mRNA_Ecto-sp6_S_contig82.17415.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig82.17415.1
Unique NamemRNA_Ecto-sp6_S_contig82.17415.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI)

HSP 1 Score: 557 bits (1436), Expect = 5.190e-192
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 1
Query:  118 QQQASSALGLGTVNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            +QQASSALGLG VNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFE YSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ
Sbjct:   19 EQQASSALGLGAVNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEGYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 303          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: R1B9S2_EMIHU (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B9S2_EMIHU)

HSP 1 Score: 349 bits (895), Expect = 7.030e-111
Identity = 167/227 (73.57%), Postives = 191/227 (84.14%), Query Frame = 1
Query:  292 IKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            I W+ +   L  +FG  E + + Y  +SK D LKGYEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPA++AD++  GDK +SYYREHTHALA GV    +M EL+AKDGGTCRG GGSMH+YDK+T+FQGGWALV EQ+ YAAGAARSIL+DRQLDP+G KDDDR+ +VF+GEG AQNGRMAE LNAAAKE LPLLF+VIDNGRAINTFTPDVAAN+DVF Q
Sbjct:   74 IDWSNLRARLEVEFGFKEEELKQYDDVSKADLLKGYEMMQLCRQFENACNQAYMQGHIRGFMHLDNGQEAIPALIADAIKPGDKAVSYYREHTHALAKGVSPDAIMAELWAKDGGTCRGTGGSMHIYDKETNFQGGWALVCEQLPYAAGAARSILLDRQLDPDGTKDDDRIAVVFVGEGGAQNGRMAECLNAAAKENLPLLFIVIDNGRAINTFTPDVAANNDVFEQ 300          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A836C8J1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J1_9STRA)

HSP 1 Score: 347 bits (890), Expect = 8.190e-111
Identity = 169/233 (72.53%), Postives = 196/233 (84.12%), Query Frame = 1
Query:  274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            MRPP+++ W +V + L  DFG+   K  +Y ++SKED LK Y MMQL RQFENAC QAYMQ  +RGFMHLDNGQE IPA VAD++   DKK SYYREHTHALASGV   +VM ELFAK+GGTC+GAGGSMH+YDK+T+FQGGWALVAEQ+ YA GAARSIL+DR LDP G ++DDR+TIVF+GEG AQNGRMAE LNAAAKEKLP++FLVIDNGRAINTFTPDVAANSDV+ Q
Sbjct:    1 MRPPTDVTWKDVKEQLKSDFGIKNVK--EYDSVSKEDLLKAYHMMQLSRQFENACTQAYMQQHVRGFMHLDNGQESIPAFVADAIRPDDKKYSYYREHTHALASGVPPEKVMAELFAKEGGTCKGAGGSMHIYDKETNFQGGWALVAEQLPYAVGAARSILLDRHLDPAGTRNDDRVTIVFVGEGGAQNGRMAECLNAAAKEKLPIIFLVIDNGRAINTFTPDVAANSDVYLQ 231          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A0M0JRY3_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRY3_9EUKA)

HSP 1 Score: 348 bits (894), Expect = 1.460e-110
Identity = 170/233 (72.96%), Postives = 191/233 (81.97%), Query Frame = 1
Query:  274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            MRP   I W+ +   L  DFG+ E   + Y  I K D LK YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPAM+AD+L  GD K SYYREHTHALASGVDAG +M ELFAKD GTCRG GGSMH+YDK+T+FQGGWALV+EQ+ YAAGAARSIL+DR L+PE  K DDR+++VF+GEG AQNGRMAE LNAAAKE LP+LFL+IDNGRAINTFT DVAAN D+F Q
Sbjct:   85 MRPRPNIDWSNLRAKLELDFGIPEETLKKYDTIEKGDMLKAYEMMQLCRQFENACNQAYMQGFIRGFMHLDNGQETIPAMIADTLKKGDIKYSYYREHTHALASGVDAGAIMAELFAKDTGTCRGTGGSMHIYDKETNFQGGWALVSEQLPYAAGAARSILLDRHLEPEKFKGDDRISVVFIGEGGAQNGRMAECLNAAAKENLPMLFLIIDNGRAINTFTEDVAANMDIFKQ 317          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S4M2W8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2W8_9EUKA)

