mRNA_Ecto-sp6_S_contig82.17415.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 5.190e-192 Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 1
Query: 118 QQQASSALGLGTVNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
+QQASSALGLG VNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFE YSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ
Sbjct: 19 EQQASSALGLGAVNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEGYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 303
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: R1B9S2_EMIHU (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B9S2_EMIHU) HSP 1 Score: 349 bits (895), Expect = 7.030e-111 Identity = 167/227 (73.57%), Postives = 191/227 (84.14%), Query Frame = 1
Query: 292 IKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
I W+ + L +FG E + + Y +SK D LKGYEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPA++AD++ GDK +SYYREHTHALA GV +M EL+AKDGGTCRG GGSMH+YDK+T+FQGGWALV EQ+ YAAGAARSIL+DRQLDP+G KDDDR+ +VF+GEG AQNGRMAE LNAAAKE LPLLF+VIDNGRAINTFTPDVAAN+DVF Q
Sbjct: 74 IDWSNLRARLEVEFGFKEEELKQYDDVSKADLLKGYEMMQLCRQFENACNQAYMQGHIRGFMHLDNGQEAIPALIADAIKPGDKAVSYYREHTHALAKGVSPDAIMAELWAKDGGTCRGTGGSMHIYDKETNFQGGWALVCEQLPYAAGAARSILLDRQLDPDGTKDDDRIAVVFVGEGGAQNGRMAECLNAAAKENLPLLFIVIDNGRAINTFTPDVAANNDVFEQ 300
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A836C8J1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J1_9STRA) HSP 1 Score: 347 bits (890), Expect = 8.190e-111 Identity = 169/233 (72.53%), Postives = 196/233 (84.12%), Query Frame = 1
Query: 274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
MRPP+++ W +V + L DFG+ K +Y ++SKED LK Y MMQL RQFENAC QAYMQ +RGFMHLDNGQE IPA VAD++ DKK SYYREHTHALASGV +VM ELFAK+GGTC+GAGGSMH+YDK+T+FQGGWALVAEQ+ YA GAARSIL+DR LDP G ++DDR+TIVF+GEG AQNGRMAE LNAAAKEKLP++FLVIDNGRAINTFTPDVAANSDV+ Q
Sbjct: 1 MRPPTDVTWKDVKEQLKSDFGIKNVK--EYDSVSKEDLLKAYHMMQLSRQFENACTQAYMQQHVRGFMHLDNGQESIPAFVADAIRPDDKKYSYYREHTHALASGVPPEKVMAELFAKEGGTCKGAGGSMHIYDKETNFQGGWALVAEQLPYAVGAARSILLDRHLDPAGTRNDDRVTIVFVGEGGAQNGRMAECLNAAAKEKLPIIFLVIDNGRAINTFTPDVAANSDVYLQ 231
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A0M0JRY3_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRY3_9EUKA) HSP 1 Score: 348 bits (894), Expect = 1.460e-110 Identity = 170/233 (72.96%), Postives = 191/233 (81.97%), Query Frame = 1
Query: 274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
MRP I W+ + L DFG+ E + Y I K D LK YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPAM+AD+L GD K SYYREHTHALASGVDAG +M ELFAKD GTCRG GGSMH+YDK+T+FQGGWALV+EQ+ YAAGAARSIL+DR L+PE K DDR+++VF+GEG AQNGRMAE LNAAAKE LP+LFL+IDNGRAINTFT DVAAN D+F Q
Sbjct: 85 MRPRPNIDWSNLRAKLELDFGIPEETLKKYDTIEKGDMLKAYEMMQLCRQFENACNQAYMQGFIRGFMHLDNGQETIPAMIADTLKKGDIKYSYYREHTHALASGVDAGAIMAELFAKDTGTCRGTGGSMHIYDKETNFQGGWALVSEQLPYAAGAARSILLDRHLEPEKFKGDDRISVVFIGEGGAQNGRMAECLNAAAKENLPMLFLIIDNGRAINTFTEDVAANMDIFKQ 317
