAANARDSELSFARAGSSNSSLNGSLGSSGSSSEVLPRVGSSGQMSDGEPWGWFDEIEDPAGGEGGGPAPDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL 366
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A835ZDH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH9_9STRA) HSP 1 Score: 365 bits (936), Expect = 3.010e-120 Identity = 206/353 (58.36%), Postives = 250/353 (70.82%), Query Frame = 1
Query: 100 AGALAEYF--SALFDESFCSHNFKLVGSRIFSSGRFQEEEAANARDSELSFARAGSSNGSLNGSLGSSGSSSEVLPR-VGSSGQM------------SDGERWGWFDEMEDPAGGEGGGP---------APDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL 1086
AG L ++F SA FDE+ C H++KLVGS+I+SSGRFQE+ +A D+ S +G + N L S +VL +GS G + S+ + WGWF++ E A G G AP K TP Y+LTESLS QRLW +TAG+RPRQPS+ER +FE+ W KNF +SEVDY++PL +D ++RK A+ P ++V YRATSPFGSAVSKSF+C+NCG+I+SIMVHIPKFQI+Q+GSDVHAEYLIVVGLG VTLGVWRRF EF+ LA+KL S +R QFHNALCSW CLR RQR FRCLD DYLILK FLLERFLHD VFESMSP+TVREFLGVL
Sbjct: 49 AGCLDQHFKTSAFFDETSCRHDYKLVGSKIYSSGRFQEQMKQDAEDAATSRNASGGGESTSNVELLQVLSQLQVLSESIGSGGSLGKRRGDSTLSVNSESDPWGWFEDPETDAHGGGSAQGCADTQHETAPGGGTPVKETPIYVLTESLSAQRLWHQTAGRRPRQPSQERTYFEQVWEKNFGESEVDYTKPLP-SDRRSSRKGAR----PPTRVLYRATSPFGSAVSKSFKCENCGEISSIMVHIPKFQIVQSGSDVHAEYLIVVGLGAVTLGVWRRFREFKNLANKLEGSNKRQQFHNALCSWHCLRARQRLFRCLDKDYLILKCFLLERFLHDLVFESMSPDTVREFLGVL 396
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A835YMJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ5_9STRA) HSP 1 Score: 318 bits (814), Expect = 4.930e-101 Identity = 207/429 (48.25%), Postives = 253/429 (58.97%), Query Frame = 1
Query: 55 KRKAKESARSQEEKRAGALAEYF--SALFDESFCSHNFKLVGSRIFSSGRFQE------EEAANARDSELSFARAGSSNGSLNGSLG-----------SSGSSSEVLPRVGSS-------GQMSDGERWG--WFDEMEDPAGGEGGGPAPDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQR---------------------------------------------------------LASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL 1086
++K + S + E K AG+L ++F SA FDE+ C H++KLVGS+I+SSGRFQ+ EEAA+++++ S + G + G S+ + S P + SS DG D + AGGE K TPPY+LTESLSTQ+LW +TAG+RPRQPS ER+FF +W KNF +S VDY++PLA D + RA RT ++V YRATSPFGSAVSKSF+C+NCG+I+SIMVHIPKFQI+Q GSDVHAEYLIVVGLGTVTLGVWRRF EF+ LA+KL+ S +R QFHNALCSW CLR RQR FRCLD DYLILK FLLERFLHD VFESMSP+TVREFLGVL
Sbjct: 41 RQKVRLSRAAAEGKGAGSLEQHFKSSAFFDETSCRHDYKLVGSKIYSSGRFQQQLHQDAEEAASSKNAPNSARATRARRGRVRAHRGRVLTYTPAVSSSNNTCSRESPPLDSSVVHLRGVAPADDGCLCAAACVDPQHESAGGE---------TEVKETPPYVLTESLSTQKLWHQTAGRRPRQPSSEREFFAMEWEKNFENSAVDYTKPLA-ADGSGLTDRANGRT--QTRVIYRATSPFGSAVSKSFKCENCGEISSIMVHIPKFQIVQAGSDVHAEYLIVVGLGTVTLGVWRRFREFKMFATKLALHFGLAIGCSTCGAASSTSSLHNFICSKLSAADLYLRARAGVWRRFREFKTLATKLASSSKRRQFHNALCSWHCLRARQRLFRCLDKDYLILKCFLLERFLHDLVFESMSPDTVREFLGVL 457
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A7S2G750_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G750_9STRA) HSP 1 Score: 219 bits (557), Expect = 5.600e-65 Identity = 121/244 (49.59%), Postives = 162/244 (66.39%), Query Frame = 1
Query: 364 GWFDEMEDPAGGEGGGPAPDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRD----QFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGV 1083
G FDE+ P G GP + P YIL ESLSTQ LW TAG+RP+QP +ER+ E+ +A+NF+ SE+ E +++ + ++ + +V +R SPFG V+KSFQC +C ++++MVHIPKFQI++ DVHAEYL+VVGLG VT GVWRRFS+FQRLA K+ S +D Q+ + SW+CLR R+R FRCLD DYL LK FLLERFLHD +FE SP+ + ++LGV
Sbjct: 32 GGFDEIRAPPPGRYLGPM--------SPPEYILEESLSTQALWHSTAGRRPQQPEDEREAIEKMYAQNFAKSEMTLEE-VSDDENPNKKQCCRPTVEDPVRVIHRGKSPFGHQVTKSFQCPHCTNMSAMMVHIPKFQIVERNGDVHAEYLVVVGLGHVTFGVWRRFSQFQRLAEKIMSSGNKDDEEDQYRMSKFSWQCLRRRKRLFRCLDKDYLALKCFLLERFLHDLLFECDSPSVITDYLGV 266