HSP 1 Score: 327 bits (839), Expect = 6.850e-109
Identity = 166/235 (70.64%), Postives = 183/235 (77.87%), Query Frame = 1
Query:  274 MRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLD--PEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            MRP   I W+ +   L  +F + E     Y A+S ED  + YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPA VAD++  GD K SYYREHTHALAS VD G +M ELFAKD GTCRG GGSMH+YDKDTHFQGGWALV+EQ+ YA GAARSIL+DR L   PEG   DDR+ IVF GEG +QNGRMAE LNAAAKE LP+LF+ IDNGRAINTFTPDVA NSDVF Q
Sbjct:    1 MRPRPSIDWSNLRARLEVEFKIPEETLAKYDAVSSEDLFEAYEMMQLCRQFENACNQAYMQGHIRGFMHLDNGQETIPAFVADTIKKGDIKYSYYREHTHALASKVDPGAIMAELFAKDTGTCRGTGGSMHIYDKDTHFQGGWALVSEQLPYAVGAARSILLDRHLGIAPEG---DDRMAIVFCGEGGSQNGRMAECLNAAAKESLPILFVCIDNGRAINTFTPDVAQNSDVFLQ 232          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A6T7SKE6_9EUKA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A6T7SKE6_9EUKA)

HSP 1 Score: 335 bits (858), Expect = 2.530e-105
Identity = 170/270 (62.96%), Postives = 201/270 (74.44%), Query Frame = 1
Query:  163 RRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            +R A A  +R+    G E          P  +   + MRP  +I+W ++   L  +FG+++S  + Y  I ++  L  YEMMQLCRQFENACNQAYMQG IRGFMHLDNGQE IPAM+AD +   D K SYYREHTHALASG+D G +M ELFAKD GTCRG GGSMH+YD DTHFQGGWALV+EQ+ YAAGAARSIL+DR+L  +  + DDR+T+VF GEG +QNGRMAETLNAAAKE LPLLF+VIDNGRAINTFT DVA NSDVF Q
Sbjct:   39 QRAAVAANIRMNAAGGTETVDFTGGKIRPQRDVVDDQMRPRPDIEWLQLRQRLETEFGINDSDLKKYDEIPEDAVLAAYEMMQLCRQFENACNQAYMQGNIRGFMHLDNGQESIPAMLADFINKDDIKYSYYREHTHALASGIDPGAIMAELFAKDTGTCRGTGGSMHIYDVDTHFQGGWALVSEQLPYAAGAARSILLDRELG-QAKEGDDRMTVVFCGEGGSQNGRMAETLNAAAKENLPLLFVVIDNGRAINTFTQDVAKNSDVFLQ 307          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: L1J1I5_GUITC (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J1I5_GUITC)

HSP 1 Score: 332 bits (850), Expect = 1.130e-104
Identity = 167/237 (70.46%), Postives = 188/237 (79.32%), Query Frame = 1
Query:  262 EQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            E +VMRP     W E  + LV  FG   ++ + Y+ ISKED +  Y MM L RQFE ACNQ YM+G IRGFMHLDNGQE IPA+VADS+  GDKK SYYREH HALASGVDAG VM ELF K GGTC+GAGGSMH+YDK T+FQGGWALV+EQ+ YAAGAARSIL+DR L PE  KDDDR+++VF+GEG AQNGRMAE LNAAAKE LPLLF+VIDNGRAINTFT DVA N DVF Q
Sbjct:   13 EGQVMRPRFLNSWEESKEALVGRFGFSPNEVDQYAEISKEDLVHAYGMMLLSRQFETACNQEYMKGNIRGFMHLDNGQESIPALVADSIKKGDKKYSYYREHAHALASGVDAGAVMAELFGKIGGTCKGAGGSMHIYDKATNFQGGWALVSEQLPYAAGAARSILLDRMLHPEQHKDDDRISVVFIGEGGAQNGRMAECLNAAAKENLPLLFIVIDNGRAINTFTGDVAKNQDVFLQ 249          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S0VUT6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUT6_9CRYP)