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S4M2W8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2W8_9EUKA) HSP 1 Score: 327 bits (839), Expect = 6.850e-109 Identity = 166/235 (70.64%), Postives = 183/235 (77.87%), Query Frame = 1
Query: 274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLD--PEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
MRP I W+ + L +F + E Y A+S ED + YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPA VAD++ GD K SYYREHTHALAS VD G +M ELFAKD GTCRG GGSMH+YDKDTHFQGGWALV+EQ+ YA GAARSIL+DR L PEG DDR+ IVF GEG +QNGRMAE LNAAAKE LP+LF+ IDNGRAINTFTPDVA NSDVF Q
Sbjct: 1 MRPRPSIDWSNLRARLEVEFKIPEETLAKYDAVSSEDLFEAYEMMQLCRQFENACNQAYMQGHIRGFMHLDNGQETIPAFVADTIKKGDIKYSYYREHTHALASKVDPGAIMAELFAKDTGTCRGTGGSMHIYDKDTHFQGGWALVSEQLPYAVGAARSILLDRHLGIAPEG---DDRMAIVFCGEGGSQNGRMAECLNAAAKESLPILFVCIDNGRAINTFTPDVAQNSDVFLQ 232
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A6T7SKE6_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A6T7SKE6_9EUKA) HSP 1 Score: 335 bits (858), Expect = 2.530e-105 Identity = 170/270 (62.96%), Postives = 201/270 (74.44%), Query Frame = 1
Query: 163 RRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
+R A A +R+ G E P + + MRP +I+W ++ L +FG+++S + Y I ++ L YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPAM+AD + D K SYYREHTHALASG+D G +M ELFAKD GTCRG GGSMH+YD DTHFQGGWALV+EQ+ YAAGAARSIL+DR+L + + DDR+T+VF GEG +QNGRMAETLNAAAKE LPLLF+VIDNGRAINTFT DVA NSDVF Q
Sbjct: 39 QRAAVAANIRMNAAGGTETVDFTGGKIRPQRDVVDDQMRPRPDIEWLQLRQRLETEFGINDSDLKKYDEIPEDAVLAAYEMMQLCRQFENACNQAYMQGNIRGFMHLDNGQESIPAMLADFINKDDIKYSYYREHTHALASGIDPGAIMAELFAKDTGTCRGTGGSMHIYDVDTHFQGGWALVSEQLPYAAGAARSILLDRELG-QAKEGDDRMTVVFCGEGGSQNGRMAETLNAAAKENLPLLFVVIDNGRAINTFTQDVAKNSDVFLQ 307
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: L1J1I5_GUITC (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J1I5_GUITC) HSP 1 Score: 332 bits (850), Expect = 1.130e-104 Identity = 167/237 (70.46%), Postives = 188/237 (79.32%), Query Frame = 1
Query: 262 EQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
E +VMRP W E + LV FG ++ + Y+ ISKED + Y MM L RQFE ACNQ YM+G IRGFMHLDNGQE IPA+VADS+ GDKK SYYREH HALASGVDAG VM ELF K GGTC+GAGGSMH+YDK T+FQGGWALV+EQ+ YAAGAARSIL+DR L PE KDDDR+++VF+GEG AQNGRMAE LNAAAKE LPLLF+VIDNGRAINTFT DVA N DVF Q
Sbjct: 13 EGQVMRPRFLNSWEESKEALVGRFGFSPNEVDQYAEISKEDLVHAYGMMLLSRQFETACNQEYMKGNIRGFMHLDNGQESIPALVADSIKKGDKKYSYYREHAHALASGVDAGAVMAELFGKIGGTCKGAGGSMHIYDKATNFQGGWALVSEQLPYAAGAARSILLDRMLHPEQHKDDDRISVVFIGEGGAQNGRMAECLNAAAKENLPLLFIVIDNGRAINTFTGDVAKNQDVFLQ 249
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S0VUT6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUT6_9CRYP) HSP 1 Score: 323 bits (827), Expect = 1.150e-104 Identity = 158/223 (70.85%), Postives = 182/223 (81.61%), Query Frame = 1