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: F0XVE8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE8_AURAN) HSP 1 Score: 212 bits (539), Expect = 1.100e-60 Identity = 113/220 (51.36%), Postives = 152/220 (69.09%), Query Frame = 1
Query: 439 KATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKK-RTAP----HSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGV 1083
+ TP Y+L +SL+ Q LW TAG RP QP+ ER+ FEE WA+N ++S+ E A +D+ + R+RA AP +++ R +SPFG++V+KS++CD CG++TSIM+ IPK+QI++ G HAEYL+V LG VT G+WRRF+ F L K+S++ +D + N L SWRCLR RQRWFRCLD DYL LK FLLERFLHD VFES S +FL +
Sbjct: 183 RETPDYVLEDSLANQALWHSTAGCRPAQPAHERRQFEELWAQNLANSQASGGE--ARSDSNSKRRRALVCDRAPVEVGGAQLLLRESSPFGTSVTKSWRCDCCGELTSIMIRIPKYQIVRKGGKSHAEYLVVARLGAVTFGLWRRFAHFTALHDKISKTLDKDDYQNTLWSWRCLRRRQRWFRCLDRDYLALKCFLLERFLHDAVFESASSTLFADFLEI 400
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A8J2SNU0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNU0_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.430e-55 Identity = 115/257 (44.75%), Postives = 156/257 (60.70%), Query Frame = 1
Query: 331 SSGQMSDGERWGWFDEMEDPAGGEGGGPAPDAPPVTKA-TPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEV--DYSEPLA----ETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSD-VHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFL 1077
S+ + SD WG++ + E G DA + K TP Y+L ++L Q LW TAG RP QP+ ER+ EE W+K ++S+ D+ E E D K+ R SPFG++V+KS++C+ CG++TSIMV IPK+QI+Q G + HAE+L+V LG VT G+WRR+S F+ L K++R+ RR+ + N SWRCLR RQRWFRCLD DYL LK FLLERFLHD VFE+ + + EF
Sbjct: 137 SASETSDAGGWGFYKDCEGTPGDSAY--RLDAAALEKRETPDYVLEDTLEMQALWHATAGTRPAQPAHERKRMEEIWSKQIAESQACKDFKESPQILSNEKDV---------------KILARDASPFGTSVTKSWRCECCGELTSIMVRIPKYQIVQRGKERPHAEFLVVARLGAVTFGLWRRYSHFEALNEKVTRNFRREDYSNTHWSWRCLRRRQRWFRCLDRDYLALKCFLLERFLHDLVFEAHNSSVFAEFF 376
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A482SXC2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXC2_9ARCH) HSP 1 Score: 179 bits (454), Expect = 2.580e-49 Identity = 109/264 (41.29%), Postives = 161/264 (60.98%), Query Frame = 1
Query: 361 WGWFDEMEDPAGGEG--GGPAPDAPPVTKAT---------PPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVH----YRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTG-SDVHAEYLIVVGLG---TVTLGVWRRFSEFQRLASKLS----RSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGV 1083
+GW+D+ E G E P P+ +A P YIL SL TQ+LW TAG+RP+QP +ER++FE+ WA+NF S V Y+ +ET A +K P+S++ +R SPF ++VSKSF D ++ S+ + +P ++I+++ D+HAEY++VV LG VT G+W+R S+F RLA +L RS + F N+L SW+C+ +R+RWF+ LD DYL LK FLLERF+HD +FE+ +P + FLG+
Sbjct: 47 YGWYDDFEPSPGVEKVLSAEFPHQQPLQRALTLPAPAAEPPLYILESSLETQQLWYTTAGRRPKQPEQEREYFEKLWAENFEQSSVSYNNNPSETPAG--KKSRIVDNIPYSELQGEIVFRGKSPFSNSVSKSFVGD---RVASMTLQMPYYRIVRSLLGDLHAEYMVVVTLGGNVPVTFGIWKRHSDFSRLAKELMERNMRSYEENAFKNSLLSWQCVLQRKRWFKSLDRDYLALKCFLLERFMHDLLFEAQAPKVLNRFLGL 305
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A835YTT0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT0_9STRA) HSP 1 Score: 171 bits (434), Expect = 9.210e-47 Identity = 98/224 (43.75%), Postives = 131/224 (58.48%), Query Frame = 1
Query: 430 PVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSP-FGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDV----------HAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVR 1068