HSP 1 Score: 323 bits (827), Expect = 1.150e-104
Identity = 158/223 (70.85%), Postives = 182/223 (81.61%), Query Frame = 1
Query:  298 WAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVF 966
            W  + +  VK+FGV     + +  ISKED LKGY MMQL R FENACNQAYMQG IRGFMHLDNGQE IPAM+ D+    DKK SYYREHTHALASG+D G +M EL+ K+GGTC+G GGSMH+YD +T+FQGGWALV+EQ+AYA GAARSILMDR   PE  KDD R+T+VF+GEG AQNGRMAE LNAAAKEKLP+LFLVIDNGRAINTFTPDVA N+D++
Sbjct:  116 WTSIKEEFVKNFGV---SADQWDLISKEDLLKGYGMMQLSRLFENACNQAYMQGHIRGFMHLDNGQESIPAMIYDTQTKDDKKHSYYREHTHALASGIDPGAIMAELWMKEGGTCKGTGGSMHIYDVETNFQGGWALVSEQLAYATGAARSILMDRLNYPEQYKDDKRMTVVFVGEGGAQNGRMAECLNAAAKEKLPILFLVIDNGRAINTFTPDVATNNDIY 335          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: A0A7S2V5P9_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P9_9STRA)

HSP 1 Score: 332 bits (850), Expect = 6.650e-104
Identity = 164/246 (66.67%), Postives = 195/246 (79.27%), Query Frame = 1
Query:  235 TVAPPATEQEQEVMRPPSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQ 972
            TVA P  + ++  MRP  E  W ++   L + FG +E++  DY+++SK++  K Y+MM  CR FENACN  YMQG IRGFMHLDNGQE IPA+VA+S+  GD K SYYR+HTHALASGVD G VM ELF KDGGTCRGAGGSMH+YDK+T+FQGGWALVAEQ+ YA GAARSI +DR LDP G + DDR+++VF GEG +QNGRMAE LNAAAKE LP+LFL IDNGRAINTFTPDVA NSDV+ Q
Sbjct:   87 TVATP--DNKKGPMRPRIETPWEDLKAVLTQSFGYNEAQLNDYASLSKDELKKVYDMMVYCRDFENACNVQYMQGNIRGFMHLDNGQEAIPALVANSIKKGDTKYSYYRDHTHALASGVDGGAVMAELFGKDGGTCRGAGGSMHIYDKETNFQGGWALVAEQLPYAVGAARSIKLDRILDPVGHQGDDRISVVFCGEGGSQNGRMAECLNAAAKEDLPVLFLTIDNGRAINTFTPDVAKNSDVYLQ 330          
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Match: W7TYT3_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYT3_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.230e-103
Identity = 166/232 (71.55%), Postives = 188/232 (81.03%), Query Frame = 1
Query:  274 MRP-PSEIKWAEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFLVIDNGRAINTFTPDVAANSDVF 966
            MRP P ++ W +V   L   FG+ E+    Y  + K D LK Y MM++ RQFENACNQAYMQGKIRGFMHLDNGQE IPA+V+D++  GD K SYYREHTHALASGV A  VM ELFAK  GTC+GAGGSMH+YD   +FQGGWALV+EQ+ YA GAARSIL+DR+LD EG KDDDR+TIVF+GEG AQNGRMAE LNAAAKE LP+LFLVIDNGRAINTFTPDVAANSDVF
Sbjct:   86 MRPRPEDLGWEQVKAQLNTAFGLTENSLGKYDTVGKADLLKAYTMMEVSRQFENACNQAYMQGKIRGFMHLDNGQESIPALVSDAIKAGDIKHSYYREHTHALASGVPAENVMAELFAKVDGTCKGAGGSMHIYDVSKNFQGGWALVSEQLPYAVGAARSILLDRELDTEGKKDDDRITIVFIGEGGAQNGRMAECLNAAAKEGLPILFLVIDNGRAINTFTPDVAANSDVF 317          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEK3_ECTSI5.190e-19298.95Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
R1B9S2_EMIHU7.030e-11173.57Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A836C8J1_9STRA8.190e-11172.53Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A0M0JRY3_9EUKA1.460e-11072.96Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S4M2W8_9EUKA6.850e-10970.64Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A6T7SKE6_9EUKA2.530e-10562.96Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
L1J1I5_GUITC1.130e-10470.46Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A7S0VUT6_9CRYP1.150e-10470.85Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2V5P9_9STRA6.650e-10466.67Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
W7TYT3_9STRA2.230e-10371.55Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:148286..151871 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score559.7
Seed ortholog evalue9e-157
Seed eggNOG ortholog2880.D8LEK3
Preferred nameodpA
Model size976
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00161
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230
KEGG ModuleM00307
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons6
EggNOG free text desc.pyruvate dehydrogenase (acetyl-transferring) activity
EggNOG OGsCOG0022@1,COG0462@1,KOG0225@2759,KOG0524@2759
Ec32 ortholog descriptionpyruvate dehydrogenase
Ec32 orthologEc-23_002710.1
EC1.2.4.1
Cds size975
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17415.1prot_Ecto-sp6_S_contig82.17415.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig82 148286..151871 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350454.9361548-CDS-Ecto-sp6_S_contig82:148285..1484601682350454.9361548-CDS-Ecto-sp6_S_contig82:148285..148460Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 148286..148460 -
1682350454.95298-CDS-Ecto-sp6_S_contig82:148847..1489541682350454.95298-CDS-Ecto-sp6_S_contig82:148847..148954Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 148848..148954 -
1682350454.9615438-CDS-Ecto-sp6_S_contig82:149380..1495781682350454.9615438-CDS-Ecto-sp6_S_contig82:149380..149578Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 149381..149578 -
1682350454.9696512-CDS-Ecto-sp6_S_contig82:150071..1502601682350454.9696512-CDS-Ecto-sp6_S_contig82:150071..150260Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 150072..150260 -
1682350454.9776335-CDS-Ecto-sp6_S_contig82:151182..1513241682350454.9776335-CDS-Ecto-sp6_S_contig82:151182..151324Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 151183..151324 -
1682350454.9852588-CDS-Ecto-sp6_S_contig82:151707..1518711682350454.9852588-CDS-Ecto-sp6_S_contig82:151707..151871Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 151708..151871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig82.17415.1