Query: 298 WAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVF 966
W + + VK+FGV + + ISKED LKGY MMQL R FENACNQAYMQG IRGFMHLDNGQE IPAM+ D+ DKK SYYREHTHALASG+D G +M EL+ K+GGTC+G GGSMH+YD +T+FQGGWALV+EQ+AYA GAARSILMDR PE KDD R+T+VF+GEG AQNGRMAE LNAAAKEKLP+LFLVIDNGRAINTFTPDVA N+D++
Sbjct: 116 WTSIKEEFVKNFGV---SADQWDLISKEDLLKGYGMMQLSRLFENACNQAYMQGHIRGFMHLDNGQESIPAMIYDTQTKDDKKHSYYREHTHALASGIDPGAIMAELWMKEGGTCKGTGGSMHIYDVETNFQGGWALVSEQLAYATGAARSILMDRLNYPEQYKDDKRMTVVFVGEGGAQNGRMAECLNAAAKEKLPILFLVIDNGRAINTFTPDVATNNDIY 335
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S2V5P9_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P9_9STRA) HSP 1 Score: 332 bits (850), Expect = 6.650e-104 Identity = 164/246 (66.67%), Postives = 195/246 (79.27%), Query Frame = 1
Query: 235 TVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
TVA P + ++ MRP E W ++ L + FG +E++ DY+++SK++ K Y+MM CR FENACN YMQG IRGFMHLDNGQE IPA+VA+S+ GD K SYYR+HTHALASGVD G VM ELF KDGGTCRGAGGSMH+YDK+T+FQGGWALVAEQ+ YA GAARSI +DR LDP G + DDR+++VF GEG +QNGRMAE LNAAAKE LP+LFL IDNGRAINTFTPDVA NSDV+ Q
Sbjct: 87 TVATP--DNKKGPMRPRIETPWEDLKAVLTQSFGYNEAQLNDYASLSKDELKKVYDMMVYCRDFENACNVQYMQGNIRGFMHLDNGQEAIPALVANSIKKGDTKYSYYRDHTHALASGVDGGAVMAELFGKDGGTCRGAGGSMHIYDKETNFQGGWALVAEQLPYAVGAARSIKLDRILDPVGHQGDDRISVVFCGEGGSQNGRMAECLNAAAKEDLPVLFLTIDNGRAINTFTPDVAKNSDVYLQ 330
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: W7TYT3_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYT3_9STRA) HSP 1 Score: 330 bits (846), Expect = 2.230e-103 Identity = 166/232 (71.55%), Postives = 188/232 (81.03%), Query Frame = 1
Query: 274 MRP-PSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVF 966
MRP P ++ W +V L FG+ E+ Y + K D LK Y MM++ RQFENACNQAYMQGKIRGFMHLDNGQE IPA+V+D++ GD K SYYREHTHALASGV A VM ELFAK GTC+GAGGSMH+YD +FQGGWALV+EQ+ YA GAARSIL+DR+LD EG KDDDR+TIVF+GEG AQNGRMAE LNAAAKE LP+LFLVIDNGRAINTFTPDVAANSDVF
Sbjct: 86 MRPRPEDLGWEQVKAQLNTAFGLTENSLGKYDTVGKADLLKAYTMMEVSRQFENACNQAYMQGKIRGFMHLDNGQESIPALVSDAIKAGDIKHSYYREHTHALASGVPAENVMAELFAKVDGTCKGAGGSMHIYDVSKNFQGGWALVSEQLPYAVGAARSILLDRELDTEGKKDDDRITIVFIGEGGAQNGRMAECLNAAAKEGLPILFLVIDNGRAINTFTPDVAANSDVF 317 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig82.17415.1 >prot_Ecto-sp6_S_contig82.17415.1 ID=prot_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=325bp MLARATAVLAALHALDTPPRQTHAFVPSTLPLRAARGATQQQASSALGLGback to top mRNA from alignment at Ecto-sp6_S_contig82:148286..151871- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig82.17415.1 ID=mRNA_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3586bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:148286..151871- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:148286..151871- >mRNA_Ecto-sp6_S_contig82.17415.1 ID=mRNA_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:148286..151871- (Ectocarpus species6 EcLAC_371)back to top |