P PPY+L E+L Q LW TAG+RPRQP ER FE W NF+ SEV Y EP A AAA R A++ V + SP G++VSKSF C CG + +H+ F+++Q G HAEYLI+V +G T G W+RF++F RLA+ ++R R F +L SW + RQRW RCL+ +YL +K LL+RFLHD VF+S +P+ +R
Sbjct: 61 PSLSDLPPYVLEEALPNQALWHLTAGRRPRQPPSERAHFERLWESNFAQSEVRYREPAA---AAAPRCAARR-------VLLKGPSPCLGASVSKSFLCPGCGGTAQLRLHVDGFRVVQGGGXXXDGGARCRRPHAEYLILVEVGEFTFGAWKRFTDFARLAAAIARPELRGHFRRSLVSWGAVLARQRWARCLEHEYLSVKCLLLQRFLHDLVFDSTAPSPLR 274
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: F0XW23_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW23_AURAN) HSP 1 Score: 169 bits (429), Expect = 7.120e-45 Identity = 109/251 (43.43%), Postives = 140/251 (55.78%), Query Frame = 1
Query: 361 WGWFDEMEDPAGGEGGGPAPDAPPVTKA---TPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSE----PLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQ--TGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRD-QFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGV 1083
WG+++E G G P+ + ++ P Y+L +L Q LW TAG+RP QP ER+ E NF S V Y + P AA R SPFG++V+KSFQCD CG+ TS+M+ IPKFQI++ +G D+ AEYL+V LG VT G+WRR S F L +++ D + N L SWRCL+ RQR FRCLD DYL +K FLLERFLHD VFES S FLG+
Sbjct: 141 WGFYEEE----GAHGDQPSQERLGGNRSEVEVPDYVLEATLDDQVLWHATAGQRPPQPLAERRAAEAAMRANFEKSCVAYDDGACPPCGPPPGRAA------------VPILREPSPFGTSVTKSFQCDCCGERTSLMIRIPKFQIVRERSGVDLRAEYLVVARLGGVTFGIWRRHSHFLDLQQAIAKEPDADVTYRNTLWSWRCLKRRQRLFRCLDKDYLAVKCFLLERFLHDAVFESSSSAIFSTFLGL 375
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Match: A0A7S1DAL3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAL3_CYCTE) HSP 1 Score: 146 bits (368), Expect = 3.660e-36 Identity = 104/317 (32.81%), Postives = 150/317 (47.32%), Query Frame = 1
Query: 418 PDAPPVTKATPPYILTESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPL-----------------------AETDAAA-----------------------------ARKRAKKRTAPHSK-----------------VHYRATSPFGSAVSKSFQCDNCGQ-----ITSIMVHIPKFQIIQTGSD-VHAEYLIVVGLGTV--TLGVWRRFSEFQRLASK-----------------LSRSRRRDQFH--NALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLG 1080
PD+ + P Y+L ESLS+Q+LWR TAG RP QP EER FFE+ WA+NF+ S+VDY P+ A+ D A AR + PH K VH R + FG+ VSKSF + ++ + I +++++ +A++L++ G++ T+GVW+R+S+F L+ K LS ++ D H NA+ SWR L++RQRW+RCLD YL LK FLLERFLHD +FES +P +R+F+G
Sbjct: 46 PDSEAMAVTAPTYVLEESLSSQQLWRHTAGTRPPQPVEERAFFEQMWAQNFAQSQVDYQMPVEVLTATTPISLSPFADGMFGAGNAQVDYAIGPNHVTRQQHPRSRHEEVALMRRLHDPRQARNIGIRAIQPHHKQYIVNKKIRTGSDASMTVHVRGDNVFGTTVSKSFAKSKAKNAPLEGVDTVNISIASYRVVENKKQGKYAQFLVIYREGSIRDTIGVWKRYSDFVELSRKVMEAHISCGTVLASMSPLSAAKETDVEHLPNAITSWRLLKKRQRWYRCLDAGYLSLKVFLLERFLHDILFESTTPRLLRDFVG 362 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17431.1 >prot_Ecto-sp6_S_contig82.17431.1 ID=prot_Ecto-sp6_S_contig82.17431.1|Name=mRNA_Ecto-sp6_S_contig82.17431.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=363bp MLLDDQLIVDAGNTTTREKRKAKESARSQEEKRAGALAEYFSALFDESFCback to top mRNA from alignment at Ecto-sp6_S_contig82:400536..408817- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17431.1 ID=mRNA_Ecto-sp6_S_contig82.17431.1|Name=mRNA_Ecto-sp6_S_contig82.17431.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8282bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:400536..408817- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:400536..408817- >mRNA_Ecto-sp6_S_contig82.17431.1 ID=mRNA_Ecto-sp6_S_contig82.17431.1|Name=mRNA_Ecto-sp6_S_contig82.17431.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:400536..408817- (Ectocarpus species6 EcLAC_371)back to top |