>prot_Ecto-sp6_S_contig82.17415.1 ID=prot_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=325bp
MLARATAVLAALHALDTPPRQTHAFVPSTLPLRAARGATQQQASSALGLG
TVNARRHAAAPTMRVERGAGGEVGPLKATVAPPATEQEQEVMRPPSEIKW
AEVWDTLVKDFGVDESKFEDYSAISKEDQLKGYEMMQLCRQFENACNQAY
MQGKIRGFMHLDNGQEGIPAMVADSLGNGDKKMSYYREHTHALASGVDAG
RVMGELFAKDGGTCRGAGGSMHVYDKDTHFQGGWALVAEQIAYAAGAARS
ILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAAAKEKLPLLFL
VIDNGRAINTFTPDVAANSDVFAQA
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mRNA from alignment at Ecto-sp6_S_contig82:148286..151871-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig82.17415.1 ID=mRNA_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3586bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:148286..151871- (Ectocarpus species6 EcLAC_371)
ATGTTGGCCAGGGCTACCGCCGTCCTGGCGGCATTGCATGCATTGGATAC GCCGCCGCGACAAACGCACGCGTTCGTACCCTCGACGCTACCTCTCCGGG CTGCTCGTGGTGCCACGCAGCAGCAGGCCTCCTCTGCTCTCGGCCTTGGG ACGGTGAACGCCAGGTTAGAGAGAGAGGGAGAACTTGTGTCTAGAAGTGT GTCGGCAGCAGCAGTGCTCAATGCAAACGTGTGTGTGGCAGGGAACGGGG TGTGCGTGCCATGGAAAAACTGTCAACGATGCGCGTTGTTCTGGCTAGTC GAGATGCAGGTCTGCTGGGCAGTCAAAACGCTGCTGGCTGTGGAAATGTG TTCCGAAGGCATGTACATAAAACGGAGATAAACTCCCTTTTTCTATCGGT GCCTCTCTTGCTGTTTCGGCTGCTCATGGCACAGGTAGTAGCCGTACCTG CGCCCCACATAGTATAGCTTTGCTGCTGTCGTCCTCCAACAACTGCAGTC GCGCATGTAAACCTCACCCCACTTGCTGCCGGTGCGGGCGCCGTCAGGAG GCATGCAGCTGCACCGACCATGCGCGTGGAGCGGGGTGCCGGCGGGGAAG TGGGTCCGCTCAAGGCGACCGTCGCGCCACCCGCTACGGAGCAGGAACAA GAGGTTATGCGGCCCCCATCCGAAATCAAGTGGGCAGAGGTGGGGGAAGT GTTTGTGGCCCTGTGCTTGCACCAATACATCACTGCTGTTCTGCAAAGTG CAAACACAGCAGTCTAGGTTGCTGTGGTTGGTACACAGCATTGTTCACAT GCAGACTAAGAGTACATTTACATTTGCATACACTGCAGAAGGAGAGTATA TTCTCCCGCAGGTGTCGTTGAACTTGACACAAAAGTTTTCATCTGTGGAA GAAGAGCACGAAACTTGTTGCGTTTTTGTACGAAAAAAAAGCTAGACTCT CCGGGTCAGGATCCGGGTTCTCGCCTCGAGAGGGAGTACCGGTGGATGAC ATAAATATTCCACACCCCAGGAGCGATTTACAAAGCTCGATGACCCCACG GTGAAGAGGATACATTAATTAGAATCGATACGTTTTCGGAAAGCTCTCGA CAAGGCAGCTTCAACGCCGCCGATTTTGGCGCTGCCGCGCTTTATTGGTG TGGAGATACGAGCTGTAAAAAGAATTTCAGGGGGGGTGGTGTCTTGTGTC ACCGACGGTAGCCTGGTGTACAGGTTTTATGAACACTCTCCCAAATCGAG AGGAAACTGCCCCTGTGCAGATTGCAGTTTCTGGTTGACGAGATGATTTT TCACCCTACTCGTTTCGCCGGCAGAATGTTGCTCCCCAGGCAAGATAATG ATCGCTCGCTGTTCACCCCGAGATTTTTCAGGAAAATAACGTGTGAAGCC TTTTGTAGTTAGTCTACCCGTTCGAGATGCGACCACAAGCAGTCGAAGGG AATGTGTTGAAAGCCTTTACAGTGAGTGGAGGGAAACCGGCTGGGTACTG GACTTATTTCGAGTCTGTTTTGATCCTGTACATTTTTAGTGAAAGTGCAC ACCGCCGATCCGTAACTGTCAAACGCACGGTCTGTGTGCTGTTGTTGCTG TGTTTTTTAAGGTGTGGGACACTCTGGTGAAGGACTTCGGCGTGGACGAG TCCAAGTTCGAGGACTACTCGGCCATCTCTAAGGAGGACCAGCTCAAGGG GTACGAGATGATGCAGCTGTGCCGCCAGTTCGAGAACGCGTGCAACCAGG CCTACATGCAGGGGAAGATCAGGGGCTTCATGCACCTCGACAACGGCCAG GTTCGTGCCCATCCAACAGTCTACAGCAGTGCGCAGGTTTTTCTTAGGTA AGCAAACATACTGGATAACGTATAGAAATGGCTAGGTTAGGGCCAGGGTC ATCTGCGTGCCCCCTGCCTAGTCGTTTTTCGGAATATAATTATCTTCTTG GCGTAGGCAGTCCTACGGTCCATCTCCTTTGCCCATTTTTTGTGTGTCGT GAACGCTGTTCCTGGCTGGTAATTGGTAACGTAGTGCCGCGCAAGAGTTT TGGCCCCGCCCTGAAAAAACAACAGCATTGCAAACCCAGTTTTCTCAAAG CCGGAAAGGGCGTTGCTGTAAAATAGTAGCGTCAAGCACGTCGAAGCACG ACCATTCTCACGCTGAGCGCCACCAACGGTACAACACGGGAAACACGAAG CGACCCCTGAACCAACACCCCCCCATCCTTTTTCGCCGACCTCTCGAACC TCCTCTTTTCATCTCGAAAAAAAAAACTTCCGTTTATCTTCAGGAGGGCA TCCCGGCCATGGTTGCCGACAGTCTCGGCAACGGCGACAAGAAGATGAGC TACTACCGGGAGCACACGCATGCTCTGGCCAGCGGGGTGGACGCCGGGCG CGTGATGGGGGAGCTGTTCGCGAAGGACGGCGGCACCTGCAGGGGGGCGG GTGGCTCGATGCACGTCTACGACAAGGACACGCACTTTCAGGTCGGATCG GATGAGATTTGTCTGGTCTGCAAGATTTGGTGCCGGCAAAGGTTTTTTTT TTTGTTAGGGCGGGGCTTATCGTGGCGAAATGGTCTTCACGGCATGAATG TACGGTGGTGGGGGTTGTAAGGAATGTTGTTGTACAGTATATGTTGAAAG GTCATGGTGGTGAATGTTGGCCGTGGGTAACGTGGCACATGAATGTCTGG GTCCCCGTGAATGCGCCCCGACAGGCGGCGCACATCCCCCCCCCACCAAG TTCTTTGTTGGAGGTTCATCTCTTTACGAAGATACACCAAGGTCTTTGTT GGAGGTTCATCTCCTTACGAATATACTTGATATTCCTTCGTTTTTTTTCG TTTGTTCCTGGTCTCCTCTGACCGCTGTCTTTTTTTTGTTTTTTTGGTCC AACAAACTTTTTGACAGGGAGGTTGGGCCTTGGTGGCAGAGCAGATCGCG TACGCGGCCGGCGCCGCCCGATCCATCCTCATGGACAGGCAGCTTGACCC TGAGGGAATGAAGGACGATGACCGGTAAGTCACCACGCCACCCGGGGTGT GCAGTGTGTGTAACTGGGTGGTGGCATCGCCTTAGGTATGGTGGGGTGCG CGGAAGGGGTACCTCCCGCCAAGTCGGACAAGCCTAGAGGTGCATGAGGA AAAGGCTGAATTCTTGGAGGAGATTGTCGAGATGTGTGTCTAGTAGTGTT TTTTAGCCCGGGGGAGGCGGGGACGAGAGCGGTAAGACTTTCTCAAAGCA CGTCATCGCTGGGGGATTTTCATGGGGCGGAGGACGGCGGCGGTTGGATG ATGCCGAGCCGTACTTGCCTGCCGTGGTTGTGAACAACTTCAGAACAACA CAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTCGTTTTTTATCTT TTTCGTTTCAGGCTTACCATCGTGTTTCTCGGGGAGGGGGCGGCGCAGAA CGGCCGCATGGCGGAGACCCTCAACGCCGCCGCGAAGGAGAAGCTTCCGC TGCTCTTCCTCGTGATCGATAACGGCCGCGCCATCAACACCTTCACGCCC GACGTGGCCGCAAACTCGGACGTTTTCGCGCAGGCA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:148286..151871-

>mRNA_Ecto-sp6_S_contig82.17415.1 ID=mRNA_Ecto-sp6_S_contig82.17415.1|Name=mRNA_Ecto-sp6_S_contig82.17415.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:148286..151871- (Ectocarpus species6 EcLAC_371)
ATGTTGGCCAGGGCTACCGCCGTCCTGGCGGCATTGCATGCATTGGATAC
GCCGCCGCGACAAACGCACGCGTTCGTACCCTCGACGCTACCTCTCCGGG
CTGCTCGTGGTGCCACGCAGCAGCAGGCCTCCTCTGCTCTCGGCCTTGGG
ACGGTGAACGCCAGGAGGCATGCAGCTGCACCGACCATGCGCGTGGAGCG
GGGTGCCGGCGGGGAAGTGGGTCCGCTCAAGGCGACCGTCGCGCCACCCG
CTACGGAGCAGGAACAAGAGGTTATGCGGCCCCCATCCGAAATCAAGTGG
GCAGAGGTGTGGGACACTCTGGTGAAGGACTTCGGCGTGGACGAGTCCAA
GTTCGAGGACTACTCGGCCATCTCTAAGGAGGACCAGCTCAAGGGGTACG
AGATGATGCAGCTGTGCCGCCAGTTCGAGAACGCGTGCAACCAGGCCTAC
ATGCAGGGGAAGATCAGGGGCTTCATGCACCTCGACAACGGCCAGGAGGG
CATCCCGGCCATGGTTGCCGACAGTCTCGGCAACGGCGACAAGAAGATGA
GCTACTACCGGGAGCACACGCATGCTCTGGCCAGCGGGGTGGACGCCGGG
CGCGTGATGGGGGAGCTGTTCGCGAAGGACGGCGGCACCTGCAGGGGGGC
GGGTGGCTCGATGCACGTCTACGACAAGGACACGCACTTTCAGGGAGGTT
GGGCCTTGGTGGCAGAGCAGATCGCGTACGCGGCCGGCGCCGCCCGATCC
ATCCTCATGGACAGGCAGCTTGACCCTGAGGGAATGAAGGACGATGACCG
GCTTACCATCGTGTTTCTCGGGGAGGGGGCGGCGCAGAACGGCCGCATGG
CGGAGACCCTCAACGCCGCCGCGAAGGAGAAGCTTCCGCTGCTCTTCCTC
GTGATCGATAACGGCCGCGCCATCAACACCTTCACGCCCGACGTGGCCGC
AAACTCGGACGTTTTCGCGCAGGCA
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